Yun Lyna Luo - Publications

Affiliations: 
Western University of Health Sciences, Pomona, CA, United States 
Area:
Molecular dynamics simulation
Website:
https://www.westernu.edu/stp/bios.php?bio=luoy

20 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Jiang W, Wijerathne TD, Zhang H, Lin YC, Jo S, Im W, Lacroix JJ, Luo YL. Structural and thermodynamic framework for PIEZO1 modulation by small molecules. Proceedings of the National Academy of Sciences of the United States of America. 120: e2310933120. PMID 38060566 DOI: 10.1073/pnas.2310933120  0.436
2020 Im W, Banavali N, Luo YL. Celebrating Benoît Roux's 60th birthday: quantifying biology at the membrane. Journal of Computational Chemistry. 41: 385-386. PMID 31943239 DOI: 10.1002/Jcc.26140  0.342
2019 Botello-Smith WM, Jiang W, Zhang H, Ozkan AD, Lin YC, Pham CN, Lacroix JJ, Luo Y. A mechanism for the activation of the mechanosensitive Piezo1 channel by the small molecule Yoda1. Nature Communications. 10: 4503. PMID 31582801 DOI: 10.1038/S41467-019-12501-1  0.336
2016 Luo Y, Rossi AR, Harris AL. Computational Studies of Molecular Permeation through Connexin26 Channels. Biophysical Journal. 110: 584-99. PMID 26840724 DOI: 10.1016/J.Bpj.2015.11.3528  0.327
2016 Chatterjee P, Alsamarah A, Kent D, Qian L, Wych D, Pham CN, Avetisyan A, Standley S, Baudry M, Luo Y. A Molecular Dynamics Study of Michaelis Complex for Designing Selective Transition State Analog Inhibitors for Cysteine Protease calpain-2 Biophysical Journal. 110: 545a. DOI: 10.1016/J.Bpj.2015.11.2916  0.316
2015 Alsamarah A, LaCuran AE, Oelschlaeger P, Hao J, Luo Y. Uncovering Molecular Bases Underlying Bone Morphogenetic Protein Receptor Inhibitor Selectivity. Plos One. 10: e0132221. PMID 26133550 DOI: 10.1371/Journal.Pone.0132221  0.307
2014 Jiang W, Phillips JC, Huang L, Fajer M, Meng Y, Gumbart JC, Luo Y, Schulten K, Roux B. Generalized Scalable Multiple Copy Algorithms for Molecular Dynamics Simulations in NAMD. Computer Physics Communications. 185: 908-916. PMID 24944348 DOI: 10.1016/J.Cpc.2013.12.014  0.613
2014 Lopes PE, Huang J, Shim J, Luo Y, Li H, Savelyev A, Patel D, He X, Roux B, MacKerell AD. Development of a Polarizable Force Field for Macromolecules Based on the Classical Drude Oscillator Biophysical Journal. 106: 43a. DOI: 10.1016/J.Bpj.2013.11.318  0.475
2014 Jiang W, Phillips J, Huang L, Fajer M, Meng Y, Gumbart JC, luo y, Schulten K, roux b. Generalized Scalable Multiple Copy Algorithms for Biological Molecular Dynamics Simulations in NAMD Biophysical Journal. 106: 412a. DOI: 10.1016/J.Bpj.2013.11.2316  0.614
2013 Lopes PE, Huang J, Shim J, Luo Y, Li H, Roux B, Mackerell AD. Force Field for Peptides and Proteins based on the Classical Drude Oscillator. Journal of Chemical Theory and Computation. 9: 5430-5449. PMID 24459460 DOI: 10.1021/Ct400781B  0.474
2013 Venable RM, Luo Y, Gawrisch K, Roux B, Pastor RW. Simulations of anionic lipid membranes: Development of interaction-specific ion parameters and validation using NMR data Journal of Physical Chemistry B. 117: 10183-10192. PMID 23924441 DOI: 10.1021/Jp401512Z  0.462
2013 Luo Y, Jiang W, Yu H, MacKerell AD, Roux B. Simulation study of ion pairing in concentrated aqueous salt solutions with a polarizable force field. Faraday Discussions. 160: 135-49; discussion 2. PMID 23795497 DOI: 10.1039/C2Fd20068F  0.565
2012 Jiang W, Luo Y, Maragliano L, Roux B. Calculation of Free Energy Landscape in Multi-Dimensions with Hamiltonian-Exchange Umbrella Sampling on Petascale Supercomputer. Journal of Chemical Theory and Computation. 8: 4672-4680. PMID 26605623 DOI: 10.1021/Ct300468G  0.484
2012 Herrou J, Rotskoff G, Luo Y, Roux B, Crosson S. Structural basis of a protein partner switch that regulates the general stress response of α-proteobacteria. Proceedings of the National Academy of Sciences of the United States of America. 109: E1415-23. PMID 22550172 DOI: 10.1073/Pnas.1116887109  0.441
2011 Luo Y, Harder E, Faibish RS, Roux B. Computer simulations of water flux and salt permeability of the reverse osmosis FT-30 aromatic polyamide membrane Journal of Membrane Science. 384: 1-9. DOI: 10.1016/J.Memsci.2011.08.057  0.462
2010 Egwolf B, Luo Y, Walters DE, Roux B. Ion selectivity of alpha-hemolysin with beta-cyclodextrin adapter. II. Multi-ion effects studied with grand canonical Monte Carlo/Brownian dynamics simulations. The Journal of Physical Chemistry. B. 114: 2901-9. PMID 20146515 DOI: 10.1021/Jp906791B  0.461
2010 Luo Y, Egwolf B, Walters DE, Roux B. Ion selectivity of alpha-hemolysin with a beta-cyclodextrin adapter. I. Single ion potential of mean force and diffusion coefficient. The Journal of Physical Chemistry. B. 114: 952-8. PMID 20041673 DOI: 10.1021/Jp906790F  0.47
2010 Luo Y, Roux B. Simulation of osmotic pressure in concentrated aqueous salt solutions Journal of Physical Chemistry Letters. 1: 183-189. DOI: 10.1021/Jz900079W  0.459
2009 Egwolf B, Luo Y, Walters DE, Roux B. Computational Study on the Ion Selectivity of Modified Alpha-Hemolysin Channels Biophysical Journal. 96: 662a. DOI: 10.1016/J.Bpj.2008.12.3499  0.48
2007 Gourmala C, Luo Y, Barbault F, Zhang Y, Ghalem S, Maurel F, Fan B. Elucidation of the LewisX-LewisX carbohydrate interaction with molecular dynamics simulations : A glycosynapse model Journal of Molecular Structure-Theochem. 821: 22-29. DOI: 10.1016/J.Theochem.2007.06.027  0.32
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