Christopher E. Ellison - Publications

Affiliations: 
Plant and Microbial Biology University of California, Berkeley, Berkeley, CA, United States 

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Torosin NS, Golla TR, Lawlor MA, Cao W, Ellison CE. Mode and tempo of 3D genome evolution in Drosophila. Molecular Biology and Evolution. PMID 36201625 DOI: 10.1093/molbev/msac216  0.304
2019 Ellison CE, Cao W. Nanopore sequencing and Hi-C scaffolding provide insight into the evolutionary dynamics of transposable elements and piRNA production in wild strains of Drosophila melanogaster. Nucleic Acids Research. PMID 31754714 DOI: 10.1093/Nar/Gkz1080  0.43
2019 Ellison C, Bachtrog D. Recurrent gene co-amplification on Drosophila X and Y chromosomes. Plos Genetics. 15: e1008251. PMID 31329593 DOI: 10.1371/Journal.Pgen.1008251  0.348
2019 Shah K, Cao W, Ellison CE. Adenine Methylation in Is Associated with the Tissue-Specific Expression of Developmental and Regulatory Genes. G3 (Bethesda, Md.). PMID 30988038 DOI: 10.1534/G3.119.400023  0.33
2019 Ellison C, Bachtrog D. Contingency in the convergent evolution of a regulatory network: Dosage compensation in Drosophila. Plos Biology. 17: e3000094. PMID 30742611 DOI: 10.1371/Journal.Pbio.3000094  0.458
2016 Branco S, Bi K, Liao HL, Gladieux P, Badouin H, Ellison CE, Nguyen NH, Vilgalys R, Peay KG, Taylor JW, Bruns TD. Continental-level population differentiation and environmental adaptation in the mushroom Suillus brevipes. Molecular Ecology. PMID 27761941 DOI: 10.1111/Mec.13892  0.734
2015 Smukowski Heil CS, Ellison C, Dubin M, Noor MA. Recombining without Hotspots: A Comprehensive Evolutionary Portrait of Recombination in Two Closely Related Species of Drosophila. Genome Biology and Evolution. 7: 2829-42. PMID 26430062 DOI: 10.1093/Gbe/Evv182  0.468
2015 Taylor JW, Hann-Soden C, Branco S, Sylvain I, Ellison CE. Clonal reproduction in fungi. Proceedings of the National Academy of Sciences of the United States of America. 112: 8901-8. PMID 26195774 DOI: 10.1073/Pnas.1503159112  0.533
2015 Branco S, Gladieux P, Ellison CE, Kuo A, LaButti K, Lipzen A, Grigoriev IV, Liao HL, Vilgalys R, Peay KG, Taylor JW, Bruns TD. Genetic isolation between two recently diverged populations of a symbiotic fungus. Molecular Ecology. 24: 2747-58. PMID 25728665 DOI: 10.1111/Mec.13132  0.744
2015 Ellison CE, Bachtrog D. Non-allelic gene conversion enables rapid evolutionary change at multiple regulatory sites encoded by transposable elements. Elife. 4. PMID 25688566 DOI: 10.7554/Elife.05899  0.353
2015 Ellison CE, Bachtrog D. Author response: Non-allelic gene conversion enables rapid evolutionary change at multiple regulatory sites encoded by transposable elements Elife. DOI: 10.7554/Elife.05899.013  0.33
2015 Taylor JW, Hann-Soden C, Branco S, Sylvain I, Ellison CE. Clonal reproduction in fungi Proceedings of the National Academy of Sciences of the United States of America. 112: 8901-8908. DOI: 10.1073/pnas.1503159112  0.68
2014 Wong VL, Ellison CE, Eisen MB, Pachter L, Brem RB. Structural variation among wild and industrial strains of Penicillium chrysogenum. Plos One. 9: e96784. PMID 24824901 DOI: 10.1371/Journal.Pone.0096784  0.342
2014 Ellison CE, Kowbel D, Glass NL, Taylor JW, Brem RB. Discovering functions of unannotated genes from a transcriptome survey of wild fungal isolates. Mbio. 5: e01046-13. PMID 24692637 DOI: 10.1128/Mbio.01046-13  0.543
2013 Zhou Q, Ellison CE, Kaiser VB, Alekseyenko AA, Gorchakov AA, Bachtrog D. The epigenome of evolving Drosophila neo-sex chromosomes: dosage compensation and heterochromatin formation. Plos Biology. 11: e1001711. PMID 24265597 DOI: 10.1371/Journal.Pbio.1001711  0.366
2013 Alekseyenko AA, Ellison CE, Gorchakov AA, Zhou Q, Kaiser VB, Toda N, Walton Z, Peng S, Park PJ, Bachtrog D, Kuroda MI. Conservation and de novo acquisition of dosage compensation on newly evolved sex chromosomes in Drosophila. Genes & Development. 27: 853-8. PMID 23630075 DOI: 10.1101/Gad.215426.113  0.369
2011 Roper M, Ellison C, Taylor JW, Glass NL. Nuclear and genome dynamics in multinucleate ascomycete fungi. Current Biology : Cb. 21: R786-93. PMID 21959169 DOI: 10.1016/J.Cub.2011.06.042  0.632
2011 Ellison CE, Stajich JE, Jacobson DJ, Natvig DO, Lapidus A, Foster B, Aerts A, Riley R, Lindquist EA, Grigoriev IV, Taylor JW. Massive changes in genome architecture accompany the transition to self-fertility in the filamentous fungus Neurospora tetrasperma. Genetics. 189: 55-69. PMID 21750257 DOI: 10.1534/Genetics.111.130690  0.741
2011 Ellison CE, Hall C, Kowbel D, Welch J, Brem RB, Glass NL, Taylor JW. Population genomics and local adaptation in wild isolates of a model microbial eukaryote. Proceedings of the National Academy of Sciences of the United States of America. 108: 2831-6. PMID 21282627 DOI: 10.1073/Pnas.1014971108  0.631
2011 Fishbein M, Chuba D, Ellison C, Mason-Gamer RJ, Lynch SP. Phylogenetic relationships of Asclepias (Apocynaceae) inferred from non-coding chloroplast DNA sequences Systematic Botany. 36: 1008-1023. DOI: 10.1600/036364411X605010  0.371
2010 Taylor JW, Ellison CE. Mushrooms: morphological complexity in the fungi. Proceedings of the National Academy of Sciences of the United States of America. 107: 11655-6. PMID 20571118 DOI: 10.1073/Pnas.1006430107  0.528
2008 Binford GJ, Callahan MS, Bodner MR, Rynerson MR, Núñez PB, Ellison CE, Duncan RP. Phylogenetic relationships of Loxosceles and Sicarius spiders are consistent with Western Gondwanan vicariance. Molecular Phylogenetics and Evolution. 49: 538-53. PMID 18755282 DOI: 10.1016/J.Ympev.2008.08.003  0.341
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