| Year |
Citation |
Score |
| 2023 |
Colman DR, Veach A, Stefánsson A, Wurch L, Belisle BS, Podar PT, Yang Z, Klingeman D, Senba K, Murakami KS, Kristjánsson JK, Björnsdóttir SH, Boyd ES, Podar M. Tectonic and geological setting influence hot spring microbiology. Environmental Microbiology. PMID 37553090 DOI: 10.1111/1462-2920.16472 |
0.304 |
|
| 2022 |
Meslier V, Quinquis B, Da Silva K, Plaza Oñate F, Pons N, Roume H, Podar M, Almeida M. Benchmarking second and third-generation sequencing platforms for microbial metagenomics. Scientific Data. 9: 694. PMID 36369227 DOI: 10.1038/s41597-022-01762-z |
0.357 |
|
| 2022 |
Hahn CR, Farag IF, Murphy CL, Podar M, Elshahed MS, Youssef NH. Microbial Diversity and Sulfur Cycling in an Early Earth Analogue: From Ancient Novelty to Modern Commonality. Mbio. e0001622. PMID 35258328 DOI: 10.1128/mbio.00016-22 |
0.313 |
|
| 2021 |
Carper DL, Weston DJ, Barde A, Timm CM, Lu TY, Burdick LH, Jawdy SS, Klingeman DM, Robeson MS, Veach AM, Cregger MA, Kalluri UC, Schadt CW, Podar M, Doktycz MJ, et al. Cultivating the Bacterial Microbiota of Roots. Msystems. e0130620. PMID 34156297 DOI: 10.1128/mSystems.01306-20 |
0.681 |
|
| 2021 |
Kim M, Wilpiszeski RL, Wells M, Wymore AM, Gionfriddo CM, Brooks SC, Podar M, Elias DA. Metagenome-Assembled Genome Sequences of Novel Prokaryotic Species from the Mercury-Contaminated East Fork Poplar Creek, Oak Ridge, Tennessee, USA. Microbiology Resource Announcements. 10. PMID 33927032 DOI: 10.1128/MRA.00153-21 |
0.301 |
|
| 2020 |
Reysenbach AL, St John E, Meneghin J, Flores GE, Podar M, Dombrowski N, Spang A, L'Haridon S, Humphris SE, de Ronde CEJ, Caratori Tontini F, Tivey M, Stucker VK, Stewart LC, Diehl A, et al. Complex subsurface hydrothermal fluid mixing at a submarine arc volcano supports distinct and highly diverse microbial communities. Proceedings of the National Academy of Sciences of the United States of America. PMID 33277434 DOI: 10.1073/pnas.2019021117 |
0.408 |
|
| 2020 |
Wilpiszeski RL, Gionfriddo CM, Wymore AM, Moon JW, Lowe KA, Podar M, Rafie S, Fields MW, Hazen TC, Ge X, Poole F, Adams MWW, Chakraborty R, Fan Y, Van Nostrand JD, et al. In-field bioreactors demonstrate dynamic shifts in microbial communities in response to geochemical perturbations. Plos One. 15: e0232437. PMID 32986713 DOI: 10.1371/journal.pone.0232437 |
0.372 |
|
| 2020 |
Podar PT, Yang Z, Björnsdóttir SH, Podar M. Comparative Analysis of Microbial Diversity Across Temperature Gradients in Hot Springs From Yellowstone and Iceland. Frontiers in Microbiology. 11: 1625. PMID 32760379 DOI: 10.3389/Fmicb.2020.01625 |
0.454 |
|
| 2020 |
Moon JW, Paradis CJ, Joyner DC, von Netzer F, Majumder EL, Dixon ER, Podar M, Ge X, Walian PJ, Smith HJ, Wu X, Zane GM, Walker KF, Thorgersen MP, Poole Ii FL, et al. Characterization of subsurface media from locations up- and down-gradient of a uranium-contaminated aquifer. Chemosphere. 255: 126951. PMID 32417512 DOI: 10.1016/J.Chemosphere.2020.126951 |
0.333 |
|
| 2020 |
Pelletier DA, Burdick LH, Podar M, Schadt CW, Kalluri UC. Draft Genome Sequence of sp. Strain BK230, Isolated from Roots. Microbiology Resource Announcements. 9. PMID 32193238 DOI: 10.1128/MRA.00159-20 |
0.588 |
|
| 2020 |
Balachandran M, Cross KL, Podar M. Single-Cell Genomics and the Oral Microbiome. Journal of Dental Research. 99: 613-620. PMID 32091935 DOI: 10.1177/0022034520907380 |
0.458 |
|
| 2020 |
Bubier JA, Philip VM, Quince C, Campbell J, Zhou Y, Vishnivetskaya T, Duvvuru S, Hageman Blair R, Ndukum J, Donohue KD, Foster CM, Mellert DJ, Weinstock G, Culiat CT, O'Hara B, ... ... Podar M, et al. A Microbe Associated with Sleep Revealed by a Novel Systems-Genetic Analysis of the Microbiome in Collaborative Cross Mice. Genetics. PMID 31896565 DOI: 10.1534/Genetics.119.303013 |
0.305 |
|
| 2019 |
Kirmiz N, Galindo K, Cross KL, Luna E, Rhoades N, Podar M, Flores GE. Comparative genomics guides elucidation of vitamin B12 biosynthesis in novel human associated . Applied and Environmental Microbiology. PMID 31757822 DOI: 10.1128/Aem.02117-19 |
0.365 |
|
| 2019 |
Cross KL, Campbell JH, Balachandran M, Campbell AG, Cooper SJ, Griffen A, Heaton M, Joshi S, Klingeman D, Leys E, Yang Z, Parks JM, Podar M. Targeted isolation and cultivation of uncultivated bacteria by reverse genomics. Nature Biotechnology. PMID 31570900 DOI: 10.1038/S41587-019-0260-6 |
0.477 |
|
| 2019 |
Christensen GA, Gionfriddo CM, King AJ, Moberly JG, Miller CL, Somenahally AC, Callister SJ, Brewer H, Podar M, Brown SD, Palumbo AV, Brandt CC, Wymore AM, Brooks SC, Hwang C, et al. Determining the Reliability of Measuring Mercury Cycling Gene Abundance with Correlations with Mercury and Methylmercury Concentrations. Environmental Science & Technology. PMID 31260289 DOI: 10.1021/Acs.Est.8B06389 |
0.387 |
|
| 2018 |
Jarett JK, Nayfach S, Podar M, Inskeep W, Ivanova NN, Munson-McGee J, Schulz F, Young M, Jay ZJ, Beam JP, Kyrpides NC, Malmstrom RR, Stepanauskas R, Woyke T. Single-cell genomics of co-sorted Nanoarchaeota suggests novel putative host associations and diversification of proteins involved in symbiosis. Microbiome. 6: 161. PMID 30223889 DOI: 10.1186/S40168-018-0539-8 |
0.424 |
|
| 2018 |
St John E, Liu Y, Podar M, Stott MB, Meneghin J, Chen Z, Lagutin K, Mitchell K, Reysenbach AL. A new symbiotic nanoarchaeote (Candidatus Nanoclepta minutus) and its host (Zestosphaera tikiterensis gen. nov., sp. nov.) from a New Zealand hot spring. Systematic and Applied Microbiology. PMID 30195930 DOI: 10.1016/J.Syapm.2018.08.005 |
0.408 |
|
| 2018 |
Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, ... ... Podar M, et al. Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology. 36: 660. PMID 29979671 DOI: 10.1038/Nbt0718-660A |
0.301 |
|
| 2018 |
Beall CJ, Campbell AG, Griffen AL, Podar M, Leys EJ. Genomics of the Uncultivated, Periodontitis-Associated Bacterium sp. BU045 (Oral Taxon 808). Msystems. 3. PMID 29896567 DOI: 10.1128/mSystems.00018-18 |
0.329 |
|
| 2018 |
Gilmour CC, Bullock AL, McBurney A, Podar M, Elias DA. Robust Mercury Methylation across Diverse Methanogenic Archaea. Mbio. 9. PMID 29636434 DOI: 10.1128/Mbio.02403-17 |
0.305 |
|
| 2018 |
Reysenbach AL, Donaho JA, Kelley JF, St John E, Turner C, Podar M, Stott MB. Draft Genome Sequence of a Dictyoglomus sp. from an Enrichment Culture of a New Zealand Geothermal Spring. Genome Announcements. 6. PMID 29545298 DOI: 10.1128/Genomea.00150-18 |
0.401 |
|
| 2018 |
Cross KL, Chirania P, Xiong W, Beall CJ, Elkins JG, Giannone RJ, Griffen AL, Guss AM, Hettich RL, Joshi SS, Mokrzan EM, Martin RK, Zhulin IB, Leys EJ, Podar M. Insights into the Evolution of Host Association through the Isolation and Characterization of a Novel Human Periodontal Pathobiont,. Mbio. 9. PMID 29535201 DOI: 10.1128/Mbio.02061-17 |
0.385 |
|
| 2018 |
Vishnivetskaya TA, Hu H, Van Nostrand JD, Wymore AM, Xu X, Qiu G, Feng X, Zhou J, Brown SD, Brandt CC, Podar M, Gu B, Elias DA. Microbial community structure with trends in methylation gene diversity and abundance in mercury-contaminated rice paddy soils in Guizhou, China. Environmental Science. Processes & Impacts. PMID 29504614 DOI: 10.1039/C7Em00558J |
0.411 |
|
| 2018 |
Lee LL, Blumer-Schuette SE, Izquierdo JA, Zurawski JV, Loder AJ, Conway JM, Elkins JG, Podar M, Clum A, Jones PC, Piatek MJ, Weighill DA, Jacobson DA, Adams MWW, Kelly RM. Genus-wide assessment of lignocellulose utilization in the extremely thermophilicby genomic, pan-genomic and metagenomic analysis. Applied and Environmental Microbiology. PMID 29475869 DOI: 10.1128/Aem.02694-17 |
0.438 |
|
| 2018 |
Reysenbach AL, Donaho JA, Hinsch TM, Kelley JF, Kouba K, Podar M, Stott MB. Draft Genome Sequence of a Novelsp. Strain from a New Zealand Hot Spring Enrichment Culture. Genome Announcements. 6. PMID 29472320 DOI: 10.1128/Genomea.00005-18 |
0.368 |
|
| 2018 |
Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, ... ... Podar M, et al. Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology. 36: 196. PMID 29406516 DOI: 10.1038/Nbt0218-196A |
0.354 |
|
| 2017 |
Christensen GA, Somenahally AC, Moberly JG, Miller CM, King AJ, Gilmour CC, Brown SD, Podar M, Brandt CC, Brooks SC, Palumbo AV, Wall JD, Elias DA. Carbon Amendments Alter Microbial Community Structure and Net Mercury Methylation Potential in Sediments. Applied and Environmental Microbiology. PMID 29150503 DOI: 10.1128/Aem.01049-17 |
0.432 |
|
| 2017 |
Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, ... ... Podar M, et al. Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology. 35: 725-731. PMID 28787424 DOI: 10.1038/Nbt.3893 |
0.411 |
|
| 2017 |
Andrei AŞ, Baricz A, Robeson MS, Păuşan MR, Tămaş T, Chiriac C, Szekeres E, Barbu-Tudoran L, Levei EA, Coman C, Podar M, Banciu HL. Hypersaline sapropels act as hotspots for microbial dark matter. Scientific Reports. 7: 6150. PMID 28733590 DOI: 10.1038/S41598-017-06232-W |
0.393 |
|
| 2017 |
King AJ, Preheim SP, Bailey KL, Robeson MS, Roy Chowdhury T, Crable BR, Hurt RA, Mehlhorn TL, Lowe KA, Phelps TJ, Palumbo AV, Brandt CC, Brown SD, Podar M, Zhang P, et al. Temporal Dynamics of In-Field Bioreactor Populations Reflect the Groundwater System and Respond Predictably to Perturbation. Environmental Science & Technology. PMID 28112946 DOI: 10.1021/Acs.Est.6B04751 |
0.45 |
|
| 2016 |
Bird JT, Baker BJ, Probst AJ, Podar M, Lloyd KG. Culture Independent Genomic Comparisons Reveal Environmental Adaptations for Altiarchaeales. Frontiers in Microbiology. 7: 1221. PMID 27547202 DOI: 10.3389/Fmicb.2016.01221 |
0.45 |
|
| 2016 |
Christensen GA, Wymore AM, King AJ, Podar M, Hurt RA, Santillan EU, Soren A, Brandt CC, Brown SD, Palumbo AV, Wall JD, Gilmour CC, Elias DA. Development and Validation of Broad-Range Qualitative and Clade-Specific Quantitative Molecular Probes for Assessing Mercury Methylation in the Environment. Applied and Environmental Microbiology. PMID 27422835 DOI: 10.1128/Aem.01271-16 |
0.389 |
|
| 2016 |
Utturkar SM, Cude WN, Robeson MS, Yang ZK, Klingeman DM, Land ML, Allman SL, Lu TS, Brown SD, Schadt CW, Podar M, Doktycz MJ, Pelletier DA. Enrichment of root endophytic bacteria from Populus deltoides and single-cell genomics analysis. Applied and Environmental Microbiology. PMID 27422831 DOI: 10.1128/Aem.01285-16 |
0.643 |
|
| 2016 |
Wurch L, Giannone RJ, Belisle BS, Swift C, Utturkar S, Hettich RL, Reysenbach AL, Podar M. Genomics-informed isolation and characterization of a symbiotic Nanoarchaeota system from a terrestrial geothermal environment. Nature Communications. 7: 12115. PMID 27378076 DOI: 10.1038/Ncomms12115 |
0.416 |
|
| 2016 |
Li W, Podar M, Morgan-Kiss RM. Ultrastructural and single-cell level characterization reveals metabolic versatility in a microbial eukaryote community from an ice-covered Antarctic lake. Applied and Environmental Microbiology. PMID 27084010 DOI: 10.1128/Aem.00478-16 |
0.383 |
|
| 2016 |
Utturkar SM, Huber H, Leptihn S, Loh B, Brown SD, Stetter KO, Podar M. Draft Genome Sequence of Pyrodictium occultum PL19T, a Marine Hyperthermophilic Species of Archaea That Grows Optimally at 105°C. Genome Announcements. 4. PMID 26950321 DOI: 10.1128/Genomea.00016-16 |
0.394 |
|
| 2016 |
D'Amore R, Ijaz UZ, Schirmer M, Kenny JG, Gregory R, Darby AC, Shakya M, Podar M, Quince C, Hall N. A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling. Bmc Genomics. 17: 55. PMID 26763898 DOI: 10.1186/S12864-015-2194-9 |
0.731 |
|
| 2015 |
Podar M, Gilmour CC, Brandt CC, Soren A, Brown SD, Crable BR, Palumbo AV, Somenahally AC, Elias DA. Global prevalence and distribution of genes and microorganisms involved in mercury methylation. Science Advances. 1: e1500675. PMID 26601305 DOI: 10.1126/Sciadv.1500675 |
0.352 |
|
| 2015 |
Hamerly T, Tripet BP, Tigges M, Giannone RJ, Wurch L, Hettich RL, Podar M, Copié V, Bothner B. Untargeted metabolomics studies employing NMR and LC-MS reveal metabolic coupling between Nanoarcheum equitans and its archaeal host Ignicoccus hospitalis. Metabolomics : Official Journal of the Metabolomic Society. 11: 895-907. PMID 26273237 DOI: 10.1007/S11306-014-0747-6 |
0.362 |
|
| 2015 |
Andrei AŞ, Robeson MS, Baricz A, Coman C, Muntean V, Ionescu A, Etiope G, Alexe M, Sicora CI, Podar M, Banciu HL. Contrasting taxonomic stratification of microbial communities in two hypersaline meromictic lakes. The Isme Journal. PMID 25932617 DOI: 10.1038/Ismej.2015.60 |
0.457 |
|
| 2015 |
Coman C, Chiriac CM, Robeson MS, Ionescu C, Dragos N, Barbu-Tudoran L, Andrei A?, Banciu HL, Sicora C, Podar M. Structure, mineralogy, and microbial diversity of geothermal spring microbialites associated with a deep oil drilling in Romania. Frontiers in Microbiology. 6: 253. PMID 25870594 DOI: 10.3389/Fmicb.2015.00253 |
0.418 |
|
| 2015 |
Vishnivetskaya TA, Hamilton-Brehm SD, Podar M, Mosher JJ, Palumbo AV, Phelps TJ, Keller M, Elkins JG. Community analysis of plant biomass-degrading microorganisms from Obsidian Pool, Yellowstone National Park. Microbial Ecology. 69: 333-45. PMID 25319238 DOI: 10.1007/S00248-014-0500-8 |
0.431 |
|
| 2015 |
Giannone RJ, Wurch LL, Heimerl T, Martin S, Yang Z, Huber H, Rachel R, Hettich RL, Podar M. Life on the edge: functional genomic response of Ignicoccus hospitalis to the presence of Nanoarchaeum equitans. The Isme Journal. 9: 101-14. PMID 25012904 DOI: 10.1038/Ismej.2014.112 |
0.367 |
|
| 2014 |
Campbell AG, Schwientek P, Vishnivetskaya T, Woyke T, Levy S, Beall CJ, Griffen A, Leys E, Podar M. Diversity and genomic insights into the uncultured Chloroflexi from the human microbiota. Environmental Microbiology. 16: 2635-43. PMID 24738594 DOI: 10.1111/1462-2920.12461 |
0.461 |
|
| 2014 |
Beall CJ, Campbell AG, Dayeh DM, Griffen AL, Podar M, Leys EJ. Single cell genomics of uncultured, health-associated Tannerella BU063 (Oral Taxon 286) and comparison to the closely related pathogen Tannerella forsythia. Plos One. 9: e89398. PMID 24551246 DOI: 10.1371/Journal.Pone.0089398 |
0.459 |
|
| 2013 |
Somenahally AC, Mosher JJ, Yuan T, Podar M, Phelps TJ, Brown SD, Yang ZK, Hazen TC, Arkin AP, Palumbo AV, Van Nostrand JD, Zhou J, Elias DA. Hexavalent chromium reduction under fermentative conditions with lactate stimulated native microbial communities. Plos One. 8: e83909. PMID 24376771 DOI: 10.1371/Journal.Pone.0083909 |
0.34 |
|
| 2013 |
Shakya M, Gottel N, Castro H, Yang ZK, Gunter L, Labbé J, Muchero W, Bonito G, Vilgalys R, Tuskan G, Podar M, Schadt CW. A multifactor analysis of fungal and bacterial community structure in the root microbiome of mature Populus deltoides trees. Plos One. 8: e76382. PMID 24146861 DOI: 10.1371/Journal.Pone.0076382 |
0.76 |
|
| 2013 |
Gilmour CC, Podar M, Bullock AL, Graham AM, Brown SD, Somenahally AC, Johs A, Hurt RA, Bailey KL, Elias DA. Mercury methylation by novel microorganisms from new environments. Environmental Science & Technology. 47: 11810-20. PMID 24024607 DOI: 10.1021/Es403075T |
0.369 |
|
| 2013 |
Podar M, Makarova KS, Graham DE, Wolf YI, Koonin EV, Reysenbach AL. Insights into archaeal evolution and symbiosis from the genomes of a nanoarchaeon and its inferred crenarchaeal host from Obsidian Pool, Yellowstone National Park. Biology Direct. 8: 9. PMID 23607440 DOI: 10.1186/1745-6150-8-9 |
0.409 |
|
| 2013 |
Campbell AG, Campbell JH, Schwientek P, Woyke T, Sczyrba A, Allman S, Beall CJ, Griffen A, Leys E, Podar M. Multiple single-cell genomes provide insight into functions of uncultured Deltaproteobacteria in the human oral cavity. Plos One. 8: e59361. PMID 23555659 DOI: 10.1371/Journal.Pone.0059361 |
0.451 |
|
| 2013 |
Campbell JH, O'Donoghue P, Campbell AG, Schwientek P, Sczyrba A, Woyke T, Söll D, Podar M. UGA is an additional glycine codon in uncultured SR1 bacteria from the human microbiota. Proceedings of the National Academy of Sciences of the United States of America. 110: 5540-5. PMID 23509275 DOI: 10.1073/Pnas.1303090110 |
0.423 |
|
| 2013 |
Parks JM, Johs A, Podar M, Bridou R, Hurt RA, Smith SD, Tomanicek SJ, Qian Y, Brown SD, Brandt CC, Palumbo AV, Smith JC, Wall JD, Elias DA, Liang L. The genetic basis for bacterial mercury methylation. Science (New York, N.Y.). 339: 1332-5. PMID 23393089 DOI: 10.1126/Science.1230667 |
0.352 |
|
| 2013 |
Shakya M, Quince C, Campbell JH, Yang ZK, Schadt CW, Podar M. Comparative metagenomic and rRNA microbial diversity characterization using archaeal and bacterial synthetic communities. Environmental Microbiology. 15: 1882-99. PMID 23387867 DOI: 10.1111/1462-2920.12086 |
0.77 |
|
| 2012 |
Brown SD, Podar M, Klingeman DM, Johnson CM, Yang ZK, Utturkar SM, Land ML, Mosher JJ, Hurt RA, Phelps TJ, Palumbo AV, Arkin AP, Hazen TC, Elias DA. Draft genome sequences for two metal-reducing Pelosinus fermentans strains isolated from a Cr(VI)-contaminated site and for type strain R7. Journal of Bacteriology. 194: 5147-8. PMID 22933770 DOI: 10.1128/Jb.01174-12 |
0.364 |
|
| 2012 |
Hurt RA, Brown SD, Podar M, Palumbo AV, Elias DA. Sequencing intractable DNA to close microbial genomes. Plos One. 7: e41295. PMID 22859974 DOI: 10.1371/Journal.Pone.0041295 |
0.411 |
|
| 2012 |
Campbell JH, Foster CM, Vishnivetskaya T, Campbell AG, Yang ZK, Wymore A, Palumbo AV, Chesler EJ, Podar M. Host genetic and environmental effects on mouse intestinal microbiota. The Isme Journal. 6: 2033-44. PMID 22695862 DOI: 10.1038/Ismej.2012.54 |
0.41 |
|
| 2012 |
Flores GE, Shakya M, Meneghin J, Yang ZK, Seewald JS, Geoff Wheat C, Podar M, Reysenbach AL. Inter-field variability in the microbial communities of hydrothermal vent deposits from a back-arc basin. Geobiology. 10: 333-46. PMID 22443386 DOI: 10.1111/J.1472-4669.2012.00325.X |
0.715 |
|
| 2012 |
Mosher JJ, Phelps TJ, Podar M, Hurt RA, Campbell JH, Drake MM, Moberly JG, Schadt CW, Brown SD, Hazen TC, Arkin AP, Palumbo AV, Faybishenko BA, Elias DA. Microbial community succession during lactate amendment and electron acceptor limitation reveals a predominance of metal-reducing Pelosinus spp. Applied and Environmental Microbiology. 78: 2082-91. PMID 22267668 DOI: 10.1128/Aem.07165-11 |
0.647 |
|
| 2012 |
Griffen AL, Beall CJ, Campbell JH, Firestone ND, Kumar PS, Yang ZK, Podar M, Leys EJ. Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing. The Isme Journal. 6: 1176-85. PMID 22170420 DOI: 10.1038/Ismej.2011.191 |
0.467 |
|
| 2012 |
Mosher JJ, Vishnivetskaya TA, Elias DA, Podar M, Brooks SC, Brown SD, Brandt CC, Palumbo AV. Characterization of the Deltaproteobacteria in contaminated and uncontaminated stream sediments and identification of potential mercury methylators Aquatic Microbial Ecology. 66: 271-282. DOI: 10.3354/Ame01563 |
0.405 |
|
| 2011 |
Giannone RJ, Huber H, Karpinets T, Heimerl T, Küper U, Rachel R, Keller M, Hettich RL, Podar M. Proteomic characterization of cellular and molecular processes that enable the Nanoarchaeum equitans--Ignicoccus hospitalis relationship. Plos One. 6: e22942. PMID 21826220 DOI: 10.1371/Journal.Pone.0022942 |
0.316 |
|
| 2011 |
Gottel NR, Castro HF, Kerley M, Yang Z, Pelletier DA, Podar M, Karpinets T, Uberbacher E, Tuskan GA, Vilgalys R, Doktycz MJ, Schadt CW. Distinct microbial communities within the endosphere and rhizosphere of Populus deltoides roots across contrasting soil types. Applied and Environmental Microbiology. 77: 5934-44. PMID 21764952 DOI: 10.1128/Aem.05255-11 |
0.673 |
|
| 2011 |
Sukharnikov LO, Cantwell BJ, Podar M, Zhulin IB. Cellulases: ambiguous nonhomologous enzymes in a genomic perspective. Trends in Biotechnology. 29: 473-9. PMID 21683463 DOI: 10.1016/J.Tibtech.2011.04.008 |
0.408 |
|
| 2011 |
Brown SD, Wall JD, Kucken AM, Gilmour CC, Podar M, Brandt CC, Teshima H, Detter JC, Han CS, Land ML, Lucas S, Han J, Pennacchio L, Nolan M, Pitluck S, et al. Genome sequence of the mercury-methylating and pleomorphic Desulfovibrio africanus Strain Walvis Bay. Journal of Bacteriology. 193: 4037-8. PMID 21642452 DOI: 10.1128/Jb.05223-11 |
0.4 |
|
| 2011 |
Flores GE, Campbell JH, Kirshtein JD, Meneghin J, Podar M, Steinberg JI, Seewald JS, Tivey MK, Voytek MA, Yang ZK, Reysenbach AL. Microbial community structure of hydrothermal deposits from geochemically different vent fields along the Mid-Atlantic Ridge. Environmental Microbiology. 13: 2158-71. PMID 21418499 DOI: 10.1111/J.1462-2920.2011.02463.X |
0.413 |
|
| 2011 |
Brown SD, Gilmour CC, Kucken AM, Wall JD, Elias DA, Brandt CC, Podar M, Chertkov O, Held B, Bruce DC, Detter JC, Tapia R, Han CS, Goodwin LA, Cheng JF, et al. Genome sequence of the mercury-methylating strain Desulfovibrio desulfuricans ND132. Journal of Bacteriology. 193: 2078-9. PMID 21357488 DOI: 10.1128/Jb.00170-11 |
0.388 |
|
| 2011 |
Vishnivetskaya TA, Mosher JJ, Palumbo AV, Yang ZK, Podar M, Brown SD, Brooks SC, Gu B, Southworth GR, Drake MM, Brandt CC, Elias DA. Mercury and other heavy metals influence bacterial community structure in contaminated Tennessee streams. Applied and Environmental Microbiology. 77: 302-11. PMID 21057024 DOI: 10.1128/Aem.01715-10 |
0.502 |
|
| 2010 |
Elkins JG, Lochner A, Hamilton-Brehm SD, Davenport KW, Podar M, Brown SD, Land ML, Hauser LJ, Klingeman DM, Raman B, Goodwin LA, Tapia R, Meincke LJ, Detter JC, Bruce DC, et al. Complete genome sequence of the cellulolytic thermophile Caldicellulosiruptor obsidiansis OB47T. Journal of Bacteriology. 192: 6099-100. PMID 20851897 DOI: 10.1128/Jb.00950-10 |
0.393 |
|
| 2010 |
Porat I, Vishnivetskaya TA, Mosher JJ, Brandt CC, Yang ZK, Brooks SC, Liang L, Drake MM, Podar M, Brown SD, Palumbo AV. Characterization of archaeal community in contaminated and uncontaminated surface stream sediments. Microbial Ecology. 60: 784-95. PMID 20725722 DOI: 10.1007/S00248-010-9734-2 |
0.422 |
|
| 2010 |
Miller LD, Mosher JJ, Venkateswaran A, Yang ZK, Palumbo AV, Phelps TJ, Podar M, Schadt CW, Keller M. Establishment and metabolic analysis of a model microbial community for understanding trophic and electron accepting interactions of subsurface anaerobic environments. Bmc Microbiology. 10: 149. PMID 20497531 DOI: 10.1186/1471-2180-10-149 |
0.618 |
|
| 2010 |
Hamilton-Brehm SD, Mosher JJ, Vishnivetskaya T, Podar M, Carroll S, Allman S, Phelps TJ, Keller M, Elkins JG. Caldicellulosiruptor obsidiansis sp. nov., an anaerobic, extremely thermophilic, cellulolytic bacterium isolated from Obsidian Pool, Yellowstone National Park. Applied and Environmental Microbiology. 76: 1014-20. PMID 20023107 DOI: 10.1128/Aem.01903-09 |
0.308 |
|
| 2010 |
Mosher JJ, Drake MM, Carroll SL, Yang ZK, Schadt CW, Brown SD, Podar M, Hazen TC, Arkin AP, Phelps TJ, Palumbo AV, Faybishenko BA, Elias DA. Microbial Community Dynamics of Lactate Enriched Hanford Groundwaters Lawrence Berkeley National Laboratory. DOI: 10.2172/986244 |
0.615 |
|
| 2009 |
Reysenbach AL, Hamamura N, Podar M, Griffiths E, Ferreira S, Hochstein R, Heidelberg J, Johnson J, Mead D, Pohorille A, Sarmiento M, Schweighofer K, Seshadri R, Voytek MA. Complete and draft genome sequences of six members of the Aquificales. Journal of Bacteriology. 191: 1992-3. PMID 19136599 DOI: 10.1128/Jb.01645-08 |
0.348 |
|
| 2008 |
Podar M, Anderson I, Makarova KS, Elkins JG, Ivanova N, Wall MA, Lykidis A, Mavromatis K, Sun H, Hudson ME, Chen W, Deciu C, Hutchison D, Eads JR, Anderson A, et al. A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans. Genome Biology. 9: R158. PMID 19000309 DOI: 10.1186/Gb-2008-9-11-R158 |
0.343 |
|
| 2008 |
Elkins JG, Podar M, Graham DE, Makarova KS, Wolf Y, Randau L, Hedlund BP, Brochier-Armanet C, Kunin V, Anderson I, Lapidus A, Goltsman E, Barry K, Koonin EV, Hugenholtz P, et al. A korarchaeal genome reveals insights into the evolution of the Archaea. Proceedings of the National Academy of Sciences of the United States of America. 105: 8102-7. PMID 18535141 DOI: 10.1073/Pnas.0801980105 |
0.432 |
|
| 2007 |
Warnecke F, Luginbühl P, Ivanova N, Ghassemian M, Richardson TH, Stege JT, Cayouette M, McHardy AC, Djordjevic G, Aboushadi N, Sorek R, Tringe SG, Podar M, Martin HG, Kunin V, et al. Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite. Nature. 450: 560-5. PMID 18033299 DOI: 10.1038/Nature06269 |
0.469 |
|
| 2007 |
Podar M. Two-component systems in microbial communities: approaches and resources for generating and analyzing metagenomic data sets. Methods in Enzymology. 422: 32-46. PMID 17628133 DOI: 10.1016/S0076-6879(06)22002-0 |
0.378 |
|
| 2007 |
Podar M, Abulencia CB, Walcher M, Hutchison D, Zengler K, Garcia JA, Holland T, Cotton D, Hauser L, Keller M. Targeted access to the genomes of low-abundance organisms in complex microbial communities. Applied and Environmental Microbiology. 73: 3205-14. PMID 17369337 DOI: 10.1128/Aem.02985-06 |
0.516 |
|
| 2006 |
Podar M, Reysenbach AL. New opportunities revealed by biotechnological explorations of extremophiles. Current Opinion in Biotechnology. 17: 250-5. PMID 16701993 DOI: 10.1016/J.Copbio.2006.05.002 |
0.384 |
|
| 2006 |
Abulencia CB, Wyborski DL, Garcia JA, Podar M, Chen W, Chang SH, Chang HW, Watson D, Brodie EL, Hazen TC, Keller M. Environmental whole-genome amplification to access microbial populations in contaminated sediments. Applied and Environmental Microbiology. 72: 3291-301. PMID 16672469 DOI: 10.1128/Aem.72.5.3291-3301.2006 |
0.441 |
|
| 2005 |
Giovannoni SJ, Tripp HJ, Givan S, Podar M, Vergin KL, Baptista D, Bibbs L, Eads J, Richardson TH, Noordewier M, Rappé MS, Short JM, Carrington JC, Mathur EJ. Genome streamlining in a cosmopolitan oceanic bacterium. Science (New York, N.Y.). 309: 1242-5. PMID 16109880 DOI: 10.1126/Science.1114057 |
0.401 |
|
| 2005 |
Podar M, Eads JR, Richardson TH. Evolution of a microbial nitrilase gene family: A comparative and environmental genomics study Bmc Evolutionary Biology. 5. PMID 16083508 DOI: 10.1186/1471-2148-5-42 |
0.421 |
|
| 2005 |
Tringe SG, von Mering C, Kobayashi A, Salamov AA, Chen K, Chang HW, Podar M, Short JM, Mathur EJ, Detter JC, Bork P, Hugenholtz P, Rubin EM. Comparative metagenomics of microbial communities. Science (New York, N.Y.). 308: 554-7. PMID 15845853 DOI: 10.1126/Science.1107851 |
0.534 |
|
| 2004 |
Robertson DE, Chaplin JA, DeSantis G, Podar M, Madden M, Chi E, Richardson T, Milan A, Miller M, Weiner DP, Wong K, McQuaid J, Farwell B, Preston LA, Tan X, et al. Exploring nitrilase sequence space for enantioselective catalysis. Applied and Environmental Microbiology. 70: 2429-36. PMID 15066841 DOI: 10.1128/Aem.70.4.2429-2436.2004 |
0.386 |
|
| 2003 |
Waters E, Hohn MJ, Ahel I, Graham DE, Adams MD, Barnstead M, Beeson KY, Bibbs L, Bolanos R, Keller M, Kretz K, Lin X, Mathur E, Ni J, Podar M, et al. The genome of Nanoarchaeum equitans: insights into early archaeal evolution and derived parasitism. Proceedings of the National Academy of Sciences of the United States of America. 100: 12984-8. PMID 14566062 DOI: 10.1073/Pnas.1735403100 |
0.415 |
|
| 2002 |
Podar M, Mullineaux L, Huang HR, Perlman PS, Sogin ML. Bacterial group II introns in a deep-sea hydrothermal vent environment. Applied and Environmental Microbiology. 68: 6392-8. PMID 12450865 DOI: 10.1128/Aem.68.12.6392-6398.2002 |
0.428 |
|
| 2001 |
Podar M, Haddock SH, Sogin ML, Harbison GR. A molecular phylogenetic framework for the phylum Ctenophora using 18S rRNA genes. Molecular Phylogenetics and Evolution. 21: 218-30. PMID 11697917 DOI: 10.1006/Mpev.2001.1036 |
0.371 |
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