Dennis Nielsen - Publications

Affiliations: 
University of Copenhagen, København, Denmark 

188 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Lanng SK, Zhang Y, Christensen KR, Hansen AK, Nielsen DS, Kot W, Bertram HC. Partial Substitution of Meat with Insect () in a Carnivore Diet Changes the Gut Microbiome and Metabolome of Healthy Rats. Foods (Basel, Switzerland). 10. PMID 34441592 DOI: 10.3390/foods10081814  1
2021 Atter A, Diaz M, Tano-Debrah K, Kunadu AP, Mayer MJ, Colquhoun IJ, Nielsen DS, Baker D, Narbad A, Amoa-Awua W. Microbial Diversity and Metabolite Profile of Fermenting Millet in the Production of , a Ghanaian Fermented Cereal Porridge. Frontiers in Microbiology. 12: 681983. PMID 34421842 DOI: 10.3389/fmicb.2021.681983  1
2021 Agergaard J, Zillmer MCF, Castro-Mejía JL, Mertz K, Kot W, Højfeldt G, van Hall G, Nielsen DS, Schjerling P, Holm L. Impaired skeletal muscle hypertrophy signaling and amino acid deprivation response in Apoe knockout mice with an unhealthy lipoprotein distribution. Scientific Reports. 11: 16423. PMID 34385572 DOI: 10.1038/s41598-021-96000-8  1
2021 Hui Y, Tamez-Hidalgo P, Cieplak T, Satessa GD, Kot W, Kjærulff S, Nielsen MO, Nielsen DS, Krych L. Supplementation of a lacto-fermented rapeseed-seaweed blend promotes gut microbial- and gut immune-modulation in weaner piglets. Journal of Animal Science and Biotechnology. 12: 85. PMID 34281627 DOI: 10.1186/s40104-021-00601-2  1
2021 Hui Y, Smith B, Mortensen MS, Krych L, Sørensen SJ, Greisen G, Krogfelt KA, Nielsen DS. The effect of early probiotic exposure on the preterm infant gut microbiome development. Gut Microbes. 13: 1951113. PMID 34264803 DOI: 10.1080/19490976.2021.1951113  1
2021 Lindenberg FC, Lützhøft DO, Krych L, Fielden J, Kot W, Frøkiær H, van Galen G, Nielsen DS, Hansen AK. An Oligosaccharide Rich Diet Increases spp. Bacteria in the Equine Microbiota. Frontiers in Microbiology. 12: 666039. PMID 34093482 DOI: 10.3389/fmicb.2021.666039  1
2021 Jakobsen LMA, Sundekilde UK, Andersen HJ, Kot W, Mejia JLC, Nielsen DS, Hansen AK, Bertram HC. Administration of Bovine Milk Oligosaccharide to Weaning Gnotobiotic Mice Inoculated with a Simplified Infant Type Microbiota. Microorganisms. 9. PMID 34066501 DOI: 10.3390/microorganisms9051003  1
2021 Jiang PP, Muk T, Krych L, Nielsen DS, Khakimov B, Li Y, Juhl SM, Greisen G, Sangild PT. Gut colonization in preterm infants supplemented with bovine colostrum in the first week of life: An explorative pilot study. Jpen. Journal of Parenteral and Enteral Nutrition. PMID 33988859 DOI: 10.1002/jpen.2191  1
2021 Li X, Hui Y, Leng B, Ren J, Song Y, Che L, Peng X, Huang B, Liu S, Li L, Nielsen DS, Li Y, Dai X, Zhao S. Millet-based supplement restored gut microbial diversity of acute malnourished pigs. Plos One. 16: e0250423. PMID 33914799 DOI: 10.1371/journal.pone.0250423  1
2021 Mertz KH, Reitelseder S, Bechshoeft R, Bulow J, Højfeldt G, Jensen M, Schacht SR, Lind MV, Rasmussen MA, Mikkelsen UR, Tetens I, Engelsen SB, Nielsen DS, Jespersen AP, Holm L. The effect of daily protein supplementation, with or without resistance training for 1 year, on muscle size, strength, and function in healthy older adults: A randomized controlled trial. The American Journal of Clinical Nutrition. PMID 33564844 DOI: 10.1093/ajcn/nqaa372  1
2021 Rasmussen TS, Jakobsen RR, Castro-Mejía JL, Kot W, Thomsen AR, Vogensen FK, Nielsen DS, Hansen AK. Inter-vendor variance of enteric eukaryotic DNA viruses in specific pathogen free C57BL/6N mice. Research in Veterinary Science. 136: 1-5. PMID 33548686 DOI: 10.1016/j.rvsc.2021.01.022  1
2021 Williams AR, Myhill LJ, Stolzenbach S, Nejsum P, Mejer H, Nielsen DS, Thamsborg SM. Emerging interactions between diet, gastrointestinal helminth infection, and the gut microbiota in livestock. Bmc Veterinary Research. 17: 62. PMID 33514383 DOI: 10.1186/s12917-021-02752-w  1
2021 Rasmussen TS, Streidl T, Hitch TCA, Wortmann E, Deptula P, Kofoed MVW, Riedel T, Neumann-Schaal M, Hansen M, Nielsen DS, Clavel T, Vogensen FK. gen. nov., sp. nov., a novel bacterium isolated from the caecum of an obese mouse. International Journal of Systematic and Evolutionary Microbiology. PMID 33512312 DOI: 10.1099/ijsem.0.004673  1
2021 Nabukeera-Barungi N, Lanyero B, Grenov B, Friis H, Namusoke H, Mupere E, Michaelsen KF, Mølgaard C, Wiese M, Nielsen DS, Mohammed MK, Christensen VB, Rytter M. Thymus size and its correlates among children admitted with severe acute malnutrition: a cross-sectional study in Uganda. Bmc Pediatrics. 21: 1. PMID 33397296 DOI: 10.1186/s12887-020-02457-3  1
2021 Brunse A, Offersen SM, Mosegaard JJ, Deng L, Damborg P, Nielsen DS, Sangild PT, Thymann T, Nguyen DN. Enteral broad-spectrum antibiotics antagonize the effect of fecal microbiota transplantation in preterm pigs. Gut Microbes. 13: 1-16. PMID 33382952 DOI: 10.1080/19490976.2020.1849997  1
2020 Nestel N, Hvass JD, Bahl MI, Hansen LH, Krych L, Nielsen DS, Dragsted LO, Roager HM. The Gut Microbiome and Abiotic Factors as Potential Determinants of Postprandial Glucose Responses: A Single-Arm Meal Study. Frontiers in Nutrition. 7: 594850. PMID 33585532 DOI: 10.3389/fnut.2020.594850  1
2020 Laigaard A, Krych L, Zachariassen LF, Ellegaard-Jensen L, Nielsen DS, Hansen AK, Hansen CHF. Dietary prebiotics promote intestinal Prevotella in association with a low-responding phenotype in a murine oxazolone-induced model of atopic dermatitis. Scientific Reports. 10: 21204. PMID 33273678 DOI: 10.1038/s41598-020-78404-0  1
2020 Jakobsen RR, Haahr T, Humaidan P, Jensen JS, Kot WP, Castro-Mejia JL, Deng L, Leser TD, Nielsen DS. Characterization of the Vaginal DNA Virome in Health and Dysbiosis. Viruses. 12. PMID 33050261 DOI: 10.3390/v12101143  1
2020 Rasmussen TS, Nielsen DS. [Bakteriofager - de hjælpsomme vira]. Ugeskrift For Laeger. 182. PMID 33000742  1
2020 Moreno-Indias I, Lundberg R, Krych L, Metzdorff SB, Kot W, Sørensen DB, Nielsen DS, Hansen CHF, Hansen AK. A Humanized Diet Profile May Facilitate Colonization and Immune Stimulation in Human Microbiota-Colonized Mice. Frontiers in Microbiology. 11: 1336. PMID 32636823 DOI: 10.3389/fmicb.2020.01336  1
2020 Wiese M, Hui Y, Nielsen DS, Williams AR, Lynegaard JC, Weber NR, Amdi C. Color of Colon Content of Normal and Intrauterine Growth-Restricted Weaned Piglets is Associated with Specific Microbial Taxa and Physiological Parameters. Animals : An Open Access Journal From Mdpi. 10. PMID 32580422 DOI: 10.3390/ani10061073  1
2020 Rasmussen TS, Koefoed AK, Jakobsen RR, Deng L, Castro-Mejía JL, Brunse A, Neve H, Vogensen FK, Nielsen DS. Bacteriophage-mediated manipulation of the gut microbiome - promises and presents limitations. Fems Microbiology Reviews. PMID 32495834 DOI: 10.1093/femsre/fuaa020  1
2020 Sørensen H, Skalshøi O, Nielsen DB, Jacobsen JS, Søballe K, Mechlenburg I. Hip muscle and joint contact forces before, 6 and 12 months after minimally invasive periacetabular osteotomy. Hip International : the Journal of Clinical and Experimental Research On Hip Pathology and Therapy. 1120700020925411. PMID 32366122 DOI: 10.1177/1120700020925411  1
2020 Jakobsen LMA, Maldonado-Gómez MX, Sundekilde UK, Andersen HJ, Nielsen DS, Bertram HC. Metabolic Effects of Bovine Milk Oligosaccharides on Selected Commensals of the Infant Microbiome-Commensalism and Postbiotic Effects. Metabolites. 10. PMID 32344519 DOI: 10.3390/metabo10040167  1
2020 Myhill LJ, Stolzenbach S, Mejer H, Jakobsen SR, Hansen TVA, Andersen D, Brix S, Hansen LH, Krych L, Nielsen DS, Nejsum P, Thamsborg SM, Williams AR. Fermentable Dietary Fiber Promotes Helminth Infection and Exacerbates Host Inflammatory Responses. Journal of Immunology (Baltimore, Md. : 1950). PMID 32284331 DOI: 10.4049/jimmunol.1901149  1
2020 Raun SH, Henriquez-Olguín C, Karavaeva I, Ali M, Møller LLV, Kot W, Castro-Mejía JL, Nielsen DS, Gerhart-Hines Z, Richter EA, Sylow L. Housing temperature influences exercise training adaptations in mice. Nature Communications. 11: 1560. PMID 32214091 DOI: 10.1038/s41467-020-15311-y  1
2020 Stolzenbach S, Myhill LJ, Andersen LO, Krych L, Mejer H, Williams AR, Nejsum P, Stensvold CR, Nielsen DS, Thamsborg SM. Dietary Inulin and Infection Promote Beneficial Bacteria Throughout the Porcine Gut. Frontiers in Microbiology. 11: 312. PMID 32194529 DOI: 10.3389/fmicb.2020.00312  1
2020 Rasmussen TS, Mentzel CMJ, Kot W, Castro-Mejía JL, Zuffa S, Swann JR, Hansen LH, Vogensen FK, Hansen AK, Nielsen DS. Faecal virome transplantation decreases symptoms of type 2 diabetes and obesity in a murine model. Gut. PMID 32165408 DOI: 10.1136/gutjnl-2019-320005  1
2020 De Pietri S, Ingham AC, Frandsen TL, Rathe M, Krych L, Castro-Mejía JL, Nielsen DS, Nersting J, Wehner PS, Schmiegelow K, Hasle H, Pamp SJ, Müller K. Gastrointestinal toxicity during induction treatment for childhood acute lymphoblastic leukemia: The impact of the gut microbiota. International Journal of Cancer. PMID 32115690 DOI: 10.1002/ijc.32942  1
2020 Ahnfeldt AM, Bæk O, Hui Y, Nielsen CH, Obelitz-Ryom K, Busk-Anderson T, Ruge A, Holst JJ, Rudloff S, Burrin D, Nguyen DN, Nielsen DS, Zachariassen G, Bering SB, Thymann T, et al. Nutrient Restriction has Limited Short-Term Effects on Gut, Immunity, and Brain Development in Preterm Pigs. The Journal of Nutrition. PMID 32069355 DOI: 10.1093/jn/nxaa030  1
2020 Hjorth MF, Christensen L, Larsen TM, Roager HM, Krych L, Kot W, Nielsen DS, Ritz C, Astrup A. Pretreatment Prevotella-to-Bacteroides ratio and salivary amylase gene copy number as prognostic markers for dietary weight loss. The American Journal of Clinical Nutrition. PMID 32034403 DOI: 10.1093/ajcn/nqaa007  1
2020 Rønne MHH, Cho D, Madsen MR, Jakobsen JB, Eom S, Escoudé É, Hammershøj HCD, Nielsen DU, Pedersen SU, Baik MH, Skrydstrup T, Daasbjerg K. Ligand Controlled Product Selectivity in the Electrochemical Carbon Dioxide Reduction Using Manganese Bipyridine Catalysts. Journal of the American Chemical Society. PMID 32022558 DOI: 10.1021/Jacs.9B11806  1
2020 Castro-Mejía JL, Khakimov B, Krych Ł, Bülow J, Bechshøft RL, Højfeldt G, Mertz KH, Garne ES, Schacht SR, Ahmad HF, Kot W, Hansen LH, Perez-Cueto FJA, Lind MV, Lassen AJ, ... ... Nielsen DS, et al. Physical fitness in community-dwelling older adults is linked to dietary intake, gut microbiota, and metabolomic signatures. Aging Cell. e13105. PMID 31967716 DOI: 10.1111/acel.13105  1
2020 Castro-Mejía JL, O'Ferrall S, Krych Ł, O'Mahony E, Namusoke H, Lanyero B, Kot W, Nabukeera-Barungi N, Michaelsen KF, Mølgaard C, Friis H, Grenov B, Nielsen DS. Restitution of gut microbiota in Ugandan children administered with probiotics ( GG and subsp. BB-12) during treatment for severe acute malnutrition. Gut Microbes. 1-12. PMID 31959047 DOI: 10.1080/19490976.2020.1712982  1
2020 Mathieu A, Dion M, Deng L, Tremblay D, Moncaut E, Shah SA, Stokholm J, Krogfelt KA, Schjørring S, Bisgaard H, Nielsen DS, Moineau S, Petit MA. Virulent coliphages in 1-year-old children fecal samples are fewer, but more infectious than temperate coliphages. Nature Communications. 11: 378. PMID 31953385 DOI: 10.1038/S41467-019-14042-Z  1
2020 Satessa GD, Tamez-Hidalgo P, Hui Y, Cieplak T, Krych L, Kjærulff S, Brunsgaard G, Nielsen DS, Nielsen MO. Impact of Dietary Supplementation of Fermented Rapeseed with or without Macroalgae on Performance and Health of Piglets Following Omission of Medicinal Zinc from Weaner Diets. Animals : An Open Access Journal From Mdpi. 10. PMID 31952154 DOI: 10.3390/ani10010137  1
2020 Hauptmann AL, Paulová P, Hansen LH, Sicheritz-Pontén T, Mulvad G, Nielsen DS. Microbiota in foods from Inuit traditional hunting. Plos One. 15: e0227819. PMID 31935269 DOI: 10.1371/journal.pone.0227819  1
2020 Stage M, Gustafsson AW, Jørgensen M, Vera-Jimenéz NI, Wielje M, Nielsen DS, Sandelin A, Chen Y, Baker A. Genomic and phenotypic stability of GG in an industrial production process. Applied and Environmental Microbiology. PMID 31924618 DOI: 10.1128/AEM.02780-19  0.01
2020 Hauptmann AL, Paulová P, Castro-Mejía JL, Hansen LH, Sicheritz-Pontén T, Mulvad G, Nielsen DS. The microbial composition of dried fish prepared according to Greenlandic Inuit traditions and industrial counterparts. Food Microbiology. 85: 103305. PMID 31500717 DOI: 10.1016/j.fm.2019.103305  1
2019 Krych Ł, Castro-Mejía JL, Forero-Junco LM, Moesby DN, Mikkelsen MB, Rasmussen MA, Sykulski M, Nielsen DS. DNA enrichment and tagmentation method for species-level identification and strain-level differentiation using ON-rep-seq. Communications Biology. 2: 369. PMID 31925212 DOI: 10.1038/s42003-019-0617-x  1
2019 Leng B, Sørensen MB, Kot W, Thymann T, Krych L, Nielsen DS. Severe gut microbiota dysbiosis caused by malnourishment can be partly restored during 3 weeks of refeeding with fortified corn-soy-blend in a piglet model of childhood malnutrition. Bmc Microbiology. 19: 277. PMID 31823731 DOI: 10.1186/s12866-019-1658-5  1
2019 Krych Ł, Castro-Mejía JL, Forero-Junco LM, Moesby DN, Mikkelsen MB, Rasmussen MA, Sykulski M, Nielsen DS. DNA enrichment and tagmentation method for species-level identification and strain-level differentiation using ON-rep-seq. Communications Biology. 2: 369. PMID 31633060 DOI: 10.1038/s42003-019-0617-x  1
2019 Lützhøft DO, Sánchez-Alcoholado L, Tougaard P, Junker Mentzel CM, Kot W, Nielsen DS, Hansen AK. Short communication: Gut microbial colonization of the mouse colon using faecal transfer was equally effective when comparing rectal inoculation and oral inoculation based on 16S rRNA sequencing. Research in Veterinary Science. 126: 227-232. PMID 31627163 DOI: 10.1016/j.rvsc.2019.09.009  1
2019 Zachariassen LF, Hansen AK, Krych L, Nielsen DS, Holm TL, Tougaard P, Hansen CHF. Cesarean section increases sensitivity to oxazolone-induced colitis in C57BL/6 mice. Mucosal Immunology. PMID 31554900 DOI: 10.1038/s41385-019-0207-8  1
2019 Christensen L, Vuholm S, Roager HM, Nielsen DS, Krych L, Kristensen M, Astrup A, Hjorth MF. Prevotella Abundance Predicts Weight Loss Success in Healthy, Overweight Adults Consuming a Whole-Grain Diet Ad Libitum: A Post Hoc Analysis of a 6-Wk Randomized Controlled Trial. The Journal of Nutrition. PMID 31504699 DOI: 10.1093/jn/nxz198  1
2019 Deng L, Silins R, Castro-Mejía JL, Kot W, Jessen L, Thorsen J, Shah S, Stokholm J, Bisgaard H, Moineau S, Nielsen DS. A Protocol for Extraction of Infective Viromes Suitable for Metagenomics Sequencing from Low Volume Fecal Samples. Viruses. 11. PMID 31330855 DOI: 10.3390/V11070667  1
2019 Wiese M, Bashmakov Y, Chalyk N, Nielsen DS, Krych Ł, Kot W, Klochkov V, Pristensky D, Bandaletova T, Chernyshova M, Kyle N, Petyaev I. Prebiotic Effect of Lycopene and Dark Chocolate on Gut Microbiome with Systemic Changes in Liver Metabolism, Skeletal Muscles and Skin in Moderately Obese Persons. Biomed Research International. 2019: 4625279. PMID 31317029 DOI: 10.1155/2019/4625279  1
2019 Ravn AK, Vilstrup MBT, Nørby P, Nielsen DU, Daasbjerg K, Skrydstrup T. A Carbon Isotope Labeling Strategy for β-Amino Acid Derivatives via Carbonylation of Azanickellacycles. Journal of the American Chemical Society. PMID 31310710 DOI: 10.1021/Jacs.9B05934  1
2019 Hansen EB, Nielsen DS, LaPointe G. Editorial: Microbial food and feed ingredients - reconciling tradition and novelty. Fems Microbiology Letters. 366. PMID 31271430 DOI: 10.1093/Femsle/Fnz130  0.08
2019 Jakobsen LMA, Sundekilde UK, Andersen HJ, Nielsen DS, Bertram HC. Lactose and Bovine Milk Oligosaccharides Synergistically Stimulate subsp. Growth in a Simplified Model of the Infant Gut Microbiome. Journal of Proteome Research. PMID 31264424 DOI: 10.1021/acs.jproteome.9b00211  1
2019 Bayili GR, Johansen P, Nielsen DS, Sawadogo-Lingani H, Ouedraogo GA, Diawara B, Jespersen L. Identification of the predominant microbiota during production of lait caillé, a spontaneously fermented milk product made in Burkina Faso. World Journal of Microbiology & Biotechnology. 35: 100. PMID 31222403 DOI: 10.1007/s11274-019-2672-3  1
2019 Ahmad HF, Schreiber L, Marshall IPG, Andersen PJ, Castro-Mejía JL, Nielsen DS. Draft Genome Sequence of Streptococcus anginosus Strain CALM001, Isolated from the Gut of an Elderly Dane. Microbiology Resource Announcements. 8. PMID 31196919 DOI: 10.1128/MRA.00379-19  1
2019 Papalexandratou Z, Kaasik K, Kauffmann LV, Skorstengaard A, Bouillon G, Espensen JL, Hansen LH, Jakobsen RR, Blennow A, Krych L, Castro-Mejía JL, Nielsen DS. Linking cocoa varietals and microbial diversity of Nicaraguan fine cocoa bean fermentations and their impact on final cocoa quality appreciation. International Journal of Food Microbiology. 304: 106-118. PMID 31176963 DOI: 10.1016/j.ijfoodmicro.2019.05.012  1
2019 Lanyero B, Grenov B, Barungi NN, Namusoke H, Michaelsen KF, Mupere E, Mølgaard C, Jiang P, Frøkiær H, Wiese M, Muhammed MK, Pesu H, Nielsen DS, Friis H, Rytter MJ, et al. Correlates of gut function in children hospitalized for severe acute malnutrition, a cross-sectional study in Uganda. Journal of Pediatric Gastroenterology and Nutrition. PMID 31169661 DOI: 10.1097/MPG.0000000000002381  1
2019 Hansen CHF, Larsen CS, Petersson HO, Zachariassen LF, Vegge A, Lauridsen C, Kot W, Krych Ł, Nielsen DS, Hansen AK. Targeting gut microbiota and barrier function with prebiotics to alleviate autoimmune manifestations in NOD mice. Diabetologia. PMID 31139852 DOI: 10.1007/s00125-019-4910-5  1
2019 Collin HP, Reis WJ, Nielsen DU, Lindhardt AT, Valle MS, Freitas RP, Skrydstrup T. COtab: Expedient and Safe Setup for Pd-Catalyzed Carbonylation Chemistry. Organic Letters. PMID 31117713 DOI: 10.1021/Acs.Orglett.9B01423  1
2019 Hansen AK, Nielsen DS, Krych L, Hansen CHF. Bacterial species to be considered in quality assurance of mice and rats. Laboratory Animals. 53: 281-291. PMID 31096877 DOI: 10.1177/0023677219834324  1
2019 Rasmussen TS, de Vries L, Kot W, Hansen LH, Castro-Mejía JL, Vogensen FK, Hansen AK, Nielsen DS. Mouse Vendor Influence on the Bacterial and Viral Gut Composition Exceeds the Effect of Diet. Viruses. 11. PMID 31086117 DOI: 10.3390/v11050435  1
2019 Kamal SS, Hyldig N, Krych Ł, Greisen G, Krogfelt KA, Zachariassen G, Nielsen DS. Impact of Early Exposure to Cefuroxime on the Composition of the Gut Microbiota in Infants Following Cesarean Delivery. The Journal of Pediatrics. PMID 31053348 DOI: 10.1016/j.jpeds.2019.03.001  1
2019 Li Z, Rasmussen TS, Rasmussen ML, Li J, Henríquez Olguín C, Kot W, Nielsen DS, Jensen TE. The Gut Microbiome on a Periodized Low-Protein Diet Is Associated With Improved Metabolic Health. Frontiers in Microbiology. 10: 709. PMID 31019501 DOI: 10.3389/fmicb.2019.00709  1
2019 Kihl P, Krych L, Deng L, Kildemoes AO, Laigaard A, Hansen LH, Hansen CHF, Buschard K, Nielsen DS, Hansen AK. Oral LPS Dosing Induces Local Immunological Changes in the Pancreatic Lymph Nodes in Mice. Journal of Diabetes Research. 2019: 1649279. PMID 30956991 DOI: 10.1155/2019/1649279  1
2019 Anjum M, Madsen JS, Nesme J, Jana B, Wiese M, Jasinskytė D, Nielsen DS, Sørensen SJ, Dalsgaard A, Moodley A, Bortolaia V, Guardabassi L. Fate of CMY-2-encoding plasmids introduced into the human fecal microbiota by exogenous . Antimicrobial Agents and Chemotherapy. PMID 30885897 DOI: 10.1128/AAC.02528-18  1
2019 Kamal SS, Andersen AD, Krych L, Lauridsen C, Sangild PT, Thymann T, Nielsen DS. Preterm Birth has Effects on Gut Colonization in Piglets Within the First 4 Weeks of Life. Journal of Pediatric Gastroenterology and Nutrition. PMID 30633109 DOI: 10.1097/MPG.0000000000002259  1
2019 Marcial-Coba MS, Knøchel S, Nielsen DS. Low-moisture food matrices as probiotic carriers. Fems Microbiology Letters. PMID 30629190 DOI: 10.1093/femsle/fnz006  1
2019 Andersen IR, Thorup K, Andersen MB, Olesen R, Mortensen FV, Nielsen DT, Rasmussen F. Texture in the monitoring of regorafenib therapy in patients with colorectal liver metastases. Acta Radiologica (Stockholm, Sweden : 1987). 284185118817940. PMID 30612433 DOI: 10.1177/0284185118817940  1
2019 Zachariassen LF, Krych L, Rasmussen SH, Nielsen DS, Kot W, Holm TL, Hansen AK, Hansen CHF. Cesarean Section Induces Microbiota-Regulated Immune Disturbances in C57BL/6 Mice. Journal of Immunology (Baltimore, Md. : 1950). 202: 142-150. PMID 30487172 DOI: 10.4049/jimmunol.1800666  1
2018 Gaggìa F, Baffoni L, Galiano M, Nielsen DS, Jakobsen RR, Castro-Mejía JL, Bosi S, Truzzi F, Musumeci F, Dinelli G, Di Gioia D. Kombucha Beverage from Green, Black and Rooibos Teas: A Comparative Study Looking at Microbiology, Chemistry and Antioxidant Activity. Nutrients. 11. PMID 30577416 DOI: 10.3390/nu11010001  1
2018 Marcial-Coba MS, Saaby L, Knøchel S, Nielsen DS. Dark chocolate as a stable carrier of microencapsulated Akkermansia muciniphila and Lactobacillus casei. Fems Microbiology Letters. PMID 30576460 DOI: 10.1093/femsle/fny290  1
2018 Tougaard P, Martinsen LO, Zachariassen LF, Krych L, Nielsen DS, Buus TB, Pedersen AE, Hansen AK, Skov S, Hansen CHF. TL1A Aggravates Cytokine-Induced Acute Gut Inflammation and Potentiates Infiltration of Intraepithelial Natural Killer Cells in Mice. Inflammatory Bowel Diseases. PMID 30462201 DOI: 10.1093/ibd/izy351  1
2018 Brunse A, Martin L, Rasmussen TS, Christensen L, Skovsted Cilieborg M, Wiese M, Khakimov B, Pieper R, Nielsen DS, Sangild PT, Thymann T. Effect of fecal microbiota transplantation route of administration on gut colonization and host response in preterm pigs. The Isme Journal. PMID 30367124 DOI: 10.1038/s41396-018-0301-z  1
2018 Marcial-Coba MS, Cieplak T, Cahú TB, Blennow A, Knøchel S, Nielsen DS. Viability of microencapsulated Akkermansia muciniphila and Lactobacillus plantarum during freeze-drying, storage and in vitro simulated upper gastrointestinal tract passage. Food & Function. PMID 30362482 DOI: 10.1039/c8fo01331d  1
2018 Andersen IR, Olesen R, Boysen AK, Jensen LH, Mortensen FV, Nielsen DT, Rasmussen F. Dynamic contrast-enhanced computed tomography as a potential biomarker in patients with metastatic colorectal cancer treated with regorafenib. Acta Radiologica (Stockholm, Sweden : 1987). 284185118806652. PMID 30348001 DOI: 10.1177/0284185118806652  1
2018 Andersen IR, Thorup K, Jepsen BN, Mortensen FV, Nielsen DT, Rasmussen F. Dynamic contrast-enhanced computed tomography in the treatment evaluation of patients with colorectal liver metastases treated with ablation: a feasibility study. Acta Radiologica (Stockholm, Sweden : 1987). 284185118806661. PMID 30335477 DOI: 10.1177/0284185118806661  1
2018 Obelitz-Ryom K, Rendboe AK, Nguyen DN, Rudloff S, Brandt AB, Nielsen DS, Heckmann AB, Chichlowski M, Sangild PT, Thymann T, Bering SB. Bovine Milk Oligosaccharides with Sialyllactose for Preterm Piglets. Nutrients. 10. PMID 30322051 DOI: 10.3390/Nu10101489  1
2018 Fuglsang E, Pizzolla A, Krych L, Nielsen DS, Brooks AG, Frøkiær H, Reading PC. Changes in Gut Microbiota Prior to Influenza A Virus Infection Do Not Affect Immune Responses in Pups or Juvenile Mice. Frontiers in Cellular and Infection Microbiology. 8: 319. PMID 30258820 DOI: 10.3389/fcimb.2018.00319  1
2018 Nielsen DU, Neumann KT, Skrydstrup T. New Directions in Transition Metal Catalyzed Carbonylation Chemistry. Chimia. 72: 606-609. PMID 30257735 DOI: 10.2533/Chimia.2018.606  1
2018 Nielsen ES, Garnås E, Jensen KJ, Hansen LH, Olsen PS, Ritz C, Krych L, Nielsen DS. Lacto-fermented sauerkraut improves symptoms in IBS patients independent of product pasteurisation - a pilot study. Food & Function. PMID 30256365 DOI: 10.1039/c8fo00968f  1
2018 Fuglsang E, Krych L, Lundsager MT, Nielsen DS, Frøkiaer H. Postnatal Administration of Lactobacillus rhamnosus HN001 Ameliorates Perinatal Broad-Spectrum Antibiotic-Induced Reduction in Myelopoiesis and T cell Activation in Mouse Pups. Molecular Nutrition & Food Research. e1800510. PMID 30211987 DOI: 10.1002/mnfr.201800510  1
2018 Houngbédji M, Johansen P, Padonou SW, Akissoé N, Arneborg N, Nielsen DS, Hounhouigan DJ, Jespersen L. Occurrence of lactic acid bacteria and yeasts at species and strain level during spontaneous fermentation of mawè, a cereal dough produced in West Africa. Food Microbiology. 76: 267-278. PMID 30166150 DOI: 10.1016/j.fm.2018.06.005  1
2018 Castro-Mejía JL, Deng L, Vogensen FK, Reyes A, Nielsen DS. Extraction and Purification of Viruses from Fecal Samples for Metagenome and Morphology Analyses. Methods in Molecular Biology (Clifton, N.J.). 1838: 49-57. PMID 30128989 DOI: 10.1007/978-1-4939-8682-8_5  1
2018 Ren S, Hui Y, Obelitz-Ryom K, Brandt AB, Kot W, Nielsen DS, Thymann T, Sangild PT, Nguyen DN. Neonatal gut and immune maturation is determined more by postnatal age than by post-conceptional age in moderately preterm pigs. American Journal of Physiology. Gastrointestinal and Liver Physiology. PMID 30118350 DOI: 10.1152/ajpgi.00169.2018  1
2018 Skrydstrup T, Neumann K, Donslund A, Andersen T, Nielsen D. Synthesis of Aliphatic Carboxamides Mediated by Nickel NN2-Pincer Complexes and Adaptation to Carbon Isotope-Labeling. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 30106491 DOI: 10.1002/Chem.201804077  1
2018 Grimaldi R, Gibson GR, Vulevic J, Giallourou N, Castro-Mejía JL, Hansen LH, Leigh Gibson E, Nielsen DS, Costabile A. A prebiotic intervention study in children with autism spectrum disorders (ASDs). Microbiome. 6: 133. PMID 30071894 DOI: 10.1186/s40168-018-0523-3  1
2018 Anjum M, Madsen JS, Espinosa-Gongora C, Jana B, Wiese M, Nielsen DS, Sørensen SJ, Moodley A, Bortolaia V, Guardabassi L. A culture-independent method for studying transfer of IncI1 plasmids from wild-type Escherichia coli in complex microbial communities. Journal of Microbiological Methods. PMID 30030013 DOI: 10.1016/j.mimet.2018.07.009  1
2018 Matzen RD, Zinck Leth-Espensen J, Jansson T, Nielsen DS, Lund MN, Matzen S. The Antibacterial Effect of Honey Derived from Various Danish Flora. Dermatology Research and Practice. 2018: 7021713. PMID 30018636 DOI: 10.1155/2018/7021713  0.01
2018 Boysen AK, Jensen M, Nielsen DT, Mortensen FV, Sørensen BS, Jensen AR, Spindler KL. Cell-free DNA and chemoembolization in patients with liver metastases from colorectal cancer. Oncology Letters. 16: 2654-2660. PMID 30013661 DOI: 10.3892/ol.2018.8925  1
2018 Thøgersen R, Castro-Mejía JL, Sundekilde UK, Hansen LH, Hansen AK, Nielsen DS, Bertram HC. Ingestion of an Inulin-Enriched Pork Sausage Product Positively Modulates the Gut Microbiome and Metabolome of Healthy Rats. Molecular Nutrition & Food Research. e1800608. PMID 30004630 DOI: 10.1002/mnfr.201800608  1
2018 Kobaek-Larsen M, Nielsen DS, Kot W, Krych Ł, Christensen LP, Baatrup G. Effect of the dietary polyacetylenes falcarinol and falcarindiol on the gut microbiota composition in a rat model of colorectal cancer. Bmc Research Notes. 11: 411. PMID 29945666 DOI: 10.1186/s13104-018-3527-y  1
2018 Nielsen DU, Neumann KT, Lindhardt AT, Skrydstrup T. Recent Developments in Carbonylation Chemistry Using [ C]CO, [ C]CO and [ C]CO. Journal of Labelled Compounds & Radiopharmaceuticals. PMID 29858516 DOI: 10.1002/Jlcr.3645  1
2018 Wille-Jørgensen P, Syk I, Smedh K, Laurberg S, Nielsen DT, Petersen SH, Renehan AG, Horváth-Puhó E, Påhlman L, Sørensen HT. Effect of More vs Less Frequent Follow-up Testing on Overall and Colorectal Cancer-Specific Mortality in Patients With Stage II or III Colorectal Cancer: The COLOFOL Randomized Clinical Trial. Jama. 319: 2095-2103. PMID 29800179 DOI: 10.1001/jama.2018.5623  0.01
2018 Sørensen H, Nielsen DB, Jacobsen JS, Søballe K, Mechlenburg I. Isokinetic dynamometry and gait analysis reveal different hip joint status in patients with hip dysplasia. Hip International : the Journal of Clinical and Experimental Research On Hip Pathology and Therapy. 1120700018773401. PMID 29739283 DOI: 10.1177/1120700018773401  1
2018 Castro-Mejía JL, Jakesevic M, Fabricius NF, Krych Ł, Nielsen DS, Kot W, Bendtsen KM, Vogensen FK, Hansen CHF, Hansen AK. Gut microbiota recovery and immune response in ampicillin-treated mice. Research in Veterinary Science. 118: 357-364. PMID 29653396 DOI: 10.1016/j.rvsc.2018.03.013  1
2018 Kihl P, Krych L, Buschard K, Wesley JD, Kot W, Hansen AK, Nielsen DS, von Herrath MG. Oral insulin does not alter gut microbiota composition of NOD mice. Diabetes/Metabolism Research and Reviews. e3010. PMID 29637693 DOI: 10.1002/dmrr.3010  1
2018 Rune I, Rolin B, Lykkesfeldt J, Nielsen DS, Krych Ł, Kanter JE, Bornfeldt KE, Kihl P, Buschard K, Josefsen K, Fels JJ, Mortensen A, Christoffersen B, Kirk RK, Hansen AK. Long-term Western diet fed apolipoprotein E-deficient rats exhibit only modest early atherosclerotic characteristics. Scientific Reports. 8: 5416. PMID 29615808 DOI: 10.1038/s41598-018-23835-z  1
2018 Muhammed MK, Olsen ML, Kot W, Neve H, Castro-Mejía JL, Janzen T, Hansen LH, Nielsen DS, Sørensen SJ, Heller KJ, Vogensen FK. Investigation of the bacteriophage community in induced lysates of undefined mesophilic mixed-strain DL-cultures using classical and metagenomic approaches. International Journal of Food Microbiology. 272: 61-72. PMID 29529425 DOI: 10.1016/j.ijfoodmicro.2018.02.012  1
2018 Cieplak T, Soffer N, Sulakvelidze A, Nielsen DS. A bacteriophage cocktail targeting Escherichia coli reduces E. coli in simulated gut conditions, while preserving a non-targeted representative commensal normal microbiota. Gut Microbes. 1-19. PMID 29517960 DOI: 10.1080/19490976.2018.1447291  1
2018 Wiese M, Khakimov B, Nielsen S, Sørensen H, van den Berg F, Nielsen DS. CoMiniGut-a small volume colon model for the screening of gut microbial fermentation processes. Peerj. 6: e4268. PMID 29372119 DOI: 10.7717/peerj.4268  1
2018 Jahn LJ, Mason B, Brøgger P, Toteva T, Nielsen DK, Thon G. Dependency of Heterochromatin Domains on Replication Factors. G3 (Bethesda, Md.). 8: 477-489. PMID 29187422 DOI: 10.1534/g3.117.300341  0.01
2017 Kieler IN, Shamzir Kamal S, Vitger AD, Nielsen DS, Lauridsen C, Bjornvad CR. Gut microbiota composition may relate to weight loss rate in obese pet dogs. Veterinary Medicine and Science. 3: 252-262. PMID 29152318 DOI: 10.1002/vms3.80  1
2017 Krych Ł, Kot W, Bendtsen KMB, Hansen AK, Vogensen FK, Nielsen DS. Have you tried spermine? A rapid and cost-effective method to eliminate dextran sodium sulfate inhibition of PCR and RT-PCR. Journal of Microbiological Methods. 144: 1-7. PMID 29107603 DOI: 10.1016/j.mimet.2017.10.015  1
2017 Skrydstrup T, Flinker M, Yin H, Juhl R, Eikeland E, Overgaard J, Nielsen D. Efficient Water Reduction with sp3-sp3 Diboron(4) Compounds: Application to Hydrogenations, H-D Exchange Reactions and Carbonyl Reductions. Angewandte Chemie (International Ed. in English). PMID 29076608 DOI: 10.1002/Anie.201709685  1
2017 Williams AR, Krych L, Fauzan Ahmad H, Nejsum P, Skovgaard K, Nielsen DS, Thamsborg SM. A polyphenol-enriched diet and Ascaris suum infection modulate mucosal immune responses and gut microbiota composition in pigs. Plos One. 12: e0186546. PMID 29028844 DOI: 10.1371/journal.pone.0186546  1
2017 Vuholm S, Nielsen DS, Iversen KN, Suhr J, Westermann P, Krych L, Andersen JR, Kristensen M. Whole-Grain Rye and Wheat Affect Some Markers of Gut Health without Altering the Fecal Microbiota in Healthy Overweight Adults: A 6-Week Randomized Trial. The Journal of Nutrition. PMID 28954842 DOI: 10.3945/jn.117.250647  1
2017 Jensen MT, Rønne MH, Ravn AK, Juhl RW, Nielsen DU, Hu XM, Pedersen SU, Daasbjerg K, Skrydstrup T. Scalable carbon dioxide electroreduction coupled to carbonylation chemistry. Nature Communications. 8: 489. PMID 28887452 DOI: 10.1038/S41467-017-00559-8  1
2017 Muhammed MK, Kot W, Neve H, Mahony J, Castro-Mejía JL, Krych L, Hansen LH, Nielsen DS, Sørensen SJ, Heller KJ, van Sinderen D, Vogensen FK. Metagenomic Analysis of Dairy Bacteriophages: Extraction Method and Pilot Study on Whey Samples Derived from Using Undefined and Defined Mesophilic Starter Cultures. Applied and Environmental Microbiology. PMID 28754704 DOI: 10.1128/AEM.00888-17  1
2017 Marcial-Coba MS, Marshall IPG, Schreiber L, Nielsen DS. High-Quality Draft Genome Sequence of Lactobacillus casei Strain Z11, Isolated from a Human Adult Intestinal Biopsy Sample. Genome Announcements. 5. PMID 28705981 DOI: 10.1128/Genomea.00634-17  1
2017 Williams AR, Hansen TVA, Krych L, Ahmad HFB, Nielsen DS, Skovgaard K, Thamsborg SM. Dietary cinnamaldehyde enhances acquisition of specific antibodies following helminth infection in pigs. Veterinary Immunology and Immunopathology. 189: 43-52. PMID 28669386 DOI: 10.1016/j.vetimm.2017.06.004  1
2017 Muhammed MK, Krych L, Nielsen DS, Vogensen FK. A high-throughput qPCR system for simultaneous quantitative detection of dairy Lactococcus lactis and Leuconostoc bacteriophages. Plos One. 12: e0174223. PMID 28339484 DOI: 10.1371/journal.pone.0174223  1
2017 Zachariassen LF, Krych L, Engkilde K, Nielsen DS, Kot W, Hansen CH, Hansen AK. Sensitivity to oxazolone induced dermatitis is transferable with gut microbiota in mice. Scientific Reports. 7: 44385. PMID 28290517 DOI: 10.1038/srep44385  1
2017 Staanum PF, Arveschoug AK, Kramer SM, Nielsen JE, Nielsen DT, Ott P, Grønbæk H, Villadsen GE. [Nuclear medicine techniques for selective internal radiotherapy of liver cancer]. Ugeskrift For Laeger. 179. PMID 28074772  1
2016 Lian Z, Nielsen DU, Lindhardt AT, Daasbjerg K, Skrydstrup T. Cooperative redox activation for carbon dioxide conversion. Nature Communications. 7: 13782. PMID 27981967 DOI: 10.1038/Ncomms13782  1
2016 Bohn MB, Petersen AK, Nielsen DB, Sørensen H, Lind M. Three-dimensional kinematic and kinetic analysis of knee rotational stability in ACL-deficient patients during walking, running and pivoting. Journal of Experimental Orthopaedics. 3: 27. PMID 27730595 DOI: 10.1186/s40634-016-0062-4  1
2016 Laursen TL, Rødgaard-Hansen S, Møller HJ, Mortensen C, Karlsen S, Nielsen DT, Frevert S, Clemmesen JO, Møller S, Jensen JS, Bendtsen F, Grønbaek H. The soluble mannose receptor is released from the liver in cirrhotic patients, but is not associated with bacterial translocation. Liver International : Official Journal of the International Association For the Study of the Liver. PMID 27706896 DOI: 10.1111/liv.13262  1
2016 Olsen EV, Christensen LB, Nielsen DB. A review of computed tomography and manual dissection for calibration of devices for pig carcass classification - Evaluation of uncertainty. Meat Science. 123: 35-44. PMID 27614178 DOI: 10.1016/j.meatsci.2016.08.013  1
2016 Oguntoyinbo FA, Cho GS, Trierweiler B, Kabisch J, Rösch N, Neve H, Bockelmann W, Frommherz L, Nielsen DS, Krych L, Franz CM. Fermentation of African kale (Brassica carinata) using L. plantarum BFE 5092 and L. fermentum BFE 6620 starter strains. International Journal of Food Microbiology. 238: 103-112. PMID 27614122 DOI: 10.1016/j.ijfoodmicro.2016.08.030  1
2016 Slyngborg M, Nielsen DA, Fojan P. The Physical Properties and Self-Assembly Potential of the RFFFR Peptide. Chembiochem : a European Journal of Chemical Biology. 17: 2083-2092. PMID 27581944 DOI: 10.1002/cbic.201600383  0.01
2016 Bechshøft RL, Reitelseder S, Højfeldt G, Castro-Mejía JL, Khakimov B, Ahmad HF, Kjær M, Engelsen SB, Johansen SM, Rasmussen MA, Lassen AJ, Jensen T, Beyer N, Serena A, Perez-Cueto FJ, ... Nielsen DS, et al. Counteracting Age-related Loss of Skeletal Muscle Mass: a clinical and ethnological trial on the role of protein supplementation and training load (CALM Intervention Study): study protocol for a randomized controlled trial. Trials. 17: 397. PMID 27507236 DOI: 10.1186/s13063-016-1512-0  1
2016 Zachariassen G, Hyldig N, Joergensen J, Nielsen D, Greisen G. The half‐life and exposure of Cefuroxime varied in newborn infants after a Caesarean section Acta Paediatrica. 105: 1074-1078. PMID 27240549 DOI: 10.1111/Apa.13489  1
2016 Castro-Mejía J, Jakesevic M, Krych Ł, Nielsen DS, Hansen LH, Sondergaard BC, Kvist PH, Hansen AK, Holm TL. Treatment with a Monoclonal Anti-IL-12p40 Antibody Induces Substantial Gut Microbiota Changes in an Experimental Colitis Model. Gastroenterology Research and Practice. 2016: 4953120. PMID 26880890 DOI: 10.1155/2016/4953120  1
2016 Jensen MT, Juhl M, Nielsen DU, Jacobsen MF, Lindhardt AT, Skrydstrup T. Palladium-Catalyzed Carbonylative α-Arylation of tert-Butyl Cyanoacetate with (Hetero)aryl Bromides. The Journal of Organic Chemistry. 81: 1358-66. PMID 26807594 DOI: 10.1021/Acs.Joc.5B02897  1
2016 Papalexandratou Z, Nielsen DS. It's Gettin' Hot in Here: Breeding Robust Yeast Starter Cultures for Cocoa Fermentation. Trends in Microbiology. 24: 168-170. PMID 26803379 DOI: 10.1016/j.tim.2016.01.003  0.01
2016 Rune I, Rolin B, Larsen C, Nielsen DS, Kanter JE, Bornfeldt KE, Lykkesfeldt J, Buschard K, Kirk RK, Christoffersen B, Fels JJ, Josefsen K, Kihl P, Hansen AK. Modulating the Gut Microbiota Improves Glucose Tolerance, Lipoprotein Profile and Atherosclerotic Plaque Development in ApoE-Deficient Mice. Plos One. 11: e0146439. PMID 26799618 DOI: 10.1371/Journal.Pone.0146439  1
2016 Damlund DS, Metzdorff SB, Hasselby JP, Wiese M, Lundsager M, Nielsen DS, Buschard KS, Hansen AK, Frøkiær H. Postnatal Hematopoiesis and Gut Microbiota in NOD Mice Deviate from C57BL/6 Mice. Journal of Diabetes Research. 2016: 6321980. PMID 26783537 DOI: 10.1155/2016/6321980  1
2016 Kristensen KH, Wiese M, Rytter MJ, Özçam M, Hansen LH, Namusoke H, Friis H, Nielsen DS. Gut Microbiota in Children Hospitalized with Oedematous and Non-Oedematous Severe Acute Malnutrition in Uganda. Plos Neglected Tropical Diseases. 10: e0004369. PMID 26771456 DOI: 10.1371/journal.pntd.0004369  1
2015 Birck MM, Nguyen DN, Cilieborg MS, Kamal SS, Nielsen DS, Damborg P, Olsen JE, Lauridsen C, Sangild PT, Thymann T. Enteral but not parenteral antibiotics enhance gut function and prevent necrotizing enterocolitis in formula-fed newborn preterm pigs. American Journal of Physiology. Gastrointestinal and Liver Physiology. ajpgi.00392.2015. PMID 26680737 DOI: 10.1152/ajpgi.00392.2015  1
2015 Bendtsen KM, Fisker L, Hansen AK, Hansen CH, Nielsen DS. The influence of the young microbiome on inflammatory diseases-Lessons from animal studies. Birth Defects Research. Part C, Embryo Today : Reviews. PMID 26663871 DOI: 10.1002/bdrc.21116  1
2015 Castro-Mejía JL, Muhammed MK, Kot W, Neve H, Franz CM, Hansen LH, Vogensen FK, Nielsen DS. Optimizing protocols for extraction of bacteriophages prior to metagenomic analyses of phage communities in the human gut. Microbiome. 3: 64. PMID 26577924 DOI: 10.1186/s40168-015-0131-4  1
2015 Nguyen DN, Fuglsang E, Jiang P, Birck MM, Pan X, Kamal SB, Pors SE, Gammelgaard PL, Nielsen DS, Thymann T, Levy O, Frøkiær H, Sangild PT. Oral antibiotics increase blood neutrophil maturation and reduce bacteremia and necrotizing enterocolitis in the immediate postnatal period of preterm pigs. Innate Immunity. PMID 26561386 DOI: 10.1177/1753425915615195  1
2015 Vestergaard B, Krych Ł, Lund LR, Jørgensen BP, Hansen L, Jensen HE, Nielsen DS, Hansen AK. Colonic Lesions, Cytokine Profiles, and Gut Microbiota in Plasminogen-Deficient Mice. Comparative Medicine. 65: 382-97. PMID 26473342  1
2015 Skalshøi O, Iversen CH, Nielsen DB, Jacobsen J, Mechlenburg I, Søballe K, Sørensen H. Walking patterns and hip contact forces in patients with hip dysplasia. Gait & Posture. PMID 26365370 DOI: 10.1016/j.gaitpost.2015.08.008  1
2015 Bharadwaz A, Bak-Fredslund KP, Villadsen GE, Nielsen JE, Simonsen K, Sandahl TD, Grønbæk H, Nielsen DT. Combination of radiofrequency ablation with transarterial chemoembolization for treatment of hepatocellular carcinoma: experience from a Danish tertiary liver center. Acta Radiologica (Stockholm, Sweden : 1987). PMID 26342009 DOI: 10.1177/0284185115603246  1
2015 Ouoba LI, Vouidibio A, Thorsen L, Anyogu A, Nielsen DS, Kobawila SC, Sutherland JP. Lysinibacillus louembei sp. nov., a novel spore-forming bacterium isolated from Ntoba Mbodi, alkaline fermented leaves of cassava from The Republic of Congo. International Journal of Systematic and Evolutionary Microbiology. PMID 26333923 DOI: 10.1099/ijsem.0.000570  1
2015 Hansen AK, Krych Ł, Nielsen DS, Hansen CH. A Review of Applied Aspects of Dealing with Gut Microbiota Impact on Rodent Models. Ilar Journal / National Research Council, Institute of Laboratory Animal Resources. 56: 250-64. PMID 26323634 DOI: 10.1093/ilar/ilv010  1
2015 Ouoba LI, Nielsen DS, Anyogu A, Kando C, Diawara B, Jespersen L, Sutherland JP. Hanseniaspora jakobsenii sp. nov., a yeast isolated from Bandji, a traditional palm wine of Borassus akeassii. International Journal of Systematic and Evolutionary Microbiology. 65: 3576-9. PMID 26297247 DOI: 10.1099/ijsem.0.000461  1
2015 Jensen C, Penny JØ, Nielsen DB, Overgaard S, Holsgaard-Larsen A. Quantifying Gait Quality in Patients with Large-Head and Conventional Total Hip Arthroplasty-A Prospective Cohort Study. The Journal of Arthroplasty. PMID 26278486 DOI: 10.1016/j.arth.2015.06.049  1
2015 Skovgaard A, Castro-Mejia JL, Hansen LH, Nielsen DS. Host-Specific and pH-Dependent Microbiomes of Copepods in an Extensive Rearing System. Plos One. 10: e0132516. PMID 26167852 DOI: 10.1371/journal.pone.0132516  1
2015 Shen RL, Thymann T, Østergaard MV, Støy AC, Krych ?, Nielsen DS, Lauridsen C, Hartmann B, Holst JJ, Burrin DG, Sangild PT. Early gradual feeding with bovine colostrum improves gut function and NEC resistance relative to infant formula in preterm pigs. American Journal of Physiology. Gastrointestinal and Liver Physiology. ajpgi.00163.2015. PMID 26138468 DOI: 10.1152/ajpgi.00163.2015  1
2015 Rasmussen HM, Nielsen DB, Pedersen NW, Overgaard S, Holsgaard-Larsen A. Gait Deviation Index, Gait Profile Score and Gait Variable Score in children with spastic cerebral palsy: Intra-rater reliability and agreement across two repeated sessions. Gait & Posture. 42: 133-7. PMID 26043670 DOI: 10.1016/j.gaitpost.2015.04.019  1
2015 Jensen C, Rosenlund S, Nielsen DB, Overgaard S, Holsgaard-Larsen A. The use of the Gait Deviation Index for the evaluation of participants following total hip arthroplasty: An explorative randomized trial. Gait & Posture. 42: 36-41. PMID 25957650 DOI: 10.1016/j.gaitpost.2015.02.009  1
2015 Hall M, Nielsen JH, Holsgaard-Larsen A, Nielsen DB, Creaby MW, Thorlund JB. Forward lunge knee biomechanics before and after partial meniscectomy. The Knee. PMID 25907262 DOI: 10.1016/j.knee.2015.03.005  1
2015 Jensen KL, Nielsen DU, Jamison TF. A General Strategy for the Synthesis of Enantiomerically Pure Azetidines and Aziridines through Nickel-Catalyzed Cross-Coupling. Chemistry (Weinheim An Der Bergstrasse, Germany). 21: 7379-83. PMID 25820027 DOI: 10.1002/Chem.201500886  1
2015 Pyndt Jørgensen B, Winther G, Kihl P, Nielsen DS, Wegener G, Hansen AK, Sørensen DB. Dietary magnesium deficiency affects gut microbiota and anxiety-like behaviour in C57BL/6N mice. Acta Neuropsychiatrica. 1-5. PMID 25773775 DOI: 10.1017/neu.2015.10  1
2015 Østergaard MV, Shen RL, Støy AC, Skovgaard K, Krych ?, Leth SS, Nielsen DS, Hartmann B, Bering SB, Schmidt M, Sangild PT. Provision of Amniotic Fluid During Parenteral Nutrition Increases Weight Gain With Limited Effects on Gut Structure, Function, Immunity, and Microbiology in Newborn Preterm Pigs. Jpen. Journal of Parenteral and Enteral Nutrition. PMID 25613990 DOI: 10.1177/0148607114566463  1
2015 Vermeulen A, Marvig CL, Daelman J, Xhaferi R, Nielsen DS, Devlieghere F. Strategies to increase the stability of intermediate moisture foods towards Zygosaccharomyces rouxii: the effect of temperature, ethanol, pH and water activity, with or without the influence of organic acids. Food Microbiology. 45: 119-25. PMID 25481068 DOI: 10.1016/J.Fm.2014.01.003  1
2014 Nielsen DH, Gehrchen M, Hansen LV, Walbom J, Dahl B. Inter- and Intra-rater Agreement in Assessment of Adult Spinal Deformity Using the Scoliosis Research Society-Schwab Classification. Spine Deformity. 2: 40-47. PMID 27927441 DOI: 10.1016/j.jspd.2013.09.005  1
2014 Hansen AK, Hansen CH, Krych L, Nielsen DS. Impact of the gut microbiota on rodent models of human disease. World Journal of Gastroenterology : Wjg. 20: 17727-36. PMID 25548471 DOI: 10.3748/wjg.v20.i47.17727  1
2014 Jacobsen JS, Nielsen DB, Sørensen H, Søballe K, Mechlenburg I. Joint kinematics and kinetics during walking and running in 32 patients with hip dysplasia 1 year after periacetabular osteotomy. Acta Orthopaedica. 85: 592-9. PMID 25191933 DOI: 10.3109/17453674.2014.960167  1
2014 Pyndt Jørgensen B, Hansen JT, Krych L, Larsen C, Klein AB, Nielsen DS, Josefsen K, Hansen AK, Sørensen DB. A possible link between food and mood: dietary impact on gut microbiota and behavior in BALB/c mice. Plos One. 9: e103398. PMID 25133574 DOI: 10.1371/Journal.Pone.0103398  1
2014 Ellekilde M, Selfjord E, Larsen CS, Jakesevic M, Rune I, Tranberg B, Vogensen FK, Nielsen DS, Bahl MI, Licht TR, Hansen AK, Hansen CH. Transfer of gut microbiota from lean and obese mice to antibiotic-treated mice. Scientific Reports. 4: 5922. PMID 25082483 DOI: 10.1038/srep05922  1
2014 Morgen SS, Nielsen DH, Larsen CF, Søgaard R, Engelholm SA, Dahl B. Moderate precision of prognostic scoring systems in a consecutive, prospective cohort of 544 patients with metastatic spinal cord compression. Journal of Cancer Research and Clinical Oncology. 140: 2059-64. PMID 25035249 DOI: 10.1007/s00432-014-1776-2  1
2014 Marvig CL, Kristiansen RM, Madsen MG, Nielsen DS. Identification and characterisation of organisms associated with chocolate pralines and sugar syrups used for their production. International Journal of Food Microbiology. 185: 167-76. PMID 24997272 DOI: 10.1016/j.ijfoodmicro.2014.05.017  1
2014 Hansen CH, Andersen LS, Krych L, Metzdorff SB, Hasselby JP, Skov S, Nielsen DS, Buschard K, Hansen LH, Hansen AK. Mode of delivery shapes gut colonization pattern and modulates regulatory immunity in mice. Journal of Immunology (Baltimore, Md. : 1950). 193: 1213-22. PMID 24951818 DOI: 10.4049/jimmunol.1400085  1
2014 Nielsen DS, Krych Ł, Buschard K, Hansen CH, Hansen AK. Beyond genetics. Influence of dietary factors and gut microbiota on type 1 diabetes. Febs Letters. 588: 4234-43. PMID 24746688 DOI: 10.1016/j.febslet.2014.04.010  1
2014 Wallrodt I, Jelsbak L, Thomsen LE, Brix L, Lemire S, Gautier L, Nielsen DS, Jovanovic G, Buck M, Olsen JE. Removal of the phage-shock protein PspB causes reduction of virulence in Salmonella enterica serovar Typhimurium independently of NRAMP1. Journal of Medical Microbiology. 63: 788-95. PMID 24713356 DOI: 10.1099/jmm.0.072223-0  1
2014 Lescot C, Nielsen DU, Makarov IS, Lindhardt AT, Daasbjerg K, Skrydstrup T. Efficient fluoride-catalyzed conversion of CO2 to CO at room temperature. Journal of the American Chemical Society. 136: 6142-7. PMID 24702475 DOI: 10.1021/Ja502911E  1
2014 Hansen CH, Krych L, Buschard K, Metzdorff SB, Nellemann C, Hansen LH, Nielsen DS, Frøkiær H, Skov S, Hansen AK. A maternal gluten-free diet reduces inflammation and diabetes incidence in the offspring of NOD mice. Diabetes. 63: 2821-32. PMID 24696449 DOI: 10.2337/db13-1612  1
2014 Ramos CL, Thorsen L, Ryssel M, Nielsen DS, Siegumfeldt H, Schwan RF, Jespersen L. Effect of the gastrointestinal environment on pH homeostasis of Lactobacillus plantarum and Lactobacillus brevis cells as measured by real-time fluorescence ratio-imaging microscopy. Research in Microbiology. 165: 215-25. PMID 24607712 DOI: 10.1016/j.resmic.2014.02.005  1
2014 Andersen KJ, Grønbaek H, Villadsen GE, Knudsen AR, Ott P, Vildstrup H, Nielsen DT, Bharadwaz A. Chemoembolization of intermediate stage hepatocellular carcinomas: results from a Nordic tertiary liver cancer center. Indian Journal of Gastroenterology : Official Journal of the Indian Society of Gastroenterology. 33: 322-9. PMID 24307495 DOI: 10.1007/s12664-013-0428-9  1
2013 Korsager S, Nielsen DU, Taaning RH, Lindhardt AT, Skrydstrup T. Direct route to 1,3-diketones by palladium-catalyzed carbonylative coupling of aryl halides with acetylacetone. Chemistry (Weinheim An Der Bergstrasse, Germany). 19: 17687-91. PMID 24353081 DOI: 10.1002/Chem.201303872  1
2013 Nielsen DU, Lescot C, Gøgsig TM, Lindhardt AT, Skrydstrup T. Pd-catalyzed carbonylative α-arylation of aryl bromides: scope and mechanistic studies. Chemistry (Weinheim An Der Bergstrasse, Germany). 19: 17926-38. PMID 24265100 DOI: 10.1002/Chem.201303384  1
2013 Nagy E, Niss M, Dlauchy D, Arneborg N, Nielsen DS, Péter G. Yarrowia divulgata f.a., sp. nov., a yeast species from animal-related and marine sources. International Journal of Systematic and Evolutionary Microbiology. 63: 4818-23. PMID 24158944 DOI: 10.1099/ijs.0.057208-0  1
2013 Tranberg B, Hellgren LI, Lykkesfeldt J, Sejrsen K, Jeamet A, Rune I, Ellekilde M, Nielsen DS, Hansen AK. Whey protein reduces early life weight gain in mice fed a high-fat diet. Plos One. 8: e71439. PMID 23940754 DOI: 10.1371/journal.pone.0071439  1
2013 Korsager S, Nielsen DU, Taaning RH, Skrydstrup T. Access to β-keto esters by palladium-catalyzed carbonylative coupling of aryl halides with monoester potassium malonates. Angewandte Chemie (International Ed. in English). 52: 9763-6. PMID 23881598 DOI: 10.1002/Anie.201304072  1
2013 Crafack M, Mikkelsen MB, Saerens S, Knudsen M, Blennow A, Lowor S, Takrama J, Swiegers JH, Petersen GB, Heimdal H, Nielsen DS. Influencing cocoa flavour using Pichia kluyveri and Kluyveromyces marxianus in a defined mixed starter culture for cocoa fermentation. International Journal of Food Microbiology. 167: 103-16. PMID 23866910 DOI: 10.1016/j.ijfoodmicro.2013.06.024  1
2013 Mortensen C, Karlsen S, Grønbæk H, Nielsen DT, Frevert S, Clemmesen JO, Møller S, Jensen JS, Bendtsen F. No difference in portal and hepatic venous bacterial DNA in patients with cirrhosis undergoing transjugular intrahepatic portosystemic shunt insertion. Liver International : Official Journal of the International Association For the Study of the Liver. 33: 1309-15. PMID 23763259 DOI: 10.1111/liv.12205  1
2013 Krych L, Hansen CH, Hansen AK, van den Berg FW, Nielsen DS. Quantitatively different, yet qualitatively alike: a meta-analysis of the mouse core gut microbiome with a view towards the human gut microbiome. Plos One. 8: e62578. PMID 23658749 DOI: 10.1371/journal.pone.0062578  1
2013 Adimpong DB, Nielsen DS, Sørensen KI, Vogensen FK, Sawadogo-Lingani H, Derkx PM, Jespersen L. Lactobacillus delbrueckii subsp. jakobsenii subsp. nov., isolated from dolo wort, an alcoholic fermented beverage in Burkina Faso. International Journal of Systematic and Evolutionary Microbiology. 63: 3720-6. PMID 23645015 DOI: 10.1099/ijs.0.048769-0  1
2013 Jacobsen JS, Nielsen DB, Sørensen H, Søballe K, Mechlenburg I. Changes in walking and running in patients with hip dysplasia. Acta Orthopaedica. 84: 265-70. PMID 23594221 DOI: 10.3109/17453674.2013.792030  1
2013 Agbobatinkpo PB, Thorsen L, Nielsen DS, Azokpota P, Akissoe N, Hounhouigan JD, Jakobsen M. Biodiversity of aerobic endospore-forming bacterial species occurring in Yanyanku and Ikpiru, fermented seeds of Hibiscus sabdariffa used to produce food condiments in Benin. International Journal of Food Microbiology. 163: 231-8. PMID 23571124 DOI: 10.1016/j.ijfoodmicro.2013.02.008  1
2013 Akabanda F, Owusu-Kwarteng J, Tano-Debrah K, Glover RL, Nielsen DS, Jespersen L. Taxonomic and molecular characterization of lactic acid bacteria and yeasts in nunu, a Ghanaian fermented milk product. Food Microbiology. 34: 277-83. PMID 23541194 DOI: 10.1016/j.fm.2012.09.025  1
2013 Adimpong DB, Sørensen KI, Nielsen DS, Thorsen L, Rasmussen TB, Derkx PM, Jespersen L. Draft Whole-Genome Sequence of Bacillus sonorensis Strain L12, a Source of Nonribosomal Lipopeptides. Genome Announcements. 1: e0009713. PMID 23538904 DOI: 10.1128/genomeA.00097-13  1
2013 Compaoré CS, Nielsen DS, Ouoba LI, Berner TS, Nielsen KF, Sawadogo-Lingani H, Diawara B, Ouédraogo GA, Jakobsen M, Thorsen L. Co-production of surfactin and a novel bacteriocin by Bacillus subtilis subsp. subtilis H4 isolated from Bikalga, an African alkaline Hibiscus sabdariffa seed fermented condiment. International Journal of Food Microbiology. 162: 297-307. PMID 23466466 DOI: 10.1016/j.ijfoodmicro.2013.01.013  1
2013 Neumann AB, Andersen SD, Nielsen DT, Holland-Fischer P, Vilstrup H, Grønbæk H. Treatment of Budd-Chiari syndrome with a focus on transjugular intrahepatic portosystemic shunt. World Journal of Hepatology. 5: 38-42. PMID 23383365 DOI: 10.4254/wjh.v5.i1.38  1
2013 Kaboré D, Nielsen DS, Sawadogo-Lingani H, Diawara B, Dicko MH, Jakobsen M, Thorsen L. Inhibition of Bacillus cereus growth by bacteriocin producing Bacillus subtilis isolated from fermented baobab seeds (maari) is substrate dependent. International Journal of Food Microbiology. 162: 114-9. PMID 23376785 DOI: 10.1016/j.ijfoodmicro.2012.12.027  1
2013 Hansen CH, Holm TL, Krych Ł, Andresen L, Nielsen DS, Rune I, Hansen AK, Skov S. Gut microbiota regulates NKG2D ligand expression on intestinal epithelial cells. European Journal of Immunology. 43: 447-57. PMID 23136011 DOI: 10.1002/eji.201242462  1
2012 Lundberg R, Clausen SK, Pang W, Nielsen DS, Möller K, Josefsen KE, Hansen AK. Gastrointestinal microbiota and local inflammation during oxazolone-induced dermatitis in BALB/cA mice. Comparative Medicine. 62: 371-80. PMID 23114040  1
2012 Pang W, Stradiotto D, Krych L, Karlskov-Mortensen P, Vogensen FK, Nielsen DS, Fredholm M, Hansen AK. Selective inbreeding does not increase gut microbiota similarity in BALB/c mice. Laboratory Animals. 46: 335-7. PMID 23097567 DOI: 10.1258/la.2012.012040  1
2012 Bangsgaard Bendtsen KM, Krych L, Sørensen DB, Pang W, Nielsen DS, Josefsen K, Hansen LH, Sørensen SJ, Hansen AK. Gut microbiota composition is correlated to grid floor induced stress and behavior in the BALB/c mouse. Plos One. 7: e46231. PMID 23056268 DOI: 10.1371/journal.pone.0046231  1
2012 Adimpong DB, Sørensen KI, Thorsen L, Stuer-Lauridsen B, Abdelgadir WS, Nielsen DS, Derkx PM, Jespersen L. Antimicrobial susceptibility of Bacillus strains isolated from primary starters for African traditional bread production and characterization of the bacitracin operon and bacitracin biosynthesis. Applied and Environmental Microbiology. 78: 7903-14. PMID 22941078 DOI: 10.1128/AEM.00730-12  1
2012 Owusu-Kwarteng J, Akabanda F, Nielsen DS, Tano-Debrah K, Glover RL, Jespersen L. Identification of lactic acid bacteria isolated during traditional fura processing in Ghana. Food Microbiology. 32: 72-8. PMID 22850376 DOI: 10.1016/j.fm.2012.04.010  1
2012 Nielsen DU, Neumann K, Taaning RH, Lindhardt AT, Modvig A, Skrydstrup T. Palladium-catalyzed double carbonylation using near stoichiometric carbon monoxide: expedient access to substituted 13C2-labeled phenethylamines. The Journal of Organic Chemistry. 77: 6155-65. PMID 22725263 DOI: 10.1021/Jo3009337  1
2012 Pang W, Vogensen FK, Nielsen DS, Hansen AK. Faecal and caecal microbiota profiles of mice do not cluster in the same way. Laboratory Animals. 46: 231-6. PMID 22723645 DOI: 10.1258/la.2012.011128  1
2012 Karlsen S, Nielsen DT, Grønbæk H. [Chronic Budd-Chiari syndrome can cause liver cirrhosis]. Ugeskrift For Laeger. 174: 1677-9. PMID 22681996  1
2012 Adimpong DB, Nielsen DS, Sørensen KI, Derkx PM, Jespersen L. Genotypic characterization and safety assessment of lactic acid bacteria from indigenous African fermented food products. Bmc Microbiology. 12: 75. PMID 22594449 DOI: 10.1186/1471-2180-12-75  1
2012 Gøgsig TM, Nielsen DU, Lindhardt AT, Skrydstrup T. Palladium catalyzed carbonylative Heck reaction affording monoprotected 1,3-ketoaldehydes. Organic Letters. 14: 2536-9. PMID 22564004 DOI: 10.1021/Ol300837D  1
2012 Andersen MAE, Nielsen D, Thomsen OC. Separation of common and differential mode conducted emission: Power combiner/splitters Renewable Energy & Power Quality Journal. 707-712. DOI: 10.24084/Repqj10.440  0.01
2004 Nissen P, Nielsen D, Arneborg N. The relative glucose uptake abilities of non-Saccharomyces yeasts play a role in their coexistence with Saccharomyces cerevisiae in mixed cultures. Applied Microbiology and Biotechnology. 64: 543-550. PMID 14689245 DOI: 10.1007/S00253-003-1487-0  1
2003 Nissen P, Nielsen D, Arneborg N. Viable Saccharomyces cerevisiae cells at high concentrations cause early growth arrest of non-Saccharomyces yeasts in mixed cultures by a cell-cell contact-mediated mechanism. Yeast. 20: 331-341. PMID 12627399 DOI: 10.1002/Yea.965  1
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