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Dennis Nielsen - Publications

Affiliations: 
University of Copenhagen, København, Denmark 
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Year Citation  Score
2023 Mühlematter C, Nielsen DS, Castro-Mejía JL, Brown SA, Rasch B, Wright KP, Walser JC, Schoch SF, Kurth S. Not simply a matter of parents-Infants' sleep-wake patterns are associated with their regularity of eating. Plos One. 18: e0291441. PMID 37796923 DOI: 10.1371/journal.pone.0291441  0.454
Low-probability matches (unlikely to be authored by this person)
2016 Zachariassen G, Hyldig N, Joergensen J, Nielsen D, Greisen G. The half‐life and exposure of Cefuroxime varied in newborn infants after a Caesarean section Acta Paediatrica. 105: 1074-1078. PMID 27240549 DOI: 10.1111/Apa.13489  0.276
2021 Jakobsen LMA, Sundekilde UK, Andersen HJ, Kot W, Mejia JLC, Nielsen DS, Hansen AK, Bertram HC. Administration of Bovine Milk Oligosaccharide to Weaning Gnotobiotic Mice Inoculated with a Simplified Infant Type Microbiota. Microorganisms. 9. PMID 34066501 DOI: 10.3390/microorganisms9051003  0.237
2003 Nissen P, Nielsen D, Arneborg N. Viable Saccharomyces cerevisiae cells at high concentrations cause early growth arrest of non-Saccharomyces yeasts in mixed cultures by a cell-cell contact-mediated mechanism. Yeast. 20: 331-341. PMID 12627399 DOI: 10.1002/Yea.965  0.235
2018 Wiese M, Khakimov B, Nielsen S, Sørensen H, van den Berg F, Nielsen DS. CoMiniGut-a small volume colon model for the screening of gut microbial fermentation processes. Peerj. 6: e4268. PMID 29372119 DOI: 10.7717/peerj.4268  0.233
2015 Vermeulen A, Marvig CL, Daelman J, Xhaferi R, Nielsen DS, Devlieghere F. Strategies to increase the stability of intermediate moisture foods towards Zygosaccharomyces rouxii: the effect of temperature, ethanol, pH and water activity, with or without the influence of organic acids. Food Microbiology. 45: 119-25. PMID 25481068 DOI: 10.1016/J.Fm.2014.01.003  0.232
2004 Nissen P, Nielsen D, Arneborg N. The relative glucose uptake abilities of non-Saccharomyces yeasts play a role in their coexistence with Saccharomyces cerevisiae in mixed cultures. Applied Microbiology and Biotechnology. 64: 543-550. PMID 14689245 DOI: 10.1007/S00253-003-1487-0  0.224
2019 Jakobsen LMA, Sundekilde UK, Andersen HJ, Nielsen DS, Bertram HC. Lactose and Bovine Milk Oligosaccharides Synergistically Stimulate subsp. Growth in a Simplified Model of the Infant Gut Microbiome. Journal of Proteome Research. PMID 31264424 DOI: 10.1021/acs.jproteome.9b00211  0.224
2021 Hui Y, Smith B, Mortensen MS, Krych L, Sørensen SJ, Greisen G, Krogfelt KA, Nielsen DS. The effect of early probiotic exposure on the preterm infant gut microbiome development. Gut Microbes. 13: 1951113. PMID 34264803 DOI: 10.1080/19490976.2021.1951113  0.214
2018 Obelitz-Ryom K, Rendboe AK, Nguyen DN, Rudloff S, Brandt AB, Nielsen DS, Heckmann AB, Chichlowski M, Sangild PT, Thymann T, Bering SB. Bovine Milk Oligosaccharides with Sialyllactose for Preterm Piglets. Nutrients. 10. PMID 30322051 DOI: 10.3390/Nu10101489  0.208
2021 Jiang PP, Muk T, Krych L, Nielsen DS, Khakimov B, Li Y, Juhl SM, Greisen G, Sangild PT. Gut colonization in preterm infants supplemented with bovine colostrum in the first week of life: An explorative pilot study. Jpen. Journal of Parenteral and Enteral Nutrition. PMID 33988859 DOI: 10.1002/jpen.2191  0.205
2019 Kamal SS, Andersen AD, Krych L, Lauridsen C, Sangild PT, Thymann T, Nielsen DS. Preterm Birth has Effects on Gut Colonization in Piglets Within the First 4 Weeks of Life. Journal of Pediatric Gastroenterology and Nutrition. PMID 30633109 DOI: 10.1097/MPG.0000000000002259  0.205
2022 Overgaard Poulsen K, Astono J, Jakobsen RR, Uldbjerg N, Fuglsang J, Nielsen DS, Sundekilde UK. Influence of maternal body mass index on human milk composition and associations to infant metabolism and gut colonisation: MAINHEALTH - a study protocol for an observational birth cohort. Bmj Open. 12: e059552. PMID 36323479 DOI: 10.1136/bmjopen-2021-059552  0.204
2015 Shen RL, Thymann T, Østergaard MV, Støy AC, Krych ?, Nielsen DS, Lauridsen C, Hartmann B, Holst JJ, Burrin DG, Sangild PT. Early gradual feeding with bovine colostrum improves gut function and NEC resistance relative to infant formula in preterm pigs. American Journal of Physiology. Gastrointestinal and Liver Physiology. ajpgi.00163.2015. PMID 26138468 DOI: 10.1152/ajpgi.00163.2015  0.201
2007 Nielsen S, Nielsen DS, Lauritzen L, Jakobsen M, Michaelsen KF. Impact of diet on the intestinal microbiota in 10-month-old infants. Journal of Pediatric Gastroenterology and Nutrition. 44: 613-8. PMID 17460496 DOI: 10.1097/MPG.0b013e3180406a11  0.193
2015 Østergaard MV, Shen RL, Støy AC, Skovgaard K, Krych ?, Leth SS, Nielsen DS, Hartmann B, Bering SB, Schmidt M, Sangild PT. Provision of Amniotic Fluid During Parenteral Nutrition Increases Weight Gain With Limited Effects on Gut Structure, Function, Immunity, and Microbiology in Newborn Preterm Pigs. Jpen. Journal of Parenteral and Enteral Nutrition. PMID 25613990 DOI: 10.1177/0148607114566463  0.192
2018 Brunse A, Martin L, Rasmussen TS, Christensen L, Skovsted Cilieborg M, Wiese M, Khakimov B, Pieper R, Nielsen DS, Sangild PT, Thymann T. Effect of fecal microbiota transplantation route of administration on gut colonization and host response in preterm pigs. The Isme Journal. PMID 30367124 DOI: 10.1038/s41396-018-0301-z  0.191
2015 Birck MM, Nguyen DN, Cilieborg MS, Kamal SS, Nielsen DS, Damborg P, Olsen JE, Lauridsen C, Sangild PT, Thymann T. Enteral but not parenteral antibiotics enhance gut function and prevent necrotizing enterocolitis in formula-fed newborn preterm pigs. American Journal of Physiology. Gastrointestinal and Liver Physiology. ajpgi.00392.2015. PMID 26680737 DOI: 10.1152/ajpgi.00392.2015  0.191
2020 Jakobsen LMA, Maldonado-Gómez MX, Sundekilde UK, Andersen HJ, Nielsen DS, Bertram HC. Metabolic Effects of Bovine Milk Oligosaccharides on Selected Commensals of the Infant Microbiome-Commensalism and Postbiotic Effects. Metabolites. 10. PMID 32344519 DOI: 10.3390/metabo10040167  0.19
2019 Kamal SS, Hyldig N, Krych Ł, Greisen G, Krogfelt KA, Zachariassen G, Nielsen DS. Impact of Early Exposure to Cefuroxime on the Composition of the Gut Microbiota in Infants Following Cesarean Delivery. The Journal of Pediatrics. PMID 31053348 DOI: 10.1016/j.jpeds.2019.03.001  0.189
2021 Brunse A, Offersen SM, Mosegaard JJ, Deng L, Damborg P, Nielsen DS, Sangild PT, Thymann T, Nguyen DN. Enteral broad-spectrum antibiotics antagonize the effect of fecal microbiota transplantation in preterm pigs. Gut Microbes. 13: 1-16. PMID 33382952 DOI: 10.1080/19490976.2020.1849997  0.179
2021 Brunse A, Deng L, Pan X, Hui Y, Castro-Mejía JL, Kot W, Nguyen DN, Secher JB, Nielsen DS, Thymann T. Fecal filtrate transplantation protects against necrotizing enterocolitis. The Isme Journal. PMID 34552194 DOI: 10.1038/s41396-021-01107-5  0.177
2021 Li X, Hui Y, Leng B, Ren J, Song Y, Che L, Peng X, Huang B, Liu S, Li L, Nielsen DS, Li Y, Dai X, Zhao S. Millet-based supplement restored gut microbial diversity of acute malnourished pigs. Plos One. 16: e0250423. PMID 33914799 DOI: 10.1371/journal.pone.0250423  0.171
2012 Andersen MAE, Nielsen D, Thomsen OC. Separation of common and differential mode conducted emission: Power combiner/splitters Renewable Energy & Power Quality Journal. 707-712. DOI: 10.24084/Repqj10.440  0.168
2022 Hui Y, Vestergaard G, Deng L, Kot WP, Thymann T, Brunse A, Nielsen DS. Donor-dependent fecal microbiota transplantation efficacy against necrotizing enterocolitis in preterm pigs. Npj Biofilms and Microbiomes. 8: 48. PMID 35680942 DOI: 10.1038/s41522-022-00310-2  0.167
2019 Papalexandratou Z, Kaasik K, Kauffmann LV, Skorstengaard A, Bouillon G, Espensen JL, Hansen LH, Jakobsen RR, Blennow A, Krych L, Castro-Mejía JL, Nielsen DS. Linking cocoa varietals and microbial diversity of Nicaraguan fine cocoa bean fermentations and their impact on final cocoa quality appreciation. International Journal of Food Microbiology. 304: 106-118. PMID 31176963 DOI: 10.1016/j.ijfoodmicro.2019.05.012  0.164
2020 Ahnfeldt AM, Bæk O, Hui Y, Nielsen CH, Obelitz-Ryom K, Busk-Anderson T, Ruge A, Holst JJ, Rudloff S, Burrin D, Nguyen DN, Nielsen DS, Zachariassen G, Bering SB, Thymann T, et al. Nutrient Restriction has Limited Short-Term Effects on Gut, Immunity, and Brain Development in Preterm Pigs. The Journal of Nutrition. PMID 32069355 DOI: 10.1093/jn/nxaa030  0.164
2019 Lindenberg F, Krych L, Kot W, Fielden J, Frøkiær H, van Galen G, Nielsen DS, Hansen AK. Development of the equine gut microbiota. Scientific Reports. 9: 14427. PMID 31594971 DOI: 10.1038/s41598-019-50563-9  0.164
2018 Castro-Mejía JL, Jakesevic M, Fabricius NF, Krych Ł, Nielsen DS, Kot W, Bendtsen KM, Vogensen FK, Hansen CHF, Hansen AK. Gut microbiota recovery and immune response in ampicillin-treated mice. Research in Veterinary Science. 118: 357-364. PMID 29653396 DOI: 10.1016/j.rvsc.2018.03.013  0.164
2018 Ren S, Hui Y, Obelitz-Ryom K, Brandt AB, Kot W, Nielsen DS, Thymann T, Sangild PT, Nguyen DN. Neonatal gut and immune maturation is determined more by postnatal age than by post-conceptional age in moderately preterm pigs. American Journal of Physiology. Gastrointestinal and Liver Physiology. PMID 30118350 DOI: 10.1152/ajpgi.00169.2018  0.162
2012 Hansen CH, Nielsen DS, Kverka M, Zakostelska Z, Klimesova K, Hudcovic T, Tlaskalova-Hogenova H, Hansen AK. Patterns of early gut colonization shape future immune responses of the host. Plos One. 7: e34043. PMID 22479515 DOI: 10.1371/journal.pone.0034043  0.159
2012 Pang W, Stradiotto D, Krych L, Karlskov-Mortensen P, Vogensen FK, Nielsen DS, Fredholm M, Hansen AK. Selective inbreeding does not increase gut microbiota similarity in BALB/c mice. Laboratory Animals. 46: 335-7. PMID 23097567 DOI: 10.1258/la.2012.012040  0.157
2015 Nguyen DN, Fuglsang E, Jiang P, Birck MM, Pan X, Kamal SB, Pors SE, Gammelgaard PL, Nielsen DS, Thymann T, Levy O, Frøkiær H, Sangild PT. Oral antibiotics increase blood neutrophil maturation and reduce bacteremia and necrotizing enterocolitis in the immediate postnatal period of preterm pigs. Innate Immunity. PMID 26561386 DOI: 10.1177/1753425915615195  0.156
2007 Nielsen DS, Teniola OD, Ban-Koffi L, Owusu M, Andersson TS, Holzapfel WH. The microbiology of Ghanaian cocoa fermentations analysed using culture-dependent and culture-independent methods International Journal of Food Microbiology. 114: 168-186. PMID 17161485 DOI: 10.1016/j.ijfoodmicro.2006.09.010  0.154
2015 Skovgaard A, Castro-Mejia JL, Hansen LH, Nielsen DS. Host-Specific and pH-Dependent Microbiomes of Copepods in an Extensive Rearing System. Plos One. 10: e0132516. PMID 26167852 DOI: 10.1371/journal.pone.0132516  0.154
2020 Stolzenbach S, Myhill LJ, Andersen LO, Krych L, Mejer H, Williams AR, Nejsum P, Stensvold CR, Nielsen DS, Thamsborg SM. Dietary Inulin and Infection Promote Beneficial Bacteria Throughout the Porcine Gut. Frontiers in Microbiology. 11: 312. PMID 32194529 DOI: 10.3389/fmicb.2020.00312  0.154
2022 Svanberg Frisinger F, Pirolo M, Ng DYK, Mao X, Nielsen DS, Guardabassi L. Impact of the Gram-Negative-Selective Inhibitor MAC13243 on In Vitro Simulated Gut Microbiota. Pharmaceuticals (Basel, Switzerland). 15. PMID 35745650 DOI: 10.3390/ph15060731  0.152
2019 Leng B, Sørensen MB, Kot W, Thymann T, Krych L, Nielsen DS. Severe gut microbiota dysbiosis caused by malnourishment can be partly restored during 3 weeks of refeeding with fortified corn-soy-blend in a piglet model of childhood malnutrition. Bmc Microbiology. 19: 277. PMID 31823731 DOI: 10.1186/s12866-019-1658-5  0.151
2020 Satessa GD, Tamez-Hidalgo P, Hui Y, Cieplak T, Krych L, Kjærulff S, Brunsgaard G, Nielsen DS, Nielsen MO. Impact of Dietary Supplementation of Fermented Rapeseed with or without Macroalgae on Performance and Health of Piglets Following Omission of Medicinal Zinc from Weaner Diets. Animals : An Open Access Journal From Mdpi. 10. PMID 31952154 DOI: 10.3390/ani10010137  0.15
2021 Lindenberg FC, Lützhøft DO, Krych L, Fielden J, Kot W, Frøkiær H, van Galen G, Nielsen DS, Hansen AK. An Oligosaccharide Rich Diet Increases spp. Bacteria in the Equine Microbiota. Frontiers in Microbiology. 12: 666039. PMID 34093482 DOI: 10.3389/fmicb.2021.666039  0.15
2019 Rasmussen TS, de Vries L, Kot W, Hansen LH, Castro-Mejía JL, Vogensen FK, Hansen AK, Nielsen DS. Mouse Vendor Influence on the Bacterial and Viral Gut Composition Exceeds the Effect of Diet. Viruses. 11. PMID 31086117 DOI: 10.3390/v11050435  0.149
2020 Laigaard A, Krych L, Zachariassen LF, Ellegaard-Jensen L, Nielsen DS, Hansen AK, Hansen CHF. Dietary prebiotics promote intestinal Prevotella in association with a low-responding phenotype in a murine oxazolone-induced model of atopic dermatitis. Scientific Reports. 10: 21204. PMID 33273678 DOI: 10.1038/s41598-020-78404-0  0.148
2018 Cieplak T, Soffer N, Sulakvelidze A, Nielsen DS. A bacteriophage cocktail targeting Escherichia coli reduces E. coli in simulated gut conditions, while preserving a non-targeted representative commensal normal microbiota. Gut Microbes. 1-19. PMID 29517960 DOI: 10.1080/19490976.2018.1447291  0.148
2014 Hansen AK, Hansen CH, Krych L, Nielsen DS. Impact of the gut microbiota on rodent models of human disease. World Journal of Gastroenterology : Wjg. 20: 17727-36. PMID 25548471 DOI: 10.3748/wjg.v20.i47.17727  0.148
2023 Bonde CS, Mejer H, Myhill LJ, Zhu L, Jensen P, Büdeyri Gökgöz N, Krych L, Nielsen DS, Skovgaard K, Thamsborg SM, Williams AR. Dietary seaweed (Saccharina latissima) supplementation in pigs induces localized immunomodulatory effects and minor gut microbiota changes during intestinal helminth infection. Scientific Reports. 13: 21931. PMID 38081984 DOI: 10.1038/s41598-023-49082-5  0.148
2015 Tougaard P, Skov S, Pedersen AE, Krych L, Nielsen DS, Bahl MI, Christensen EG, Licht TR, Poulsen SS, Metzdorff SB, Hansen AK, Hansen CH. TL1A regulates TCRγδ+ intraepithelial lymphocytes and gut microbial composition. European Journal of Immunology. 45: 865-75. PMID 25404161 DOI: 10.1002/eji.201444528  0.148
2023 Shah SA, Deng L, Thorsen J, Pedersen AG, Dion MB, Castro-Mejía JL, Silins R, Romme FO, Sausset R, Jessen LE, Ndela EO, Hjelmsø M, Rasmussen MA, Redgwell TA, Leal Rodríguez C, ... ... Nielsen DS, et al. Expanding known viral diversity in the healthy infant gut. Nature Microbiology. PMID 37037943 DOI: 10.1038/s41564-023-01345-7  0.147
2021 Lanng SK, Zhang Y, Christensen KR, Hansen AK, Nielsen DS, Kot W, Bertram HC. Partial Substitution of Meat with Insect () in a Carnivore Diet Changes the Gut Microbiome and Metabolome of Healthy Rats. Foods (Basel, Switzerland). 10. PMID 34441592 DOI: 10.3390/foods10081814  0.146
2020 Nestel N, Hvass JD, Bahl MI, Hansen LH, Krych L, Nielsen DS, Dragsted LO, Roager HM. The Gut Microbiome and Abiotic Factors as Potential Determinants of Postprandial Glucose Responses: A Single-Arm Meal Study. Frontiers in Nutrition. 7: 594850. PMID 33585532 DOI: 10.3389/fnut.2020.594850  0.145
2013 Tranberg B, Hellgren LI, Lykkesfeldt J, Sejrsen K, Jeamet A, Rune I, Ellekilde M, Nielsen DS, Hansen AK. Whey protein reduces early life weight gain in mice fed a high-fat diet. Plos One. 8: e71439. PMID 23940754 DOI: 10.1371/journal.pone.0071439  0.145
2010 Hufeldt MR, Nielsen DS, Vogensen FK, Midtvedt T, Hansen AK. Family relationship of female breeders reduce the systematic inter-individual variation in the gut microbiota of inbred laboratory mice. Laboratory Animals. 44: 283-9. PMID 20713427 DOI: 10.1258/la.2010.010058  0.145
2023 Rasmussen TS, Mentzel CMJ, Danielsen MR, Jakobsen RR, Zachariassen LSF, Castro Mejia JL, Brunse A, Hansen LH, Hansen CHF, Hansen AK, Nielsen DS. Fecal virome transfer improves proliferation of commensal gut and unexpectedly enhances the fertility rate in laboratory mice. Gut Microbes. 15: 2208504. PMID 37150906 DOI: 10.1080/19490976.2023.2208504  0.144
2019 Zachariassen LF, Krych L, Rasmussen SH, Nielsen DS, Kot W, Holm TL, Hansen AK, Hansen CHF. Cesarean Section Induces Microbiota-Regulated Immune Disturbances in C57BL/6 Mice. Journal of Immunology (Baltimore, Md. : 1950). 202: 142-150. PMID 30487172 DOI: 10.4049/jimmunol.1800666  0.144
2015 Marvig CL, Kristiansen RM, Nielsen DS. Growth/no growth models for Zygosaccharomyces rouxii associated with acidic, sweet intermediate moisture food products. International Journal of Food Microbiology. 192: 51-7. PMID 25306299 DOI: 10.1016/j.ijfoodmicro.2014.09.021  0.143
2013 Crafack M, Mikkelsen MB, Saerens S, Knudsen M, Blennow A, Lowor S, Takrama J, Swiegers JH, Petersen GB, Heimdal H, Nielsen DS. Influencing cocoa flavour using Pichia kluyveri and Kluyveromyces marxianus in a defined mixed starter culture for cocoa fermentation. International Journal of Food Microbiology. 167: 103-16. PMID 23866910 DOI: 10.1016/j.ijfoodmicro.2013.06.024  0.143
2014 Hansen CH, Andersen LS, Krych L, Metzdorff SB, Hasselby JP, Skov S, Nielsen DS, Buschard K, Hansen LH, Hansen AK. Mode of delivery shapes gut colonization pattern and modulates regulatory immunity in mice. Journal of Immunology (Baltimore, Md. : 1950). 193: 1213-22. PMID 24951818 DOI: 10.4049/jimmunol.1400085  0.142
2019 Hansen CHF, Larsen CS, Petersson HO, Zachariassen LF, Vegge A, Lauridsen C, Kot W, Krych Ł, Nielsen DS, Hansen AK. Targeting gut microbiota and barrier function with prebiotics to alleviate autoimmune manifestations in NOD mice. Diabetologia. PMID 31139852 DOI: 10.1007/s00125-019-4910-5  0.141
2015 Bendtsen KM, Fisker L, Hansen AK, Hansen CH, Nielsen DS. The influence of the young microbiome on inflammatory diseases-Lessons from animal studies. Birth Defects Research. Part C, Embryo Today : Reviews. PMID 26663871 DOI: 10.1002/bdrc.21116  0.141
2014 Ellekilde M, Selfjord E, Larsen CS, Jakesevic M, Rune I, Tranberg B, Vogensen FK, Nielsen DS, Bahl MI, Licht TR, Hansen AK, Hansen CH. Transfer of gut microbiota from lean and obese mice to antibiotic-treated mice. Scientific Reports. 4: 5922. PMID 25082483 DOI: 10.1038/srep05922  0.14
2019 Cieplak T, Wiese M, Nielsen S, Van de Wiele T, van den Berg F, Nielsen DS. The Smallest Intestine (TSI)-a low volume in vitro model of the small intestine with increased throughput. Fems Microbiology Letters. 365. PMID 30247563 DOI: 10.1093/femsle/fny231  0.14
2009 Sengun IY, Nielsen DS, Karapinar M, Jakobsen M. Identification of lactic acid bacteria isolated from Tarhana, a traditional Turkish fermented food. International Journal of Food Microbiology. 135: 105-11. PMID 19703719 DOI: 10.1016/j.ijfoodmicro.2009.07.033  0.139
2009 Wilfrid Padonou S, Nielsen DS, Hounhouigan JD, Thorsen L, Nago MC, Jakobsen M. The microbiota of Lafun, an African traditional cassava food product. International Journal of Food Microbiology. 133: 22-30. PMID 19493582 DOI: 10.1016/j.ijfoodmicro.2009.04.019  0.139
2014 Marvig CL, Kristiansen RM, Madsen MG, Nielsen DS. Identification and characterisation of organisms associated with chocolate pralines and sugar syrups used for their production. International Journal of Food Microbiology. 185: 167-76. PMID 24997272 DOI: 10.1016/j.ijfoodmicro.2014.05.017  0.139
2018 Nielsen ES, Garnås E, Jensen KJ, Hansen LH, Olsen PS, Ritz C, Krych L, Nielsen DS. Lacto-fermented sauerkraut improves symptoms in IBS patients independent of product pasteurisation - a pilot study. Food & Function. PMID 30256365 DOI: 10.1039/c8fo00968f  0.139
2004 Nielsen DS, Møller PL, Rosenfeldt V, Paerregaard A, Michaelsen KF, Jakobsen M. Case study of the distribution of mucosa-associated Bifidobacterium species, Lactobacillus species, and other lactic acid bacteria in the human colon. Applied and Environmental Microbiology. 69: 7545-8. PMID 14660412 DOI: 10.1128/AEM.69.12.7545-7548.2003  0.139
2021 Christensen IB, Vedel C, Clausen ML, Kjærulff S, Agner T, Nielsen DS. Targeted Screening of Lactic Acid Bacteria With Antibacterial Activity Toward Clonal Complex Type 1 Associated With Atopic Dermatitis. Frontiers in Microbiology. 12: 733847. PMID 34603263 DOI: 10.3389/fmicb.2021.733847  0.139
2021 Atter A, Diaz M, Tano-Debrah K, Kunadu AP, Mayer MJ, Colquhoun IJ, Nielsen DS, Baker D, Narbad A, Amoa-Awua W. Microbial Diversity and Metabolite Profile of Fermenting Millet in the Production of , a Ghanaian Fermented Cereal Porridge. Frontiers in Microbiology. 12: 681983. PMID 34421842 DOI: 10.3389/fmicb.2021.681983  0.139
2014 Crafack M, Keul H, Eskildsen CE, Petersen MA, Saerens S, Blennow A, Skovmand-Larsen M, Swiegers JH, Petersen GB, Heimdal H, Nielsen DS. Impact of starter cultures and fermentation techniques on the volatile aroma and sensory profile of chocolate Food Research International. 63: 306-316. DOI: 10.1016/j.foodres.2014.04.032  0.138
2020 Wiese M, Hui Y, Nielsen DS, Williams AR, Lynegaard JC, Weber NR, Amdi C. Color of Colon Content of Normal and Intrauterine Growth-Restricted Weaned Piglets is Associated with Specific Microbial Taxa and Physiological Parameters. Animals : An Open Access Journal From Mdpi. 10. PMID 32580422 DOI: 10.3390/ani10061073  0.138
2012 Adimpong DB, Nielsen DS, Sørensen KI, Derkx PM, Jespersen L. Genotypic characterization and safety assessment of lactic acid bacteria from indigenous African fermented food products. Bmc Microbiology. 12: 75. PMID 22594449 DOI: 10.1186/1471-2180-12-75  0.137
2022 Jakobsen RR, Trinh JT, Bomholtz L, Brok-Lauridsen SK, Sulakvelidze A, Nielsen DS. A Bacteriophage Cocktail Significantly Reduces without Deleterious Impact on the Commensal Gut Microbiota under Simulated Gastrointestinal Conditions. Viruses. 14. PMID 35215782 DOI: 10.3390/v14020190  0.136
2014 Ellekilde M, Krych L, Hansen CH, Hufeldt MR, Dahl K, Hansen LH, Sørensen SJ, Vogensen FK, Nielsen DS, Hansen AK. Characterization of the gut microbiota in leptin deficient obese mice - Correlation to inflammatory and diabetic parameters. Research in Veterinary Science. 96: 241-50. PMID 24556473 DOI: 10.1016/j.rvsc.2014.01.007  0.136
2012 Bech-Nielsen GV, Hansen CH, Hufeldt MR, Nielsen DS, Aasted B, Vogensen FK, Midtvedt T, Hansen AK. Manipulation of the gut microbiota in C57BL/6 mice changes glucose tolerance without affecting weight development and gut mucosal immunity. Research in Veterinary Science. 92: 501-8. PMID 21543097 DOI: 10.1016/j.rvsc.2011.04.005  0.136
2021 Myhill LJ, Stolzenbach S, Mejer H, Krych L, Jakobsen SR, Kot W, Skovgaard K, Canibe N, Nejsum P, Nielsen DS, Thamsborg SM, Williams AR. Parasite-Probiotic Interactions in the Gut: sp. and Regulate Type-2 Inflammatory Responses and Modify the Gut Microbiota of Pigs During Helminth Infection. Frontiers in Immunology. 12: 793260. PMID 35069576 DOI: 10.3389/fimmu.2021.793260  0.136
2017 Muhammed MK, Kot W, Neve H, Mahony J, Castro-Mejía JL, Krych L, Hansen LH, Nielsen DS, Sørensen SJ, Heller KJ, van Sinderen D, Vogensen FK. Metagenomic Analysis of Dairy Bacteriophages: Extraction Method and Pilot Study on Whey Samples Derived from Using Undefined and Defined Mesophilic Starter Cultures. Applied and Environmental Microbiology. PMID 28754704 DOI: 10.1128/AEM.00888-17  0.136
2012 Owusu-Kwarteng J, Akabanda F, Nielsen DS, Tano-Debrah K, Glover RL, Jespersen L. Identification of lactic acid bacteria isolated during traditional fura processing in Ghana. Food Microbiology. 32: 72-8. PMID 22850376 DOI: 10.1016/j.fm.2012.04.010  0.135
2023 Mønsted MØ, Bilgin M, Kuzma M, Pelantová H, Pedersen K, Tomášová P, Nazmutdinova A, Šedivá B, Funda D, Castro-Mejía JL, Holm LJ, Nielsen DS, Haupt-Jorgensen M. Reduced phosphatidylcholine level in the intestinal mucus layer of prediabetic NOD mice. Apmis : Acta Pathologica, Microbiologica, Et Immunologica Scandinavica. PMID 36811202 DOI: 10.1111/apm.13302  0.135
2005 Nielsen DS, Hønholt S, Tano-Debrah K, Jespersen L. Yeast populations associated with Ghanaian cocoa fermentations analysed using denaturing gradient gel electrophoresis (DGGE). Yeast (Chichester, England). 22: 271-84. PMID 15704234 DOI: 10.1002/yea.1207  0.134
2013 Rune I, Hansen CH, Ellekilde M, Nielsen DS, Skovgaard K, Rolin BC, Lykkesfeldt J, Josefsen K, Tranberg B, Kihl P, Hansen AK. Ampicillin-improved glucose tolerance in diet-induced obese C57BL/6NTac mice is age dependent. Journal of Diabetes Research. 2013: 319321. PMID 24369539 DOI: 10.1155/2013/319321  0.134
2023 Gaggìa F, Jakobsen RR, Alberoni D, Baffoni L, Cutajar S, Mifsud D, Nielsen DS, Di Gioia D. Environment or genetic isolation? An atypical intestinal microbiota in the Maltese honey bee spp. . Frontiers in Microbiology. 14: 1127717. PMID 36910174 DOI: 10.3389/fmicb.2023.1127717  0.134
2008 Nielsen DS, Snitkjaer P, van den Berg F. Investigating the fermentation of cocoa by correlating denaturing gradient gel electrophoresis profiles and near infrared spectra. International Journal of Food Microbiology. 125: 133-40. PMID 18499292 DOI: 10.1016/j.ijfoodmicro.2008.03.040  0.133
2019 Lindenberg F, Krych L, Fielden J, Kot W, Frøkiær H, van Galen G, Nielsen DS, Hansen AK. Expression of immune regulatory genes correlate with the abundance of specific Clostridiales and Verrucomicrobia species in the equine ileum and cecum. Scientific Reports. 9: 12674. PMID 31481726 DOI: 10.1038/s41598-019-49081-5  0.133
2020 Hauptmann AL, Paulová P, Castro-Mejía JL, Hansen LH, Sicheritz-Pontén T, Mulvad G, Nielsen DS. The microbial composition of dried fish prepared according to Greenlandic Inuit traditions and industrial counterparts. Food Microbiology. 85: 103305. PMID 31500717 DOI: 10.1016/j.fm.2019.103305  0.133
2008 Abdelgadir W, Nielsen DS, Hamad S, Jakobsen M. A traditional Sudanese fermented camel's milk product, Gariss, as a habitat of Streptococcus infantarius subsp. infantarius. International Journal of Food Microbiology. 127: 215-9. PMID 18774196 DOI: 10.1016/j.ijfoodmicro.2008.07.008  0.133
2013 Compaoré CS, Nielsen DS, Ouoba LI, Berner TS, Nielsen KF, Sawadogo-Lingani H, Diawara B, Ouédraogo GA, Jakobsen M, Thorsen L. Co-production of surfactin and a novel bacteriocin by Bacillus subtilis subsp. subtilis H4 isolated from Bikalga, an African alkaline Hibiscus sabdariffa seed fermented condiment. International Journal of Food Microbiology. 162: 297-307. PMID 23466466 DOI: 10.1016/j.ijfoodmicro.2013.01.013  0.133
2021 Williams AR, Myhill LJ, Stolzenbach S, Nejsum P, Mejer H, Nielsen DS, Thamsborg SM. Emerging interactions between diet, gastrointestinal helminth infection, and the gut microbiota in livestock. Bmc Veterinary Research. 17: 62. PMID 33514383 DOI: 10.1186/s12917-021-02752-w  0.133
2020 Rasmussen TS, Koefoed AK, Jakobsen RR, Deng L, Castro-Mejía JL, Brunse A, Neve H, Vogensen FK, Nielsen DS. Bacteriophage-mediated manipulation of the gut microbiome - promises and presents limitations. Fems Microbiology Reviews. PMID 32495834 DOI: 10.1093/femsre/fuaa020  0.132
2013 Akabanda F, Owusu-Kwarteng J, Tano-Debrah K, Glover RL, Nielsen DS, Jespersen L. Taxonomic and molecular characterization of lactic acid bacteria and yeasts in nunu, a Ghanaian fermented milk product. Food Microbiology. 34: 277-83. PMID 23541194 DOI: 10.1016/j.fm.2012.09.025  0.132
2019 Deng L, Silins R, Castro-Mejía JL, Kot W, Jessen L, Thorsen J, Shah S, Stokholm J, Bisgaard H, Moineau S, Nielsen DS. A Protocol for Extraction of Infective Viromes Suitable for Metagenomics Sequencing from Low Volume Fecal Samples. Viruses. 11. PMID 31330855 DOI: 10.3390/V11070667  0.132
2017 Williams AR, Krych L, Fauzan Ahmad H, Nejsum P, Skovgaard K, Nielsen DS, Thamsborg SM. A polyphenol-enriched diet and Ascaris suum infection modulate mucosal immune responses and gut microbiota composition in pigs. Plos One. 12: e0186546. PMID 29028844 DOI: 10.1371/journal.pone.0186546  0.132
2016 Oguntoyinbo FA, Cho GS, Trierweiler B, Kabisch J, Rösch N, Neve H, Bockelmann W, Frommherz L, Nielsen DS, Krych L, Franz CM. Fermentation of African kale (Brassica carinata) using L. plantarum BFE 5092 and L. fermentum BFE 6620 starter strains. International Journal of Food Microbiology. 238: 103-112. PMID 27614122 DOI: 10.1016/j.ijfoodmicro.2016.08.030  0.131
2014 Hansen CH, Krych L, Buschard K, Metzdorff SB, Nellemann C, Hansen LH, Nielsen DS, Frøkiær H, Skov S, Hansen AK. A maternal gluten-free diet reduces inflammation and diabetes incidence in the offspring of NOD mice. Diabetes. 63: 2821-32. PMID 24696449 DOI: 10.2337/db13-1612  0.131
2020 Myhill LJ, Stolzenbach S, Mejer H, Jakobsen SR, Hansen TVA, Andersen D, Brix S, Hansen LH, Krych L, Nielsen DS, Nejsum P, Thamsborg SM, Williams AR. Fermentable Dietary Fiber Promotes Helminth Infection and Exacerbates Host Inflammatory Responses. Journal of Immunology (Baltimore, Md. : 1950). PMID 32284331 DOI: 10.4049/jimmunol.1901149  0.131
2021 Stage M, Hui Y, Nielsen DS, Vera-Jiménez NI, Olsen J, Sandelin A, Wichmann A. Genomic stability and phenotypic characteristics of industrially-produced GG in a yogurt matrix. Applied and Environmental Microbiology. AEM0157521. PMID 34613788 DOI: 10.1128/AEM.01575-21  0.13
2022 Lützhøft DO, Sinioja T, Christoffersen BØ, Jakobsen RR, Geng D, Ahmad HFB, Straarup EM, Pedersen KM, Kot W, Pedersen HD, Cirera S, Hyötyläinen T, Nielsen DS, Hansen AK. Marked gut microbiota dysbiosis and increased imidazole propionate are associated with a NASH Göttingen Minipig model. Bmc Microbiology. 22: 287. PMID 36456963 DOI: 10.1186/s12866-022-02704-w  0.129
2022 Bondarenko V, Løkke CR, Dobrowolski P, Mentzel CJ, Castro-Mejía JL, Hansen CHF, Sørensen DB, Nielsen DS, Krych L, Hansen AK. Controlling the uncontrolled variation in the diet induced obese mouse by microbiomic characterization. Scientific Reports. 12: 13767. PMID 35962158 DOI: 10.1038/s41598-022-17242-8  0.129
2019 Lützhøft DO, Sánchez-Alcoholado L, Tougaard P, Junker Mentzel CM, Kot W, Nielsen DS, Hansen AK. Short communication: Gut microbial colonization of the mouse colon using faecal transfer was equally effective when comparing rectal inoculation and oral inoculation based on 16S rRNA sequencing. Research in Veterinary Science. 126: 227-232. PMID 31627163 DOI: 10.1016/j.rvsc.2019.09.009  0.129
2022 Hansen CHF, Larsen CS, Zachariassen LF, Mentzel CMJ, Laigaard A, Krych L, Nielsen DS, Gobbi A, Haupt-Jorgensen M, Buschard K, Hansen AK. Gluten-free diet reduces autoimmune diabetes mellitus in mice across multiple generations in a microbiota-independent manner. Journal of Autoimmunity. 127: 102795. PMID 35101708 DOI: 10.1016/j.jaut.2022.102795  0.129
2009 Parkouda C, Nielsen DS, Azokpota P, Ouoba LI, Amoa-Awua WK, Thorsen L, Hounhouigan JD, Jensen JS, Tano-Debrah K, Diawara B, Jakobsen M. The microbiology of alkaline-fermentation of indigenous seeds used as food condiments in Africa and Asia. Critical Reviews in Microbiology. 35: 139-56. PMID 19514912 DOI: 10.1080/10408410902793056  0.128
2019 Marcial-Coba MS, Knøchel S, Nielsen DS. Low-moisture food matrices as probiotic carriers. Fems Microbiology Letters. PMID 30629190 DOI: 10.1093/femsle/fnz006  0.128
2017 Vuholm S, Nielsen DS, Iversen KN, Suhr J, Westermann P, Krych L, Andersen JR, Kristensen M. Whole-Grain Rye and Wheat Affect Some Markers of Gut Health without Altering the Fecal Microbiota in Healthy Overweight Adults: A 6-Week Randomized Trial. The Journal of Nutrition. PMID 28954842 DOI: 10.3945/jn.117.250647  0.127
2016 Rune I, Rolin B, Larsen C, Nielsen DS, Kanter JE, Bornfeldt KE, Lykkesfeldt J, Buschard K, Kirk RK, Christoffersen B, Fels JJ, Josefsen K, Kihl P, Hansen AK. Modulating the Gut Microbiota Improves Glucose Tolerance, Lipoprotein Profile and Atherosclerotic Plaque Development in ApoE-Deficient Mice. Plos One. 11: e0146439. PMID 26799618 DOI: 10.1371/Journal.Pone.0146439  0.126
2018 Gaggìa F, Baffoni L, Galiano M, Nielsen DS, Jakobsen RR, Castro-Mejía JL, Bosi S, Truzzi F, Musumeci F, Dinelli G, Di Gioia D. Kombucha Beverage from Green, Black and Rooibos Teas: A Comparative Study Looking at Microbiology, Chemistry and Antioxidant Activity. Nutrients. 11. PMID 30577416 DOI: 10.3390/nu11010001  0.126
2018 Fuglsang E, Pizzolla A, Krych L, Nielsen DS, Brooks AG, Frøkiær H, Reading PC. Changes in Gut Microbiota Prior to Influenza A Virus Infection Do Not Affect Immune Responses in Pups or Juvenile Mice. Frontiers in Cellular and Infection Microbiology. 8: 319. PMID 30258820 DOI: 10.3389/fcimb.2018.00319  0.126
2019 Hansen AK, Nielsen DS, Krych L, Hansen CHF. Bacterial species to be considered in quality assurance of mice and rats. Laboratory Animals. 53: 281-291. PMID 31096877 DOI: 10.1177/0023677219834324  0.126
2022 Andersen-Civil AIS, Myhill LJ, Büdeyri Gökgöz N, Engström MT, Mejer H, Zhu L, Zeller WE, Salminen JP, Krych L, Lauridsen C, Nielsen DS, Thamsborg SM, Williams AR. Dietary proanthocyanidins promote localized antioxidant responses in porcine pulmonary and gastrointestinal tissues during Ascaris suum-induced type 2 inflammation. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 36: e22256. PMID 35333423 DOI: 10.1096/fj.202101603RR  0.125
2020 Castro-Mejía JL, Khakimov B, Krych Ł, Bülow J, Bechshøft RL, Højfeldt G, Mertz KH, Garne ES, Schacht SR, Ahmad HF, Kot W, Hansen LH, Perez-Cueto FJA, Lind MV, Lassen AJ, ... ... Nielsen DS, et al. Physical fitness in community-dwelling older adults is linked to dietary intake, gut microbiota, and metabolomic signatures. Aging Cell. e13105. PMID 31967716 DOI: 10.1111/acel.13105  0.125
2015 Hansen AK, Krych Ł, Nielsen DS, Hansen CH. A Review of Applied Aspects of Dealing with Gut Microbiota Impact on Rodent Models. Ilar Journal / National Research Council, Institute of Laboratory Animal Resources. 56: 250-64. PMID 26323634 DOI: 10.1093/ilar/ilv010  0.125
2010 Parkouda C, Thorsen L, Compaoré CS, Nielsen DS, Tano-Debrah K, Jensen JS, Diawara B, Jakobsen M. Microorganisms associated with Maari, a Baobab seed fermented product. International Journal of Food Microbiology. 142: 292-301. PMID 20688411 DOI: 10.1016/j.ijfoodmicro.2010.07.004  0.125
2018 Marcial-Coba MS, Cieplak T, Cahú TB, Blennow A, Knøchel S, Nielsen DS. Viability of microencapsulated Akkermansia muciniphila and Lactobacillus plantarum during freeze-drying, storage and in vitro simulated upper gastrointestinal tract passage. Food & Function. PMID 30362482 DOI: 10.1039/c8fo01331d  0.124
2021 Rasmussen TS, Jakobsen RR, Castro-Mejía JL, Kot W, Thomsen AR, Vogensen FK, Nielsen DS, Hansen AK. Inter-vendor variance of enteric eukaryotic DNA viruses in specific pathogen free C57BL/6N mice. Research in Veterinary Science. 136: 1-5. PMID 33548686 DOI: 10.1016/j.rvsc.2021.01.022  0.124
2008 Nielsen DS, Jacobsen T, Jespersen L, Koch AG, Arneborg N. Occurrence and growth of yeasts in processed meat products - Implications for potential spoilage. Meat Science. 80: 919-26. PMID 22063618 DOI: 10.1016/j.meatsci.2008.04.011  0.124
2018 Fuglsang E, Krych L, Lundsager MT, Nielsen DS, Frøkiaer H. Postnatal Administration of Lactobacillus rhamnosus HN001 Ameliorates Perinatal Broad-Spectrum Antibiotic-Induced Reduction in Myelopoiesis and T cell Activation in Mouse Pups. Molecular Nutrition & Food Research. e1800510. PMID 30211987 DOI: 10.1002/mnfr.201800510  0.124
2019 Zachariassen LF, Hansen AK, Krych L, Nielsen DS, Holm TL, Tougaard P, Hansen CHF. Cesarean section increases sensitivity to oxazolone-induced colitis in C57BL/6 mice. Mucosal Immunology. PMID 31554900 DOI: 10.1038/s41385-019-0207-8  0.124
2020 De Pietri S, Ingham AC, Frandsen TL, Rathe M, Krych L, Castro-Mejía JL, Nielsen DS, Nersting J, Wehner PS, Schmiegelow K, Hasle H, Pamp SJ, Müller K. Gastrointestinal toxicity during induction treatment for childhood acute lymphoblastic leukemia: The impact of the gut microbiota. International Journal of Cancer. PMID 32115690 DOI: 10.1002/ijc.32942  0.124
2022 Sprotte S, Rasmussen TS, Cho GS, Brinks E, Lametsch R, Neve H, Vogensen FK, Nielsen DS, Franz CMAP. Morphological and Genetic Characterization of Bacteriophage PMBT5. Viruses. 14. PMID 35893664 DOI: 10.3390/v14081598  0.123
2018 Houngbédji M, Johansen P, Padonou SW, Akissoé N, Arneborg N, Nielsen DS, Hounhouigan DJ, Jespersen L. Occurrence of lactic acid bacteria and yeasts at species and strain level during spontaneous fermentation of mawè, a cereal dough produced in West Africa. Food Microbiology. 76: 267-278. PMID 30166150 DOI: 10.1016/j.fm.2018.06.005  0.123
2020 Moreno-Indias I, Lundberg R, Krych L, Metzdorff SB, Kot W, Sørensen DB, Nielsen DS, Hansen CHF, Hansen AK. A Humanized Diet Profile May Facilitate Colonization and Immune Stimulation in Human Microbiota-Colonized Mice. Frontiers in Microbiology. 11: 1336. PMID 32636823 DOI: 10.3389/fmicb.2020.01336  0.123
2016 Castro-Mejía J, Jakesevic M, Krych Ł, Nielsen DS, Hansen LH, Sondergaard BC, Kvist PH, Hansen AK, Holm TL. Treatment with a Monoclonal Anti-IL-12p40 Antibody Induces Substantial Gut Microbiota Changes in an Experimental Colitis Model. Gastroenterology Research and Practice. 2016: 4953120. PMID 26880890 DOI: 10.1155/2016/4953120  0.123
2014 Wallrodt I, Jelsbak L, Thomsen LE, Brix L, Lemire S, Gautier L, Nielsen DS, Jovanovic G, Buck M, Olsen JE. Removal of the phage-shock protein PspB causes reduction of virulence in Salmonella enterica serovar Typhimurium independently of NRAMP1. Journal of Medical Microbiology. 63: 788-95. PMID 24713356 DOI: 10.1099/jmm.0.072223-0  0.122
2011 Thorsen L, Abdelgadir WS, Rønsbo MH, Abban S, Hamad SH, Nielsen DS, Jakobsen M. Identification and safety evaluation of Bacillus species occurring in high numbers during spontaneous fermentations to produce Gergoush, a traditional Sudanese bread snack. International Journal of Food Microbiology. 146: 244-52. PMID 21429611 DOI: 10.1016/j.ijfoodmicro.2011.02.028  0.121
2016 Papalexandratou Z, Nielsen DS. It's Gettin' Hot in Here: Breeding Robust Yeast Starter Cultures for Cocoa Fermentation. Trends in Microbiology. 24: 168-170. PMID 26803379 DOI: 10.1016/j.tim.2016.01.003  0.121
2012 Bangsgaard Bendtsen KM, Krych L, Sørensen DB, Pang W, Nielsen DS, Josefsen K, Hansen LH, Sørensen SJ, Hansen AK. Gut microbiota composition is correlated to grid floor induced stress and behavior in the BALB/c mouse. Plos One. 7: e46231. PMID 23056268 DOI: 10.1371/journal.pone.0046231  0.121
2019 Li Z, Rasmussen TS, Rasmussen ML, Li J, Henríquez Olguín C, Kot W, Nielsen DS, Jensen TE. The Gut Microbiome on a Periodized Low-Protein Diet Is Associated With Improved Metabolic Health. Frontiers in Microbiology. 10: 709. PMID 31019501 DOI: 10.3389/fmicb.2019.00709  0.12
2010 Gaggìa F, Nielsen DS, Biavati B, Siegumfeldt H. Intracellular pH of Mycobacterium avium subsp. paratuberculosis following exposure to antimicrobial compounds monitored at the single cell level. International Journal of Food Microbiology. S188-92. PMID 20573414 DOI: 10.1016/j.ijfoodmicro.2010.05.031  0.12
2023 Canoy TS, Wiedenbein ES, Bredie WLP, Meyer AS, Wösten HAB, Nielsen DS. Solid-State Fermented Plant Foods as New Protein Sources. Annual Review of Food Science and Technology. PMID 38109492 DOI: 10.1146/annurev-food-060721-013526  0.12
2020 Rasmussen TS, Nielsen DS. [Bakteriofager - de hjælpsomme vira]. Ugeskrift For Laeger. 182. PMID 33000742  0.12
2023 Rasmussen TS, Koefoed AK, Deng L, Muhammed MK, Rousseau GM, Kot W, Sprotte S, Neve H, Franz CMAP, Hansen AK, Vogensen FK, Moineau S, Nielsen DS. CRISPR-Cas provides limited phage immunity to a prevalent gut bacterium in gnotobiotic mice. The Isme Journal. PMID 36631688 DOI: 10.1038/s41396-023-01358-4  0.119
2005 Jespersen L, Nielsen DS, Hønholt S, Jakobsen M. Occurrence and diversity of yeasts involved in fermentation of West African cocoa beans. Fems Yeast Research. 5: 441-53. PMID 15691749 DOI: 10.1016/J.FEMSYR.2004.11.002  0.119
2022 Castro-Mejía JL, Khakimov B, Aru V, Lind MV, Garne E, Paulová P, Tavakkoli E, Hansen LH, Smilde AK, Holm L, Engelsen SB, Nielsen DS. Gut Microbiome and Its Cofactors Are Linked to Lipoprotein Distribution Profiles. Microorganisms. 10. PMID 36363749 DOI: 10.3390/microorganisms10112156  0.119
2022 Zhu L, Andersen-Civil AIS, Castro-Meija JL, Nielsen DS, Blanchard A, Olsen JE, Thamsborg SM, Williams AR. Garlic-Derived Metabolites Exert Antioxidant Activity, Modulate Gut Microbiota Composition and Limit Infection in Mice. Antioxidants (Basel, Switzerland). 11. PMID 36290756 DOI: 10.3390/antiox11102033  0.119
2023 Zhai X, Castro-Mejía JL, Gobbi A, Aslampaloglou A, Kot W, Nielsen DS, Deng L. The impact of storage buffer and storage conditions on fecal samples for bacteriophage infectivity and metavirome analyses. Microbiome. 11: 193. PMID 37635262 DOI: 10.1186/s40168-023-01632-9  0.118
2021 Rasmussen TS, Streidl T, Hitch TCA, Wortmann E, Deptula P, Kofoed MVW, Riedel T, Neumann-Schaal M, Hansen M, Nielsen DS, Clavel T, Vogensen FK. gen. nov., sp. nov., a novel bacterium isolated from the caecum of an obese mouse. International Journal of Systematic and Evolutionary Microbiology. PMID 33512312 DOI: 10.1099/ijsem.0.004673  0.118
2023 Valente AH, Jensen KMR, Myhill LJ, Zhu L, Mentzel CMJ, Krych L, Simonsen HT, Castro-Mejía JL, Gobbi A, Bach Knudsen KE, Nielsen DS, Thamsborg SM, Williams AR. Dietary non-starch polysaccharides impair immunity to enteric nematode infection. Bmc Biology. 21: 138. PMID 37316905 DOI: 10.1186/s12915-023-01640-z  0.118
2022 Wei SS, Yen CM, Marshall IPG, Hamid HA, Kamal SS, Nielsen DS, Ahmad HF. Gut microbiome and metabolome of sea cucumber (Stichopus ocellatus) as putative markers for monitoring the marine sediment pollution in Pahang, Malaysia. Marine Pollution Bulletin. 182: 114022. PMID 35963228 DOI: 10.1016/j.marpolbul.2022.114022  0.117
2018 Matzen RD, Zinck Leth-Espensen J, Jansson T, Nielsen DS, Lund MN, Matzen S. The Antibacterial Effect of Honey Derived from Various Danish Flora. Dermatology Research and Practice. 2018: 7021713. PMID 30018636 DOI: 10.1155/2018/7021713  0.117
2020 Mathieu A, Dion M, Deng L, Tremblay D, Moncaut E, Shah SA, Stokholm J, Krogfelt KA, Schjørring S, Bisgaard H, Nielsen DS, Moineau S, Petit MA. Virulent coliphages in 1-year-old children fecal samples are fewer, but more infectious than temperate coliphages. Nature Communications. 11: 378. PMID 31953385 DOI: 10.1038/S41467-019-14042-Z  0.117
2018 Marcial-Coba MS, Saaby L, Knøchel S, Nielsen DS. Dark chocolate as a stable carrier of microencapsulated Akkermansia muciniphila and Lactobacillus casei. Fems Microbiology Letters. PMID 30576460 DOI: 10.1093/femsle/fny290  0.116
2021 Hui Y, Tamez-Hidalgo P, Cieplak T, Satessa GD, Kot W, Kjærulff S, Nielsen MO, Nielsen DS, Krych L. Supplementation of a lacto-fermented rapeseed-seaweed blend promotes gut microbial- and gut immune-modulation in weaner piglets. Journal of Animal Science and Biotechnology. 12: 85. PMID 34281627 DOI: 10.1186/s40104-021-00601-2  0.115
2018 Thøgersen R, Castro-Mejía JL, Sundekilde UK, Hansen LH, Hansen AK, Nielsen DS, Bertram HC. Ingestion of an Inulin-Enriched Pork Sausage Product Positively Modulates the Gut Microbiome and Metabolome of Healthy Rats. Molecular Nutrition & Food Research. e1800608. PMID 30004630 DOI: 10.1002/mnfr.201800608  0.115
2016 Damlund DS, Metzdorff SB, Hasselby JP, Wiese M, Lundsager M, Nielsen DS, Buschard KS, Hansen AK, Frøkiær H. Postnatal Hematopoiesis and Gut Microbiota in NOD Mice Deviate from C57BL/6 Mice. Journal of Diabetes Research. 2016: 6321980. PMID 26783537 DOI: 10.1155/2016/6321980  0.114
2013 Krych L, Hansen CH, Hansen AK, van den Berg FW, Nielsen DS. Quantitatively different, yet qualitatively alike: a meta-analysis of the mouse core gut microbiome with a view towards the human gut microbiome. Plos One. 8: e62578. PMID 23658749 DOI: 10.1371/journal.pone.0062578  0.114
2013 Compaoré CS, Nielsen DS, Sawadogo-Lingani H, Berner TS, Nielsen KF, Adimpong DB, Diawara B, Ouédraogo GA, Jakobsen M, Thorsen L. Bacillus amyloliquefaciens ssp. plantarum strains as potential protective starter cultures for the production of Bikalga, an alkaline fermented food. Journal of Applied Microbiology. 115: 133-46. PMID 23565829 DOI: 10.1111/jam.12214  0.114
2018 Kobaek-Larsen M, Nielsen DS, Kot W, Krych Ł, Christensen LP, Baatrup G. Effect of the dietary polyacetylenes falcarinol and falcarindiol on the gut microbiota composition in a rat model of colorectal cancer. Bmc Research Notes. 11: 411. PMID 29945666 DOI: 10.1186/s13104-018-3527-y  0.113
2019 Anjum M, Madsen JS, Nesme J, Jana B, Wiese M, Jasinskytė D, Nielsen DS, Sørensen SJ, Dalsgaard A, Moodley A, Bortolaia V, Guardabassi L. Fate of CMY-2-encoding plasmids introduced into the human fecal microbiota by exogenous . Antimicrobial Agents and Chemotherapy. PMID 30885897 DOI: 10.1128/AAC.02528-18  0.113
2007 Sawadogo-Lingani H, Lei V, Diawara B, Nielsen DS, Møller PL, Traoré AS, Jakobsen M. The biodiversity of predominant lactic acid bacteria in dolo and pito wort for the production of sorghum beer. Journal of Applied Microbiology. 103: 765-77. PMID 17897178 DOI: 10.1111/j.1365-2672.2007.03306.x  0.113
2015 Pyndt Jørgensen B, Winther G, Kihl P, Nielsen DS, Wegener G, Hansen AK, Sørensen DB. Dietary magnesium deficiency affects gut microbiota and anxiety-like behaviour in C57BL/6N mice. Acta Neuropsychiatrica. 1-5. PMID 25773775 DOI: 10.1017/neu.2015.10  0.112
2023 Lin S, Xu X, Holck J, Wittrup Agger J, Wilkens C, Xie Z, Khakimov B, Nielsen DS, Meyer AS. Soluble, Diferuloylated Corn Bran Glucuronoarabinoxylans Modulate the Human Gut Microbiota . Journal of Agricultural and Food Chemistry. PMID 36787634 DOI: 10.1021/acs.jafc.2c08338  0.111
2018 Castro-Mejía JL, Deng L, Vogensen FK, Reyes A, Nielsen DS. Extraction and Purification of Viruses from Fecal Samples for Metagenome and Morphology Analyses. Methods in Molecular Biology (Clifton, N.J.). 1838: 49-57. PMID 30128989 DOI: 10.1007/978-1-4939-8682-8_5  0.111
2013 Agbobatinkpo PB, Thorsen L, Nielsen DS, Azokpota P, Akissoe N, Hounhouigan JD, Jakobsen M. Biodiversity of aerobic endospore-forming bacterial species occurring in Yanyanku and Ikpiru, fermented seeds of Hibiscus sabdariffa used to produce food condiments in Benin. International Journal of Food Microbiology. 163: 231-8. PMID 23571124 DOI: 10.1016/j.ijfoodmicro.2013.02.008  0.11
2023 Zachariassen LF, Ebert MBB, Mentzel CMJ, Deng L, Krych L, Nielsen DS, Stokholm J, Hansen CHF. Cesarean section induced dysbiosis promotes type 2 immunity but not oxazolone-induced dermatitis in mice. Gut Microbes. 15: 2271151. PMID 37889696 DOI: 10.1080/19490976.2023.2271151  0.11
2015 Krych ?, Nielsen DS, Hansen AK, Hansen CH. Gut microbial markers are associated with diabetes onset, regulatory imbalance, and IFN-γ level in NOD mice. Gut Microbes. 6: 101-9. PMID 25648687 DOI: 10.1080/19490976.2015.1011876  0.11
2012 Pang W, Vogensen FK, Nielsen DS, Hansen AK. Faecal and caecal microbiota profiles of mice do not cluster in the same way. Laboratory Animals. 46: 231-6. PMID 22723645 DOI: 10.1258/la.2012.011128  0.109
2015 Vestergaard B, Krych Ł, Lund LR, Jørgensen BP, Hansen L, Jensen HE, Nielsen DS, Hansen AK. Colonic Lesions, Cytokine Profiles, and Gut Microbiota in Plasminogen-Deficient Mice. Comparative Medicine. 65: 382-97. PMID 26473342  0.109
2018 Rune I, Rolin B, Lykkesfeldt J, Nielsen DS, Krych Ł, Kanter JE, Bornfeldt KE, Kihl P, Buschard K, Josefsen K, Fels JJ, Mortensen A, Christoffersen B, Kirk RK, Hansen AK. Long-term Western diet fed apolipoprotein E-deficient rats exhibit only modest early atherosclerotic characteristics. Scientific Reports. 8: 5416. PMID 29615808 DOI: 10.1038/s41598-018-23835-z  0.108
2020 Hauptmann AL, Paulová P, Hansen LH, Sicheritz-Pontén T, Mulvad G, Nielsen DS. Microbiota in foods from Inuit traditional hunting. Plos One. 15: e0227819. PMID 31935269 DOI: 10.1371/journal.pone.0227819  0.108
2018 Muhammed MK, Olsen ML, Kot W, Neve H, Castro-Mejía JL, Janzen T, Hansen LH, Nielsen DS, Sørensen SJ, Heller KJ, Vogensen FK. Investigation of the bacteriophage community in induced lysates of undefined mesophilic mixed-strain DL-cultures using classical and metagenomic approaches. International Journal of Food Microbiology. 272: 61-72. PMID 29529425 DOI: 10.1016/j.ijfoodmicro.2018.02.012  0.108
2010 Smigic N, Rajkovic A, Nielsen DS, Arneborg N, Siegumfeldt H, Devlieghere F. Survival of lactic acid and chlorine dioxide treated Campylobacter jejuni under suboptimal conditions of pH, temperature and modified atmosphere. International Journal of Food Microbiology. S140-6. PMID 20149937 DOI: 10.1016/j.ijfoodmicro.2010.01.026  0.107
2010 Aculey PC, Snitkjaer P, Owusu M, Bassompiere M, Takrama J, Nørgaard L, Petersen MA, Nielsen DS. Ghanaian cocoa bean fermentation characterized by spectroscopic and chromatographic methods and chemometrics Journal of Food Science. 75. PMID 20722952 DOI: 10.1111/j.1750-3841.2010.01710.x  0.107
2010 Smigic N, Rajkovic A, Arneborg N, Siegumfeldt H, Devlieghere F, Nielsen DS. Intracellular pH in Campylobacter jejuni when treated with aqueous chlorine dioxide. Foodborne Pathogens and Disease. 8: 325-8. PMID 21034266 DOI: 10.1089/fpd.2010.0604  0.107
2022 Kihl P, Krych L, Deng L, Hansen LH, Buschard K, Skov S, Nielsen DS, Kornerup Hansen A. Effect of gluten-free diet and antibiotics on murine gut microbiota and immune response to tetanus vaccination. Plos One. 17: e0266719. PMID 35417506 DOI: 10.1371/journal.pone.0266719  0.106
2015 Bjerg AT, Sørensen MB, Krych L, Hansen LH, Astrup A, Kristensen M, Nielsen DS. The effect of Lactobacillus paracasei subsp. paracasei L. casei W8® on blood levels of triacylglycerol is independent of colonisation. Beneficial Microbes. 6: 263-9. PMID 25273547 DOI: 10.3920/BM2014.0033  0.106
2009 Kastbjerg VG, Nielsen DS, Arneborg N, Gram L. Response of Listeria monocytogenes to Disinfection Stress at the Single-Cell and Population Levels as Monitored by Intracellular pH measurements and viable-cell counts. Applied and Environmental Microbiology. 75: 4550-6. PMID 19411424 DOI: 10.1128/AEM.02625-08  0.106
2021 Agergaard J, Zillmer MCF, Castro-Mejía JL, Mertz K, Kot W, Højfeldt G, van Hall G, Nielsen DS, Schjerling P, Holm L. Impaired skeletal muscle hypertrophy signaling and amino acid deprivation response in Apoe knockout mice with an unhealthy lipoprotein distribution. Scientific Reports. 11: 16423. PMID 34385572 DOI: 10.1038/s41598-021-96000-8  0.105
2015 Ouoba LI, Vouidibio A, Thorsen L, Anyogu A, Nielsen DS, Kobawila SC, Sutherland JP. Lysinibacillus louembei sp. nov., a novel spore-forming bacterium isolated from Ntoba Mbodi, alkaline fermented leaves of cassava from The Republic of Congo. International Journal of Systematic and Evolutionary Microbiology. PMID 26333923 DOI: 10.1099/ijsem.0.000570  0.105
2010 Nielsen DS, Cho GS, Hanak A, Huch M, Franz CM, Arneborg N. The effect of bacteriocin-producing Lactobacillus plantarum strains on the intracellular pH of sessile and planktonic Listeria monocytogenes single cells. International Journal of Food Microbiology. 141: S53-9. PMID 20447709 DOI: 10.1016/j.ijfoodmicro.2010.03.040  0.104
2016 Rune I, Rolin B, Larsen C, Nielsen DS, Kanter JE, Bornfeldt KE, Lykkesfeldt J, Buschard K, Kirk RK, Christoffersen B, Fels JJ, Josefsen K, Kihl P, Hansen AK. Modulating the gut microbiota improves glucose tolerance, lipoprotein profile and atherosclerotic plaque development in ApoE-deficient mice Plos One. 11. DOI: 10.1371/journal.pone.0146439  0.104
2010 Padonou SW, Nielsen DS, Akissoe NH, Hounhouigan JD, Nago MC, Jakobsen M. Development of starter culture for improved processing of Lafun, an African fermented cassava food product. Journal of Applied Microbiology. 109: 1402-10. PMID 20553347 DOI: 10.1111/j.1365-2672.2010.04769.x  0.103
2019 Krych Ł, Castro-Mejía JL, Forero-Junco LM, Moesby DN, Mikkelsen MB, Rasmussen MA, Sykulski M, Nielsen DS. DNA enrichment and tagmentation method for species-level identification and strain-level differentiation using ON-rep-seq. Communications Biology. 2: 369. PMID 31925212 DOI: 10.1038/s42003-019-0617-x  0.102
2019 Krych Ł, Castro-Mejía JL, Forero-Junco LM, Moesby DN, Mikkelsen MB, Rasmussen MA, Sykulski M, Nielsen DS. DNA enrichment and tagmentation method for species-level identification and strain-level differentiation using ON-rep-seq. Communications Biology. 2: 369. PMID 31633060 DOI: 10.1038/s42003-019-0617-x  0.102
2014 Pyndt Jørgensen B, Hansen JT, Krych L, Larsen C, Klein AB, Nielsen DS, Josefsen K, Hansen AK, Sørensen DB. A possible link between food and mood: dietary impact on gut microbiota and behavior in BALB/c mice. Plos One. 9: e103398. PMID 25133574 DOI: 10.1371/Journal.Pone.0103398  0.102
2019 Hansen EB, Nielsen DS, LaPointe G. Editorial: Microbial food and feed ingredients - reconciling tradition and novelty. Fems Microbiology Letters. 366: i1-i2. PMID 31807755 DOI: 10.1093/femsle/fnz130s  0.102
2019 Hansen EB, Nielsen DS, LaPointe G. Editorial: Microbial food and feed ingredients - reconciling tradition and novelty. Fems Microbiology Letters. 366. PMID 31271430 DOI: 10.1093/Femsle/Fnz130  0.102
2018 Anjum M, Madsen JS, Espinosa-Gongora C, Jana B, Wiese M, Nielsen DS, Sørensen SJ, Moodley A, Bortolaia V, Guardabassi L. A culture-independent method for studying transfer of IncI1 plasmids from wild-type Escherichia coli in complex microbial communities. Journal of Microbiological Methods. PMID 30030013 DOI: 10.1016/j.mimet.2018.07.009  0.102
2023 Larsen F, Jakobsen RR, Mao X, Castro-Mejia J, Deng L, Nielsen DS. Purification and Up-Concentration of Bacteriophages and Viruses from Fecal Samples. Methods in Molecular Biology (Clifton, N.J.). 2738: 105-110. PMID 37966594 DOI: 10.1007/978-1-0716-3549-0_6  0.102
2017 Marcial-Coba MS, Marshall IPG, Schreiber L, Nielsen DS. High-Quality Draft Genome Sequence of Lactobacillus casei Strain Z11, Isolated from a Human Adult Intestinal Biopsy Sample. Genome Announcements. 5. PMID 28705981 DOI: 10.1128/Genomea.00634-17  0.101
2019 Kihl P, Krych L, Deng L, Kildemoes AO, Laigaard A, Hansen LH, Hansen CHF, Buschard K, Nielsen DS, Hansen AK. Oral LPS Dosing Induces Local Immunological Changes in the Pancreatic Lymph Nodes in Mice. Journal of Diabetes Research. 2019: 1649279. PMID 30956991 DOI: 10.1155/2019/1649279  0.1
2012 Lundberg R, Clausen SK, Pang W, Nielsen DS, Möller K, Josefsen KE, Hansen AK. Gastrointestinal microbiota and local inflammation during oxazolone-induced dermatitis in BALB/cA mice. Comparative Medicine. 62: 371-80. PMID 23114040  0.1
2020 Stage M, Gustafsson AW, Jørgensen M, Vera-Jimenéz NI, Wielje M, Nielsen DS, Sandelin A, Chen Y, Baker A. Genomic and phenotypic stability of GG in an industrial production process. Applied and Environmental Microbiology. PMID 31924618 DOI: 10.1128/AEM.02780-19  0.098
2019 Christensen L, Vuholm S, Roager HM, Nielsen DS, Krych L, Kristensen M, Astrup A, Hjorth MF. Prevotella Abundance Predicts Weight Loss Success in Healthy, Overweight Adults Consuming a Whole-Grain Diet Ad Libitum: A Post Hoc Analysis of a 6-Wk Randomized Controlled Trial. The Journal of Nutrition. PMID 31504699 DOI: 10.1093/jn/nxz198  0.097
2021 Cui M, Trimigno A, Castro-Mejía JL, Reitelseder S, Bülow J, Bechshøft RL, Nielsen DS, Holm L, Engelsen SB, Khakimov B. Human Fecal Metabolome Reflects Differences in Body Mass Index, Physical Fitness, and Blood Lipoproteins in Healthy Older Adults. Metabolites. 11. PMID 34822375 DOI: 10.3390/metabo11110717  0.097
2019 Bayili GR, Johansen P, Nielsen DS, Sawadogo-Lingani H, Ouedraogo GA, Diawara B, Jespersen L. Identification of the predominant microbiota during production of lait caillé, a spontaneously fermented milk product made in Burkina Faso. World Journal of Microbiology & Biotechnology. 35: 100. PMID 31222403 DOI: 10.1007/s11274-019-2672-3  0.096
2021 Zhu L, Andersen-Civil AIS, Myhill LJ, Thamsborg SM, Kot W, Krych L, Nielsen DS, Blanchard A, Williams AR. The phytonutrient cinnamaldehyde limits intestinal inflammation and enteric parasite infection. The Journal of Nutritional Biochemistry. 108887. PMID 34655757 DOI: 10.1016/j.jnutbio.2021.108887  0.095
2017 Kieler IN, Shamzir Kamal S, Vitger AD, Nielsen DS, Lauridsen C, Bjornvad CR. Gut microbiota composition may relate to weight loss rate in obese pet dogs. Veterinary Medicine and Science. 3: 252-262. PMID 29152318 DOI: 10.1002/vms3.80  0.095
2020 Jakobsen RR, Haahr T, Humaidan P, Jensen JS, Kot WP, Castro-Mejia JL, Deng L, Leser TD, Nielsen DS. Characterization of the Vaginal DNA Virome in Health and Dysbiosis. Viruses. 12. PMID 33050261 DOI: 10.3390/v12101143  0.095
2017 Krych Ł, Kot W, Bendtsen KMB, Hansen AK, Vogensen FK, Nielsen DS. Have you tried spermine? A rapid and cost-effective method to eliminate dextran sodium sulfate inhibition of PCR and RT-PCR. Journal of Microbiological Methods. 144: 1-7. PMID 29107603 DOI: 10.1016/j.mimet.2017.10.015  0.094
2023 Wiedenbein ES, Canoy TS, Hui Y, Parkouda C, Compaoré CS, Ametefe E, Jakobsen M, Jespersen L, Nielsen DS. Complete and Draft Genome Sequences of 52 and Strains Isolated from West African Fermentations and 26 Reference Strains from a Public Culture Collection. Microbiology Resource Announcements. e0039423. PMID 37338389 DOI: 10.1128/mra.00394-23  0.094
2023 Leal Rodríguez C, Shah SA, Rasmussen MA, Thorsen J, Boulund U, Pedersen CT, Castro-Mejía JL, Poulsen CE, Poulsen CS, Deng L, Larsen FAN, Widdowson M, Zhang Y, Sørensen SJ, Moineau S, ... ... Nielsen DS, et al. The infant gut virome is associated with preschool asthma risk independently of bacteria. Nature Medicine. PMID 38102298 DOI: 10.1038/s41591-023-02685-x  0.092
2013 Hansen CH, Holm TL, Krych Ł, Andresen L, Nielsen DS, Rune I, Hansen AK, Skov S. Gut microbiota regulates NKG2D ligand expression on intestinal epithelial cells. European Journal of Immunology. 43: 447-57. PMID 23136011 DOI: 10.1002/eji.201242462  0.092
2023 Madsen MTB, Landberg R, Nielsen DS, Zhang Y, Anneberg OMR, Lauritzen L, Damsgaard CT. Effects of Wholegrain Compared to Refined Grain Intake on Cardiometabolic Risk Markers, Gut Microbiota, and Gastrointestinal Symptoms in Children: A Randomized Crossover Trial. The American Journal of Clinical Nutrition. PMID 37898434 DOI: 10.1016/j.ajcnut.2023.10.025  0.092
2021 Wiese M, Hui Y, Holck J, Sejberg JJP, Daures C, Maas E, Kot W, Borné JM, Khakimov B, Thymann T, Nielsen DS. High throughput in vitro characterization of pectins for pig(let) nutrition. Animal Microbiome. 3: 69. PMID 34627409 DOI: 10.1186/s42523-021-00129-w  0.092
2012 Torp TL, Nielsen DT, Stengaard-Pedersen K, Rasmussen F. [Picture of the month: fibromuscular dysplasia]. Ugeskrift For Laeger. 174: 1029. PMID 22487414  0.092
2009 Smigic N, Rajkovic A, Nielsen DS, Siegumfeldt H, Uyttendaele M, Devlieghere F, Arneborg N. Intracellular pH as an indicator of viability and resuscitation of Campylobacter jejuni after decontamination with lactic acid. International Journal of Food Microbiology. 135: 136-43. PMID 19720418 DOI: 10.1016/j.ijfoodmicro.2009.07.023  0.092
2009 Nielsen DS, Jakobsen M, Jespersen L. Candida halmiae sp. nov., Geotrichum ghanense sp. nov. and Candida awuaii sp. nov., isolated from Ghanaian cocoa fermentations. International Journal of Systematic and Evolutionary Microbiology. 60: 1460-1465. PMID 19671722 DOI: 10.1099/ijs.0.016006-0  0.091
2019 Ahmad HF, Schreiber L, Marshall IPG, Andersen PJ, Castro-Mejía JL, Nielsen DS. Draft Genome Sequence of Streptococcus anginosus Strain CALM001, Isolated from the Gut of an Elderly Dane. Microbiology Resource Announcements. 8. PMID 31196919 DOI: 10.1128/MRA.00379-19  0.09
2014 Nielsen DS, Krych Ł, Buschard K, Hansen CH, Hansen AK. Beyond genetics. Influence of dietary factors and gut microbiota on type 1 diabetes. Febs Letters. 588: 4234-43. PMID 24746688 DOI: 10.1016/j.febslet.2014.04.010  0.09
2016 Papalexandratou Z, Nielsen DS. It's Gettin' Hot in Here: Breeding Robust Yeast Starter Cultures for Cocoa Fermentation Trends in Microbiology. 24: 168-170. DOI: 10.1016/j.tim.2016.01.003  0.09
2007 Nielsen DS, Schillinger U, Franz CMAP, Bresciani J, Amoa-Awua W, Holzapfel WH, Jakobsen M. Lactobacillus ghanensis sp. nov., a motile lactic acid bacterium isolated from Ghanaian cocoa fermentations International Journal of Systematic and Evolutionary Microbiology. 57: 1468-1472. PMID 17625177 DOI: 10.1099/ijs.0.64811-0  0.09
2021 Prosberg MV, Kringel H, Kapel JS, Kapel BS, Fredensborg BL, Petersen AM, Hansen LH, Nielsen DS, Kapel HS, Jacobsen KR, Mikkelsen LF, Kapel CMO. Pre-clinical evaluation of the effect of co-medication with antibiotics and oral steroids in Göttingen Minipigs on the biological activity of the probiotic medicinal product TSO (Trichuris suis ova). Parasitology Research. PMID 33409625 DOI: 10.1007/s00436-020-07004-8  0.089
2009 Padonou SW, Schillinger U, Nielsen DS, Franz CMAP, Hansen M, Hounhouigan JD, Nago MC, Jakobsen M. Weissella beninensis sp. nov., a motile lactic acid bacterium from submerged cassava fermentations, and emended description of the genus Weissella. International Journal of Systematic and Evolutionary Microbiology. 60: 2193-2198. PMID 19897612 DOI: 10.1099/ijs.0.014332-0  0.089
2012 Hansen CH, Krych L, Nielsen DS, Vogensen FK, Hansen LH, Sørensen SJ, Buschard K, Hansen AK. Early life treatment with vancomycin propagates Akkermansia muciniphila and reduces diabetes incidence in the NOD mouse. Diabetologia. 55: 2285-94. PMID 22572803 DOI: 10.1007/s00125-012-2564-7  0.089
2013 Kaboré D, Nielsen DS, Sawadogo-Lingani H, Diawara B, Dicko MH, Jakobsen M, Thorsen L. Inhibition of Bacillus cereus growth by bacteriocin producing Bacillus subtilis isolated from fermented baobab seeds (maari) is substrate dependent. International Journal of Food Microbiology. 162: 114-9. PMID 23376785 DOI: 10.1016/j.ijfoodmicro.2012.12.027  0.089
2013 Adimpong DB, Nielsen DS, Sørensen KI, Vogensen FK, Sawadogo-Lingani H, Derkx PM, Jespersen L. Lactobacillus delbrueckii subsp. jakobsenii subsp. nov., isolated from dolo wort, an alcoholic fermented beverage in Burkina Faso. International Journal of Systematic and Evolutionary Microbiology. 63: 3720-6. PMID 23645015 DOI: 10.1099/ijs.0.048769-0  0.088
2017 Zachariassen LF, Krych L, Engkilde K, Nielsen DS, Kot W, Hansen CH, Hansen AK. Sensitivity to oxazolone induced dermatitis is transferable with gut microbiota in mice. Scientific Reports. 7: 44385. PMID 28290517 DOI: 10.1038/srep44385  0.088
2021 Hansen EB, Nielsen DS, LaPointe G. Editorial: microbial food and feed ingredients - functionality and health. Fems Microbiology Letters. 368. PMID 34551069 DOI: 10.1093/femsle/fnab120  0.088
2018 Kihl P, Krych L, Buschard K, Wesley JD, Kot W, Hansen AK, Nielsen DS, von Herrath MG. Oral insulin does not alter gut microbiota composition of NOD mice. Diabetes/Metabolism Research and Reviews. e3010. PMID 29637693 DOI: 10.1002/dmrr.3010  0.088
2012 Adimpong DB, Sørensen KI, Thorsen L, Stuer-Lauridsen B, Abdelgadir WS, Nielsen DS, Derkx PM, Jespersen L. Antimicrobial susceptibility of Bacillus strains isolated from primary starters for African traditional bread production and characterization of the bacitracin operon and bacitracin biosynthesis. Applied and Environmental Microbiology. 78: 7903-14. PMID 22941078 DOI: 10.1128/AEM.00730-12  0.087
2018 Grimaldi R, Gibson GR, Vulevic J, Giallourou N, Castro-Mejía JL, Hansen LH, Leigh Gibson E, Nielsen DS, Costabile A. A prebiotic intervention study in children with autism spectrum disorders (ASDs). Microbiome. 6: 133. PMID 30071894 DOI: 10.1186/s40168-018-0523-3  0.087
2014 Ramos CL, Thorsen L, Ryssel M, Nielsen DS, Siegumfeldt H, Schwan RF, Jespersen L. Effect of the gastrointestinal environment on pH homeostasis of Lactobacillus plantarum and Lactobacillus brevis cells as measured by real-time fluorescence ratio-imaging microscopy. Research in Microbiology. 165: 215-25. PMID 24607712 DOI: 10.1016/j.resmic.2014.02.005  0.087
2021 Orlien V, Aalaei K, Poojary MM, Nielsen DS, Ahrné L, Carrascal JR. Effect of processing on digestibility (IVPD) of food proteins. Critical Reviews in Food Science and Nutrition. 1-50. PMID 34590513 DOI: 10.1080/10408398.2021.1980763  0.086
2020 Castro-Mejía JL, O'Ferrall S, Krych Ł, O'Mahony E, Namusoke H, Lanyero B, Kot W, Nabukeera-Barungi N, Michaelsen KF, Mølgaard C, Friis H, Grenov B, Nielsen DS. Restitution of gut microbiota in Ugandan children administered with probiotics ( GG and subsp. BB-12) during treatment for severe acute malnutrition. Gut Microbes. 1-12. PMID 31959047 DOI: 10.1080/19490976.2020.1712982  0.086
2015 Ouoba LI, Nielsen DS, Anyogu A, Kando C, Diawara B, Jespersen L, Sutherland JP. Hanseniaspora jakobsenii sp. nov., a yeast isolated from Bandji, a traditional palm wine of Borassus akeassii. International Journal of Systematic and Evolutionary Microbiology. 65: 3576-9. PMID 26297247 DOI: 10.1099/ijsem.0.000461  0.086
2013 Owusu-Kwarteng J, Tano-Debrah K, Akabanda F, Nielsen DS, Jespersen L. Partial Characterization of Bacteriocins Produced by Lactobacillus reuteri 2-20B and Pediococcus acidilactici 0-11A Isolated from Fura, a Millet-Based Fermented Food in Ghana Journal of Food Research. 2: 50. DOI: 10.5539/JFR.V2N1P50  0.086
2015 Castro-Mejía JL, Muhammed MK, Kot W, Neve H, Franz CM, Hansen LH, Vogensen FK, Nielsen DS. Optimizing protocols for extraction of bacteriophages prior to metagenomic analyses of phage communities in the human gut. Microbiome. 3: 64. PMID 26577924 DOI: 10.1186/s40168-015-0131-4  0.085
2017 Williams AR, Hansen TVA, Krych L, Ahmad HFB, Nielsen DS, Skovgaard K, Thamsborg SM. Dietary cinnamaldehyde enhances acquisition of specific antibodies following helminth infection in pigs. Veterinary Immunology and Immunopathology. 189: 43-52. PMID 28669386 DOI: 10.1016/j.vetimm.2017.06.004  0.085
2016 Dorosz J, Castro-Mejia J, Hansen L, Nielsen D, Skovgaard A. Different microbiomes associated with the copepods Acartia tonsa and Temora longicornis from the same marine environment Aquatic Microbial Ecology. 78: 1-9. DOI: 10.3354/AME01799  0.084
2017 Muhammed MK, Krych L, Nielsen DS, Vogensen FK. A high-throughput qPCR system for simultaneous quantitative detection of dairy Lactococcus lactis and Leuconostoc bacteriophages. Plos One. 12: e0174223. PMID 28339484 DOI: 10.1371/journal.pone.0174223  0.084
2010 Hufeldt MR, Nielsen DS, Vogensen FK, Midtvedt T, Hansen AK. Variation in the gut microbiota of laboratory mice is related to both genetic and environmental factors. Comparative Medicine. 60: 336-47. PMID 21262117  0.083
2023 Larsen F, Offersen SM, Li VR, Deng L, Nielsen DS, Rasmussen TS. Choice of Ultrafilter Affects Recovery Rate of Bacteriophages. Viruses. 15. PMID 37896828 DOI: 10.3390/v15102051  0.083
2016 Damlund DSM, Metzdorff SB, Hasselby JP, Wiese M, Lundsager M, Nielsen DS, Buschard KS, Hansen AK, Frøkiær H. Postnatal hematopoiesis and gut microbiota in NOD mice deviate from C57BL/6 mice Journal of Diabetes Research. 2016. DOI: 10.1155/2016/6321980  0.082
2013 Nagy E, Niss M, Dlauchy D, Arneborg N, Nielsen DS, Péter G. Yarrowia divulgata f.a., sp. nov., a yeast species from animal-related and marine sources. International Journal of Systematic and Evolutionary Microbiology. 63: 4818-23. PMID 24158944 DOI: 10.1099/ijs.0.057208-0  0.082
2010 Larsen N, Vogensen FK, van den Berg FW, Nielsen DS, Andreasen AS, Pedersen BK, Al-Soud WA, Sørensen SJ, Hansen LH, Jakobsen M. Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults. Plos One. 5: e9085. PMID 20140211 DOI: 10.1371/journal.pone.0009085  0.082
2012 Kaboré D, Thorsen L, Nielsen DS, Berner TS, Sawadogo-Lingani H, Diawara B, Dicko MH, Jakobsen M. Bacteriocin formation by dominant aerobic sporeformers isolated from traditional maari. International Journal of Food Microbiology. 154: 10-8. PMID 22240061 DOI: 10.1016/j.ijfoodmicro.2011.12.003  0.082
2012 Szlavik J, Paiva DS, Mørk N, van den Berg F, Verran J, Whitehead K, Knøchel S, Nielsen DS. Initial adhesion of Listeria monocytogenes to solid surfaces under liquid flow International Journal of Food Microbiology. 152: 181-188. PMID 21968113 DOI: 10.1016/j.ijfoodmicro.2011.09.006  0.08
2020 Rasmussen TS, Mentzel CMJ, Kot W, Castro-Mejía JL, Zuffa S, Swann JR, Hansen LH, Vogensen FK, Hansen AK, Nielsen DS. Faecal virome transplantation decreases symptoms of type 2 diabetes and obesity in a murine model. Gut. PMID 32165408 DOI: 10.1136/gutjnl-2019-320005  0.079
2019 Wiese M, Bashmakov Y, Chalyk N, Nielsen DS, Krych Ł, Kot W, Klochkov V, Pristensky D, Bandaletova T, Chernyshova M, Kyle N, Petyaev I. Prebiotic Effect of Lycopene and Dark Chocolate on Gut Microbiome with Systemic Changes in Liver Metabolism, Skeletal Muscles and Skin in Moderately Obese Persons. Biomed Research International. 2019: 4625279. PMID 31317029 DOI: 10.1155/2019/4625279  0.079
2013 Mortensen C, Karlsen S, Grønbæk H, Nielsen DT, Frevert S, Clemmesen JO, Møller S, Jensen JS, Bendtsen F. No difference in portal and hepatic venous bacterial DNA in patients with cirrhosis undergoing transjugular intrahepatic portosystemic shunt insertion. Liver International : Official Journal of the International Association For the Study of the Liver. 33: 1309-15. PMID 23763259 DOI: 10.1111/liv.12205  0.078
2013 Adimpong DB, Sørensen KI, Nielsen DS, Thorsen L, Rasmussen TB, Derkx PM, Jespersen L. Draft Whole-Genome Sequence of Bacillus sonorensis Strain L12, a Source of Nonribosomal Lipopeptides. Genome Announcements. 1: e0009713. PMID 23538904 DOI: 10.1128/genomeA.00097-13  0.076
2020 Hjorth MF, Christensen L, Larsen TM, Roager HM, Krych L, Kot W, Nielsen DS, Ritz C, Astrup A. Pretreatment Prevotella-to-Bacteroides ratio and salivary amylase gene copy number as prognostic markers for dietary weight loss. The American Journal of Clinical Nutrition. PMID 32034403 DOI: 10.1093/ajcn/nqaa007  0.075
2022 Johansen J, Plichta DR, Nissen JN, Jespersen ML, Shah SA, Deng L, Stokholm J, Bisgaard H, Nielsen DS, Sørensen SJ, Rasmussen S. Genome binning of viral entities from bulk metagenomics data. Nature Communications. 13: 965. PMID 35181661 DOI: 10.1038/s41467-022-28581-5  0.075
2018 Boysen AK, Jensen M, Nielsen DT, Mortensen FV, Sørensen BS, Jensen AR, Spindler KL. Cell-free DNA and chemoembolization in patients with liver metastases from colorectal cancer. Oncology Letters. 16: 2654-2660. PMID 30013661 DOI: 10.3892/ol.2018.8925  0.074
2016 Kristensen KH, Wiese M, Rytter MJ, Özçam M, Hansen LH, Namusoke H, Friis H, Nielsen DS. Gut Microbiota in Children Hospitalized with Oedematous and Non-Oedematous Severe Acute Malnutrition in Uganda. Plos Neglected Tropical Diseases. 10: e0004369. PMID 26771456 DOI: 10.1371/journal.pntd.0004369  0.073
2016 Laursen TL, Rødgaard-Hansen S, Møller HJ, Mortensen C, Karlsen S, Nielsen DT, Frevert S, Clemmesen JO, Møller S, Jensen JS, Bendtsen F, Grønbaek H. The soluble mannose receptor is released from the liver in cirrhotic patients, but is not associated with bacterial translocation. Liver International : Official Journal of the International Association For the Study of the Liver. PMID 27706896 DOI: 10.1111/liv.13262  0.072
2023 Aldubayan MA, Mao X, Laursen MF, Pigsborg K, Christensen LH, Roager HM, Nielsen DS, Hjorth MF, Magkos F. Supplementation with inulin-type fructans affects gut microbiota and attenuates some of the cardiometabolic benefits of a plant-based diet in individuals with overweight or obesity. Frontiers in Nutrition. 10: 1108088. PMID 37181156 DOI: 10.3389/fnut.2023.1108088  0.071
2013 Lederer MA, Nielsen DS, Toldam-Andersen TB, Herrmann JV, Arneborg N. Yeast species associated with different wine grape varieties in Denmark Acta Agriculturae Scandinavica, Section B - Soil & Plant Science. 63: 89-96. DOI: 10.1080/09064710.2012.723738  0.07
2020 Rønne MHH, Cho D, Madsen MR, Jakobsen JB, Eom S, Escoudé É, Hammershøj HCD, Nielsen DU, Pedersen SU, Baik MH, Skrydstrup T, Daasbjerg K. Ligand Controlled Product Selectivity in the Electrochemical Carbon Dioxide Reduction Using Manganese Bipyridine Catalysts. Journal of the American Chemical Society. PMID 32022558 DOI: 10.1021/Jacs.9B11806  0.07
2021 Khakimov B, Hoefsloot HCJ, Mobaraki N, Aru V, Kristensen M, Lind MV, Holm L, Castro-Mejía JL, Nielsen DS, Jacobs DM, Smilde AK, Engelsen SB. Human Blood Lipoprotein Predictions from H NMR Spectra: Protocol, Model Performances, and Cage of Covariance. Analytical Chemistry. 94: 628-636. PMID 34936323 DOI: 10.1021/acs.analchem.1c01654  0.069
2014 Lescot C, Nielsen DU, Makarov IS, Lindhardt AT, Daasbjerg K, Skrydstrup T. Efficient fluoride-catalyzed conversion of CO2 to CO at room temperature. Journal of the American Chemical Society. 136: 6142-7. PMID 24702475 DOI: 10.1021/Ja502911E  0.068
2022 Fatemizadeh SS, Krych L, Castro-Mejía JL, Stefanova DV, Kot W, Habibi Najafi MB, Nielsen DS. Complete Genome Sequences of Three Lactiplantibacillus plantarum Strains Isolated from Traditional Iranian Raw Milk Motal Cheese. Microbiology Resource Announcements. e0047922. PMID 36475910 DOI: 10.1128/mra.00479-22  0.068
2018 Skrydstrup T, Neumann K, Donslund A, Andersen T, Nielsen D. Synthesis of Aliphatic Carboxamides Mediated by Nickel NN2-Pincer Complexes and Adaptation to Carbon Isotope-Labeling. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 30106491 DOI: 10.1002/Chem.201804077  0.067
2019 Collin HP, Reis WJ, Nielsen DU, Lindhardt AT, Valle MS, Freitas RP, Skrydstrup T. COtab: Expedient and Safe Setup for Pd-Catalyzed Carbonylation Chemistry. Organic Letters. PMID 31117713 DOI: 10.1021/Acs.Orglett.9B01423  0.066
2022 He W, Xie Z, Wittig NK, Zachariassen LF, Andersen A, Andersen HJ, Birkedal H, Nielsen DS, Hansen AK, Bertram HC. Yogurt Benefits Bone Mineralization in Ovariectomized Rats with Concomitant Modulation of the Gut Microbiome. Molecular Nutrition & Food Research. e2200174. PMID 36039478 DOI: 10.1002/mnfr.202200174  0.066
2015 Jensen C, Penny JØ, Nielsen DB, Overgaard S, Holsgaard-Larsen A. Quantifying Gait Quality in Patients with Large-Head and Conventional Total Hip Arthroplasty-A Prospective Cohort Study. The Journal of Arthroplasty. PMID 26278486 DOI: 10.1016/j.arth.2015.06.049  0.066
2018 Andersen IR, Thorup K, Jepsen BN, Mortensen FV, Nielsen DT, Rasmussen F. Dynamic contrast-enhanced computed tomography in the treatment evaluation of patients with colorectal liver metastases treated with ablation: a feasibility study. Acta Radiologica (Stockholm, Sweden : 1987). 284185118806661. PMID 30335477 DOI: 10.1177/0284185118806661  0.065
2018 Sagnelli D, Chessa S, Mandalari G, Di Martino M, Sorndech W, Mamone G, Vincze E, Buillon G, Nielsen DS, Wiese M, Blennow A, Hebelstrup KH. Low glycaemic index foods from wild barley and amylose-only barley lines Journal of Functional Foods. 40: 408-416. DOI: 10.1016/J.JFF.2017.11.028  0.064
2019 Lanyero B, Grenov B, Barungi NN, Namusoke H, Michaelsen KF, Mupere E, Mølgaard C, Jiang P, Frøkiær H, Wiese M, Muhammed MK, Pesu H, Nielsen DS, Friis H, Rytter MJ, et al. Correlates of gut function in children hospitalized for severe acute malnutrition, a cross-sectional study in Uganda. Journal of Pediatric Gastroenterology and Nutrition. PMID 31169661 DOI: 10.1097/MPG.0000000000002381  0.061
2011 Sømark J, Jørgensen JI, Hynding HJ, Kaag L, Aagaard NK, Nielsen DT. [Picture of the month: portal vein thrombosis]. Ugeskrift For Laeger. 173: 902. PMID 21419063  0.061
2018 Tougaard P, Martinsen LO, Zachariassen LF, Krych L, Nielsen DS, Buus TB, Pedersen AE, Hansen AK, Skov S, Hansen CHF. TL1A Aggravates Cytokine-Induced Acute Gut Inflammation and Potentiates Infiltration of Intraepithelial Natural Killer Cells in Mice. Inflammatory Bowel Diseases. PMID 30462201 DOI: 10.1093/ibd/izy351  0.061
2020 Raun SH, Henriquez-Olguín C, Karavaeva I, Ali M, Møller LLV, Kot W, Castro-Mejía JL, Nielsen DS, Gerhart-Hines Z, Richter EA, Sylow L. Housing temperature influences exercise training adaptations in mice. Nature Communications. 11: 1560. PMID 32214091 DOI: 10.1038/s41467-020-15311-y  0.059
2011 Smigic N, Rajkovic A, Arneborg N, Siegumfeldt H, Devlieghere F, Nielsen DS. Analysis of Intracellular pH in Escherichia coli O157:H7 to Determine the Effect of Chlorine Dioxide Decontamination Food Analytical Methods. 5: 327-331. DOI: 10.1007/s12161-011-9295-0  0.058
2016 Castro-Mejiá J, Jakesevic M, Krych Ł, Nielsen DS, Hansen LH, Sondergaard BC, Kvist PH, Hansen AK, Holm TL. Treatment with a Monoclonal Anti-IL-12p40 Antibody Induces Substantial Gut Microbiota Changes in an Experimental Colitis Model Gastroenterology Research and Practice. 2016. DOI: 10.1155/2016/4953120  0.056
2002 Grønbaek H, Nielsen DT, Astrup LB. [Budd-Chiari syndrome illustrated by four case reports]. Ugeskrift For Laeger. 164: 3360-3. PMID 12107952  0.056
2021 Nabukeera-Barungi N, Lanyero B, Grenov B, Friis H, Namusoke H, Mupere E, Michaelsen KF, Mølgaard C, Wiese M, Nielsen DS, Mohammed MK, Christensen VB, Rytter M. Thymus size and its correlates among children admitted with severe acute malnutrition: a cross-sectional study in Uganda. Bmc Pediatrics. 21: 1. PMID 33397296 DOI: 10.1186/s12887-020-02457-3  0.056
2015 Jensen KL, Nielsen DU, Jamison TF. A General Strategy for the Synthesis of Enantiomerically Pure Azetidines and Aziridines through Nickel-Catalyzed Cross-Coupling. Chemistry (Weinheim An Der Bergstrasse, Germany). 21: 7379-83. PMID 25820027 DOI: 10.1002/Chem.201500886  0.055
2018 Nielsen DU, Neumann KT, Skrydstrup T. New Directions in Transition Metal Catalyzed Carbonylation Chemistry. Chimia. 72: 606-609. PMID 30257735 DOI: 10.2533/Chimia.2018.606  0.055
2016 Jensen MT, Juhl M, Nielsen DU, Jacobsen MF, Lindhardt AT, Skrydstrup T. Palladium-Catalyzed Carbonylative α-Arylation of tert-Butyl Cyanoacetate with (Hetero)aryl Bromides. The Journal of Organic Chemistry. 81: 1358-66. PMID 26807594 DOI: 10.1021/Acs.Joc.5B02897  0.055
2018 Jahn LJ, Mason B, Brøgger P, Toteva T, Nielsen DK, Thon G. Dependency of Heterochromatin Domains on Replication Factors. G3 (Bethesda, Md.). 8: 477-489. PMID 29187422 DOI: 10.1534/g3.117.300341  0.055
2008 Sørensen SM, Mortensen FV, Nielsen DT. [Radiofrequency ablation in the treatment of colorectal liver metastases--a secondary publication]. Ugeskrift For Laeger. 170: 1361-3. PMID 18433601  0.054
2016 Bechshøft RL, Reitelseder S, Højfeldt G, Castro-Mejía JL, Khakimov B, Ahmad HF, Kjær M, Engelsen SB, Johansen SM, Rasmussen MA, Lassen AJ, Jensen T, Beyer N, Serena A, Perez-Cueto FJ, ... Nielsen DS, et al. Counteracting Age-related Loss of Skeletal Muscle Mass: a clinical and ethnological trial on the role of protein supplementation and training load (CALM Intervention Study): study protocol for a randomized controlled trial. Trials. 17: 397. PMID 27507236 DOI: 10.1186/s13063-016-1512-0  0.054
2015 Jensen C, Rosenlund S, Nielsen DB, Overgaard S, Holsgaard-Larsen A. The use of the Gait Deviation Index for the evaluation of participants following total hip arthroplasty: An explorative randomized trial. Gait & Posture. 42: 36-41. PMID 25957650 DOI: 10.1016/j.gaitpost.2015.02.009  0.054
2016 Kristensen KHS, Wiese M, Rytter MJH, Özçam M, Hansen LH, Namusoke H, Friis H, Nielsen DS. Gut Microbiota in Children Hospitalized with Oedematous and Non-Oedematous Severe Acute Malnutrition in Uganda Plos Neglected Tropical Diseases. 10. DOI: 10.1371/journal.pntd.0004369  0.053
2016 Lian Z, Nielsen DU, Lindhardt AT, Daasbjerg K, Skrydstrup T. Cooperative redox activation for carbon dioxide conversion. Nature Communications. 7: 13782. PMID 27981967 DOI: 10.1038/Ncomms13782  0.053
2012 Lauridsen MEM, Mortensen FV, Nielsen DT, Grønbæk H. Creation of a fistula between the hepatic duct and the gastric lumen by way of percutaneus transhepatic cholangiography: A case report Journal of Gastrointestinal Cancer. 43: 354-357. PMID 20862565 DOI: 10.1007/s12029-010-9212-6  0.052
2019 Ravn AK, Vilstrup MBT, Nørby P, Nielsen DU, Daasbjerg K, Skrydstrup T. A Carbon Isotope Labeling Strategy for β-Amino Acid Derivatives via Carbonylation of Azanickellacycles. Journal of the American Chemical Society. PMID 31310710 DOI: 10.1021/Jacs.9B05934  0.051
2009 Holland-Fischer P, Vilstrup H, Frystyk J, Nielsen DT, Flyvbjerg A, Grønbaek H. The IGF system after insertion of a transjugular intrahepatic porto-systemic shunt in patients with liver cirrhosis. European Journal of Endocrinology. 160: 957-63. PMID 19336524 DOI: 10.1530/EJE-08-0971  0.05
2003 Astrup LB, Grønbaek H, Redsted S, Nielsen DT, Vilstrup H. [TIPS--transjugular intrahepatic portosystemic shunt. Experiences from a recently started center]. Ugeskrift For Laeger. 165: 443-6. PMID 12599839  0.049
2018 Nielsen DU, Neumann KT, Lindhardt AT, Skrydstrup T. Recent Developments in Carbonylation Chemistry Using [ C]CO, [ C]CO and [ C]CO. Journal of Labelled Compounds & Radiopharmaceuticals. PMID 29858516 DOI: 10.1002/Jlcr.3645  0.048
2016 Klindt-Toldam S, Larsen SK, Saaby L, Olsen LR, Svenstrup G, Müllertz A, Knøchel S, Heimdal H, Nielsen DS, Zielińska D. Survival of Lactobacillus acidophilus NCFM® and Bifidobacterium lactis HN019 encapsulated in chocolate during in vitro simulated passage of the upper gastrointestinal tract Lwt. 74: 404-410. DOI: 10.1016/J.LWT.2016.07.053  0.048
2017 Skrydstrup T, Flinker M, Yin H, Juhl R, Eikeland E, Overgaard J, Nielsen D. Efficient Water Reduction with sp3-sp3 Diboron(4) Compounds: Application to Hydrogenations, H-D Exchange Reactions and Carbonyl Reductions. Angewandte Chemie (International Ed. in English). PMID 29076608 DOI: 10.1002/Anie.201709685  0.048
2012 Gøgsig TM, Nielsen DU, Lindhardt AT, Skrydstrup T. Palladium catalyzed carbonylative Heck reaction affording monoprotected 1,3-ketoaldehydes. Organic Letters. 14: 2536-9. PMID 22564004 DOI: 10.1021/Ol300837D  0.047
2019 Andersen IR, Thorup K, Andersen MB, Olesen R, Mortensen FV, Nielsen DT, Rasmussen F. Texture in the monitoring of regorafenib therapy in patients with colorectal liver metastases. Acta Radiologica (Stockholm, Sweden : 1987). 284185118817940. PMID 30612433 DOI: 10.1177/0284185118817940  0.047
2018 Sørensen H, Nielsen DB, Jacobsen JS, Søballe K, Mechlenburg I. Isokinetic dynamometry and gait analysis reveal different hip joint status in patients with hip dysplasia. Hip International : the Journal of Clinical and Experimental Research On Hip Pathology and Therapy. 1120700018773401. PMID 29739283 DOI: 10.1177/1120700018773401  0.046
2020 Sørensen H, Skalshøi O, Nielsen DB, Jacobsen JS, Søballe K, Mechlenburg I. Hip muscle and joint contact forces before, 6 and 12 months after minimally invasive periacetabular osteotomy. Hip International : the Journal of Clinical and Experimental Research On Hip Pathology and Therapy. 1120700020925411. PMID 32366122 DOI: 10.1177/1120700020925411  0.046
2014 Jacobsen JS, Nielsen DB, Sørensen H, Søballe K, Mechlenburg I. Joint kinematics and kinetics during walking and running in 32 patients with hip dysplasia 1 year after periacetabular osteotomy. Acta Orthopaedica. 85: 592-9. PMID 25191933 DOI: 10.3109/17453674.2014.960167  0.046
2011 Nielsen DU, Taaning RH, Lindhardt AT, Gøgsig TM, Skrydstrup T. Palladium-catalyzed approach to primary amides using nongaseous precursors. Organic Letters. 13: 4454-7. PMID 21790124 DOI: 10.1021/Ol201808Y  0.046
2013 Jacobsen JS, Nielsen DB, Sørensen H, Søballe K, Mechlenburg I. Changes in walking and running in patients with hip dysplasia. Acta Orthopaedica. 84: 265-70. PMID 23594221 DOI: 10.3109/17453674.2013.792030  0.046
2018 Andersen IR, Olesen R, Boysen AK, Jensen LH, Mortensen FV, Nielsen DT, Rasmussen F. Dynamic contrast-enhanced computed tomography as a potential biomarker in patients with metastatic colorectal cancer treated with regorafenib. Acta Radiologica (Stockholm, Sweden : 1987). 284185118806652. PMID 30348001 DOI: 10.1177/0284185118806652  0.045
2021 Mertz KH, Reitelseder S, Bechshoeft R, Bulow J, Højfeldt G, Jensen M, Schacht SR, Lind MV, Rasmussen MA, Mikkelsen UR, Tetens I, Engelsen SB, Nielsen DS, Jespersen AP, Holm L. The effect of daily protein supplementation, with or without resistance training for 1 year, on muscle size, strength, and function in healthy older adults: A randomized controlled trial. The American Journal of Clinical Nutrition. PMID 33564844 DOI: 10.1093/ajcn/nqaa372  0.045
2005 Keiding S, Munk OL, Vilstrup H, Nielsen DT, Roelsgaard K, Bass L. Hepatic microcirculation assessed by positron emission tomography of first-pass ammonia metabolism in porcine liver. Liver International : Official Journal of the International Association For the Study of the Liver. 25: 171-6. PMID 15698415 DOI: 10.1111/j.1478-3231.2005.01032.x  0.045
2015 Rasmussen HM, Nielsen DB, Pedersen NW, Overgaard S, Holsgaard-Larsen A. Gait Deviation Index, Gait Profile Score and Gait Variable Score in children with spastic cerebral palsy: Intra-rater reliability and agreement across two repeated sessions. Gait & Posture. 42: 133-7. PMID 26043670 DOI: 10.1016/j.gaitpost.2015.04.019  0.045
2010 Ramstrand N, Thuesen AH, Nielsen DB, Rusaw D. Effects of an unstable shoe construction on balance in women aged over 50 years. Clinical Biomechanics (Bristol, Avon). 25: 455-60. PMID 20176420 DOI: 10.1016/j.clinbiomech.2010.01.014  0.044
2017 Jensen MT, Rønne MH, Ravn AK, Juhl RW, Nielsen DU, Hu XM, Pedersen SU, Daasbjerg K, Skrydstrup T. Scalable carbon dioxide electroreduction coupled to carbonylation chemistry. Nature Communications. 8: 489. PMID 28887452 DOI: 10.1038/S41467-017-00559-8  0.044
2009 Knudsen AR, Kannerup AS, Mortensen FV, Nielsen DT. Radiofrequency ablation of colorectal liver metastases downstaged by chemotherapy. Acta Radiologica (Stockholm, Sweden : 1987). 50: 716-21. PMID 19488894 DOI: 10.1080/02841850902991634  0.043
2003 Grønbaek H, Astrup LB, Nielsen DT, Vilstrup H. [Transjugular intrahepatic portosystemic shunt (TIPS) for the treatment of complications of portal hypertension in patients with liver cirrhosis]. Ugeskrift For Laeger. 165: 439-42. PMID 12599838  0.043
2011 Parkouda C, Sanou H, Tougiani A, Korbo A, Nielsen DS, Tano-Debrah K, Ræbild A, Diawara B, Jensen JS. Variability of Baobab (Adansonia digitata L.) fruits’ physical characteristics and nutrient content in the West African Sahel Agroforestry Systems. 85: 455-463. DOI: 10.1007/s10457-011-9406-3  0.042
2022 He W, Xie Z, Thøgersen R, Rasmussen MK, Zachariassen LF, Jørgensen NR, Nørgaard JV, Andersen HJ, Nielsen DS, Hansen AK, Bertram HC. Effects of Calcium Source, Inulin, and Lactose on Gut-Bone Associations in an Ovarierectomized Rat Model. Molecular Nutrition & Food Research. e2100883. PMID 35107857 DOI: 10.1002/mnfr.202100883  0.042
2007 Astrup LB, Clemmesen JO, Frevert SC, Larsen FS, Nielsen DT, Schlichting P, Vilstrup H. [Treatment of portal hypertension with transjugular intrahepatic portosystemic shunt: guidelines for referring suitable patients]. Ugeskrift For Laeger. 169: 2758-61. PMID 17878010  0.042
2012 Karlsen S, Nielsen DT, Grønbæk H. [Chronic Budd-Chiari syndrome can cause liver cirrhosis]. Ugeskrift For Laeger. 174: 1677-9. PMID 22681996  0.041
2018 Wille-Jørgensen P, Syk I, Smedh K, Laurberg S, Nielsen DT, Petersen SH, Renehan AG, Horváth-Puhó E, Påhlman L, Sørensen HT. Effect of More vs Less Frequent Follow-up Testing on Overall and Colorectal Cancer-Specific Mortality in Patients With Stage II or III Colorectal Cancer: The COLOFOL Randomized Clinical Trial. Jama. 319: 2095-2103. PMID 29800179 DOI: 10.1001/jama.2018.5623  0.041
2017 Staanum PF, Arveschoug AK, Kramer SM, Nielsen JE, Nielsen DT, Ott P, Grønbæk H, Villadsen GE. [Nuclear medicine techniques for selective internal radiotherapy of liver cancer]. Ugeskrift For Laeger. 179. PMID 28074772  0.041
2016 Slyngborg M, Nielsen DA, Fojan P. The Physical Properties and Self-Assembly Potential of the RFFFR Peptide. Chembiochem : a European Journal of Chemical Biology. 17: 2083-2092. PMID 27581944 DOI: 10.1002/cbic.201600383  0.04
2013 Nielsen DU, Lescot C, Gøgsig TM, Lindhardt AT, Skrydstrup T. Pd-catalyzed carbonylative α-arylation of aryl bromides: scope and mechanistic studies. Chemistry (Weinheim An Der Bergstrasse, Germany). 19: 17926-38. PMID 24265100 DOI: 10.1002/Chem.201303384  0.039
2016 Olsen EV, Christensen LB, Nielsen DB. A review of computed tomography and manual dissection for calibration of devices for pig carcass classification - Evaluation of uncertainty. Meat Science. 123: 35-44. PMID 27614178 DOI: 10.1016/j.meatsci.2016.08.013  0.038
2012 Nielsen DU, Neumann K, Taaning RH, Lindhardt AT, Modvig A, Skrydstrup T. Palladium-catalyzed double carbonylation using near stoichiometric carbon monoxide: expedient access to substituted 13C2-labeled phenethylamines. The Journal of Organic Chemistry. 77: 6155-65. PMID 22725263 DOI: 10.1021/Jo3009337  0.038
2014 Andersen KJ, Grønbaek H, Villadsen GE, Knudsen AR, Ott P, Vildstrup H, Nielsen DT, Bharadwaz A. Chemoembolization of intermediate stage hepatocellular carcinomas: results from a Nordic tertiary liver cancer center. Indian Journal of Gastroenterology : Official Journal of the Indian Society of Gastroenterology. 33: 322-9. PMID 24307495 DOI: 10.1007/s12664-013-0428-9  0.036
2013 Neumann AB, Andersen SD, Nielsen DT, Holland-Fischer P, Vilstrup H, Grønbæk H. Treatment of Budd-Chiari syndrome with a focus on transjugular intrahepatic portosystemic shunt. World Journal of Hepatology. 5: 38-42. PMID 23383365 DOI: 10.4254/wjh.v5.i1.38  0.036
2021 Jacobsen NMY, Nedergaard HB, Kock A, Caglayan I, Laursen MM, Lange E, Marcial-Coba MS, Bar-Shalom D, Nielsen DS, Müllertz A. Development of gastro-resistant coated probiotic granulates and evaluation of viability and release during simulated upper gastrointestinal transit Lwt. 144: 111174. DOI: 10.1016/J.LWT.2021.111174  0.036
2015 Hall M, Nielsen JH, Holsgaard-Larsen A, Nielsen DB, Creaby MW, Thorlund JB. Forward lunge knee biomechanics before and after partial meniscectomy. The Knee. PMID 25907262 DOI: 10.1016/j.knee.2015.03.005  0.035
2010 Adamsen S, Nielsen DT. [Transarterial embolization in bleeding peptic ulcer]. Ugeskrift For Laeger. 172: 1356. PMID 20444403  0.035
2019 Marcial-Coba MS, Pjaca AS, Andersen CJ, Knøchel S, Nielsen DS. Dried date paste as carrier of the proposed probiotic Bacillus coagulans BC4 and viability assessment during storage and simulated gastric passage Lwt. 99: 197-201. DOI: 10.1016/J.LWT.2018.09.052  0.034
2014 Morgen SS, Nielsen DH, Larsen CF, Søgaard R, Engelholm SA, Dahl B. Moderate precision of prognostic scoring systems in a consecutive, prospective cohort of 544 patients with metastatic spinal cord compression. Journal of Cancer Research and Clinical Oncology. 140: 2059-64. PMID 25035249 DOI: 10.1007/s00432-014-1776-2  0.033
2002 Nielsen DT, Laursen HB, Rokkjaer M, Astrup LB. [Radiofrequency ablation of malignant liver tumors]. Ugeskrift For Laeger. 164: 4642-5. PMID 12380115  0.032
2003 Hougaard K, Vester AE, Holme JB, Nielsen DT, Christensen EF. Initial treatment of patients with unstable pelvic fractures and hemorrhagic shock Ugeskrift For Laeger. 165: 4291-4294. PMID 14635326  0.031
2007 Nielsen DT. [Invasive radiology and life-threatening hemorrhage. The Danish Society of Radiology]. Ugeskrift For Laeger. 169: 1129. PMID 17394840  0.031
2007 Nykjaer KM, Grønbaek H, Nielsen DT, Christiansen P, Astrup LB. Description of patients with midgut carcinoid tumours: clinical database from a Danish centre. In Vivo (Athens, Greece). 21: 679-84. PMID 17708366  0.029
2008 Kannerup AS, Nielsen DT, Sørensen SM, Mortensen FV. [Combined liver resection and radiofrequency ablation for colorectal liver metastases]. Ugeskrift For Laeger. 170: 1338-41. PMID 18433593  0.029
2015 Bharadwaz A, Bak-Fredslund KP, Villadsen GE, Nielsen JE, Simonsen K, Sandahl TD, Grønbæk H, Nielsen DT. Combination of radiofrequency ablation with transarterial chemoembolization for treatment of hepatocellular carcinoma: experience from a Danish tertiary liver center. Acta Radiologica (Stockholm, Sweden : 1987). PMID 26342009 DOI: 10.1177/0284185115603246  0.029
2015 Skalshøi O, Iversen CH, Nielsen DB, Jacobsen J, Mechlenburg I, Søballe K, Sørensen H. Walking patterns and hip contact forces in patients with hip dysplasia. Gait & Posture. PMID 26365370 DOI: 10.1016/j.gaitpost.2015.08.008  0.028
2014 Nielsen DH, Gehrchen M, Hansen LV, Walbom J, Dahl B. Inter- and Intra-rater Agreement in Assessment of Adult Spinal Deformity Using the Scoliosis Research Society-Schwab Classification. Spine Deformity. 2: 40-47. PMID 27927441 DOI: 10.1016/j.jspd.2013.09.005  0.021
2005 Ohman EM, Nanas J, Stomel RJ, Leesar MA, Nielsen DW, O'Dea D, Rogers FJ, Harber D, Hudson MP, Fraulo E, Shaw LK, Lee KL. Thrombolysis and counterpulsation to improve survival in myocardial infarction complicated by hypotension and suspected cardiogenic shock or heart failure: results of the TACTICS Trial. Journal of Thrombosis and Thrombolysis. 19: 33-9. PMID 15976965 DOI: 10.1007/s11239-005-0938-0  0.018
2013 Korsager S, Nielsen DU, Taaning RH, Lindhardt AT, Skrydstrup T. Direct route to 1,3-diketones by palladium-catalyzed carbonylative coupling of aryl halides with acetylacetone. Chemistry (Weinheim An Der Bergstrasse, Germany). 19: 17687-91. PMID 24353081 DOI: 10.1002/Chem.201303872  0.016
2016 Bohn MB, Petersen AK, Nielsen DB, Sørensen H, Lind M. Three-dimensional kinematic and kinetic analysis of knee rotational stability in ACL-deficient patients during walking, running and pivoting. Journal of Experimental Orthopaedics. 3: 27. PMID 27730595 DOI: 10.1186/s40634-016-0062-4  0.015
2002 Grønbaek H, Nielsen DT, Astrup LB, Vilstrup H. [Budd-Chiari syndrome. Diagnosis and treatment]. Ugeskrift For Laeger. 164: 3327-9. PMID 12107944  0.015
2013 Korsager S, Nielsen DU, Taaning RH, Skrydstrup T. Access to β-keto esters by palladium-catalyzed carbonylative coupling of aryl halides with monoester potassium malonates. Angewandte Chemie (International Ed. in English). 52: 9763-6. PMID 23881598 DOI: 10.1002/Anie.201304072  0.013
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