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Daisuke Nakada, Ph.D. - Publications

Affiliations: 
2006-2011 University of Michigan, Ann Arbor, Ann Arbor, MI 
 2011- Department of Molecular and Human Genetics Baylor College of Medicine, Houston, TX 
Website:
https://www.bcm.edu/research/labs/daisuke-nakada
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54 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Takahashi K, Nakada D, Goodell M. Distinct landscape and clinical implications of therapy-related clonal hematopoiesis. The Journal of Clinical Investigation. 134. PMID 39352380 DOI: 10.1172/JCI180069  0.429
2024 Uryu H, Saeki K, Haeno H, Kapadia CD, Furudate K, Nangalia J, Chapman MS, Zhao L, Hsu JI, Zhao C, Chen S, Tanaka T, Li Z, Yang H, DiNardo C, ... ... Nakada D, et al. Clonal evolution of hematopoietic stem cells after cancer chemotherapy. Biorxiv : the Preprint Server For Biology. PMID 38826462 DOI: 10.1101/2024.05.23.595594  0.542
2024 Shi X, Feng M, Nakada D. Metabolic dependencies of acute myeloid leukemia stem cells. International Journal of Hematology. PMID 38750343 DOI: 10.1007/s12185-024-03789-x  0.831
2024 Tseng YJ, Kageyama Y, Murdaugh RL, Kitano A, Kim JH, Hoegenauer KA, Tiessen J, Smith MH, Uryu H, Takahashi K, Martin JF, Samee MAH, Nakada D. Increased iron uptake by splenic hematopoietic stem cells promotes TET2-dependent erythroid regeneration. Nature Communications. 15: 538. PMID 38225226 DOI: 10.1038/s41467-024-44718-0  0.781
2022 Burgess RJ, Zhao Z, Nakada D, Morrison SJ. Bmi1 suppresses protein synthesis and promotes proteostasis in hematopoietic stem cells. Genes & Development. PMID 36167470 DOI: 10.1101/gad.349917.122  0.422
2022 Eagle K, Jiang Y, Shi X, Li M, Obholzer ND, Hu T, Perez MW, Koren JV, Kitano A, Yi JS, Lin CY, Nakada D. An oncogenic enhancer encodes selective selenium dependency in AML. Cell Stem Cell. 29: 650. PMID 35395189 DOI: 10.1016/j.stem.2022.03.006  0.762
2022 Eagle K, Jiang Y, Shi X, Li M, Obholzer NP, Hu T, Perez MW, Koren JV, Kitano A, Yi JS, Lin CY, Nakada D. An oncogenic enhancer encodes selective selenium dependency in AML. Cell Stem Cell. PMID 35108519 DOI: 10.1016/j.stem.2022.01.003  0.797
2022 Wang Y, Huo T, Tseng YJ, Dang L, Yu Z, Yu W, Foulks Z, Murdaugh RL, Ludtke SJ, Nakada D, Wang Z. Using Cryo-ET to distinguish platelets during pre-acute myeloid leukemia from steady state hematopoiesis. Communications Biology. 5: 72. PMID 35058565 DOI: 10.1038/s42003-022-03009-4  0.785
2021 Shi X, Jiang Y, Kitano A, Hu T, Murdaugh RL, Li Y, Hoegenauer KA, Chen R, Takahashi K, Nakada D. Nuclear NAD homeostasis governed by NMNAT1 prevents apoptosis of acute myeloid leukemia stem cells. Science Advances. 7. PMID 34290089 DOI: 10.1126/sciadv.abf3895  0.829
2021 Murdaugh RL, Hoegenauer KA, Kitano A, Holt MV, Hill MC, Shi X, Tiessen JF, Chapple R, Hu T, Tseng YJ, Lin A, Martin JF, Young NL, Nakada D. The histone H3.3 chaperone HIRA restrains erythroid-biased differentiation of adult hematopoietic stem cells. Stem Cell Reports. PMID 34242617 DOI: 10.1016/j.stemcr.2021.06.009  0.776
2021 Morita K, Wang F, Jahn K, Hu T, Tanaka T, Sasaki Y, Kuipers J, Loghavi S, Wang SA, Yan Y, Furudate K, Matthews J, Little L, Gumbs C, Zhang J, ... ... Nakada D, et al. Author Correction: Clonal evolution of acute myeloid leukemia revealed by high-throughput single-cell genomics. Nature Communications. 12: 2823. PMID 33972555 DOI: 10.1038/s41467-021-23280-z  0.605
2021 Takahashi M, Barile M, Chapple RH, Tseng YJ, Nakada D, Busch K, Fanti AK, Säwén P, Bryder D, Höfer T, Göttgens B. Reconciling Flux Experiments for Quantitative Modeling of Normal and Malignant Hematopoietic Stem/Progenitor Dynamics. Stem Cell Reports. PMID 33770496 DOI: 10.1016/j.stemcr.2021.02.020  0.823
2020 Morita K, Wang F, Jahn K, Hu T, Tanaka T, Sasaki Y, Kuipers J, Loghavi S, Wang SA, Yan Y, Furudate K, Matthews J, Little L, Gumbs C, Zhang J, ... ... Nakada D, et al. Publisher Correction: Clonal evolution of acute myeloid leukemia revealed by high-throughput single-cell genomics. Nature Communications. 11: 5996. PMID 33214561 DOI: 10.1038/s41467-020-19902-7  0.587
2020 Morita K, Wang F, Jahn K, Hu T, Tanaka T, Sasaki Y, Kuipers J, Loghavi S, Wang SA, Yan Y, Furudate K, Matthews J, Little L, Gumbs C, Zhang J, ... ... Nakada D, et al. Clonal evolution of acute myeloid leukemia revealed by high-throughput single-cell genomics. Nature Communications. 11: 5327. PMID 33087716 DOI: 10.1038/s41467-020-19119-8  0.642
2020 Xu L, Liu X, Peng F, Zhang W, Zheng L, Ding Y, Gu T, Lv K, Wang J, Ortinau L, Hu T, Shi X, Shi G, Shang G, Sun S, ... ... Nakada D, et al. Protein quality control through endoplasmic reticulum-associated degradation maintains haematopoietic stem cell identity and niche interactions. Nature Cell Biology. PMID 32958856 DOI: 10.1038/S41556-020-00581-X  0.833
2020 Lee H, Zandkarimi F, Zhang Y, Meena JK, Kim J, Zhuang L, Tyagi S, Ma L, Westbrook TF, Steinberg GR, Nakada D, Stockwell BR, Gan B. Energy-stress-mediated AMPK activation inhibits ferroptosis. Nature Cell Biology. 22: 225-234. PMID 32029897 DOI: 10.1038/S41556-020-0461-8  0.329
2019 King KY, Huang Y, Nakada D, Goodell MA. Environmental Influences on Clonal Hematopoiesis. Experimental Hematology. PMID 31893524 DOI: 10.1016/J.Exphem.2019.12.005  0.545
2019 Jiang Y, Hu T, Wang T, Shi X, Kitano A, Eagle K, Hoegenauer KA, Konopleva MY, Lin CY, Young NL, Nakada D. AMP-activated protein kinase links acetyl-CoA homeostasis to BRD4 recruitment in acute myeloid leukemia. Blood. PMID 31697807 DOI: 10.1182/Blood.2019001076  0.817
2019 Hu T, Morita K, Hill MC, Jiang Y, Kitano A, Saito Y, Wang F, Mao X, Hoegenauer KA, Morishita K, Martin JF, Futreal PA, Takahashi K, Nakada D. PRDM16s transforms megakaryocyte-erythroid progenitors to acute myeloid leukemia-initiating cells. Blood. PMID 31270104 DOI: 10.1182/Blood.2018888255  0.845
2019 Hu T, Kitano A, Luu V, Dawson B, Hoegenauer KA, Lee BH, Nakada D. Bmi1 Suppresses Adipogenesis in the Hematopoietic Stem Cell Niche. Stem Cell Reports. PMID 31257132 DOI: 10.1016/J.Stemcr.2019.05.027  0.733
2019 Nakada D. Venetolax with Azacitidine Drains Fuel from AML Stem Cells. Cell Stem Cell. 24: 7-8. PMID 30609400 DOI: 10.1016/J.Stem.2018.12.005  0.45
2019 Shi X, Nakada D, Kitano A, Murdaugh R, Tseng Y, Hoegenauer K, Hu T, Jiang Y. Targeting NMNAT1 in Acute Myeloid Leukemia Blood. 134: 879-879. DOI: 10.1182/Blood-2019-132139  0.805
2019 Murdaugh R, Hoegenauer K, Shi X, Kitano A, Chapple R, Hu T, Tiessen J, Nakada D. Adult Hematopoietic Stem and Progenitor Cell Maintenance Requires Histone Variant H3.3 Regulation By Hira Blood. 134: 2473-2473. DOI: 10.1182/Blood-2019-131358  0.807
2019 Lin CY, Yi JS, Jiang Y, Nakada D, Perez M, Koren J, Eagle K. An Oncogenic Enhancer Encodes Selective Selenium Dependency in AML Blood. 134: 638-638. DOI: 10.1182/Blood-2019-129433  0.796
2019 Jiang Y, Shi X, Eagle K, Lin CY, Nakada D. Integrating Enhancer Profiling and CRISPR Dropout Screen Revealed Selenoprotein Synthesis Pathway As a New Vulnerability in AML Blood. 134: 639-639. DOI: 10.1182/Blood-2019-126904  0.834
2019 Tseng Y, Chapple R, Hu T, Rajapakshe K, Hoegenauer K, Coarfa C, Nakada D. Hematopoietic Hierarchy Under Steady-State and Stress Conditions Blood. 134: 1181-1181. DOI: 10.1182/Blood-2019-125110  0.82
2018 Chapple RH, Tseng YJ, Hu T, Kitano A, Takeichi M, Hoegenauer KA, Nakada D. Lineage tracing of murine adult hematopoietic stem cells reveals active contribution to steady-state hematopoiesis. Blood Advances. 2: 1220-1228. PMID 29848758 DOI: 10.1182/Bloodadvances.2018016295  0.792
2018 Shi X, Kitano A, Jiang Y, Luu V, Hoegenauer KA, Nakada D. Clonal expansion and myeloid leukemia progression modeled by multiplex gene editing of murine hematopoietic progenitor cells. Experimental Hematology. PMID 29751067 DOI: 10.1016/J.Exphem.2018.04.009  0.819
2018 Brunetti L, Gundry MC, Kitano A, Nakada D, Goodell MA. Highly Efficient Gene Disruption of Murine and Human Hematopoietic Progenitor Cells by CRISPR/Cas9. Journal of Visualized Experiments : Jove. PMID 29708546 DOI: 10.3791/57278  0.602
2018 Chapple RH, Hu T, Tseng YJ, Liu L, Kitano A, Luu V, Hoegenauer KA, Iwawaki T, Li Q, Nakada D. ERα promotes murine hematopoietic regeneration through the Ire1α-mediated unfolded protein response. Elife. 7. PMID 29451493 DOI: 10.7554/Elife.31159  0.802
2018 Chapple RH, Hu T, Tseng Y, Liu L, Kitano A, Luu V, Hoegenauer KA, Iwawaki T, Li Q, Nakada D. Author response: ERα promotes murine hematopoietic regeneration through the Ire1α-mediated unfolded protein response Elife. DOI: 10.7554/Elife.31159.023  0.769
2017 Hu T, Murdaugh R, Nakada D. Transcriptional and Microenvironmental Regulation of Lineage Ambiguity in Leukemia. Frontiers in Oncology. 7: 268. PMID 29164065 DOI: 10.3389/Fonc.2017.00268  0.838
2017 Jiang Y, Nakada D, Kitano A. AMPK Links Metabolic Regulation to Epigenome Modification in Leukemia-Initiating-Cell Blood. 130: 2488-2488. DOI: 10.1182/Blood.V130.Suppl_1.2488.2488  0.795
2016 Gundry MC, Brunetti L, Lin A, Mayle AE, Kitano A, Wagner D, Hsu JI, Hoegenauer KA, Rooney CM, Goodell MA, Nakada D. Highly Efficient Genome Editing of Murine and Human Hematopoietic Progenitor Cells by CRISPR/Cas9. Cell Reports. 17: 1453-1461. PMID 27783956 DOI: 10.1016/J.Celrep.2016.09.092  0.807
2016 Jiang Y, Nakada D. Cell intrinsic and extrinsic regulation of leukemia cell metabolism. International Journal of Hematology. 103: 607-16. PMID 26897135 DOI: 10.1007/S12185-016-1958-6  0.794
2016 Jiang Y, Nakada D, Kitano A, Chapple R, Hu T, Lin A. AMPK Protects Against Energy Stress and Maintains Histone Acetylation in Leukemia-Initiating-Cell Blood. 128: 2701-2701. DOI: 10.1182/Blood.V128.22.2701.2701  0.794
2016 Jiang Y, Nakada D. Cell intrinsic and extrinsic regulation of leukemia cell metabolism International Journal of Hematology. 1-10. DOI: 10.1007/s12185-016-1958-6  0.795
2015 Saito Y, Chapple RH, Lin A, Kitano A, Nakada D. AMPK Protects Leukemia-Initiating Cells in Myeloid Leukemias from Metabolic Stress in the Bone Marrow. Cell Stem Cell. PMID 26440282 DOI: 10.1016/J.Stem.2015.08.019  0.779
2015 Bednar F, Schofield HK, Collins MA, Yan W, Zhang Y, Shyam N, Eberle JA, Almada LL, Olive KP, Bardeesy N, Fernandez-Zapico ME, Nakada D, Simeone DM, Morrison SJ, Pasca di Magliano M. Bmi1 is required for the initiation of pancreatic cancer through an Ink4a-independent mechanism. Carcinogenesis. PMID 25939753 DOI: 10.1093/Carcin/Bgv058  0.542
2015 Schofield H, Bednar F, Collins M, Yan W, Zhang Y, Shyam N, Eberle J, Olive K, Bardeesy N, Nakada D, Simeone D, Morrison S, Magliano MPd. Abstract LB-061: Bmi1 is required for the initiation of pancreatic cancer through an Ink4a-independent mechanism Cancer Research. 75. DOI: 10.1158/1538-7445.Am2015-Lb-061  0.48
2015 Nakada D. Declined presentation AMPK protects acute myeloid leukemia-initiating cells residing in the bone marrow after metabolic stress Experimental Hematology. 43: S83. DOI: 10.1016/J.Exphem.2015.06.205  0.379
2014 Saito Y, Nakada D. The role of the Lkb1/AMPK pathway in hematopoietic stem cells and Leukemia. Critical Reviews in Oncogenesis. 19: 383-97. PMID 25404152 DOI: 10.1615/Critrevoncog.2014011765  0.713
2014 Mich JK, Signer RA, Nakada D, Pineda A, Burgess RJ, Vue TY, Johnson JE, Morrison SJ. Prospective identification of functionally distinct stem cells and neurosphere-initiating cells in adult mouse forebrain. Elife. 3: e02669. PMID 24843006 DOI: 10.7554/Elife.02669  0.83
2014 Nakada D, Oguro H, Levi BP, Ryan N, Kitano A, Saitoh Y, Takeichi M, Wendt GR, Morrison SJ. Oestrogen increases haematopoietic stem-cell self-renewal in females and during pregnancy. Nature. 505: 555-8. PMID 24451543 DOI: 10.1038/Nature12932  0.816
2014 Mich JK, Signer RA, Nakada D, Pineda A, Burgess RJ, Vue TY, Johnson JE, Morrison SJ. Author response: Prospective identification of functionally distinct stem cells and neurosphere-initiating cells in adult mouse forebrain Elife. DOI: 10.7554/Elife.02669.017  0.822
2013 Suzuki T, Bridges D, Nakada D, Skiniotis G, Morrison SJ, Lin JD, Saltiel AR, Inoki K. Inhibition of AMPK catabolic action by GSK3. Molecular Cell. 50: 407-19. PMID 23623684 DOI: 10.1016/J.Molcel.2013.03.022  0.508
2013 Bednar F, Collins MA, Yan W, Zhang Y, Nakada D, Simeone DM, Morrison SJ, Pasca di Magliano M. Bmi1 is required for murine pancreatic cancer initiation Journal of the American College of Surgeons. 217: S133. DOI: 10.1016/J.Jamcollsurg.2013.07.309  0.548
2012 Magee JA, Ikenoue T, Nakada D, Lee JY, Guan KL, Morrison SJ. Temporal changes in PTEN and mTORC2 regulation of hematopoietic stem cell self-renewal and leukemia suppression. Cell Stem Cell. 11: 415-28. PMID 22958933 DOI: 10.1016/J.Stem.2012.05.026  0.809
2012 Yamada T, Park CS, Burns A, Nakada D, Lacorazza HD. The cytosolic protein G0S2 maintains quiescence in hematopoietic stem cells. Plos One. 7: e38280. PMID 22693613 DOI: 10.1371/Journal.Pone.0038280  0.444
2012 Bednar F, Zhang Y, Nakada D, Simeone DM, Morrison SJ, Magliano MPd. Abstract B59: Bmi1 is required for murine pancreatic cancer initiation. Cancer Research. 72. DOI: 10.1158/1538-7445.Panca2012-B59  0.56
2011 Nakada D, Levi BP, Morrison SJ. Integrating physiological regulation with stem cell and tissue homeostasis. Neuron. 70: 703-18. PMID 21609826 DOI: 10.1016/J.Neuron.2011.05.011  0.802
2010 Nakada D, Saunders TL, Morrison SJ. Lkb1 regulates cell cycle and energy metabolism in haematopoietic stem cells. Nature. 468: 653-8. PMID 21124450 DOI: 10.1038/Nature09571  0.678
2010 Lee JY, Nakada D, Yilmaz OH, Tothova Z, Joseph NM, Lim MS, Gilliland DG, Morrison SJ. mTOR activation induces tumor suppressors that inhibit leukemogenesis and deplete hematopoietic stem cells after Pten deletion. Cell Stem Cell. 7: 593-605. PMID 21040901 DOI: 10.1016/J.Stem.2010.09.015  0.787
2009 He S, Nakada D, Morrison SJ. Mechanisms of stem cell self-renewal. Annual Review of Cell and Developmental Biology. 25: 377-406. PMID 19575646 DOI: 10.1146/Annurev.Cellbio.042308.113248  0.749
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