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Nicholas Keller - Publications

Affiliations: 
Physics University of California, San Diego, La Jolla, CA 
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17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Fizari M, Keller N, Jardine PJ, Smith DE. Role of DNA-DNA sliding friction and nonequilibrium dynamics in viral genome ejection and packaging. Nucleic Acids Research. PMID 37449417 DOI: 10.1093/nar/gkad582  0.71
2023 Fizari M, Keller N, Jardine PJ, Smith DE. Role of DNA-DNA sliding friction and non-equilibrium dynamics in viral genome ejection and packaging. Biorxiv : the Preprint Server For Biology. PMID 37066220 DOI: 10.1101/2023.04.03.535472  0.711
2020 Mo Y, Keller N, delToro D, Ananthaswamy N, Harvey SC, Rao VB, Smith DE. Function of a viral genome packaging motor from bacteriophage T4 is insensitive to DNA sequence. Nucleic Acids Research. PMID 33119757 DOI: 10.1093/nar/gkaa875  0.825
2020 Mo Y, Keller NA, Smith DE. High GC Content DNA does not Affect Phage T4 DNA Packaging -- Test of a Scrunchworm Model for Packaging Motor Function Biophysical Journal. 118: 188a. DOI: 10.1016/J.Bpj.2019.11.1144  0.742
2018 Keller N, delToro DJ, Smith DE. Single-Molecule Measurements of Motor-Driven Viral DNA Packaging in Bacteriophages Phi29, Lambda, and T4 with Optical Tweezers. Methods in Molecular Biology (Clifton, N.J.). 1805: 393-422. PMID 29971729 DOI: 10.1007/978-1-4939-8556-2_20  0.83
2017 Keller N, Berndsen ZT, Jardine PJ, Smith DE. Experimental comparison of forces resisting viral DNA packaging and driving DNA ejection. Physical Review. E. 95: 052408. PMID 28618627 DOI: 10.1103/Physreve.95.052408  0.82
2016 Keller N, Grimes S, Jardine PJ, Smith DE. Single DNA molecule jamming and history-dependent dynamics during motor-driven viral packaging. Nature Physics. 12: 757-761. PMID 27540410 DOI: 10.1038/Nphys3740  0.757
2016 delToro D, Ortiz D, Ordyan M, Sippy J, Oh CS, Keller N, Feiss M, Catalano CE, Smith D. Walker-A motif acts to coordinate ATP hydrolysis with motor output in viral DNA packaging. Journal of Molecular Biology. PMID 27139643 DOI: 10.1016/J.Jmb.2016.04.029  0.749
2016 Keller N, Grimes S, Jardine PJ, Smith DE. Single DNA molecule jamming and history-dependent dynamics during motor-driven viral packaging Nature Physics. DOI: 10.1038/nphys3740  0.705
2015 Berndsen ZT, Keller N, Smith DE. Continuous allosteric regulation of a viral packaging motor by a sensor that detects the density and conformation of packaged DNA. Biophysical Journal. 108: 315-24. PMID 25606680 DOI: 10.1016/J.Bpj.2014.11.3469  0.841
2014 Keller N, delToro D, Grimes S, Jardine PJ, Smith DE. Repulsive DNA-DNA interactions accelerate viral DNA packaging in phage Phi29. Physical Review Letters. 112: 248101. PMID 24996111 DOI: 10.1103/Physrevlett.112.248101  0.819
2014 Migliori AD, Keller N, Alam TI, Mahalingam M, Rao VB, Arya G, Smith DE. Evidence for an electrostatic mechanism of force generation by the bacteriophage T4 DNA packaging motor. Nature Communications. 5: 4173. PMID 24937091 DOI: 10.1038/Ncomms5173  0.806
2014 Berndsen ZT, Keller N, Grimes S, Jardine PJ, Smith DE. Nonequilibrium dynamics and ultraslow relaxation of confined DNA during viral packaging. Proceedings of the National Academy of Sciences of the United States of America. 111: 8345-50. PMID 24912187 DOI: 10.1073/Pnas.1405109111  0.849
2013 Berndsen ZT, Keller N, Smith DE. Evidence for non-equilibrium dynamics in viral DNA packaging from optical tweezers measurements Proceedings of Spie - the International Society For Optical Engineering. 8810. DOI: 10.1117/12.2027187  0.851
2013 Keller NA, Migliori AD, Arya G, Rao VB, Smith DE. Testing a structural model for viral DNA packaging motor function by optical tweezers measurements, site directed mutagenesis, and molecular dynamics calculations Proceedings of Spie - the International Society For Optical Engineering. 8810. DOI: 10.1117/12.2027158  0.82
2012 Keller N, Smith DE. Single molecule studies of the effect of spermidine on DNA mechanics and viral DNA packaging Proceedings of Spie - the International Society For Optical Engineering. 8458. DOI: 10.1016/J.Bpj.2011.11.1512  0.67
2012 Keller NA, Smith DE. Single Molecule Studies of the Effect of Spermidine on DNA Mechanics and Viral DNA Packaging Biophysical Journal. 102: 274a. DOI: 10.1016/j.bpj.2011.11.1512  0.678
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