80 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Aguillon-Rodriguez V, Angelaki D, Bayer H, Bonacchi N, Carandini M, Cazettes F, Chapuis G, Churchland AK, Dan Y, Dewitt E, Faulkner M, Forrest H, Haetzel L, Häusser M, ... ... Mainen ZF, et al. Standardized and reproducible measurement of decision-making in mice. Elife. 10. PMID 34011433 DOI: 10.7554/eLife.63711  1
2021 Urai AE, Aguillon-Rodriguez V, Laranjeira IC, Cazettes F, Mainen ZF, Churchland AK. Citric Acid Water as an Alternative to Water Restriction for High-Yield Mouse Behavior. Eneuro. PMID 33431508 DOI: 10.1523/ENEURO.0230-20.2020  0.72
2020 Cazettes F, Reato D, Morais JP, Renart A, Mainen ZF. Phasic Activation of Dorsal Raphe Serotonergic Neurons Increases Pupil Size. Current Biology : Cb. PMID 33186549 DOI: 10.1016/j.cub.2020.09.090  0.72
2020 Mendonça AG, Drugowitsch J, Vicente MI, DeWitt EEJ, Pouget A, Mainen ZF. The impact of learning on perceptual decisions and its implication for speed-accuracy tradeoffs. Nature Communications. 11: 2757. PMID 32488065 DOI: 10.1038/S41467-020-16196-7  1
2020 Vertechi P, Lottem E, Sarra D, Godinho B, Treves I, Quendera T, Oude Lohuis MN, Mainen ZF. Inference-Based Decisions in a Hidden State Foraging Task: Differential Contributions of Prefrontal Cortical Areas. Neuron. PMID 32048995 DOI: 10.1016/J.Neuron.2020.01.017  0.92
2019 Drugowitsch J, Mendonça AG, Mainen ZF, Pouget A. Learning optimal decisions with confidence. Proceedings of the National Academy of Sciences of the United States of America. PMID 31732671 DOI: 10.1073/Pnas.1906787116  1
2019 Pardo-Vazquez JL, Castiñeiras-de Saa JR, Valente M, Damião I, Costa T, Vicente MI, Mendonça AG, Mainen ZF, Renart A. The mechanistic foundation of Weber's law. Nature Neuroscience. PMID 31406366 DOI: 10.1038/S41593-019-0439-7  0.76
2019 Rigato J, Rennie SM, Mainen ZF. The overlooked ubiquity of first-person experience in the cognitive sciences Synthese. 1-37. DOI: 10.1007/S11229-019-02136-6  0.76
2018 Iigaya K, Fonseca MS, Murakami M, Mainen ZF, Dayan P. An effect of serotonergic stimulation on learning rates for rewards apparent after long intertrial intervals. Nature Communications. 9: 2477. PMID 29946069 DOI: 10.1038/S41467-018-04840-2  0.96
2018 Lottem E, Banerjee D, Vertechi P, Sarra D, Lohuis MO, Mainen ZF. Activation of serotonin neurons promotes active persistence in a probabilistic foraging task. Nature Communications. 9: 1000. PMID 29520000 DOI: 10.1038/S41467-018-03438-Y  0.92
2017 Correia PA, Matias S, Mainen ZF. Stereotaxic Adeno-associated Virus Injection and Cannula Implantation in the Dorsal Raphe Nucleus of Mice. Bio-Protocol. 7: e2549. PMID 29021994 DOI: 10.21769/BioProtoc.2549  0.72
2017 Murakami M, Shteingart H, Loewenstein Y, Mainen ZF. Distinct Sources of Deterministic and Stochastic Components of Action Timing Decisions in Rodent Frontal Cortex. Neuron. 94: 908-919.e7. PMID 28521140 DOI: 10.1016/j.neuron.2017.04.040  0.96
2017 Matias S, Lottem E, Dugué GP, Mainen ZF. Activity patterns of serotonin neurons underlying cognitive flexibility. Elife. 6. PMID 28322190 DOI: 10.7554/Elife.20552  0.92
2017 Correia PA, Lottem E, Banerjee D, Machado AS, Carey MR, Mainen ZF. Transient inhibition and long-term facilitation of locomotion by phasic optogenetic activation of serotonin neurons. Elife. 6. PMID 28193320 DOI: 10.7554/Elife.20975  0.92
2017 Matias S, Lottem E, Dugué GP, Mainen ZF. Author response: Activity patterns of serotonin neurons underlying cognitive flexibility Elife. DOI: 10.7554/Elife.20552.028  0.92
2016 Grabska-Barwińska A, Barthelmé S, Beck J, Mainen ZF, Pouget A, Latham PE. A probabilistic approach to demixing odors. Nature Neuroscience. PMID 27918530 DOI: 10.1038/nn.4444  1
2016 Mainen ZF, Häusser M, Pouget A. A better way to crack the brain. Nature. 539: 159-161. PMID 27830818 DOI: 10.1038/539159a  1
2016 Kobak D, Brendel W, Constantinidis C, Feierstein CE, Kepecs A, Mainen ZF, Romo R, Qi XL, Uchida N, Machens CK. Demixed principal component analysis of neural population data. Elife. 5. PMID 27067378 DOI: 10.7554/eLife.10989  1
2016 Gomez-Marin A, Mainen ZF. Expanding perspectives on cognition in humans, animals, and machines. Current Opinion in Neurobiology. 37: 85-91. PMID 26868042 DOI: 10.1016/j.conb.2016.01.011  1
2016 Lottem E, Lörincz ML, Mainen ZF. Optogenetic Activation of Dorsal Raphe Serotonin Neurons Rapidly Inhibits Spontaneous But Not Odor-Evoked Activity in Olfactory Cortex. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 36: 7-18. PMID 26740645 DOI: 10.1523/Jneurosci.3008-15.2016  1
2016 Correia PA, Lottem E, Banerjee D, Machado AS, Carey MR, Mainen ZF. Author response: Transient inhibition and long-term facilitation of locomotion by phasic optogenetic activation of serotonin neurons Elife. DOI: 10.7554/Elife.20975.016  0.92
2016 Kobak D, Brendel W, Constantinidis C, Feierstein CE, Kepecs A, Mainen ZF, Qi X, Romo R, Uchida N, Machens CK. Author response: Demixed principal component analysis of neural population data Elife. DOI: 10.7554/Elife.10989.022  1
2015 Meyniel F, Sigman M, Mainen ZF. Confidence as Bayesian Probability: From Neural Origins to Behavior. Neuron. 88: 78-92. PMID 26447574 DOI: 10.1016/j.neuron.2015.09.039  1
2015 Bush PC, Mainen ZF. Columnar architecture improves noise robustness in a model cortical network. Plos One. 10: e0119072. PMID 25781314 DOI: 10.1371/journal.pone.0119072  1
2015 Murakami M, Mainen ZF. Preparing and selecting actions with neural populations: toward cortical circuit mechanisms. Current Opinion in Neurobiology. 33: 40-46. PMID 25658753 DOI: 10.1016/j.conb.2015.01.005  0.96
2015 Fonseca MS, Murakami M, Mainen ZF. Activation of dorsal raphe serotonergic neurons promotes waiting but is not reinforcing. Current Biology : Cb. 25: 306-15. PMID 25601545 DOI: 10.1016/J.Cub.2014.12.002  1
2014 Rigato J, Murakami M, Mainen Z. Spontaneous Decisions and Free Will: Empirical Results and Philosophical Considerations. Cold Spring Harbor Symposia On Quantitative Biology. 79: 177-84. PMID 25746063 DOI: 10.1101/sqb.2014.79.024810  1
2014 Gomez-Marin A, Paton JJ, Kampff AR, Costa RM, Mainen ZF. Big behavioral data: psychology, ethology and the foundations of neuroscience. Nature Neuroscience. 17: 1455-62. PMID 25349912 DOI: 10.1038/Nn.3812  1
2014 Murakami M, Vicente MI, Costa GM, Mainen ZF. Neural antecedents of self-initiated actions in secondary motor cortex. Nature Neuroscience. 17: 1574-82. PMID 25262496 DOI: 10.1038/nn.3826  1
2014 Lak A, Costa GM, Romberg E, Koulakov AA, Mainen ZF, Kepecs A. Orbitofrontal cortex is required for optimal waiting based on decision confidence. Neuron. 84: 190-201. PMID 25242219 DOI: 10.1016/J.Neuron.2014.08.039  1
2014 Dugué GP, Lörincz ML, Lottem E, Audero E, Matias S, Correia PA, Léna C, Mainen ZF. Optogenetic recruitment of dorsal raphe serotonergic neurons acutely decreases mechanosensory responsivity in behaving mice. Plos One. 9: e105941. PMID 25148042 DOI: 10.1371/Journal.Pone.0105941  1
2014 Mainen ZF, Pouget A. European Commission: Put brain project back on course. Nature. 511: 534. PMID 25079543 DOI: 10.1038/511534b  1
2014 Tecuapetla F, Matias S, Dugue GP, Mainen ZF, Costa RM. Balanced activity in basal ganglia projection pathways is critical for contraversive movements. Nature Communications. 5: 4315. PMID 25002180 DOI: 10.1038/Ncomms5315  1
2013 Rennie SM, Moita MM, Mainen ZF. Social cognition in the rodent: nothing to be sniffed at. Trends in Cognitive Sciences. 17: 306-7. PMID 23664453 DOI: 10.1016/j.tics.2013.04.011  1
2013 Zariwala HA, Kepecs A, Uchida N, Hirokawa J, Mainen ZF. The limits of deliberation in a perceptual decision task. Neuron. 78: 339-51. PMID 23541901 DOI: 10.1016/j.neuron.2013.02.010  1
2013 Kepecs A, Mainen ZF. A computational framework for the study of confidence across species The Cognitive Neuroscience of Metacognition. 115-145. DOI: 10.1007/978-3-642-45190-4_6  1
2012 Miura K, Mainen ZF, Uchida N. Odor representations in olfactory cortex: distributed rate coding and decorrelated population activity. Neuron. 74: 1087-98. PMID 22726838 DOI: 10.1016/j.neuron.2012.04.021  1
2012 Felsen G, Mainen ZF. Midbrain contributions to sensorimotor decision making. Journal of Neurophysiology. 108: 135-47. PMID 22496524 DOI: 10.1152/jn.01181.2011  1
2012 Kepecs A, Mainen ZF. A computational framework for the study of confidence in humans and animals. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 367: 1322-37. PMID 22492750 DOI: 10.1098/rstb.2012.0037  1
2012 Mainen ZF, Abbott LF. Functional plasticity at dendritic synapses Dendrites. DOI: 10.1093/acprof:oso/9780198566564.003.0018  1
2011 Vicente MI, Mainen ZF. Convergence in the piriform cortex. Neuron. 70: 1-2. PMID 21482349 DOI: 10.1016/j.neuron.2011.03.019  1
2010 Feierstein CE, Mainen ZF. Listening to the crowd: neuronal ensembles rule. Neuron. 66: 334-6. PMID 20471347 DOI: 10.1016/j.neuron.2010.04.042  1
2009 Quirk MC, Sosulski DL, Feierstein CE, Uchida N, Mainen ZF. A defined network of fast-spiking interneurons in orbitofrontal cortex: responses to behavioral contingencies and ketamine administration. Frontiers in Systems Neuroscience. 3: 13. PMID 20057934 DOI: 10.3389/neuro.06.013.2009  1
2009 Ranade SP, Mainen ZF. Transient firing of dorsal raphe neurons encodes diverse and specific sensory, motor, and reward events. Journal of Neurophysiology. 102: 3026-37. PMID 19710375 DOI: 10.1152/jn.00507.2009  1
2009 Dugué GP, Mainen ZF. How serotonin gates olfactory information flow. Nature Neuroscience. 12: 673-5. PMID 19471262 DOI: 10.1038/Nn0609-673  1
2009 Mainen ZF, Kepecs A. Neural representation of behavioral outcomes in the orbitofrontal cortex. Current Opinion in Neurobiology. 19: 84-91. PMID 19427193 DOI: 10.1016/j.conb.2009.03.010  1
2008 Vicente MI, Mainen ZF. Towards an image of a memory trace. Frontiers in Neuroscience. 2: 131-2. PMID 19225580 DOI: 10.3389/neuro.01.041.2008  0.72
2008 Felsen G, Mainen ZF. Neural substrates of sensory-guided locomotor decisions in the rat superior colliculus. Neuron. 60: 137-48. PMID 18940594 DOI: 10.1016/j.neuron.2008.09.019  1
2008 Kepecs A, Uchida N, Zariwala HA, Mainen ZF. Neural correlates, computation and behavioural impact of decision confidence. Nature. 455: 227-31. PMID 18690210 DOI: 10.1038/Nature07200  1
2008 Huber D, Petreanu L, Ghitani N, Ranade S, Hromádka T, Mainen Z, Svoboda K. Sparse optical microstimulation in barrel cortex drives learned behaviour in freely moving mice. Nature. 451: 61-4. PMID 18094685 DOI: 10.1038/Nature06445  1
2008 Kim D, Stanaćević M, Kamoua R, Mainen Z. A low-power low-data-rate neural recording system with adaptive spike detection Midwest Symposium On Circuits and Systems. 822-825. DOI: 10.1109/MWSCAS.2008.4616926  1
2007 Uchida N, Mainen ZF. Odor concentration invariance by chemical ratio coding. Frontiers in Systems Neuroscience. 1: 3. PMID 18958244 DOI: 10.3389/neuro.06.003.2007  1
2007 Mainen ZF. The main olfactory bulb and innate behavior: different perspectives on an olfactory scene. Nature Neuroscience. 10: 1511-2. PMID 18043586 DOI: 10.1038/nn1207-1511  1
2007 Yun X, Kim D, Stanaćević M, Mainen Z. Low-power high-resolution 32-channel neural recording system. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2007: 2373-6. PMID 18002470 DOI: 10.1109/IEMBS.2007.4352804  1
2007 Sato TR, Gray NW, Mainen ZF, Svoboda K. The functional microarchitecture of the mouse barrel cortex. Plos Biology. 5: e189. PMID 17622195 DOI: 10.1371/journal.pbio.0050189  1
2007 Kepecs A, Uchida N, Mainen ZF. Rapid and precise control of sniffing during olfactory discrimination in rats. Journal of Neurophysiology. 98: 205-13. PMID 17460109 DOI: 10.1152/jn.00071.2007  1
2007 Gurden H, L'Heureux B, Pain F, Guillermier M, Pinot L, Lefebvre F, Dubois A, Delzescaux T, Mastrippolito R, Hantraye P, Bonvento G, Mainen Z, Laniece P. Central role of astrocytic glutamate uptake activity in odor-evoked functional signals in olfactory glomeruli Journal of Cerebral Blood Flow and Metabolism. 27: BO13-08.  1
2006 Gurden H, Uchida N, Mainen ZF. Sensory-evoked intrinsic optical signals in the olfactory bulb are coupled to glutamate release and uptake. Neuron. 52: 335-45. PMID 17046695 DOI: 10.1016/j.neuron.2006.07.022  1
2006 Feierstein CE, Quirk MC, Uchida N, Sosulski DL, Mainen ZF. Representation of spatial goals in rat orbitofrontal cortex. Neuron. 51: 495-507. PMID 16908414 DOI: 10.1016/j.neuron.2006.06.032  1
2006 Mainen ZF. Behavioral analysis of olfactory coding and computation in rodents. Current Opinion in Neurobiology. 16: 429-34. PMID 16822662 DOI: 10.1016/j.conb.2006.06.003  1
2006 Wilson RI, Mainen ZF. Early events in olfactory processing. Annual Review of Neuroscience. 29: 163-201. PMID 16776583 DOI: 10.1146/annurev.neuro.29.051605.112950  1
2006 Uchida N, Kepecs A, Mainen ZF. Seeing at a glance, smelling in a whiff: rapid forms of perceptual decision making. Nature Reviews. Neuroscience. 7: 485-91. PMID 16715056 DOI: 10.1038/nrn1933  1
2006 Kepecs A, Uchida N, Mainen ZF. The sniff as a unit of olfactory processing. Chemical Senses. 31: 167-79. PMID 16339265 DOI: 10.1093/chemse/bjj016  1
2005 Egger V, Svoboda K, Mainen ZF. Dendrodendritic synaptic signals in olfactory bulb granule cells: local spine boost and global low-threshold spike. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 25: 3521-30. PMID 15814782 DOI: 10.1523/Jneurosci.4746-04.2005  1
2003 Uchida N, Mainen ZF. Speed and accuracy of olfactory discrimination in the rat. Nature Neuroscience. 6: 1224-9. PMID 14566341 DOI: 10.1038/nn1142  1
2003 Egger V, Svoboda K, Mainen ZF. Mechanisms of lateral inhibition in the olfactory bulb: efficiency and modulation of spike-evoked calcium influx into granule cells. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 23: 7551-8. PMID 12930793 DOI: 10.1523/Jneurosci.23-20-07551.2003  1
2000 Malinow R, Mainen ZF, Hayashi Y. LTP mechanisms: from silence to four-lane traffic. Current Opinion in Neurobiology. 10: 352-7. PMID 10851179 DOI: 10.1016/S0959-4388(00)00099-4  1
2000 Maravall M, Mainen ZF, Sabatini BL, Svoboda K. Estimating intracellular calcium concentrations and buffering without wavelength ratioing. Biophysical Journal. 78: 2655-67. PMID 10777761 DOI: 10.1016/S0006-3495(00)76809-3  1
1999 Mainen ZF, Maletic-Savatic M, Shi SH, Hayashi Y, Malinow R, Svoboda K. Two-photon imaging in living brain slices. Methods (San Diego, Calif.). 18: 231-9, 181. PMID 10356355 DOI: 10.1006/meth.1999.0776  1
1999 Mainen ZF, Malinow R, Svoboda K. Synaptic calcium transients in single spines indicate that NMDA receptors are not saturated. Nature. 399: 151-5. PMID 10335844 DOI: 10.1038/20187  1
1999 Svoboda K, Mainen ZF. Synaptic [Ca2+]: intracellular stores spill their guts. Neuron. 22: 427-30. PMID 10197523 DOI: 10.1016/S0896-6273(00)80698-4  1
1999 Svoboda K, Burbach BJ, Lendvai B, Mainen ZF, Maravall M, Nimchinsky E, O’Brien P, Sabatini B, Stern E. 2-Photon Excitation Laser Scanning Microscopy for High Resolution Imaging In Scattering Biological Tissues: Applications to Neuroscience Microscopy and Microanalysis. 5: 1058-1059. DOI: 10.1017/S1431927600018614  1
1999 Maravall M, Mainen ZF, Svoboda K. Dendritic [ca2+] dynamics in the presence of immobile buffers and of dyes Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 1606: 43-52. DOI: 10.1007/BFb0098159  1
1998 Mainen ZF, Jia Z, Roder J, Malinow R. Use-dependent AMPA receptor block in mice lacking GluR2 suggests postsynaptic site for LTP expression. Nature Neuroscience. 1: 579-86. PMID 10196565 DOI: 10.1038/2812  1
1996 Mainen ZF, Carnevale NT, Zador AM, Claiborne BJ, Brown TH. Electrotonic architecture of hippocampal CA1 pyramidal neurons based on three-dimensional reconstructions. Journal of Neurophysiology. 76: 1904-23. PMID 8890303 DOI: 10.1152/Jn.1996.76.3.1904  1
1996 Mainen ZF, Sejnowski TJ. Influence of dendritic structure on firing pattern in model neocortical neurons. Nature. 382: 363-6. PMID 8684467 DOI: 10.1038/382363a0  1
1996 Malinow R, Mainen ZF. Long-term potentiation in the CA1 hippocampus. Science (New York, N.Y.). 271: 1604-6. PMID 8599121 DOI: 10.1126/science.271.5255.1604  1
1995 Mainen ZF, Joerges J, Huguenard JR, Sejnowski TJ. A model of spike initiation in neocortical pyramidal neurons. Neuron. 15: 1427-39. PMID 8845165 DOI: 10.1016/0896-6273(95)90020-9  1
1995 Mainen ZF, Sejnowski TJ. Reliability of spike timing in neocortical neurons. Science (New York, N.Y.). 268: 1503-6. PMID 7770778 DOI: 10.1126/Science.7770778  1
1994 Destexhe A, Mainen ZF, Sejnowski TJ. Synthesis of models for excitable membranes, synaptic transmission and neuromodulation using a common kinetic formalism. Journal of Computational Neuroscience. 1: 195-230. PMID 8792231 DOI: 10.1007/Bf00961734  1
Show low-probability matches.