Mary T. Rodgers - Publications

Affiliations: 
1992 California Institute of Technology, Pasadena, CA 

139 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Hamlow L, Nei Y, Wu R, Gao J, Steill J, Berden G, Oomens J, Rodgers M. Influence of the local environment on the intrinsic structures of gas-phase cytidine-5′-monophosphates International Journal of Mass Spectrometry. 447: 116234. DOI: 10.1016/J.Ijms.2019.116234  0.43
2019 He CC, Hamlow LA, Zhu Y, Nei YW, Fan L, McNary CP, Maître P, Steinmetz V, Schindler B, Compagnon I, Armentrout PB, Rodgers MT. Structural and Energetic Effects of O2'-Ribose Methylation of Protonated Pyrimidine Nucleosides. Journal of the American Society For Mass Spectrometry. PMID 31435890 DOI: 10.1007/S13361-019-02300-9  0.775
2019 Kimutai B, He CC, Roberts A, Jones ML, Bao X, Jiang J, Yang Z, Rodgers MT, Chow CS. Amino acid-linked platinum(II) compounds: non-canonical nucleoside preferences and influence on glycosidic bond stabilities. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. PMID 31359185 DOI: 10.1007/S00775-019-01693-Y  0.324
2019 Hamlow LA, Nei YW, Wu RR, Gao J, Steill JD, Berden G, Oomens J, Rodgers MT. Impact of Sodium Cationization on Gas-Phase Conformations of DNA and RNA Cytidine Mononucleotides. Journal of the American Society For Mass Spectrometry. PMID 31286444 DOI: 10.1007/S13361-019-02274-8  0.444
2019 McNary CP, Nei YW, Maitre P, Rodgers MT, Armentrout PB. Infrared multiple photon dissociation action spectroscopy of protonated glycine, histidine, lysine, and arginine complexed with 18-crown-6 ether. Physical Chemistry Chemical Physics : Pccp. PMID 31155616 DOI: 10.1039/C9Cp02265A  0.805
2019 Devereaux ZJ, He CC, Zhu Y, Roy HA, Cunningham NA, Hamlow LA, Berden G, Oomens J, Rodgers MT. Structures and Relative Glycosidic Bond Stabilities of Protonated 2'-Fluoro-Substituted Purine Nucleosides. Journal of the American Society For Mass Spectrometry. PMID 31111413 DOI: 10.1007/S13361-019-02222-6  0.433
2019 Hamlow LA, Devereaux ZJ, Roy HA, Cunningham NA, Berden G, Oomens J, Rodgers MT. Impact of the 2'- and 3'-Sugar Hydroxyl Moieties on Gas-Phase Nucleoside Structure. Journal of the American Society For Mass Spectrometry. PMID 30850972 DOI: 10.1007/S13361-019-02155-0  0.432
2019 Armentrout PB, Baer T, Beauchamp JJL, Oomens J, Rodgers MT, Ryzhov V. Robert C. Dunbar (1943-2017). European Journal of Mass Spectrometry (Chichester, England). 25: 4-7. PMID 30773920 DOI: 10.1177/1469066718817619  0.618
2019 Clark AA, Yang B, Rodgers MT, Armentrout PB. Experimental and Computational Study of the Group 1 Metal Cation Chelates with Lysine: Bond Dissociation Energies, Structures, and Structural Trends. The Journal of Physical Chemistry. B. PMID 30698972 DOI: 10.1021/Acs.Jpcb.8B11967  0.694
2019 Devereaux ZJ, Roy H, He C, Zhu Y, Cunningham N, Hamlow L, Berden G, Oomens J, Rodgers M. Influence of 2′-fluoro modification on glycosidic bond stabilities and gas-phase ion structures of protonated pyrimidine nucleosides Journal of Fluorine Chemistry. 219: 10-22. DOI: 10.1016/J.Jfluchem.2018.12.004  0.45
2019 Polfer NC, Rodgers MT. Toward analytical applications of ion spectroscopy: Experiment and Theory International Journal of Mass Spectrometry. 445: 116210. DOI: 10.1016/J.Ijms.2019.116210  0.363
2019 Soley EO, Devereaux ZJ, Hamlow L, Berden G, Oomens J, Rodgers M. IRMPD action spectroscopy, ER-CID experiments, and theoretical approaches investigate intrinsic L-thymidine properties compared to D-thymidine: Findings support robust methodology International Journal of Mass Spectrometry. 441: 32-43. DOI: 10.1016/J.Ijms.2019.04.003  0.398
2019 Hamlow L, He C, Devereaux ZJ, Roy H, Cunningham N, Soley EO, Berden G, Oomens J, Rodgers M. Gas-phase structures of protonated arabino nucleosides International Journal of Mass Spectrometry. 438: 124-134. DOI: 10.1016/J.Ijms.2019.01.005  0.401
2018 He C, Hamlow LA, Devereaux ZJ, Zhu Y, Nei YW, Fan L, McNary CP, Maitre P, Steinmetz V, Schindler B, Compagnon I, Armentrout PB, Rodgers MT. Structural and Energetic Effects of 2'-Ribose Methylation of Protonated Purine Nucleosides. The Journal of Physical Chemistry. B. PMID 30203656 DOI: 10.1021/Acs.Jpcb.8B07687  0.781
2018 Devereaux ZJ, Zhu Y, Rodgers MT. Relative glycosidic bond stabilities of naturally occurring methylguanosines: 7-methylation is intrinsically activating. European Journal of Mass Spectrometry (Chichester, England). 1469066718798097. PMID 30189754 DOI: 10.1177/1469066718798097  0.457
2018 Boles GC, Wu RR, Rodgers MT, Armentrout PB. Protonated Asparaginyl-Alanine Decomposition: a TCID, SORI-CID, and Computational Analysis. Journal of the American Society For Mass Spectrometry. PMID 30159675 DOI: 10.1007/S13361-018-2052-5  0.824
2018 Hamlow LA, Zhu Y, Devereaux ZJ, Cunningham NA, Berden G, Oomens J, Rodgers MT. Modified Quadrupole Ion Trap Mass Spectrometer for Infrared Ion Spectroscopy: Application to Protonated Thiated Uridines. Journal of the American Society For Mass Spectrometry. PMID 30136214 DOI: 10.1007/S13361-018-2047-2  0.464
2018 Zhu Y, Hamlow L, He C, Roy H, Cunningham N, Munshi M, Berden G, Oomens J, Rodgers M. Conformations and N-glycosidic bond stabilities of sodium cationized 2′-deoxycytidine and cytidine: Solution conformation of [Cyd + Na]+ is preserved upon ESI International Journal of Mass Spectrometry. 429: 18-27. DOI: 10.1016/J.Ijms.2017.04.005  0.495
2017 Wu RR, Hamlow LA, He CC, Nei YW, Berden G, Oomens J, Rodgers MT. The intrinsic basicity of the phosphate backbone exceeds that of uracil and thymine residues: protonation of the phosphate moiety is preferred over the nucleobase for pdThd and pUrd. Physical Chemistry Chemical Physics : Pccp. PMID 29099122 DOI: 10.1039/C7Cp05521H  0.408
2017 Zhu Y, Yang Z, Rodgers MT. Influence of Linkage Stereochemistry and Protecting Groups on Glycosidic Bond Stability of Sodium Cationized Glycosyl Phosphates. Journal of the American Society For Mass Spectrometry. PMID 28924832 DOI: 10.1007/S13361-017-1780-2  0.409
2017 Akinyemi TE, Wu RR, Nei YW, Cunningham NA, Roy HA, Steill JD, Berden G, Oomens J, Rodgers MT. Influence of Transition Metal Cationization versus Sodium Cationization and Protonation on the Gas-Phase Tautomeric Conformations and Stability of Uracil: Application to [Ura+Cu](+) and [Ura+Ag](). Journal of the American Society For Mass Spectrometry. PMID 28895083 DOI: 10.1007/S13361-017-1771-3  0.394
2017 Zhu Y, Roy HA, Cunningham NA, Strobehn SF, Gao J, Munshi MU, Berden G, Oomens J, Rodgers MT. IRMPD Action Spectroscopy, ER-CID Experiments, and Theoretical Studies of Sodium Cationized Thymidine and 5-Methyluridine: Kinetic Trapping During the ESI Desolvation Process Preserves the Solution Structure of [Thd+Na](). Journal of the American Society For Mass Spectrometry. PMID 28836109 DOI: 10.1007/S13361-017-1753-5  0.472
2017 Zhu Y, Roy HA, Cunningham NA, Strobehn SF, Gao J, Munshi MU, Berden G, Oomens J, Rodgers MT. Effects of sodium cationization versus protonation on the conformations and N-glycosidic bond stabilities of sodium cationized Urd and dUrd: solution conformation of [Urd+Na](+) is preserved upon ESI. Physical Chemistry Chemical Physics : Pccp. PMID 28665436 DOI: 10.1039/C7Cp02377D  0.431
2017 Wu RR, Hamlow LA, He CC, Nei YW, Berden G, Oomens J, Rodgers MT. N3 and O2 Protonated Conformers of the Cytosine Mononucleotides Coexist in the Gas Phase. Journal of the American Society For Mass Spectrometry. PMID 28497356 DOI: 10.1007/S13361-017-1653-8  0.439
2017 Zhu Y, Hamlow LA, He C, Lee JK, Gao J, Berden G, Oomens J, Rodgers MT. Gas-Phase Conformations and N-Glycosidic Bond Stabilities of Sodium Cationized 2'-Deoxyguanosine and Guanosine: Sodium Cations Preferentially Bind to the Guanine Residue. The Journal of Physical Chemistry. B. PMID 28355483 DOI: 10.1021/Acs.Jpcb.7B02906  0.485
2016 Wu RR, Rodgers MT. Tautomerization lowers the activation barriers for N-glycosidic bond cleavage of protonated uridine and 2'-deoxyuridine. Physical Chemistry Chemical Physics : Pccp. PMID 27536972 DOI: 10.1039/C6Cp03620A  0.483
2016 Zhu Y, Hamlow LA, He C, Strobehn SF, Lee JK, Gao J, Berden G, Oomens J, Rodgers MT. Influence of Sodium Cationization versus Protonation on the Gas-Phase Conformations and Glycosidic Bond Stabilities of 2'-Deoxyadenosine and Adenosine. The Journal of Physical Chemistry. B. PMID 27494378 DOI: 10.1021/Acs.Jpcb.6B06105  0.497
2016 Boles GC, Wu R, Rodgers MT, Armentrout PB. Thermodynamics and Mechanisms of Protonated Asparaginyl-Glycine Decomposition. The Journal of Physical Chemistry. B. PMID 27322599 DOI: 10.1021/Acs.Jpcb.6B03253  0.821
2016 Wu RR, Rodgers MT. Mechanisms and energetics for N-glycosidic bond cleavage of protonated adenine nucleosides: N3 protonation induces base rotation and enhances N-glycosidic bond stability. Physical Chemistry Chemical Physics : Pccp. PMID 27240654 DOI: 10.1039/C6Cp01445C  0.45
2016 Wu RR, He CC, Hamlow LA, Nei YW, Berden G, Oomens J, Rodgers MT. Protonation induces base rotation of purine nucleotides pdGuo and pGuo. Physical Chemistry Chemical Physics : Pccp. PMID 27197049 DOI: 10.1039/C6Cp01354F  0.417
2016 Wu R, Rodgers MT. O2 Protonation Controls Threshold Behavior for N-Glycosidic Bond Cleavage of Protonated Cytosine Nucleosides. The Journal of Physical Chemistry. B. PMID 27159774 DOI: 10.1021/Acs.Jpcb.6B04388  0.486
2016 Wu R, He C, Hamlow L, Nei YW, Berden G, Oomens J, Rodgers MT. N3 Protonation Induces Base Rotation of 2'-Deoxyadenosine-5'-Monophosphate and Adenosine-5'-Monophosphate. The Journal of Physical Chemistry. B. PMID 27138137 DOI: 10.1021/Acs.Jpcb.6B04052  0.442
2016 Rodgers MT, Armentrout PB. Cationic Noncovalent Interactions: Energetics and Periodic Trends. Chemical Reviews. 116: 5642-87. PMID 26953819 DOI: 10.1021/Acs.Chemrev.5B00688  0.674
2016 Gao J, Berden G, Rodgers MT, Oomens J. Interaction of Cu(+) with cytosine and formation of i-motif-like C-M(+)-C complexes: alkali versus coinage metals. Physical Chemistry Chemical Physics : Pccp. PMID 26894838 DOI: 10.1039/C6Cp00234J  0.441
2016 Rodgers MT, Armentrout PB. Discriminating Properties of Alkali Metal Ions Towards the Constituents of Proteins and Nucleic Acids. Conclusions from Gas-Phase and Theoretical Studies. Metal Ions in Life Sciences. 16: 103-31. PMID 26860300 DOI: 10.1007/978-3-319-21756-7_4  0.64
2016 Wu RR, Chen Y, Rodgers MT. Mechanisms and energetics for N-glycosidic bond cleavage of protonated 2'-deoxyguanosine and guanosine. Physical Chemistry Chemical Physics : Pccp. PMID 26740232 DOI: 10.1039/C5Cp05738H  0.44
2016 Rodgers MT, Armentrout PB. Cationic Noncovalent Interactions: Energetics and Periodic Trends Chemical Reviews. 116: 5642-5687. DOI: 10.1021/acs.chemrev.5b00688  0.642
2016 Rodgers MT, Armentrout PB. ChemInform Abstract: Cationic Noncovalent Interactions: Energetics and Periodic Trends Cheminform. 47. DOI: 10.1002/chin.201627275  0.535
2015 Wu RR, Yang B, Frieler CE, Berden G, Oomens J, Rodgers MT. 2,4-Dihydroxy and O2 Protonated Tautomers of dThd and Thd Coexist in the Gas Phase: Methylation Alters Protonation Preferences versus dUrd and Urd. Journal of the American Society For Mass Spectrometry. PMID 26676730 DOI: 10.1007/S13361-015-1303-Y  0.417
2015 He C, Kimutai B, Bao X, Hamlow L, Zhu Y, Strobehn SF, Gao J, Berden G, Oomens J, Chow CS, Rodgers MT. Evaluation of Hybrid Theoretical Approaches for Structural Determination of a Glycine-Linked Cisplatin Derivative via IRMPD Action Spectroscopy. The Journal of Physical Chemistry. A. PMID 26473433 DOI: 10.1021/Acs.Jpca.5B08181  0.365
2015 Wu RR, Yang B, Frieler CE, Berden G, Oomens J, Rodgers MT. Diverse mixtures of 2,4-dihydroxy tautomers and O4 protonated conformers of uridine and 2'-deoxyuridine coexist in the gas phase. Physical Chemistry Chemical Physics : Pccp. 17: 25978-88. PMID 26225730 DOI: 10.1039/C5Cp02227D  0.398
2015 Yang B, Wu RR, Rodgers MT. Base-Pairing Energies of Proton-Bound Dimers and Proton Affinities of 1-Methyl-5-Halocytosines: Implications for the Effects of Halogenation on the Stability of the DNA i-Motif. Journal of the American Society For Mass Spectrometry. 26: 1469-82. PMID 26148525 DOI: 10.1007/S13361-015-1174-2  0.393
2015 Yang B, Rodgers MT. Base-Pairing Energies of Protonated Nucleoside Base Pairs of dCyd and m(5)dCyd: Implications for the Stability of DNA i-Motif Conformations. Journal of the American Society For Mass Spectrometry. 26: 1394-403. PMID 26002790 DOI: 10.1007/S13361-015-1144-8  0.406
2015 Wu RR, Yang B, Frieler CE, Berden G, Oomens J, Rodgers MT. N3 and O2 protonated tautomeric conformations of 2'-deoxycytidine and cytidine coexist in the gas phase. The Journal of Physical Chemistry. B. 119: 5773-84. PMID 25874502 DOI: 10.1021/Jp5130316  0.404
2015 Wang R, Yang B, Wu RR, Rodgers MT, Schäfer M, Armentrout PB. Guided ion beam and computational studies of the decomposition of a model thiourea protein cross-linker. The Journal of Physical Chemistry. B. 119: 3727-42. PMID 25660315 DOI: 10.1021/Jp512997Z  0.706
2015 Wu RR, Yang B, Berden G, Oomens J, Rodgers MT. Gas-phase conformations and energetics of protonated 2'-deoxyadenosine and adenosine: IRMPD action spectroscopy and theoretical studies. The Journal of Physical Chemistry. B. 119: 2795-805. PMID 25622282 DOI: 10.1021/Jp509267K  0.44
2015 Yang B, Moehlig AR, Frieler CE, Rodgers MT. Base-pairing energies of protonated nucleobase pairs and proton affinities of 1-methylated cytosines: model systems for the effects of the sugar moiety on the stability of DNA i-motif conformations. The Journal of Physical Chemistry. B. 119: 1857-68. PMID 25565341 DOI: 10.1021/Acs.Jpcb.5B00035  0.377
2015 Austin CA, Rodgers MT. Intrinsic affinities of alkali metal cations for diaza-18-crown-6: Effects of alkali metal cation size and donor atoms on the binding energies International Journal of Mass Spectrometry. 377: 64-72. DOI: 10.1016/J.Ijms.2014.06.033  0.522
2014 Wu RR, Yang B, Berden G, Oomens J, Rodgers MT. Gas-Phase Conformations and Energetics of Protonated 2'-Deoxyguanosine and Guanosine: IRMPD Action Spectroscopy and Theoretical Studies. The Journal of Physical Chemistry. B. PMID 25423364 DOI: 10.1021/jp508019a  0.313
2014 Austin CA, Rodgers MT. Alkali metal cation-hexacyclen complexes: effects of alkali metal cation size on the structure and binding energy. The Journal of Physical Chemistry. A. 118: 5488-500. PMID 24977648 DOI: 10.1021/Jp502275Q  0.464
2014 Yang B, Rodgers MT. Alkali metal cation binding affinities of cytosine in the gas phase: Revisited Physical Chemistry Chemical Physics. 16: 16110-16120. PMID 24967574 DOI: 10.1039/C4Cp01128G  0.511
2014 Nose H, Rodgers MT. Influence of the d orbital occupation on the structures and sequential binding energies of pyridine to the late first-row divalent transition metal cations: a DFT study. The Journal of Physical Chemistry. A. 118: 8129-40. PMID 24786545 DOI: 10.1021/Jp500488T  0.406
2014 Armentrout PB, Austin CA, Rodgers MT. Alkali metal cation interactions with 15-crown-5 in the gas phase: revisited. The Journal of Physical Chemistry. A. 118: 8088-97. PMID 24559535 DOI: 10.1021/Jp4116172  0.7
2014 Armentrout PB, Yang B, Rodgers MT. Metal cation dependence of interactions with amino acids: bond dissociation energies of Rb(+) and Cs(+) to the acidic amino acids and their amide derivatives. The Journal of Physical Chemistry. B. 118: 4300-14. PMID 24528155 DOI: 10.1021/Jp5001754  0.697
2014 Yang B, Rodgers MT. Base-pairing energies of proton-bound heterodimers of cytosine and modified cytosines: Implications for the stability of DNA i-motif conformations Journal of the American Chemical Society. 136: 282-290. PMID 24320604 DOI: 10.1021/Ja409515V  0.421
2014 Kaczan CM, Rathur AI, Wu RR, Chen Y, Austin CA, Berden G, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy of sodium cationized halouracils: Effects of sodium cationization and halogenation on gas-phase conformation International Journal of Mass Spectrometry. DOI: 10.1016/J.Ijms.2014.07.016  0.514
2013 Nose H, Rodgers MT. Energy-Resolved Collision-Induced Dissociation Studies of 2,2'-Bipyridine Complexes of the Late First-Row Divalent Transition-Metal Cations: Determination of the Third-Sequential Binding Energies. Chempluschem. 78: 1109-1123. PMID 31986729 DOI: 10.1002/Cplu.201300156  0.473
2013 Armentrout PB, Rodgers MT. Thermochemistry of non-covalent ion-molecule interactions. Mass Spectrometry (Tokyo, Japan). 2: S0005. PMID 24349924 DOI: 10.5702/Massspectrometry.S0005  0.699
2013 Yang B, Wu RR, Berden G, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy of proton-bound dimers of cytosine and modified cytosines: Effects of modifications on gas-phase conformations Journal of Physical Chemistry B. 117: 14191-14201. PMID 24151932 DOI: 10.1021/Jp405105W  0.449
2013 Yang B, Wu RR, Rodgers MT. Base-pairing energies of proton-bound homodimers determined by guided ion beam tandem mass spectrometry: Application to cytosine and 5-substituted cytosines Analytical Chemistry. 85: 11000-11006. PMID 24117448 DOI: 10.1021/Ac402542G  0.43
2013 Chen Y, Chinthaka SD, Rodgers MT. Silver cation affinities of monomeric building blocks of polyethers and polyphenols determined by guided ion beam tandem mass spectrometry. The Journal of Physical Chemistry. A. 117: 8274-84. PMID 23914909 DOI: 10.1021/Jp402224T  0.455
2013 Yang B, Wu RR, Polfer NC, Berden G, Oomens J, Rodgers MT. IRMPD action spectroscopy of alkali metal cation-cytosine complexes: Effects of alkali metal cation size on gas phase conformation Journal of the American Society For Mass Spectrometry. 24: 1523-1533. PMID 23893433 DOI: 10.1007/S13361-013-0689-7  0.425
2013 Nose H, Chen Y, Rodgers MT. Energy-resolved collision-induced dissociation studies of 1,10-phenanthroline complexes of the late first-row divalent transition metal cations: determination of the third sequential binding energies. The Journal of Physical Chemistry. A. 117: 4316-30. PMID 23565706 DOI: 10.1021/Jp401711C  0.511
2013 Armentrout PB, Yang B, Rodgers MT. Metal cation dependence of interactions with amino acids: bond energies of Rb+ and Cs+ to Met, Phe, Tyr, and Trp. The Journal of Physical Chemistry. B. 117: 3771-81. PMID 23514190 DOI: 10.1021/Jp401366G  0.72
2013 Ervin KM, Rodgers MT. 2140 bond energies and counting: a tribute to Peter B. Armentrout. The Journal of Physical Chemistry. A. 117: 967-9. PMID 23406390 DOI: 10.1021/Jp401080R  0.627
2013 Nei YW, Hallowita N, Steill JD, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy of deprotonated DNA mononucleotides: Gas-phase conformations and energetics Journal of Physical Chemistry A. 117: 1319-1335. PMID 23289585 DOI: 10.1021/Jp3077936  0.38
2013 Austin CA, Chen Y, Kaczan CM, Berden G, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy of alkali metal cation-cyclen complexes: Effects of alkali metal cation size on gas-phase conformation Dedicated to the memory of Detlef Schröder a great gas phase ion chemist, mass spectrometrist, friend, and colleague. International Journal of Mass Spectrometry. 354: 346-355. DOI: 10.1016/J.Ijms.2013.08.004  0.443
2012 Armentrout PB, Citir M, Chen Y, Rodgers MT. Thermochemistry of alkali metal cation interactions with histidine: influence of the side chain. The Journal of Physical Chemistry. A. 116: 11823-32. PMID 23163558 DOI: 10.1021/Jp310179C  0.714
2012 Chen Y, Rodgers MT. Structural and energetic effects in the molecular recognition of acetylated amino acids by 18-crown-6. Journal of the American Society For Mass Spectrometry. 23: 2020-30. PMID 22926972 DOI: 10.1007/S13361-012-0466-Z  0.461
2012 Chen Y, Rodgers MT. Re-evaluation of the proton affinity of 18-crown-6 using competitive threshold collision-induced dissociation techniques. Analytical Chemistry. 84: 7570-7. PMID 22881454 DOI: 10.1021/Ac301804J  0.393
2012 Crampton KT, Rathur AI, Nei YW, Berden G, Oomens J, Rodgers MT. Protonation preferentially stabilizes minor tautomers of the halouracils: IRMPD action spectroscopy and theoretical studies Journal of the American Society For Mass Spectrometry. 23: 1469-1478. PMID 22821195 DOI: 10.1007/S13361-012-0434-7  0.458
2012 Armentrout PB, Chen Y, Rodgers MT. Metal cation dependence of interactions with amino acids: bond energies of Cs+ to Gly, Pro, Ser, Thr, and Cys. The Journal of Physical Chemistry. A. 116: 3989-99. PMID 22452793 DOI: 10.1021/Jp3012766  0.73
2012 Chen Y, Rodgers MT. Structural and energetic effects in the molecular recognition of amino acids by 18-crown-6. Journal of the American Chemical Society. 134: 5863-75. PMID 22400976 DOI: 10.1021/Ja211021H  0.435
2012 Yang Z, Rodgers MT. Tautomerization in the formation and collision-induced dissociation of alkali metal cation-cytosine complexes. Physical Chemistry Chemical Physics : Pccp. 14: 4517-26. PMID 22361913 DOI: 10.1039/C2Cp23794F  0.512
2012 Chinthaka SD, Rodgers MT. Sodium cation affinities of commonly used MALDI matrices determined by guided ion beam tandem mass spectrometry. Journal of the American Society For Mass Spectrometry. 23: 676-89. PMID 22302589 DOI: 10.1007/S13361-012-0336-8  0.514
2012 Chen Y, Rodgers MT. Structural and energetic effects in the molecular recognition of protonated peptidomimetic bases by 18-crown-6. Journal of the American Chemical Society. 134: 2313-24. PMID 22239090 DOI: 10.1021/Ja2102345  0.391
2012 Rodgers MT, Clemmer DE. Ion structures and energetics, and ion-molecule reaction kinetics in the gas phase: A collection of invited papers dedicated to Peter B. Armentrout on the occasion of his 60th birthday International Journal of Mass Spectrometry. 1. DOI: 10.1016/J.Ijms.2012.11.002  0.386
2012 Austin CA, Chen Y, Rodgers MT. Alkali metal cation–cyclen complexes: Effects of alkali metal cation size on the structure and binding energy International Journal of Mass Spectrometry. 330: 27-34. DOI: 10.1016/J.Ijms.2012.08.033  0.505
2012 Armentrout PB, Austin CA, Rodgers MT. Alkali metal cation interactions with 12-crown-4 in the gas phase: Revisited International Journal of Mass Spectrometry. 330: 16-26. DOI: 10.1016/J.Ijms.2012.06.018  0.697
2011 Fales BS, Fujamade NO, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy and theoretical studies of triethyl phosphate complexes: effects of protonation and sodium cationization on structure. Journal of the American Society For Mass Spectrometry. 22: 1862-71. PMID 21952899 DOI: 10.1007/s13361-011-0208-7  0.383
2011 Fales BS, Fujamade NO, Nei YW, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy and theoretical studies of diethyl phosphate complexes: effects of protonation and sodium cationization on structure. Journal of the American Society For Mass Spectrometry. 22: 81-92. PMID 21472547 DOI: 10.1007/S13361-010-0007-6  0.497
2011 Nei YW, Akinyemi TE, Kaczan CM, Steill JD, Berden G, Oomens J, Rodgers MT. Infrared multiple photon dissociation action spectroscopy of sodiated uracil and thiouracils: Effects of thioketo-substitution on gas-phase conformation International Journal of Mass Spectrometry. 308: 191-202. DOI: 10.1016/J.Ijms.2011.06.019  0.417
2010 Citir M, Stennett EMS, Oomens J, Steill JD, Rodgers MT, Armentrout PB. Infrared multiple photon dissociation spectroscopy of cationized cysteine: Effects of metal cation size on gas-phase conformation International Journal of Mass Spectrometry. 297: 9-17. DOI: 10.1016/J.Ijms.2010.04.009  0.698
2009 Rannulu NS, Rodgers MT. Solvation of copper ions by imidazole: structures and sequential binding energies of Cu+(imidazole)x, x = 1-4. Competition between ion solvation and hydrogen bonding. Physical Chemistry Chemical Physics : Pccp. 7: 1014-25. PMID 19791394 DOI: 10.1039/B418141G  0.509
2009 Ruan C, Rodgers MT. Modeling metal cation-phosphate interactions in nucleic acids: Activated dissociation of Mg+, Al+, Cu+, and Zn + complexes of triethyl phosphate Journal of the American Chemical Society. 131: 10918-10928. PMID 19618931 DOI: 10.1021/Ja8092357  0.499
2009 Hallowita N, Udonkang E, Ruan C, Frieler C, Rodgers M. Inductive effects on cation–π interactions: Structures and bond dissociation energies of alkali metal cation–halobenzene complexes International Journal of Mass Spectrometry. 283: 35-47. DOI: 10.1016/J.Ijms.2009.01.006  0.492
2008 Armentrout PB, Ervin KM, Rodgers MT. Statistical rate theory and kinetic energy-resolved ion chemistry: theory and applications. The Journal of Physical Chemistry. A. 112: 10071-85. PMID 18808103 DOI: 10.1021/Jp805343H  0.753
2008 Hallowita N, Carl DR, Armentrout PB, Rodgers MT. Dipole effects on cation-pi interactions: absolute bond dissociation energies of complexes of alkali metal cations to N-methylaniline and N,N-dimethylaniline. The Journal of Physical Chemistry. A. 112: 7996-8008. PMID 18698747 DOI: 10.1021/Jp800434V  0.825
2008 Ruan C, Huang H, Rodgers MT. A simple model for metal cation-phosphate interactions in nucleic acids in the gas phase: alkali metal cations and trimethyl phosphate. Journal of the American Society For Mass Spectrometry. 19: 305-14. PMID 18409209 DOI: 10.1016/J.Jasms.2007.10.006  0.479
2008 Rodgers MT, Armentrout PB, Oomens J, Steill JD. Infrared multiphoton dissociation spectroscopy of cationized threonine: effects of alkali-metal cation size on gas-phase conformation. The Journal of Physical Chemistry. A. 112: 2258-67. PMID 18288826 DOI: 10.1021/Jp711237G  0.678
2008 Armentrout PB, Rodgers MT, Oomens J, Steill JD. Infrared multiphoton dissociation spectroscopy of cationized serine: effects of alkali-metal cation size on gas-phase conformation. The Journal of Physical Chemistry. A. 112: 2248-57. PMID 18288825 DOI: 10.1021/jp710885a  0.645
2008 Yang Z, Rannulu NS, Chu Y, Rodgers MT. Bond dissociation energies and equilibrium structures of Cu+(MeOH)x, x = 1-6, in the gas phase: competition between solvation of the metal ion and hydrogen-bonding interactions. The Journal of Physical Chemistry. A. 112: 388-401. PMID 18171033 DOI: 10.1021/Jp076964V  0.512
2007 Ruan C, Huang H, Rodgers MT. Modeling metal cation-phosphate interactions in nucleic acids in the gas phase via alkali metal cation-triethyl phosphate complexes. The Journal of Physical Chemistry. A. 111: 13521-7. PMID 18052264 DOI: 10.1021/Jp076449X  0.484
2007 Ruan C, Yang Z, Rodgers MT. Influence of the d orbital occupation on the nature and strength of copper cation-pi interactions: threshold collision-induced dissociation and theoretical studies. Physical Chemistry Chemical Physics : Pccp. 9: 5902-18. PMID 17989799 DOI: 10.1039/B709820K  0.467
2007 Chinthaka SD, Rodgers MT. Potassium cation affinities of matrix assisted laser desorption ionization matrices determined by threshold collision-induced dissociation: application to benzoic acid derivatives. The Journal of Physical Chemistry. A. 111: 8152-62. PMID 17672435 DOI: 10.1021/Jp0667238  0.46
2007 Rannulu NS, Rodgers MT. Noncovalent interactions of Cu+ with N-donor ligands (pyridine, 4,4-dipyridyl, 2,2-dipyridyl, and 1,10-phenanthroline): collision-induced dissociation and theoretical studies. The Journal of Physical Chemistry. A. 111: 3465-79. PMID 17439193 DOI: 10.1021/JP066903H  0.304
2007 Chinthaka SD, Chu Y, Rannulu NS, Rodgers MT. Sodium cation affinities of MALDI matrices determined by guided ion beam tandem mass spectrometry: application to benzoic acid derivatives. The Journal of Physical Chemistry. A. 110: 1426-37. PMID 16435803 DOI: 10.1021/Jp054698K  0.508
2007 Yang Z, Ruan C, Ahmed H, Rodgers M. Probing the potential energy landscape for dissociation of protonated indole via threshold collision-induced dissociation and theoretical studies International Journal of Mass Spectrometry. 265: 388-400. DOI: 10.1016/J.Ijms.2007.06.016  0.508
2007 Ruan C, Yang Z, Rodgers MT. Cation-π interactions with a π-excessive nitrogen heterocycle: Structures and absolute binding energies of alkali metal cation–pyrrole complexes International Journal of Mass Spectrometry. 267: 233-247. DOI: 10.1016/J.Ijms.2007.02.041  0.503
2007 Rodgers MT, Armentrout PB. A critical evaluation of the experimental and theoretical determination of lithium cation affinities International Journal of Mass Spectrometry. 267: 167-182. DOI: 10.1016/J.Ijms.2007.02.034  0.65
2006 Bennett MT, Rodgers MT, Hebert AS, Ruslander LE, Eisele L, Drohat AC. Specificity of human thymine DNA glycosylase depends on N-glycosidic bond stability. Journal of the American Chemical Society. 128: 12510-9. PMID 16984202 DOI: 10.1021/Ja0634829  0.342
2006 Yang Z, Rodgers MT. Influence of thioketo substitution on the properties of uracil and its noncovalent interactions with alkali metal ions: threshold collision-induced dissociation and theoretical studies. The Journal of Physical Chemistry. A. 110: 1455-68. PMID 16435805 DOI: 10.1021/Jp054849J  0.539
2005 Ruan C, Yang Z, Hallowita N, Rodgers MT. Cation-pi interactions with a model for the side chain of tryptophan: structures and absolute binding energies of alkali metal cation-indole complexes. The Journal of Physical Chemistry. A. 109: 11539-50. PMID 16354046 DOI: 10.1021/Jp053830D  0.499
2005 Yang Z, Rodgers M. Influence of methylation on the properties of uracil and its noncovalent interactions with alkali metal ions International Journal of Mass Spectrometry. 241: 225-242. DOI: 10.1016/J.Ijms.2004.11.018  0.572
2004 Rodgers MT, Armentrout PB. A thermodynamic "vocabulary" for metal ion interactions in biological systems. Accounts of Chemical Research. 37: 989-98. PMID 15609991 DOI: 10.1021/Ar0302843  0.68
2004 Yang Z, Rodgers MT. Influence of halogenation on the properties of uracil and its noncovalent interactions with alkali metal ions. Threshold collision-induced dissociation and theoretical studies. Journal of the American Chemical Society. 126: 16217-26. PMID 15584758 DOI: 10.1021/Ja045375P  0.532
2004 Ruan C, Rodgers MT. Cation-π interactions: Structures and energetics of complexation of Na+ and K+ with the aromatic amino acids, phenylalanine, tyrosine, and tryptophan Journal of the American Chemical Society. 126: 14600-14610. PMID 15521780 DOI: 10.1021/Ja048297E  0.527
2004 Yang Z, Rodgers MT. Theoretical studies of the unimolecular and bimolecular tautomerization of cytosineElectronic supplementary information (ESI) available: tables of MP2(full)/6-31G* optimized geometries, rotational constants, and scaled vibrational frequencies for isolated monomers of the six low-energy tautomers of cytosine and corresponding transition states for unimolecular tautomerization; B3LYP/6-31G* optimized geometries, rotational constants, and scaled vibrational frequencies for six cytosine dimers and corresponding transition states for bimolecular tautomerization. See http://www.rsc.org/suppdata/cp/b3/b315089e/ Physical Chemistry Chemical Physics. 6: 2749. DOI: 10.1039/B315089E  0.386
2004 Rannulu NS, Amunugama R, Yang Z, Rodgers MT. Influence of s and d Orbital Occupation on the Binding of Metal Ions to Imidazole The Journal of Physical Chemistry A. 108: 6385-6396. DOI: 10.1021/Jp048500S  0.459
2003 Amunugama R, Rodgers M. Cation-π interactions with a model for an extended π network International Journal of Mass Spectrometry. 227: 1-20. DOI: 10.1016/S1387-3806(03)00039-3  0.502
2003 Armentrout PB, Bowers MT, Rodgers MT. A celebration of the scientific and personal contributions of Jesse (Jack) L. Beauchamp International Journal of Mass Spectrometry. 222: ix-xi. DOI: 10.1016/S1387-3806(02)01041-2  0.516
2003 Amunugama R, Rodgers M. Influence of substituents on cation–π interactions International Journal of Mass Spectrometry. 222: 431-450. DOI: 10.1016/S1387-3806(02)00945-4  0.498
2002 Chu Y, Yang Z, Rodgers MT. Solvation of copper ions by acetone. structures and sequential binding energies of Cu+(acetone)x, x = 1-4 from collision-induced dissociation and theoretical studies. Journal of the American Society For Mass Spectrometry. 13: 453-468. PMID 12019969 DOI: 10.1016/S1044-0305(02)00355-0  0.485
2002 Rodgers MT, Armentrout PB. Influence of d orbital occupation on the binding of metal ions to adenine. Journal of the American Chemical Society. 124: 2678-91. PMID 11890819 DOI: 10.1021/Ja011278+  0.7
2002 Amunugama R, Rodgers MT. Influence of Substituents on Cation−π Interactions. 1. Absolute Binding Energies of Alkali Metal Cation−Toluene Complexes Determined by Threshold Collision-Induced Dissociation and Theoretical Studies The Journal of Physical Chemistry A. 106: 5529-5539. DOI: 10.1021/JP014307B  0.337
2002 Huang H, Rodgers MT. Sigma versus Pi Interactions in Alkali Metal Ion Binding to Azoles:  Threshold Collision-Induced Dissociation and ab Initio Theory Studies The Journal of Physical Chemistry A. 106: 4277-4289. DOI: 10.1021/Jp013630B  0.54
2001 Rodgers MT. Substituent effects in the binding of alkali metal ions to pyridines studied by threshold collision-induced dissociation and ab initio theory: The aminopyridines Journal of Physical Chemistry A. 105: 8145-8153. DOI: 10.1021/Jp011555Z  0.569
2000 Rodgers MT, Armentrout PB. Noncovalent metal-ligand bond energies as studied by threshold collision-induced dissociation Mass Spectrometry Reviews. 19: 215-47. PMID 10986693 DOI: 10.1002/1098-2787(200007)19:4<215::Aid-Mas2>3.0.Co;2-X  0.697
2000 Armentrout PB, Rodgers MT. An absolute sodium cation affinity scale: Threshold collision-induced dissociation experiments and ab initio theory Journal of Physical Chemistry A. 104: 2238-2247. DOI: 10.1021/Jp991716N  0.707
2000 Rodgers MT, Stanley JR, Amunugama R. Periodic Trends in the Binding of Metal Ions to Pyridine Studied by Threshold Collision-Induced Dissociation and Density Functional Theory Journal of the American Chemical Society. 122: 10969-10978. DOI: 10.1021/Ja0027923  0.409
2000 Rodgers MT, Armentrout PB. Noncovalent interactions of nucleic acid bases (uracil, thymine, and adenine) with alkali metal ions. Threshold collision-induced dissociation and theoretical studies Journal of the American Chemical Society. 122: 8548-8558. DOI: 10.1021/Ja001638D  0.733
2000 Amunugama R, Rodgers MT. Absolute alkali metal ion binding affinities of several azines determined by threshold collision-induced dissociation and ab initio theory International Journal of Mass Spectrometry. 195: 439-457. DOI: 10.1016/S1387-3806(99)00145-1  0.577
1999 Rodgers MT, Armentrout PB. Absolute Binding Energies of Sodium Ions to Short Chain Alcohols, CnH2n+2O, n = 1-4, Determined by Threshold Collision-Induced Dissociation Experiments and Ab Initio Theory Journal of Physical Chemistry A. 103: 4955-4963. DOI: 10.1021/Jp990656I  0.662
1999 Rodgers MT, Walker B, Armentrout PB. Reactions of Cu+(1S and 3D) with O2, CO, CO2, N2, NO, N2O, and NO2 studied by guided ion beam mass spectrometry International Journal of Mass Spectrometry. 182: 99-120. DOI: 10.1016/S1387-3806(98)14228-8  0.615
1999 Rodgers MT, Armentrout PB. Absolute alkali metal ion binding affinities of several azoles determined by threshold collision-induced dissociation International Journal of Mass Spectrometry. 185: 359-380. DOI: 10.1016/S1387-3806(98)14134-9  0.714
1998 Rodgers MT, Armentrout PB. Statistical modeling of competitive threshold collision-induced dissociation The Journal of Chemical Physics. 109: 1787-1800. DOI: 10.1063/1.476754  0.692
1998 Xu J, Rodgers MT, Griffin JB, Armentrout PB. Guided ion beam studies of the reactions of Vn+ (n=2–17) with O2: Bond energies and dissociation pathways The Journal of Chemical Physics. 108: 9339-9350. DOI: 10.1063/1.476386  0.653
1997 Rodgers MT, Ervin KM, Armentrout PB. Statistical modeling of collision-induced dissociation thresholds Journal of Chemical Physics. 106: 4499-4508. DOI: 10.1063/1.473494  0.721
1997 Rodgers MT, Armentrout PB. Absolute Binding Energies of Lithium Ions to Short Chain Alcohols, CnH2n+2O,n= 1−4, Determined by Threshold Collision-Induced Dissociation The Journal of Physical Chemistry A. 101: 2614-2625. DOI: 10.1021/Jp970154+  0.701
1997 Rodgers MT, Armentrout PB. Collision-Induced Dissociation Measurements on Li+(H2O)n,n= 1−6:  The First Direct Measurement of the Li+−OH2Bond Energy The Journal of Physical Chemistry A. 101: 1238-1249. DOI: 10.1021/Jp962170X  0.689
1997 Rodgers M, Campbell SA, Beauchamp J. Site-specific lithium ion attachment directs low-energy dissociation pathways of dinucleotides in the gas phase. Application to nucleic acid sequencing by mass spectrometry International Journal of Mass Spectrometry and Ion Processes. 161: 193-216. DOI: 10.1016/S0168-1176(96)04435-7  0.695
1995 Campbell S, Rodgers MT, Marzluff EM, Beauchamp JL. Deuterium Exchange Reactions as a Probe of Biomolecule Structure. Fundamental Studies of Gas Phase H/D Exchange Reactions of Protonated Glycine Oligomers with D2O, CD3OD, CD3CO2D, and ND3 Journal of the American Chemical Society. 117: 12840-12854. DOI: 10.1021/Ja00156A023  0.631
1995 Rodgers MT, Campbell S, Marzluff EM, Beauchamp JL. Site-specific protonation directs low-energy dissociation pathways of dinucleotides in the gas phase International Journal of Mass Spectrometry and Ion Processes. 148: 1-23. DOI: 10.1016/0168-1176(95)04177-M  0.73
1994 Campbell S, Rodgers MT, Marzluff EM, Beauchamp JL. Structural and Energetic Constraints on Gas Phase Hydrogen/Deuterium Exchange Reactions of Protonated Peptides with D2O, CD3OD, CD3CO2D, and ND3 Journal of the American Chemical Society. 116: 9765-9766. DOI: 10.1021/Ja00100A058  0.634
1994 Marzluff EM, Campbell S, Rodgers MT, Beauchamp JL. Low-energy dissociation pathways of small deprotonated peptides in the gas phase Journal of the American Chemical Society. 116: 7787-7796. DOI: 10.1021/Ja00096A040  0.687
1994 Marzluff EM, Campbell S, Rodgers MT, Beauchamp JL. Collisional Activation of Large Molecules Is an Efficient Process Journal of the American Chemical Society. 116: 6947-6948. DOI: 10.1021/JA00094A064  0.529
1994 Marzluff EM, Campbell S, Rodgers MT, Beauchamp JL. Collisional activation of large molecules is an efficient process Journal of the American Chemical Society. 116: 6947-6948. DOI: 10.1021/Ja00094A064  0.639
1994 Campbell S, Marzluff EM, Rodgers MT, Beauchamp JL, Rempe ME, Schwinck KF, Lichtenberger DL. Proton Affinities and Photoelectron Spectra of Phenylalanine and N-Methyl- and N,N-Dimethylphenylalanine. Correlation of Lone Pair Ionization Energies with Proton Affinities and Implications for N-Methylation as a Method to Effect Site Specific Protonation of Peptides Journal of the American Chemical Society. 116: 5257-5264. DOI: 10.1021/Ja00091A033  0.682
1994 Rodgers MT, Campbell S, Marzluff EM, Beauchamp JL. Low-energy collision-induced dissociation of deprotonated dinucleotides: determination of the energetically favored dissociation pathways and the relative acidities of the nucleic acid bases International Journal of Mass Spectrometry and Ion Processes. 137: 121-149. DOI: 10.1016/0168-1176(94)04029-X  0.718
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