Year |
Citation |
Score |
2019 |
Newman ME, Sneppen K. Avalanches, scaling, and coherent noise. Physical Review. E, Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 54: 6226-6231. PMID 9965842 DOI: 10.1103/Physreve.54.6226 |
0.305 |
|
2019 |
Jensen GG, Uekermann F, Sneppen K. Multi stability and global bifurcations in epidemic model with distributed delay SIRnS-model European Physical Journal B. 92: 1-6. DOI: 10.1140/Epjb/E2018-90562-1 |
0.303 |
|
2018 |
Dahl-Jensen SB, Yennek S, Flasse L, Larsen HL, Sever D, Karremore G, Novak I, Sneppen K, Grapin-Botton A. Deconstructing the principles of ductal network formation in the pancreas. Plos Biology. 16: e2002842. PMID 30048442 DOI: 10.1371/Journal.Pbio.2002842 |
0.304 |
|
2017 |
Nissen SB, Perera M, Gonzalez JM, Morgani SM, Jensen MH, Sneppen K, Brickman JM, Trusina A. Four simple rules that are sufficient to generate the mammalian blastocyst. Plos Biology. 15: e2000737. PMID 28700688 DOI: 10.1371/Journal.Pbio.2000737 |
0.33 |
|
2017 |
Sneppen K. Models of life: epigenetics, diversity and cycles. Reports On Progress in Physics. Physical Society (Great Britain). 80: 042601. PMID 28106010 DOI: 10.1088/1361-6633/Aa5Aeb |
0.312 |
|
2016 |
Mitarai N, Gunnarson I, Pedersen BN, Rosiek CA, Sneppen K. Three is much more than two in coarsening dynamics of cyclic competitions. Physical Review. E. 93: 042408. PMID 27176330 DOI: 10.1103/Physreve.93.042408 |
0.302 |
|
2016 |
Dahl-Jensen SB, Figueiredo-Larsen M, Grapin-Botton A, Sneppen K. Short-range growth inhibitory signals from the epithelium can drive non-stereotypic branching in the pancreas. Physical Biology. 13: 016007. PMID 26906913 DOI: 10.1088/1478-3975/13/1/016007 |
0.318 |
|
2012 |
Mitarai N, Mathiesen J, Sneppen K. Emergence of diversity in a model ecosystem. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 86: 011929. PMID 23005473 DOI: 10.1103/Physreve.86.011929 |
0.311 |
|
2012 |
Cataudella I, Trusina A, Sneppen K, Gerdes K, Mitarai N. Conditional cooperativity in toxin-antitoxin regulation prevents random toxin activation and promotes fast translational recovery. Nucleic Acids Research. 40: 6424-34. PMID 22495927 DOI: 10.1093/Nar/Gks297 |
0.304 |
|
2011 |
Mathiesen J, Mitarai N, Sneppen K, Trusina A. Ecosystems with mutually exclusive interactions self-organize to a state of high diversity. Physical Review Letters. 107: 188101. PMID 22107676 DOI: 10.1103/Physrevlett.107.188101 |
0.303 |
|
2011 |
Bendtsen KM, Erdossy J, Csiszovszki Z, Svenningsen SL, Sneppen K, Krishna S, Semsey S. Direct and indirect effects in the regulation of overlapping promoters. Nucleic Acids Research. 39: 6879-85. PMID 21609952 DOI: 10.1093/Nar/Gkr390 |
0.31 |
|
2010 |
Sneppen K, Krishna S, Semsey S. Simplified models of biological networks. Annual Review of Biophysics. 39: 43-59. PMID 20192769 DOI: 10.1146/Annurev.Biophys.093008.131241 |
0.331 |
|
2009 |
Avlund M, Dodd IB, Sneppen K, Krishna S. Minimal gene regulatory circuits that can count like bacteriophage lambda. Journal of Molecular Biology. 394: 681-93. PMID 19796646 DOI: 10.1016/J.Jmb.2009.09.053 |
0.329 |
|
2009 |
Maslov S, Krishna S, Pang TY, Sneppen K. Toolbox model of evolution of prokaryotic metabolic networks and their regulation. Proceedings of the National Academy of Sciences of the United States of America. 106: 9743-8. PMID 19482938 DOI: 10.1073/Pnas.0903206106 |
0.313 |
|
2009 |
Semsey S, Krishna S, Erdossy J, Horváth P, Orosz L, Sneppen K, Adhya S. Dominant negative autoregulation limits steady-state repression levels in gene networks. Journal of Bacteriology. 191: 4487-91. PMID 19429616 DOI: 10.1128/Jb.00056-09 |
0.305 |
|
2008 |
Axelsen JB, Krishna S, Sneppen K. The cost and capacity of signaling in theEscherichia coliprotein reaction network Journal of Statistical Mechanics: Theory and Experiment. 2008: P01018. DOI: 10.1088/1742-5468/2008/01/P01018 |
0.303 |
|
2007 |
Maslov S, Sneppen K, Ispolatov I. Spreading out of perturbations in reversible reaction networks. New Journal of Physics. 9: 273. PMID 18046464 DOI: 10.1088/1367-2630/9/8/273 |
0.324 |
|
2007 |
Tiana G, Krishna S, Pigolotti S, Jensen MH, Sneppen K. Oscillations and temporal signalling in cells. Physical Biology. 4: R1-17. PMID 17664651 DOI: 10.1088/1478-3975/4/2/R01 |
0.302 |
|
2007 |
Semsey S, Krishna S, Sneppen K, Adhya S. Signal integration in the galactose network of Escherichia coli. Molecular Microbiology. 65: 465-76. PMID 17630975 DOI: 10.1111/J.1365-2958.2007.05798.X |
0.321 |
|
2007 |
Stibius KB, Sneppen K. Modeling the two-hybrid detector: experimental bias on protein interaction networks. Biophysical Journal. 93: 2562-6. PMID 17557786 DOI: 10.1529/Biophysj.106.098236 |
0.32 |
|
2007 |
Dodd IB, Shearwin KE, Sneppen K. Modelling Transcriptional Interference and DNA Looping in Gene Regulation Journal of Molecular Biology. 369: 1200-1213. PMID 17498740 DOI: 10.1016/J.Jmb.2007.04.041 |
0.309 |
|
2007 |
Krishna S, Maslov S, Sneppen K. UV-induced mutagenesis in Escherichia coli SOS response: a quantitative model. Plos Computational Biology. 3: e41. PMID 17367202 DOI: 10.1371/Journal.Pcbi.0030041 |
0.325 |
|
2007 |
Enemark J, Sneppen K. Gene duplication models for directed networks with limits on growth Journal of Statistical Mechanics: Theory and Experiment. 2007: P11007-P11007. DOI: 10.1088/1742-5468/2007/11/P11007 |
0.338 |
|
2006 |
Rosvall M, Dodd IB, Krishna S, Sneppen K. Network models of phage-bacteria coevolution. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 74: 066105. PMID 17280119 DOI: 10.1103/Physreve.74.066105 |
0.331 |
|
2006 |
Axelsen JB, Bernhardsson S, Rosvall M, Sneppen K, Trusina A. Degree landscapes in scale-free networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 74: 036119. PMID 17025720 DOI: 10.1103/Physreve.74.036119 |
0.306 |
|
2006 |
Krishna S, Andersson AM, Semsey S, Sneppen K. Structure and function of negative feedback loops at the interface of genetic and metabolic networks. Nucleic Acids Research. 34: 2455-62. PMID 16684993 DOI: 10.1093/Nar/Gkl140 |
0.331 |
|
2006 |
Rosvall M, Sneppen K. Self-assembly of information in networks Europhysics Letters. 74: 1109-1115. DOI: 10.1209/Epl/I2006-10064-2 |
0.308 |
|
2005 |
Trusina A, Sneppen K, Dodd IB, Shearwin KE, Egan JB. Functional alignment of regulatory networks: a study of temperate phages. Plos Computational Biology. 1: e74. PMID 16477325 DOI: 10.1371/Journal.Pcbi.0010074 |
0.306 |
|
2005 |
Maslov S, Sneppen K. Computational architecture of the yeast regulatory network. Physical Biology. 2: S94-100. PMID 16280626 DOI: 10.1088/1478-3975/2/4/S03 |
0.326 |
|
2005 |
Sneppen K, Dodd IB, Shearwin KE, Palmer AC, Schubert RA, Callen BP, Egan JB. A mathematical model for transcriptional interference by RNA polymerase traffic in Escherichia coli Journal of Molecular Biology. 346: 399-409. PMID 15670592 DOI: 10.1016/J.Jmb.2004.11.075 |
0.303 |
|
2005 |
Kim BJ, Trusina A, Minnhagen P, Sneppen K. Self organized scale-free networks from merging and regeneration European Physical Journal B. 43: 369-372. DOI: 10.1140/Epjb/E2005-00065-Y |
0.307 |
|
2005 |
Grönlund A, Sneppen K, Minnhagen P. Correlations in Networks Associated to Preferential Growth Physica Scripta. 71: 680-682. DOI: 10.1088/0031-8949/71/6/018 |
0.31 |
|
2004 |
Maslov S, Sneppen K. Detection of topological patterns in protein networks. Genetic Engineering. 26: 33-47. PMID 15387292 DOI: 10.1007/978-0-306-48573-2_4 |
0.332 |
|
2004 |
Trusina A, Maslov S, Minnhagen P, Sneppen K. Hierarchy measures in complex networks. Physical Review Letters. 92: 178702. PMID 15169201 DOI: 10.1103/Physrevlett.92.178702 |
0.322 |
|
2004 |
Maslov S, Sneppen K, Eriksen KA, Yan KK. Upstream plasticity and downstream robustness in evolution of molecular networks. Bmc Evolutionary Biology. 4: 9. PMID 15070432 DOI: 10.1186/1471-2148-4-9 |
0.327 |
|
2004 |
Sneppen K, Rosvall M, Trusina A, Minnhagen P. A simple model for self-organization of bipartite networks Europhysics Letters. 67: 349-354. DOI: 10.1209/Epl/I2004-10074-0 |
0.304 |
|
2004 |
Minnhagen P, Rosvall M, Sneppen K, Trusina A. Self-organization of structures and networks from merging and small-scale fluctuations Physica a: Statistical Mechanics and Its Applications. 340: 725-732. DOI: 10.1016/J.Physa.2004.05.019 |
0.312 |
|
2004 |
Simonsen I, Eriksen KA, Maslov S, Sneppen K. Diffusion on complex networks: A way to probe their large-scale topological structures Physica a: Statistical Mechanics and Its Applications. 336: 163-173. DOI: 10.1016/J.Physa.2004.01.021 |
0.306 |
|
2004 |
Maslov S, Sneppen K, Zaliznyak A. Detection of topological patterns in complex networks: correlation profile of the internet Physica a-Statistical Mechanics and Its Applications. 333: 529-540. DOI: 10.1016/J.Physa.2003.06.002 |
0.318 |
|
2003 |
Rosvall M, Sneppen K. Modeling dynamics of information networks. Physical Review Letters. 91: 178701. PMID 14611380 DOI: 10.1103/Physrevlett.91.178701 |
0.326 |
|
2002 |
Maslov S, Sneppen K. Protein interaction networks beyond artifacts. Febs Letters. 530: 255-6. PMID 12387903 DOI: 10.1016/S0014-5793(02)03428-2 |
0.314 |
|
2002 |
Aurell E, Brown S, Johanson J, Sneppen K. Stability puzzles in phage lambda. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 65: 051914. PMID 12059600 DOI: 10.1103/Physreve.65.051914 |
0.301 |
|
2002 |
Maslov S, Sneppen K. Specificity and stability in topology of protein networks. Science (New York, N.Y.). 296: 910-3. PMID 11988575 DOI: 10.1126/Science.1065103 |
0.326 |
|
2001 |
Bornholdt S, Sneppen K. Robustness as an evolutionary principle. Proceedings. Biological Sciences. 267: 2281-6. PMID 11413644 DOI: 10.1098/Rspb.2000.1280 |
0.338 |
|
1999 |
Hansen A, Jensen MH, Sneppen K, Zocchi G. A model for the thermodynamics of globular proteins Physica a: Statistical Mechanics and Its Applications. 270: 278-287. DOI: 10.1016/S0378-4371(99)00131-4 |
0.3 |
|
1998 |
Christensen K, Donangelo R, Koiller B, Sneppen K. Evolution of Random Networks Physical Review Letters. 81: 2380-2383. DOI: 10.1103/Physrevlett.81.2380 |
0.32 |
|
1995 |
Sneppen K, Bak P, Flyvbjerg H, Jensen MH. Evolution as a self-organized critical phenomenon Proceedings of the National Academy of Sciences of the United States of America. 92: 5209-5213. PMID 7761475 DOI: 10.1073/Pnas.92.11.5209 |
0.304 |
|
1995 |
HUBER G, JENSEN MH, SNEPPEN K. A DIMENSION FORMULA FOR SELF-SIMILAR AND SELF-AFFINE FRACTALS Fractals. 3: 525-531. DOI: 10.1142/S0218348X9500045X |
0.475 |
|
1995 |
Huber G, Jensen MH, Sneppen K. Distributions of self-interactions and voids in (1+1)-dimensional directed percolation Physical Review E. 52. DOI: 10.1103/Physreve.52.R2133 |
0.485 |
|
1994 |
Falk J, Jensen MH, Sneppen K. Intermittent dynamics and self-organized depinning in propagating fronts Physical Review E. 49: 2804-2808. DOI: 10.1103/Physreve.49.2804 |
0.301 |
|
1993 |
Flyvbjerg H, Sneppen K, Bak P. Mean field theory for a simple model of evolution. Physical Review Letters. 71: 4087-4090. PMID 10055150 DOI: 10.1103/Physrevlett.71.4087 |
0.3 |
|
1993 |
Bak P, Sneppen K. Punctuated equilibrium and criticality in a simple model of evolution. Physical Review Letters. 71: 4083-4086. PMID 10055149 DOI: 10.1103/Physrevlett.71.4083 |
0.321 |
|
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