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Tal Shay, Ph.D. - Publications

Affiliations: 
2009 PCS Physics of Complex Systems Weizmann Institute of Science, Rehovot, Israel 
Area:
General Physics, General Biophysics, Genetics
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34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Kim EY, Ner-Gaon H, Varon J, Cullen AM, Guo J, Choi J, Barragan-Bradford D, Higuera A, Pinilla-Vera M, Short SA, Arciniegas-Rubio AJ, Tamura T, Leaf DE, Baron RM, Shay T, et al. Post-sepsis immunosuppression depends on NKT cell regulation of mTOR/IFNγ in NK cells. The Journal of Clinical Investigation. PMID 32154791 DOI: 10.1172/Jci128075  0.31
2018 Lieberman Y, Rokach L, Shay T. CaSTLe - Classification of single cells by transfer learning: Harnessing the power of publicly available single cell RNA sequencing experiments to annotate new experiments. Plos One. 13: e0205499. PMID 30304022 DOI: 10.1371/Journal.Pone.0205499  0.305
2018 Gazit R, Goldstein O, Shay T. Splicing in Hematopoietic Stem Cells Experimental Hematology. 64: S67. DOI: 10.1016/J.Exphem.2018.06.229  0.303
2017 Ner-Gaon H, Melchior A, Golan N, Ben-Haim Y, Shay T. JingleBells: A Repository of Immune-Related Single-Cell RNA-Sequencing Datasets. Journal of Immunology (Baltimore, Md. : 1950). 198: 3375-3379. PMID 28416714 DOI: 10.4049/Jimmunol.1700272  0.32
2016 Goldstein O, Meyer K, Greenshpan Y, Bujanover N, Feigin M, Ner-Gaon H, Shay T, Gazit R. Mapping Whole-Transcriptome Splicing in Mouse Hematopoietic Stem Cells. Stem Cell Reports. PMID 28041879 DOI: 10.1016/J.Stemcr.2016.12.002  0.429
2015 Kurscheid S, Bady P, Sciuscio D, Samarzija I, Shay T, Vassallo I, Criekinge WV, Daniel RT, van den Bent MJ, Marosi C, Weller M, Mason WP, Domany E, Stupp R, Delorenzi M, et al. Chromosome 7 gain and DNA hypermethylation at the HOXA10 locus are associated with expression of a stem cell related HOX-signature in glioblastoma. Genome Biology. 16: 16. PMID 25622821 DOI: 10.1186/S13059-015-0583-7  0.597
2014 Kurscheid S, Bady P, Sciuscio D, Samarzija I, Shay T, Vassallo I, Van Criekinge W, Domany E, Stupp R, Delorenzi M, Hegi M. EG-05 * COMBINATION OF GENE COPY GAIN AND EPIGENETIC DEREGULATION ARE ASSOCIATED WITH THE ABERRANT EXPRESSION OF A STEM CELL RELATED HOX-SIGNATURE IN GLIOBLASTOMA Neuro-Oncology. 16: v75-v76. DOI: 10.1093/Neuonc/Nou254.5  0.579
2013 Gazit R, Garrison BS, Rao TN, Shay T, Costello J, Ericson J, Kim F, Collins JJ, Regev A, Wagers AJ, Rossi DJ. Transcriptome analysis identifies regulators of hematopoietic stem and progenitor cells. Stem Cell Reports. 1: 266-80. PMID 24319662 DOI: 10.1016/J.Stemcr.2013.07.004  0.408
2013 Shay T, Kang J. Immunological Genome Project and systems immunology. Trends in Immunology. 34: 602-9. PMID 23631936 DOI: 10.1016/J.It.2013.03.004  0.357
2013 Jojic V, Shay T, Sylvia K, Zuk O, Sun X, Kang J, Regev A, Koller D, Best AJ, Knell J, Goldrath A, Joic V, Koller D, Shay T, et al. Identification of transcriptional regulators in the mouse immune system. Nature Immunology. 14: 633-43. PMID 23624555 DOI: 10.1038/Ni.2587  0.439
2013 Shay T, Jojic V, Zuk O, Rothamel K, Puyraimond-Zemmour D, Feng T, Wakamatsu E, Benoist C, Koller D, Regev A. Conservation and divergence in the transcriptional programs of the human and mouse immune systems Proceedings of the National Academy of Sciences of the United States of America. 110: 2946-2951. PMID 23382184 DOI: 10.1073/Pnas.1222738110  0.427
2013 Cohen NR, Brennan PJ, Shay T, Watts GF, Brigl M, Kang J, Brenner MB. Shared and distinct transcriptional programs underlie the hybrid nature of iNKT cells. Nature Immunology. 14: 90-9. PMID 23202270 DOI: 10.1038/Ni.2490  0.366
2012 Gautiar EL, Shay T, Miller J, Greter M, Jakubzick C, Ivanov S, Helft J, Chow A, Elpek KG, Gordonov S, Mazloom AR, Ma'Ayan A, Chua WJ, Hansen TH, Turley SJ, et al. Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages Nature Immunology. 13: 1118-1128. PMID 23023392 DOI: 10.1038/Ni.2419  0.383
2012 Miller JC, Brown BD, Shay T, Gautier EL, Jojic V, Cohain A, Pandey G, Leboeuf M, Elpek KG, Helft J, Hashimoto D, Chow A, Price J, Greter M, Bogunovic M, et al. Deciphering the transcriptional network of the dendritic cell lineage. Nature Immunology. 13: 888-99. PMID 22797772 DOI: 10.1038/Ni.2370  0.302
2012 Tarcic G, Avraham R, Pines G, Amit I, Shay T, Lu Y, Zwang Y, Katz M, Ben-Chetrit N, Jacob-Hirsch J, Virgilio L, Rechavi G, Mavrothalassitis G, Mills GB, Domany E, et al. EGR1 and the ERK-ERF axis drive mammary cell migration in response to EGF. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 26: 1582-92. PMID 22198386 DOI: 10.1096/Fj.11-194654  0.561
2011 Valenti F, Fausti F, Biagioni F, Shay T, Fontemaggi G, Domany E, Yaffe MB, Strano S, Blandino G, Di Agostino S. Mutant p53 oncogenic functions are sustained by Plk2 kinase through an autoregulatory feedback loop Cell Cycle. 10: 4330-4340. PMID 22134238 DOI: 10.4161/Cc.10.24.18682  0.549
2011 Lambiv WL, Vassallo I, Delorenzi M, Shay T, Diserens AC, Misra A, Feuerstein B, Murat A, Migliavacca E, Hamou MF, Sciuscio D, Burger R, Domany E, Stupp R, Hegi ME. The Wnt inhibitory factor 1 (WIF1) is targeted in glioblastoma and has a tumor suppressing function potentially by induction of senescence. Neuro-Oncology. 13: 736-47. PMID 21642372 DOI: 10.1093/Neuonc/Nor036  0.606
2011 Zwang Y, Sas-Chen A, Drier Y, Shay T, Avraham R, Lauriola M, Shema E, Lidor-Nili E, Jacob-Hirsch J, Amariglio N, Lu Y, Mills GB, Rechavi G, Oren M, Domany E, et al. Two phases of mitogenic signaling unveil roles for p53 and EGR1 in elimination of inconsistent growth signals. Molecular Cell. 42: 524-35. PMID 21596316 DOI: 10.1016/J.Molcel.2011.04.017  0.523
2011 Novershtern N, Subramanian A, Lawton LN, Mak RH, Haining WN, McConkey ME, Habib N, Yosef N, Chang CY, Shay T, Frampton GM, Drake AC, Leskov I, Nilsson B, Preffer F, et al. Densely interconnected transcriptional circuits control cell states in human hematopoiesis. Cell. 144: 296-309. PMID 21241896 DOI: 10.1016/J.Cell.2011.01.004  0.416
2011 Vassallo I, Lambiv W, Delorenzi M, Shay T, Diserens A, Misra A, Feuerstein B, Murat A, Migliavacca E, Hamou M, Domany E, Stupp R, Hegi ME. Abstract 2117: The Wnt inhibitory factor 1 (WIF-1) has tumor suppressing functions in glioblastoma potentially by inducing cellular senescence Cancer Research. 71: 2117-2117. DOI: 10.1158/1538-7445.Am2011-2117  0.626
2010 Nadav-Dagan L, Shay T, Dezorella N, Naparstek E, Domany E, Katz BZ, Geiger B. Adhesive interactions regulate transcriptional diversity in malignant B cells. Molecular Cancer Research : McR. 8: 482-93. PMID 20371671 DOI: 10.1158/1541-7786.Mcr-09-0182  0.594
2009 Fontemaggi G, Dell'Orso S, Trisciuoglio D, Shay T, Melucci E, Fazi F, Terrenato I, Mottolese M, Muti P, Domany E, Del Bufalo D, Strano S, Blandino G. The execution of the transcriptional axis mutant p53, E2F1 and ID4 promotes tumor neo-angiogenesis. Nature Structural & Molecular Biology. 16: 1086-93. PMID 19783986 DOI: 10.1038/Nsmb.1669  0.567
2009 Amit I, Garber M, Chevrier N, Leite AP, Donner Y, Eisenhaure T, Guttman M, Grenier JK, Li W, Zuk O, Schubert LA, Birditt B, Shay T, Goren A, Zhang X, et al. Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses. Science (New York, N.Y.). 326: 257-63. PMID 19729616 DOI: 10.1126/Science.1179050  0.348
2009 Kim HD, Shay T, O'Shea EK, Regev A. Transcriptional regulatory circuits: predicting numbers from alphabets. Science (New York, N.Y.). 325: 429-32. PMID 19628860 DOI: 10.1126/Science.1171347  0.318
2009 Shay T, Lambiv WL, Reiner-Benaim A, Hegi ME, Domany E. Combining chromosomal arm status and significantly aberrant genomic locations reveals new cancer subtypes. Cancer Informatics. 7: 91-104. PMID 19352461 DOI: 10.4137/Cin.S2144  0.512
2008 Murat A, Migliavacca E, Gorlia T, Lambiv WL, Shay T, Hamou MF, de Tribolet N, Regli L, Wick W, Kouwenhoven MC, Hainfellner JA, Heppner FL, Dietrich PY, Zimmer Y, Cairncross JG, et al. Stem cell-related "self-renewal" signature and high epidermal growth factor receptor expression associated with resistance to concomitant chemoradiotherapy in glioblastoma. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 26: 3015-24. PMID 18565887 DOI: 10.1200/Jco.2007.15.7164  0.55
2008 Naffar-Abu-Amara S, Shay T, Galun M, Cohen N, Isakoff SJ, Kam Z, Geiger B. Identification of novel pro-migratory, cancer-associated genes using quantitative, microscopy-based screening. Plos One. 3: e1457. PMID 18213366 DOI: 10.1371/Journal.Pone.0001457  0.381
2007 Katz M, Amit I, Citri A, Shay T, Carvalho S, Lavi S, Milanezi F, Lyass L, Amariglio N, Jacob-Hirsch J, Ben-Chetrit N, Tarcic G, Lindzen M, Avraham R, Liao YC, et al. A reciprocal tensin-3-cten switch mediates EGF-driven mammary cell migration. Nature Cell Biology. 9: 961-9. PMID 17643115 DOI: 10.1038/Ncb1622  0.342
2007 Fainaru O, Shay T, Hantisteanu S, Goldenberg D, Domany E, Groner Y. TGFbeta-dependent gene expression profile during maturation of dendritic cells. Genes and Immunity. 8: 239-44. PMID 17330136 DOI: 10.1038/Sj.Gene.6364380  0.538
2007 Amit I, Citri A, Shay T, Lu Y, Katz M, Zhang F, Tarcic G, Siwak D, Lahad J, Jacob-Hirsch J, Amariglio N, Vaisman N, Segal E, Rechavi G, Alon U, et al. A module of negative feedback regulators defines growth factor signaling. Nature Genetics. 39: 503-12. PMID 17322878 DOI: 10.1038/Ng1987  0.566
2007 Hegi M, Migliavacca E, Gorlia T, Lambiv W, Shay T, Domany E, Delorenzi M, Stupp R, Murat A. 114 INVITED Malignant glioma: molecular pathways, mechanisms of disease and resistance to chemoradiotherapy European Journal of Cancer Supplements. 5: 31-32. DOI: 10.1016/S1359-6349(07)70228-8  0.49
2006 Murat A, Migliavacca E, Shay T, Stupp R, Domany E, Delorenzi M, Hegi ME. 24 Molecular profiles of gliomas, mechanistic insights and associations with outcome Radiotherapy and Oncology. 78. DOI: 10.1016/S0167-8140(06)80518-9  0.477
2004 Murat A, Migliavacca E, Shay T, Weller M, Kros J, Marosi C, Janzer R, Domany E, Delorenzi M, Hegi M. 654 Gene expression profiling of human glioblastoma. A translational research study to the randomized trial EORTC 26981/NCIC CE.3 testing radiotherapy ± temozolomide European Journal of Cancer Supplements. 2: 197. DOI: 10.1016/S1359-6349(04)80662-1  0.502
2004 Hegi M, Murat A, Migliavacca E, Shay T, Diserens AC, Hamou MF, Weller M, Kros J, Hainfellner J, Janzer R, Cairncross G, Descombes P, Tribolet ND, Delorenzi M, Domany E, et al. Établissement de profils moléculaires de glioblastomes. Étude transversale dans le cadre d’une étude clinique randomisée de l’organisation européenne de recherche et traitement du cancer (EORTC) et du National Cancer Institute du Canada (NCIC) qui avait pour but de tester l’addition de temozolomide à la radiothérapie Neurochirurgie. 50: 575. DOI: 10.1016/S0028-3770(04)98358-0  0.452
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