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Zachary M. James, Ph.D. - Publications

Affiliations: 
2013 Biochemistry, Molecular Bio, and Biophysics University of Minnesota, Twin Cities, Minneapolis, MN 
Area:
Biochemistry
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29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Martin PD, James ZM, Thomas DD. Effect of Phosphorylation on Interactions between Transmembrane Domains of SERCA and Phospholamban. Biophysical Journal. 114: 2573-2583. PMID 29874608 DOI: 10.1016/J.Bpj.2018.04.035  0.652
2018 Dai G, James ZM, Zagotta WN. Dynamic rearrangement of the intrinsic ligand regulates KCNH potassium channels. The Journal of General Physiology. PMID 29567795 DOI: 10.1085/Jgp.201711989  0.323
2017 Borst AJ, James ZM, Zagotta WN, Ginsberg M, Rey FA, DiMaio F, Backovic M, Veesler D. The Therapeutic Antibody LM609 Selectively Inhibits Ligand Binding to Human αVβ3 Integrin via Steric Hindrance. Structure (London, England : 1993). PMID 29033288 DOI: 10.1016/J.Str.2017.09.007  0.364
2017 James ZM, Borst AJ, Haitin Y, Frenz B, DiMaio F, Zagotta WN, Veesler D. CryoEM structure of a prokaryotic cyclic nucleotide-gated ion channel. Proceedings of the National Academy of Sciences of the United States of America. PMID 28396445 DOI: 10.1073/Pnas.1700248114  0.317
2017 James ZM, Evans EG, Zagotta WN. Spectroscopic Studies of a Bacterial Cyclic Nucleotide-Gated Ion Channel Biophysical Journal. 112: 40a. DOI: 10.1016/J.Bpj.2016.11.254  0.371
2016 McCaffrey JE, James ZM, Karim CB, Svensson B, Martin PD, Thomas DD. Structural Topology of SERCA-PLB Complex in Oriented Lipid Bicelles Detected by Multifrequency EPR Biophysical Journal. 110: 151a. DOI: 10.1016/J.Bpj.2015.11.851  0.614
2015 McCaffrey JE, James ZM, Svensson B, Binder BP, Thomas DD. A bifunctional spin label reports the structural topology of phospholamban in magnetically-aligned bicelles. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 262: 50-56. PMID 26720587 DOI: 10.1016/J.Jmr.2015.12.005  0.622
2015 Karim CB, Michel Espinoza-Fonseca L, James ZM, Hanse EA, Gaynes JS, Thomas DD, Kelekar A. Erratum: Structural Mechanism for Regulation of Bcl-2 protein Noxa by phosphorylation. Scientific Reports. 5: 15872. PMID 26513659 DOI: 10.1038/Srep15872  0.536
2015 Karim CB, Michel Espinoza-Fonseca L, James ZM, Hanse EA, Gaynes JS, Thomas DD, Kelekar A. Structural Mechanism for Regulation of Bcl-2 protein Noxa by phosphorylation. Scientific Reports. 5: 14557. PMID 26411306 DOI: 10.1038/Srep14557  0.629
2015 McCaffrey JE, James ZM, Thomas DD. Optimization of bicelle lipid composition and temperature for EPR spectroscopy of aligned membranes. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 250: 71-5. PMID 25514061 DOI: 10.1016/J.Jmr.2014.09.026  0.487
2015 Martin PD, James ZM, McCaffrey JE, Thomas DD. EPR Accessibility Measurements of the SERCA-PLB Complex using Site-Directed Spin Labeling Biophysical Journal. 108: 146a. DOI: 10.1016/J.Bpj.2014.11.808  0.577
2015 Svensson B, Dong X, Petersen KJ, James ZM, McCaffrey JE, Young HS, Thomas DD. Using Molecular Dynamics Simulations to Interpret Fluorescence and EPR Data on Labeled SERCA and Phospholamban Biophysical Journal. 108: 131a. DOI: 10.1016/J.Bpj.2014.11.729  0.701
2014 Ablorh NA, Dong X, James ZM, Xiong Q, Zhang J, Thomas DD, Karim CB. Synthetic phosphopeptides enable quantitation of the content and function of the four phosphorylation states of phospholamban in cardiac muscle. The Journal of Biological Chemistry. 289: 29397-405. PMID 25190804 DOI: 10.1074/Jbc.M114.556621  0.693
2014 Lewis AK, James ZM, McCaffrey JE, Braun AR, Karim CB, Thomas DD, Sachs JN. Open and closed conformations of the isolated transmembrane domain of death receptor 5 support a new model of activation. Biophysical Journal. 106: L21-4. PMID 24655519 DOI: 10.1016/J.Bpj.2014.01.044  0.445
2014 Colson BA, James ZM, Klein JC, Thomas DD. Structural Dynamics of Cardiac Myosin Binding Protein-C and its Myofilament Binding Partners, Detected by Site-Directed Spectroscopy Biophysical Journal. 106: 162a. DOI: 10.1016/J.Bpj.2013.11.923  0.746
2014 James ZM, McCaffrey JE, Torgersen KD, Karim CB, Thomas DD. Phosphorylation Alters the Transmembrane Binding Interface Between Phospholamban and SERCA Biophysical Journal. 106: 585a-586a. DOI: 10.1016/J.Bpj.2013.11.3244  0.809
2014 Ablorh ND, Dong X, James ZM, Langer HR, Thomas DD, Karim CB. Distinct Functional Effects of Phospholamban Phosphorylation States Biophysical Journal. 106: 585a. DOI: 10.1016/J.Bpj.2013.11.3243  0.71
2014 McCaffrey JE, James ZM, Karim CB, Thomas DD. Multifrequency EPR Detects Orientation of Calcium Transport Proteins in Lipid Bicelles Biophysical Journal. 106: 584a. DOI: 10.1016/J.Bpj.2013.11.3237  0.635
2013 McCaffrey JE, James ZM, Karim CB, Thomas DD. Orientation of Phospholamban in Lipid Bicelles Detected by Electron Paramagnetic Resonance Biophysical Journal. 104: 299a. DOI: 10.1016/J.Bpj.2012.11.1667  0.676
2013 James ZM, McCaffrey JE, Karim CB, Thomas DD. EPR Detects Changes in the Transmembrane Region of the SERCA-Phospholamban Complex upon Ser16 Phosphorylation Biophysical Journal. 104: 299a. DOI: 10.1016/J.Bpj.2012.11.1666  0.667
2013 Colson BA, James ZM, Thomas DD. Structural Dynamics of Actin-Myosin Bound and Unbound States of Cardiac Myosin Binding Protein-C Detected by Dipolar EPR Biophysical Journal. 104: 187a. DOI: 10.1016/J.Bpj.2012.11.1054  0.595
2012 James ZM, McCaffrey JE, Torgersen KD, Karim CB, Thomas DD. Protein-protein interactions in calcium transport regulation probed by saturation transfer electron paramagnetic resonance. Biophysical Journal. 103: 1370-8. PMID 22995510 DOI: 10.1016/J.Bpj.2012.08.032  0.803
2012 Li J, James ZM, Dong X, Karim CB, Thomas DD. Structural and functional dynamics of an integral membrane protein complex modulated by lipid headgroup charge. Journal of Molecular Biology. 418: 379-89. PMID 22381409 DOI: 10.1016/J.Jmb.2012.02.011  0.709
2012 McCaffrey JE, James ZM, Torgersen KD, Karim CB, Howard EC, Thomas DD. Structural Dynamics of Calcium Transport Proteins Detected by Saturation Transfer Electron Paramagnetic Resonance Biophysical Journal. 102: 709a. DOI: 10.1016/J.Bpj.2011.11.3846  0.8
2011 Lin AY, Prochniewicz E, James ZM, Svensson B, Thomas DD. Large-scale opening of utrophin's tandem calponin homology (CH) domains upon actin binding by an induced-fit mechanism. Proceedings of the National Academy of Sciences of the United States of America. 108: 12729-33. PMID 21768337 DOI: 10.1073/Pnas.1106453108  0.782
2011 James ZM, Torgersen KD, Karim CB, Thomas DD. Characterizing the Phospholamban-SERCA Complex by Pulsed EPR Spectroscopy Biophysical Journal. 100: 466a. DOI: 10.1016/J.Bpj.2010.12.2737  0.794
2010 James ZM, Torgersen KD, Karim C, Thomas DD. Structure and Dynamics of the Phospholamban-SERCA Complex Probed by Site-Directed EPR Spectroscopy Biophysical Journal. 98: 171a. DOI: 10.1016/J.Bpj.2009.12.920  0.806
2009 James ZM, Torgersen KD, Karim C, Thomas DD. Structural Dynamics Of The Phospholamban-SERCA Complex By Site-Directed EPR Spectroscopy Biophysical Journal. 96: 144a. DOI: 10.1016/J.Bpj.2008.12.643  0.802
2009 James ZM, Torgersen KD, Thompson A, Huseby M, Thomas DD. Crystalline Spin-Labeled Hemoglobin as a Model to Compare Distances Measured by DEER Spectroscopy and X-Ray Crystallography Biophysical Journal. 96: 309a. DOI: 10.1016/J.Bpj.2008.12.1543  0.762
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