Marcus B. Smolka, PhD - Related publications

Cornell University, Ithaca, NY, United States 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Silva GLA, Tosi LRO, McCulloch R, Black JA. Unpicking the Roles of DNA Damage Protein Kinases in Trypanosomatids. Frontiers in Cell and Developmental Biology. 9: 636615. PMID 34422791 DOI: 10.3389/fcell.2021.636615   
2021 Yoshida K, Fujita M. DNA damage responses that enhance resilience to replication stress. Cellular and Molecular Life Sciences : Cmls. PMID 34463774 DOI: 10.1007/s00018-021-03926-3   
2021 Dhingra N, Zhao X. Advances in SUMO-based regulation of homologous recombination. Current Opinion in Genetics & Development. 71: 114-119. PMID 34333341 DOI: 10.1016/j.gde.2021.07.007   
2021 Hinds JW, Ditano JP, Eastman A. Inhibition of Protein Synthesis Induced by CHK1 Inhibitors Discriminates Sensitive from Resistant Cancer Cells. Acs Pharmacology & Translational Science. 4: 1449-1461. PMID 34423276 DOI: 10.1021/acsptsci.1c00150   
2021 Lee SY, Kim JJ, Miller KM. Bromodomain proteins: protectors against endogenous DNA damage and facilitators of genome integrity. Experimental & Molecular Medicine. PMID 34548613 DOI: 10.1038/s12276-021-00673-0   
2021 Berger M, Wortmann L, Buchgraber P, Lücking U, Zitzmann-Kolbe S, Wengner AM, Bader B, Bömer U, Briem H, Eis K, Rehwinkel H, Bartels F, Moosmayer D, Eberspächer U, Lienau P, et al. BAY-8400: A Novel Potent and Selective DNA-PK Inhibitor which Shows Synergistic Efficacy in Combination with Targeted Alpha Therapies. Journal of Medicinal Chemistry. PMID 34428039 DOI: 10.1021/acs.jmedchem.1c00762   
2021 Balana AT, Mukherjee A, Nagpal H, Moon SP, Fierz B, Vasquez KM, Pratt MR. O-GlcNAcylation of High Mobility Group Box 1 (HMGB1) Alters Its DNA Binding and DNA Damage Processing Activities. Journal of the American Chemical Society. PMID 34546745 DOI: 10.1021/jacs.1c06192   
2021 Mir US, Bhat A, Mushtaq A, Pandita S, Altaf M, Pandita TK. Role of histone acetyltransferases MOF and Tip60 in genome stability. Dna Repair. 107: 103205. PMID 34399315 DOI: 10.1016/j.dnarep.2021.103205   
2021 Serra-Cardona A, Yu C, Zhang X, Hua X, Yao Y, Zhou J, Gan H, Zhang Z. A mechanism for Rad53 to couple leading- and lagging-strand DNA synthesis under replication stress in budding yeast. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34531325 DOI: 10.1073/pnas.2109334118   
2021 Foo TK, Vincelli G, Huselid E, Her J, Zheng H, Simhadri S, Wang M, Huo Y, Li T, Yu X, Li H, Zhao W, Bunting SF, Xia B. ATR/ATM-mediated phosphorylation of BRCA1 T1394 promotes homologous recombinational repair and G2/M checkpoint maintenance. Cancer Research. PMID 34301763 DOI: 10.1158/0008-5472.CAN-20-2723   
2021 Ge J, Ngo LP, Kaushal S, Tay IJ, Thadhani E, Kay JE, Mazzucato P, Chow DN, Fessler JL, Weingeist DM, Sobol RW, Samson LD, Floyd SR, Engelward BP. CometChip enables parallel analysis of multiple DNA repair activities. Dna Repair. 106: 103176. PMID 34365116 DOI: 10.1016/j.dnarep.2021.103176   
2021 Zannoni A, Pelliciari S, Musiani F, Chiappori F, Roncarati D, Scarlato V. Definition of the Binding Architecture to a Target Promoter of HP1043, the Essential Master Regulator of . International Journal of Molecular Sciences. 22. PMID 34360614 DOI: 10.3390/ijms22157848   
2021 Dragojevic S, Jianxiong J, Singh PK, Connors MA, Mutter RW, Lester SC, Talele SM, Zhang W, Carlson BL, Remmes NB, Park SS, Elmquist WF, Krishnan S, Tryggestad EJ, Sarkaria JN. Preclinical risk evaluation of normal tissue injury with novel radiosensitizers. International Journal of Radiation Oncology, Biology, Physics. PMID 34400266 DOI: 10.1016/j.ijrobp.2021.08.003   
2021 Roux P, Salort D, Xu Z. Adaptation to DNA damage as a bet-hedging mechanism in a fluctuating environment. Royal Society Open Science. 8: 210460. PMID 34457341 DOI: 10.1098/rsos.210460   
2021 Statello L, Ali MM, Reischl S, Mahale S, Kosalai ST, Huarte M, Kanduri C. The DNA damage inducible lncRNA SCAT7 regulates genomic integrity and topoisomerase 1 turnover in lung adenocarcinoma. Nar Cancer. 3: zcab002. PMID 34316698 DOI: 10.1093/narcan/zcab002   
2021 Chaplin AK, Hardwick SW, Stavridi AK, Buehl CJ, Goff NJ, Ropars V, Liang S, De Oliveira TM, Chirgadze DY, Meek K, Charbonnier JB, Blundell TL. Cryo-EM of NHEJ supercomplexes provides insights into DNA repair. Molecular Cell. PMID 34352203 DOI: 10.1016/j.molcel.2021.07.005   
2021 Muhseena N K, Mathukkada S, Das SP, Laha S. The repair gene - a potential oncogene. Oncology Reviews. 15: 519. PMID 34322202 DOI: 10.4081/oncol.2021.519   
2021 Fernandez A, O'Leary C, O'Byrne KJ, Burgess J, Richard DJ, Suraweera A. Epigenetic Mechanisms in DNA Double Strand Break Repair: A Clinical Review. Frontiers in Molecular Biosciences. 8: 685440. PMID 34307454 DOI: 10.3389/fmolb.2021.685440   
2021 Xuan J, Gitareja K, Brajanovski N, Sanij E. Harnessing the Nucleolar DNA Damage Response in Cancer Therapy. Genes. 12. PMID 34440328 DOI: 10.3390/genes12081156   
2021 Tse DH, Becker NA, Young RT, Olson WK, Peters JP, Schwab TL, Clark KJ, Maher LJ. Designed architectural proteins that tune DNA looping in bacteria. Nucleic Acids Research. PMID 34478548 DOI: 10.1093/nar/gkab759   
2021 Bai L, Yang G, Qin Z, Lyu J, Wang Y, Feng J, Liu M, Gong T, Li X, Li Z, Li J, Qin J, Yang W, Ding C. Proteome-Wide Profiling of Readers for DNA Modification. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). e2101426. PMID 34351703 DOI: 10.1002/advs.202101426   
2021 Wiegmans AP, Ward A, Ivanova E, Duijf PHG, Adams MN, Najib IM, Van Oosterhout R, Sadowski MC, Kelly G, Morrical SW, O'Byrne K, Lee JS, Richard DJ. Genome instability and pressure on non-homologous end joining drives chemotherapy resistance via a DNA repair crisis switch in triple negative breast cancer. Nar Cancer. 3: zcab022. PMID 34316709 DOI: 10.1093/narcan/zcab022   
2021 Liu J, Li J, Sun Z, Duan Y, Wang F, Wei G, Yang JH. Bcl-2-associated transcription factor 1 Ser290 phosphorylation mediates DNA damage response and regulates radiosensitivity in gastric cancer. Journal of Translational Medicine. 19: 339. PMID 34372878 DOI: 10.1186/s12967-021-03004-z   
2021 Simoneau A, Zou L. An extending ATR-CHK1 circuitry: the replication stress response and beyond. Current Opinion in Genetics & Development. 71: 92-98. PMID 34329853 DOI: 10.1016/j.gde.2021.07.003   
2021 Lu R, Zhang H, Jiang YN, Wang ZQ, Sun L, Zhou ZW. Post-Translational Modification of MRE11: Its Implication in DDR and Diseases. Genes. 12. PMID 34440334 DOI: 10.3390/genes12081158   
2021 Ahn J, Heo S, Lee J, Bang D. Introduction to Single-Cell DNA Methylation Profiling Methods. Biomolecules. 11. PMID 34356635 DOI: 10.3390/biom11071013   
2021 Misra S, Ghosh G, Chowdhury SG, Karmakar P. Non-canonical function of nuclear PTEN and its implication on tumorigenesis. Dna Repair. 107: 103197. PMID 34359000 DOI: 10.1016/j.dnarep.2021.103197   
2021 Zhang J, Ghadermarzi S, Katuwawala A, Kurgan L. DNAgenie: accurate prediction of DNA-type-specific binding residues in protein sequences. Briefings in Bioinformatics. PMID 34415020 DOI: 10.1093/bib/bbab336   
2021 Yang T, Liu X, Kumar SK, Jin F, Dai Y. Decoding DNA methylation in epigenetics of multiple myeloma. Blood Reviews. 100872. PMID 34384602 DOI: 10.1016/j.blre.2021.100872   
2021 Liu J, Liu L, He J, Xu Y, Wang Y. Multi-omic analysis of altered transcriptome and epigenetic signatures in the UV-induced DNA damage response. Dna Repair. 106: 103172. PMID 34298489 DOI: 10.1016/j.dnarep.2021.103172   
2021 Branzei D, Szakal B. DNA helicases in homologous recombination repair. Current Opinion in Genetics & Development. 71: 27-33. PMID 34271541 DOI: 10.1016/j.gde.2021.06.009   
2021 Nickoloff JA, Taylor L, Sharma N, Kato TA. Exploiting DNA repair pathways for tumor sensitization, mitigation of resistance, and normal tissue protection in radiotherapy. Cancer Drug Resistance (Alhambra, Calif.). 4: 244-263. PMID 34337349 DOI: 10.20517/cdr.2020.89   
2021 Ferraz RAC, Lopes ALG, da Silva JAF, Moreira DFV, Ferreira MJN, de Almeida Coimbra SV. DNA-protein interaction studies: a historical and comparative analysis. Plant Methods. 17: 82. PMID 34301293 DOI: 10.1186/s13007-021-00780-z   
2021 Ferraz RAC, Lopes ALG, da Silva JAF, Moreira DFV, Ferreira MJN, de Almeida Coimbra SV. DNA-protein interaction studies: a historical and comparative analysis. Plant Methods. 17: 82. PMID 34301293 DOI: 10.1186/s13007-021-00780-z   
2021 Piett CG, Pecen TJ, Laverty DJ, Nagel ZD. Large-scale preparation of fluorescence multiplex host cell reactivation (FM-HCR) reporters. Nature Protocols. PMID 34363069 DOI: 10.1038/s41596-021-00577-3   
2021 Rose E, Moraes A, Shiroma T, Nitz N, Rosa AC, Pratesi R, Hagström L, de Carvalho JL, Hecht M. Host DNA repair response to oxidative damage is modulated by Trypanosoma cruzi in a strain-dependent manner. Acta Tropica. 106127. PMID 34509459 DOI: 10.1016/j.actatropica.2021.106127   
2021 Reitz D, Chan YL, Bishop DK. How strand exchange protein function benefits from ATP hydrolysis. Current Opinion in Genetics & Development. 71: 120-128. PMID 34343922 DOI: 10.1016/j.gde.2021.06.016   
2021 Zhao F, Kim W, Gao H, Liu C, Zhang Y, Chen Y, Deng M, Zhou Q, Huang J, Hu Q, Chen SH, Nowsheen S, Kloeber JA, Qin B, Yin P, et al. ASTE1 promotes shieldin-complex-mediated DNA repair by attenuating end resection. Nature Cell Biology. PMID 34354233 DOI: 10.1038/s41556-021-00723-9   
2021 Chen BR, Wang Y, Tubbs A, Zong D, Fowler FC, Zolnerowich N, Wu W, Bennett A, Chen CC, Feng W, Nussenzweig A, Tyler JK, Sleckman BP. LIN37-DREAM prevents DNA end resection and homologous recombination at DNA double-strand breaks in quiescent cells. Elife. 10. PMID 34477552 DOI: 10.7554/eLife.68466   
2021 Dai Y, Yuan BF, Feng YQ. Quantification and mapping of DNA modifications. Rsc Chemical Biology. 2: 1096-1114. PMID 34458826 DOI: 10.1039/d1cb00022e   
2021 Chen X, Liu L, Deng Y, Zheng Z, Deng Z, Zhang J, Li J, Liang M, Zhou X, Tan W, Yang H, Neckers LM, Zou F. Hsp90 Inhibitor STA9090 Sensitizes Hepatocellular Carcinoma to Hyperthermia-Induced DNA Damage by Suppressing DNA-PKcs Protein Stability and mRNA Transcription. Molecular Cancer Therapeutics. PMID 34376581 DOI: 10.1158/1535-7163.MCT-21-0215   
2021 Dhar GA, Saha S, Mitra P, Nag Chaudhuri R. DNA methylation and regulation of gene expression: Guardian of our health. The Nucleus : An International Journal of Cytology and Allied Topics. 1-12. PMID 34421129 DOI: 10.1007/s13237-021-00367-y   
2021 Han P, Ma Y, Fu Z, Guo Z, Xie J, Wu Y, Yuan YJ. A DNA Inversion System in Eukaryotes Established via Laboratory Evolution. Acs Synthetic Biology. PMID 34420293 DOI: 10.1021/acssynbio.1c00132   
2021 Cheng SM, Shieh MC, Lin TY, Cheung CHA. The "Dark Side" of autophagy on the maintenance of genome stability: Does it really exist during excessive activation? Journal of Cellular Physiology. PMID 34406646 DOI: 10.1002/jcp.30555   
2021 Wu B, Xi S. Bioinformatics analysis of the transcriptional expression of minichromosome maintenance proteins as potential indicators of survival in patients with cervical cancer. Bmc Cancer. 21: 928. PMID 34404366 DOI: 10.1186/s12885-021-08674-y   
2021 Fukuda D, Pham PT, Sata M. Emerging Roles of the Innate Immune System Regulated by DNA Sensors in the Development of Vascular and Metabolic Diseases. Journal of Atherosclerosis and Thrombosis. PMID 34248111 DOI: 10.5551/jat.RV17059   
2021 Polleys EJ, Freudenreich CH. Homologous recombination within repetitive DNA. Current Opinion in Genetics & Development. 71: 143-153. PMID 34464817 DOI: 10.1016/j.gde.2021.08.005   
2021 Jung KW, Jung JH, Park HY. Functional Roles of Homologous Recombination and Non-Homologous End Joining in DNA Damage Response and Microevolution in . Journal of Fungi (Basel, Switzerland). 7. PMID 34356945 DOI: 10.3390/jof7070566   
2021 Clarke RS, Ha KP, Edwards AM. RexAB promotes the survival of exposed to multiple classes of antibiotics. Antimicrobial Agents and Chemotherapy. AAC0059421. PMID 34310219 DOI: 10.1128/AAC.00594-21   
2021 Hu W, Wang Y, Yang B, Lin C, Yu H, Liu G, Deng Z, Ou HY, He X. Bacterial YedK represses plasmid DNA replication and transformation through its DNA single-strand binding activity. Microbiological Research. 252: 126852. PMID 34454309 DOI: 10.1016/j.micres.2021.126852