Nancy Hopkins - Publications

Affiliations: 
Massachusetts Institute of Technology, Cambridge, MA, United States 

59 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2013 Zhang G, Hoersch S, Amsterdam A, Whittaker CA, Beert E, Catchen JM, Farrington S, Postlethwait JH, Legius E, Hopkins N, Lees JA. Comparative oncogenomic analysis of copy number alterations in human and zebrafish tumors enables cancer driver discovery. Plos Genetics. 9: e1003734. PMID 24009526 DOI: 10.1371/Journal.Pgen.1003734  0.622
2010 Zhang G, Hoersch S, Amsterdam A, Whittaker CA, Lees JA, Hopkins N. Highly aneuploid zebrafish malignant peripheral nerve sheath tumors have genetic alterations similar to human cancers. Proceedings of the National Academy of Sciences of the United States of America. 107: 16940-5. PMID 20837522 DOI: 10.1073/Pnas.1011548107  0.619
2010 Barresi MJ, Burton S, Dipietrantonio K, Amsterdam A, Hopkins N, Karlstrom RO. Essential genes for astroglial development and axon pathfinding during zebrafish embryogenesis. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 239: 2603-18. PMID 20806318 DOI: 10.1002/Dvdy.22393  0.312
2010 Sansam CL, Cruz NM, Danielian PS, Amsterdam A, Lau ML, Hopkins N, Lees JA. A vertebrate gene, ticrr, is an essential checkpoint and replication regulator. Genes & Development. 24: 183-94. PMID 20080954 DOI: 10.1101/Gad.1860310  0.721
2009 Amsterdam A, Lai K, Komisarczuk AZ, Becker TS, Bronson RT, Hopkins N, Lees JA. Zebrafish Hagoromo mutants up-regulate fgf8 postembryonically and develop neuroblastoma. Molecular Cancer Research : McR. 7: 841-50. PMID 19531571 DOI: 10.1158/1541-7786.Mcr-08-0555  0.633
2009 Lai K, Amsterdam A, Farrington S, Bronson RT, Hopkins N, Lees JA. Many ribosomal protein mutations are associated with growth impairment and tumor predisposition in zebrafish. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 238: 76-85. PMID 19097187 DOI: 10.1002/Dvdy.21815  0.605
2009 Chong S, Amsterdam A, Ang H, Yang H, Hopkins N, Jiang Y. Zebrafish Nicastrin is required for mid- and hindbrain development Developmental Biology. 331: 466. DOI: 10.1016/J.Ydbio.2009.05.299  0.3
2008 MacInnes AW, Amsterdam A, Whittaker CA, Hopkins N, Lees JA. Loss of p53 synthesis in zebrafish tumors with ribosomal protein gene mutations. Proceedings of the National Academy of Sciences of the United States of America. 105: 10408-13. PMID 18641120 DOI: 10.1073/Pnas.0805036105  0.617
2007 Carney TJ, von der Hardt S, Sonntag C, Amsterdam A, Topczewski J, Hopkins N, Hammerschmidt M. Inactivation of serine protease Matriptase1a by its inhibitor Hai1 is required for epithelial integrity of the zebrafish epidermis. Development (Cambridge, England). 134: 3461-71. PMID 17728346 DOI: 10.1242/Dev.004556  0.319
2007 DiPietrantonio KM, Ortman A, Karlstrom R, Amsterdam A, Hopkins N, Barresi M. The role of the EG5 kinesin in regulating radial glial cell number Developmental Biology. 306: 329-330. DOI: 10.1016/J.Ydbio.2007.03.155  0.301
2006 Sansam CL, Shepard JL, Lai K, Ianari A, Danielian PS, Amsterdam A, Hopkins N, Lees JA. DTL/CDT2 is essential for both CDT1 regulation and the early G2/M checkpoint. Genes & Development. 20: 3117-29. PMID 17085480 DOI: 10.1101/Gad.1482106  0.724
2006 Amsterdam A, Hopkins N. Mutagenesis strategies in zebrafish for identifying genes involved in development and disease. Trends in Genetics : Tig. 22: 473-8. PMID 16844256 DOI: 10.1016/J.Tig.2006.06.011  0.391
2006 Nissen RM, Amsterdam A, Hopkins N. A zebrafish screen for craniofacial mutants identifies wdr68 as a highly conserved gene required for endothelin-1 expression. Bmc Developmental Biology. 6: 28. PMID 16759393 DOI: 10.1186/1471-213X-6-28  0.426
2006 Rhodes J, Amsterdam A, Ho K, Heinrichs S, Kanki JP, O’Neil JE, Gutierrez A, McKenna K, Feng H, Fleming M, Neuberg D, Galinsky I, Stone RM, Hopkins N, Look AT. Emi1 Is Required for Normal Cell Cycle Progression in Zebrafish Myelopoiesis and Likely Functions as a Haploinsufficient Tumor Suppressor on Chromosome 6q in Human Leukmias. Blood. 108: 1405-1405. DOI: 10.1182/Blood.V108.11.1405.1405  0.491
2005 Hong JH, Hwang ES, McManus MT, Amsterdam A, Tian Y, Kalmukova R, Mueller E, Benjamin T, Spiegelman BM, Sharp PA, Hopkins N, Yaffe MB. TAZ, a transcriptional modulator of mesenchymal stem cell differentiation. Science (New York, N.Y.). 309: 1074-8. PMID 16099986 DOI: 10.1126/Science.1110955  0.317
2005 Sadler KC, Amsterdam A, Soroka C, Boyer J, Hopkins N. A genetic screen in zebrafish identifies the mutants vps18, nf2 and foie gras as models of liver disease. Development (Cambridge, England). 132: 3561-72. PMID 16000385 DOI: 10.1242/Dev.01918  0.397
2005 Gross JM, Perkins BD, Amsterdam A, Egaña A, Darland T, Matsui JI, Sciascia S, Hopkins N, Dowling JE. Identification of zebrafish insertional mutants with defects in visual system development and function. Genetics. 170: 245-61. PMID 15716491 DOI: 10.1534/Genetics.104.039727  0.362
2005 Rhodes J, Amsterdam A, Ho K, Kanki JP, Hopkins N, Look AT. A Role for fbxo5 in Zebrafish Myelopoiesis. Blood. 106: 3608-3608. DOI: 10.1182/Blood.V106.11.3608.3608  0.451
2004 Sun Z, Amsterdam A, Pazour GJ, Cole DG, Miller MS, Hopkins N. A genetic screen in zebrafish identifies cilia genes as a principal cause of cystic kidney. Development (Cambridge, England). 131: 4085-93. PMID 15269167 DOI: 10.1242/Dev.01240  0.408
2004 Amsterdam A, Nissen RM, Sun Z, Swindell EC, Farrington S, Hopkins N. Identification of 315 genes essential for early zebrafish development. Proceedings of the National Academy of Sciences of the United States of America. 101: 12792-7. PMID 15256591 DOI: 10.1073/Pnas.0403929101  0.459
2004 Amsterdam A, Sadler KC, Lai K, Farrington S, Bronson RT, Lees JA, Hopkins N. Many ribosomal protein genes are cancer genes in zebrafish. Plos Biology. 2: E139. PMID 15138505 DOI: 10.1371/Journal.Pbio.0020139  0.637
2003 Nissen RM, Yan J, Amsterdam A, Hopkins N, Burgess SM. Zebrafish foxi one modulates cellular responses to Fgf signaling required for the integrity of ear and jaw patterning Development. 130: 2543-2554. PMID 12702667 DOI: 10.1242/Dev.00455  0.379
2002 Golling G, Amsterdam A, Sun Z, Antonelli M, Maldonado E, Chen W, Burgess S, Haldi M, Artzt K, Farrington S, Lin SY, Nissen RM, Hopkins N. Insertional mutagenesis in zebrafish rapidly identifies genes essential for early vertebrate development Nature Genetics. 31: 135-140. PMID 12006978 DOI: 10.1038/Ng896  0.667
2002 Burgess S, Reim G, Chen W, Hopkins N, Brand M. The zebrafish spiel-ohne-grenzen (spg) gene encodes the POU domain protein Pou2 related to mammalian Oct4 and is essential for formation of the midbrain and hindbrain, and for pre-gastrula morphogenesis Development. 129: 905-916. PMID 11861474  0.632
2002 Chen W, Burgess S, Golling G, Amsterdam A, Hopkins N. High-throughput selection of retrovirus producer cell lines leads to markedly improved efficiency of germ line-transmissible insertions in zebra fish Journal of Virology. 76: 2192-2198. PMID 11836396 DOI: 10.1128/Jvi.76.5.2192-2198.2002  0.611
2001 Sun Z, Hopkins N. vhnf1, the MODY5 and familial GCKD-associated gene, regulates regional specification of the zebrafish gut, pronephros, and hindbrain. Genes & Development. 15: 3217-29. PMID 11731484 DOI: 10.1101/Gad946701  0.41
2000 Burgess S, Hopkins N. Use of pseudotyped retroviruses in zebrafish as genetic tags Methods in Enzymology. 327: 145-161. PMID 11044980 DOI: 10.1016/S0076-6879(00)27273-X  0.373
2000 Kawakami K, Amsterdam A, Shimoda N, Becker T, Mugg J, Shima A, Hopkins N. Proviral insertions in the zebrafish hagoromo gene, encoding an F-box/WD40-repeat protein, cause stripe pattern anomalies. Current Biology : Cb. 10: 463-6. PMID 10801422 DOI: 10.1016/S0960-9822(00)00444-9  0.423
2000 Talbot WS, Hopkins N. Zebrafish mutations and functional analysis of the vertebrate genome. Genes & Development. 14: 755-762. DOI: 10.1101/Gad.14.7.755  0.328
1999 Amsterdam A, Burgess S, Golling G, Chen W, Sun Z, Townsend K, Farrington S, Haldi M, Hopkins N. A large-scale insertional mutagenesis screen in zebrafish Genes and Development. 13: 2713-2724. PMID 10541557 DOI: 10.1101/Gad.13.20.2713  0.421
1998 Amsterdam A, Hopkins N. Chapter 5 Retrovirus-Mediated Insertional Mutagenesis in Zebrafish Methods in Cell Biology. 60: 87-98. PMID 9891332 DOI: 10.1016/S0091-679X(08)61895-6  0.436
1997 Amsterdam A, Yoon C, Allende M, Becker T, Kawakami K, Burgess S, Gaiano N, Hopkins N. Retrovirus-mediated insertional mutagenesis in zebrafish and identification of a molecular marker for embryonic germ cells. Cold Spring Harbor Symposia On Quantitative Biology. 62: 437-50. PMID 9598379 DOI: 10.1101/Sqb.1997.062.01.052  0.332
1997 Willett CE, Zapata AG, Hopkins N, Steiner LA. Expression of zebrafish rag genes during early development identifies the thymus Developmental Biology. 182: 331-341. PMID 9070331 DOI: 10.1006/Dbio.1996.8446  0.406
1996 Haffter P, Odenthal J, Mullins MC, Lin S, Farrell MJ, Vogelsang E, Haas F, Brand M, van Eeden FJ, Furutani-Seiki M, Granato M, Hammerschmidt M, Heisenberg CP, Jiang YJ, Kane DA, ... ... Hopkins N, et al. Mutations affecting pigmentation and shape of the adult zebrafish. Development Genes and Evolution. 206: 260-76. PMID 24173565 DOI: 10.1007/S004270050051  0.332
1996 Allende ML, Amsterdam A, Becker T, Kawakami K, Gaiano N, Hopkins N. Insertional mutagenesis in zebrafish identifies two novel genes, pescadillo and dead eye, essential for embryonic development. Genes & Development. 10: 3141-55. PMID 8985183 DOI: 10.1101/Gad.10.24.3141  0.432
1996 Gaiano N, Amsterdam A, Kawakami K, Allende M, Becker T, Hopkins N. Insertional mutagenesis and rapid cloning of essential genes in zebrafish. Nature. 383: 829-32. PMID 8893009 DOI: 10.1038/383829A0  0.445
1996 Gaiano N, Hopkins N. Introducing genes into zebrafish. Biochimica Et Biophysica Acta. 1288: O11-4. PMID 8764844 DOI: 10.1016/0304-419X(96)00017-0  0.363
1996 Gaiano N, Allende M, Amsterdam A, Kawakami K, Hopkins N. Highly efficient germ-line transmission of proviral insertions in zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 93: 7777-82. PMID 8755552 DOI: 10.1073/Pnas.93.15.7777  0.362
1996 Kawakami K, Hopkins N. Rapid identification of transgenic zebrafish. Trends in Genetics. 12: 9-10. PMID 8741852 DOI: 10.1016/S0168-9525(96)90083-9  0.302
1994 Lin S, Yang S, Hopkins N. lacZ Expression in Germline Transgenic Zebrafish Can Be Detected in Living Embryos Developmental Biology. 161: 77-83. PMID 8293887 DOI: 10.1006/Dbio.1994.1009  0.339
1994 Lin S, Gaiano N, Culp P, Burns JC, Friedmann T, Yee JK, Hopkins N. Integration and germ-line transmission of a pseudotyped retroviral vector in zebrafish. Science (New York, N.Y.). 265: 666-9. PMID 8036514 DOI: 10.1126/Science.8036514  0.384
1992 Rossant J, Hopkins N. Of fin and fur: mutational analysis of vertebrate embryonic development. Genes & Development. 6: 1-13. PMID 1730405 DOI: 10.1101/Gad.6.1.1  0.373
1992 Lin S, Long W, Chen J, Hopkins N. Production of germ-line chimeras in zebrafish by cell transplants from genetically pigmented to albino embryos. Proceedings of the National Academy of Sciences of the United States of America. 89: 4519-4523. PMID 1584786 DOI: 10.1073/Pnas.89.10.4519  0.325
1991 Hunter K, Housman D, Hopkins N. Isolation and characterization of irradiation fusion hybrids from mouse chromosome 1 for mapping Rmc-1, a gene encoding a cellular receptor for MCF class murine retroviruses. Somatic Cell and Molecular Genetics. 17: 169-83. PMID 2011795 DOI: 10.1007/Bf01232974  0.308
1991 Culp P, Nüsslein-Volhard C, Hopkins N. High-frequency germ-line transmission of plasmid DNA sequences injected into fertilized zebrafish eggs. Proceedings of the National Academy of Sciences of the United States of America. 88: 7953-7. PMID 1910170 DOI: 10.1073/Pnas.88.18.7953  0.344
1990 Speck NA, Renjifo B, Golemis E, Fredrickson TN, Hartley JW, Hopkins N. Mutation of the core or adjacent LVb elements of the Moloney murine leukemia virus enhancer alters disease specificity. Genes & Development. 4: 233-42. PMID 2338244 DOI: 10.1101/Gad.4.2.233  0.353
1990 Renjifo B, Speck NA, Winandy S, Hopkins N, Li Y. cis-acting elements in the U3 region of a simian immunodeficiency virus. Journal of Virology. 64: 3130-4. PMID 2335831 DOI: 10.1128/Jvi.64.6.3130-3134.1990  0.339
1990 Speck NA, Renjifo B, Hopkins N. Point mutations in the Moloney murine leukemia virus enhancer identify a lymphoid-specific viral core motif and 1,3-phorbol myristate acetate-inducible element. Journal of Virology. 64: 543-50. PMID 2104942 DOI: 10.1128/Jvi.64.2.543-550.1990  0.359
1989 Golemis E, Li Y, Fredrickson TN, Hartley JW, Hopkins N. Distinct segments within the enhancer region collaborate to specify the type of leukemia induced by nondefective Friend and Moloney viruses. Journal of Virology. 63: 328-37. PMID 2783259 DOI: 10.1128/Jvi.63.1.328-337.1989  0.302
1989 Manley NR, O'Connell MA, Sharp PA, Hopkins N. Nuclear factors that bind to the enhancer region of nondefective Friend murine leukemia virus. Journal of Virology. 63: 4210-23. PMID 2778872 DOI: 10.1128/Jvi.63.10.4210-4223.1989  0.327
1987 Li Y, Golemis E, Hartley JW, Hopkins N. Disease specificity of nondefective Friend and Moloney murine leukemia viruses is controlled by a small number of nucleotides. Journal of Virology. 61: 693-700. PMID 3468264 DOI: 10.1128/Jvi.61.3.693-700.1987  0.324
1985 Holland CA, Hartley JW, Rowe WP, Hopkins N. At least four viral genes contribute to the leukemogenicity of murine retrovirus MCF 247 in AKR mice. Journal of Virology. 53: 158-65. PMID 2981335 DOI: 10.1128/Jvi.53.1.158-165.1985  0.351
1985 Holland CA, Wozney J, Chatis PA, Hopkins N, Hartley JW. Construction of recombinants between molecular clones of murine retrovirus MCF 247 and Akv: determinant of an in vitro host range property that maps in the long terminal repeat. Journal of Virology. 53: 152-7. PMID 2981334 DOI: 10.1128/Jvi.53.1.152-157.1985  0.351
1984 Li Y, Holland CA, Hartley JW, Hopkins N. Viral integration near c-myc in 10-20% of mcf 247-induced AKR lymphomas. Proceedings of the National Academy of Sciences of the United States of America. 81: 6808-11. PMID 6093121 DOI: 10.1073/Pnas.81.21.6808  0.323
1984 Chatis PA, Holland CA, Silver JE, Frederickson TN, Hopkins N, Hartley JW. A 3' end fragment encompassing the transcriptional enhancers of nondefective Friend virus confers erythroleukemogenicity on Moloney leukemia virus. Journal of Virology. 52: 248-54. PMID 6090701 DOI: 10.1128/Jvi.52.1.248-254.1984  0.334
1983 Chatis PA, Holland CA, Hartley JW, Rowe WP, Hopkins N. Role for the 3' end of the genome in determining disease specificity of Friend and Moloney murine leukemia viruses. Proceedings of the National Academy of Sciences of the United States of America. 80: 4408-11. PMID 6308622 DOI: 10.1073/Pnas.80.14.4408  0.358
1980 Rosner MR, Tung JS, Hopkins N, Robbins PW. Relationship of G(IX) antigen expression to the glycosylation of murine leukemia virus glycoprotein Proceedings of the National Academy of Sciences of the United States of America. 77: 6420-6424. PMID 6935656 DOI: 10.1073/Pnas.77.11.6420  0.35
1978 Donoghue DJ, Rothenberg E, Hopkins N, Baltimore D, Sharp PA. Heteroduplex analysis of the nonhomology region between Moloney MuLV and the dual host range derivative HIX virus. Cell. 14: 959-70. PMID 210960 DOI: 10.1016/0092-8674(78)90350-1  0.313
1978 Faller DV, Rommelaere J, Hopkins N. Large T1 oligonucleotides of Moloney leukemia virus missing in an env gene recombinant, HIX, are present on an intracellular 21S Moloney viral RNA species. Proceedings of the National Academy of Sciences of the United States of America. 75: 2964-8. PMID 96445 DOI: 10.1073/Pnas.75.6.2964  0.301
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