| Year |
Citation |
Score |
| 2024 |
Yoo D, Rhie A, Hebbar P, Antonacci F, Logsdon GA, Solar SJ, Antipov D, Pickett BD, Safonova Y, Montinaro F, Luo Y, Malukiewicz J, Storer JM, Lin J, Sequeira AN, ... ... Canzar S, et al. Complete sequencing of ape genomes. Biorxiv : the Preprint Server For Biology. PMID 39131277 DOI: 10.1101/2024.07.31.605654 |
0.597 |
|
| 2024 |
Greshnova A, Pál K, Martinez JFI, Canzar S, Makova KD. Transcript Isoform Diversity of Y Chromosome Ampliconic Genes of Great Apes Uncovered Using Long Reads and Telomere-to-Telomere Reference Genome Assemblies. Biorxiv : the Preprint Server For Biology. PMID 38617276 DOI: 10.1101/2024.04.02.587783 |
0.306 |
|
| 2020 |
Do VH, Elbassioni K, Canzar S. Sphetcher: Spherical Thresholding Improves Sketching of Single-Cell Transcriptomic Heterogeneity. Iscience. 23: 101126. PMID 32438285 DOI: 10.1016/J.Isci.2020.101126 |
0.33 |
|
| 2020 |
Chakraborty S, Canzar S, Marschall T, Schulz MH. Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 27: 330-341. PMID 32160036 DOI: 10.1089/Cmb.2019.0457 |
0.367 |
|
| 2019 |
Andreotti S, Canzar S. Guided Reconstruction of Full-Length Isoforms from Short Reads by CIDANE. Methods in Molecular Biology (Clifton, N.J.). 1870: 199-208. PMID 30539557 DOI: 10.1007/978-1-4939-8808-2_15 |
0.381 |
|
| 2018 |
Gonzales NM, Seo J, Hernandez Cordero AI, St Pierre CL, Gregory JS, Distler MG, Abney M, Canzar S, Lionikas A, Palmer AA. Genome wide association analysis in a mouse advanced intercross line. Nature Communications. 9: 5162. PMID 30514929 DOI: 10.1038/S41467-018-07642-8 |
0.326 |
|
| 2018 |
Sulakhe D, D'Souza M, Wang S, Balasubramanian S, Athri P, Xie B, Canzar S, Agam G, Gilliam TC, Maltsev N. Exploring the functional impact of alternative splicing on human protein isoforms using available annotation sources. Briefings in Bioinformatics. PMID 29931155 DOI: 10.1093/Bib/Bby047 |
0.378 |
|
| 2018 |
Kuang Z, Canzar S. Tracking Alternatively Spliced Isoforms from Long Reads by SpliceHunter. Methods in Molecular Biology (Clifton, N.J.). 1751: 73-88. PMID 29508290 DOI: 10.1007/978-1-4939-7710-9_5 |
0.461 |
|
| 2017 |
Canzar S, Salzberg SL. Short Read Mapping: An Algorithmic Tour. Proceedings of the Ieee. Institute of Electrical and Electronics Engineers. 105: 436-458. PMID 28502990 DOI: 10.1109/JPROC.2015.2455551 |
0.581 |
|
| 2017 |
Canzar S, Neu KE, Tang Q, Wilson PC, Khan AA. BASIC: BCR assembly from single cells. Bioinformatics (Oxford, England). 33: 425-427. PMID 28172415 DOI: 10.1093/Bioinformatics/Btw631 |
0.383 |
|
| 2016 |
Kuang Z, Boeke JD, Canzar S. The dynamic landscape of fission yeast meiosis alternative-splice isoforms. Genome Research. PMID 27856494 DOI: 10.1101/Gr.208041.116 |
0.383 |
|
| 2016 |
Canzar S, Andreotti S, Weese D, Reinert K, Klau GW. CIDANE: comprehensive isoform discovery and abundance estimation. Genome Biology. 17: 16. PMID 26831908 DOI: 10.1186/S13059-015-0865-0 |
0.349 |
|
| 2016 |
Canzar S, Elbassioni K, Jones M, Mestre J. Resolving Conflicting Predictions from Multimapping Reads. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. PMID 26745826 DOI: 10.1089/Cmb.2015.0164 |
0.441 |
|
| 2013 |
Andreotti S, Reinert K, Canzar S. The duplication-loss small phylogeny problem: from cherries to trees. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 20: 643-59. PMID 24000925 DOI: 10.1089/Cmb.2013.0057 |
0.459 |
|
| 2013 |
Magoc T, Pabinger S, Canzar S, Liu X, Su Q, Puiu D, Tallon LJ, Salzberg SL. GAGE-B: an evaluation of genome assemblers for bacterial organisms. Bioinformatics (Oxford, England). 29: 1718-25. PMID 23665771 DOI: 10.1093/Bioinformatics/Btt273 |
0.607 |
|
| 2012 |
Marschall T, Costa IG, Canzar S, Bauer M, Klau GW, Schliep A, Schönhuth A. CLEVER: clique-enumerating variant finder. Bioinformatics (Oxford, England). 28: 2875-82. PMID 23060616 DOI: 10.1093/Bioinformatics/Bts566 |
0.454 |
|
| 2011 |
Canzar S, Toussaint NC, Klau GW. An exact algorithm for side-chain placement in protein design Optimization Letters. 5: 393-406. DOI: 10.1007/S11590-011-0308-0 |
0.301 |
|
| 2008 |
Althaus E, Canzar S. A Lagrangian relaxation approach for the multiple sequence alignment problem Journal of Combinatorial Optimization. 16: 127-154. DOI: 10.1007/S10878-008-9139-Z |
0.349 |
|
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