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Dmitry Ovchinnikov - Publications

Affiliations: 
Molecular Genetics University of Texas MD Anderson Cancer Center, Houston, TX, United States 
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33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Tracey TJ, Jiang L, Gill MK, Ranie SN, Ovchinnikov DA, Wolvetang EJ, Ngo ST. Generation of a human induced pluripotent stem cell line (UQi001-A-1) edited with the CRISPR-Cas9 system to carry the heterozygous TARDBP c.1144G > A (p.A382T) missense mutation. Stem Cell Research. 70: 103137. PMID 37315423 DOI: 10.1016/j.scr.2023.103137  0.331
2021 Alharbi SA, Ovchinnikov DA, Wolvetang E. Leucine-rich repeat-containing G protein-coupled receptor 5 marks different cancer stem cell compartments in human Caco-2 and LoVo colon cancer lines. World Journal of Gastroenterology. 27: 1578-1594. PMID 33958845 DOI: 10.3748/wjg.v27.i15.1578  0.323
2021 Shahsavari A, Weeratunga P, Ovchinnikov DA, Whitworth DJ. Pluripotency and immunomodulatory signatures of canine induced pluripotent stem cell-derived mesenchymal stromal cells are similar to harvested mesenchymal stromal cells. Scientific Reports. 11: 3486. PMID 33568729 DOI: 10.1038/s41598-021-82856-3  0.698
2020 Ovchinnikov DA. Genetically-modified cell lines: categorisation and considerations for characterisation. Stem Cell Research. 49: 102103. PMID 33291011 DOI: 10.1016/j.scr.2020.102103  0.336
2019 Weeratunga P, Shahsavari A, Fennis EEM, Wolvetang EJ, Ovchinnikov DA, Whitworth DJ. Induced pluripotent stem cell-derived mesenchymal stem cells from the Tasmanian devil (Sarcophilus harrisii) express immunomodulatory factors and a tropism towards devil facial tumour cells. Stem Cells and Development. PMID 31709909 DOI: 10.1089/scd.2019.0203  0.759
2019 Requena J, Alvarez-Palomo AB, Codina-Pascual M, Delgado-Morales R, Moran S, Esteller M, Sal M, Juan-Otero M, Boronat Barado A, Consiglio A, Addeleccia Bogle O, Wolvertang E, Ovchinnikov D, Alvarez I, Jaraquemada D, et al. Global proteomic and methylome analysis in human induced pluripotent stem cells reveals overexpression of a human TLR3 affecting proper innate immune response signaling. Stem Cells (Dayton, Ohio). PMID 30664289 DOI: 10.1002/Stem.2966  0.514
2018 Alateeq S, Ovchinnikov D, Tracey T, Whitworth D, Al-Rubaish A, Al-Ali A, Wolvetang E. Identification of on-target mutagenesis during correction of a beta-thalassemia splice mutation in iPS cells with optimised CRISPR/Cas9-double nickase reveals potential safety concerns. Apl Bioengineering. 2: 046103. PMID 31069325 DOI: 10.1063/1.5048625  0.655
2018 Whitworth DJ, Limnios IJ, Gauthier ME, Weeratunga P, Ovchinnikov DA, Baillie G, Grimmond SM, Graves JAM, Wolvetang EJ. Platypus Induced Pluripotent Stem Cells: the Unique Pluripotency Signature of a Monotreme. Stem Cells and Development. PMID 30417748 DOI: 10.1089/scd.2018.0179  0.73
2018 Fortuna PRJ, Bielefeldt-Ohmann H, Ovchinnikov DA, Wolvetang EJ, Whitworth DJ. Cortical Neurons Derived From Equine Induced Pluripotent Stem Cells Are Susceptible to Neurotropic Flavivirus Infection and Replication: an in vitro model for equine neuropathic diseases. Stem Cells and Development. PMID 29562867 DOI: 10.1089/scd.2017.0106  0.649
2017 Weeratunga P, Shahsavari A, Ovchinnikov DA, Wolvetang EJ, Whitworth DJ. Induced pluripotent stem cells from a marsupial, the Tasmanian devil (Sarcophilus harrisii): insight into the evolution of mammalian pluripotency. Stem Cells and Development. PMID 29161957 DOI: 10.1089/scd.2017.0224  0.763
2017 Bellmaine SF, Ovchinnikov DA, Manallack DT, Cuddy CE, Elefanty AG, Stanley EG, Wolvetang EJ, Williams SJ, Pera M. Inhibition of DYRK1A disrupts neural lineage specification in human pluripotent stem cells. Elife. 6. PMID 28884684 DOI: 10.7554/Elife.24502  0.455
2015 Ovchinnikov DA, Sun J, Wolvetang EJ. Generation of Footprint-Free Induced Pluripotent Stem Cells from Human Fibroblasts Using Episomal Plasmid Vectors. Methods in Molecular Biology (Clifton, N.J.). 1330: 37-45. PMID 26621587 DOI: 10.1007/978-1-4939-2848-4_4  0.394
2015 Hasegawa Y, Taylor D, Ovchinnikov DA, Wolvetang EJ, de Torrenté L, Mar JC. Variability of Gene Expression Identifies Transcriptional Regulators of Early Human Embryonic Development. Plos Genetics. 11: e1005428. PMID 26288249 DOI: 10.1371/Journal.Pgen.1005428  0.313
2015 Thakar NY, Ovchinnikov DA, Hastie ML, Gorman J, Wolvetang EJ. RELB Alters Proliferation of Human Pluripotent Stem Cells via IMP3- and LIN28-Mediated Modulation of the Expression of IGF2 and Other Cell-Cycle Regulators. Stem Cells and Development. 24: 1888-900. PMID 25794352 DOI: 10.1089/scd.2014.0587  0.444
2015 Arner E, Daub CO, Vitting-Seerup K, Andersson R, Lilje B, Drabløs F, Lennartsson A, Rönnerblad M, Hrydziuszko O, Vitezic M, Freeman TC, Alhendi AM, Arner P, Axton R, Baillie JK, ... ... Ovchinnikov D, et al. Gene regulation. Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells. Science (New York, N.Y.). 347: 1010-4. PMID 25678556 DOI: 10.1126/Science.1259418  0.365
2015 Ovchinnikov DA, Hidalgo A, Yang SK, Zhang X, Hudson J, Mazzone SB, Chen C, Cooper-White JJ, Wolvetang EJ. Isolation of contractile cardiomyocytes from human pluripotent stem-cell-derived cardiomyogenic cultures using a human NCX1-EGFP reporter. Stem Cells and Development. 24: 11-20. PMID 25075536 DOI: 10.1089/scd.2014.0195  0.404
2014 Ovchinnikov DA, Wolvetang EJ. Opportunities and Limitations of Modelling Alzheimer's Disease with Induced Pluripotent Stem Cells. Journal of Clinical Medicine. 3: 1357-72. PMID 26237606 DOI: 10.3390/jcm3041357  0.34
2014 Alamein MA, Wolvetang EJ, Ovchinnikov DA, Stephens S, Sanders K, Warnke PH. Polymeric nanofibrous substrates stimulate pluripotent stem cells to form three-dimensional multilayered patty-like spheroids in feeder-free culture and maintain their pluripotency. Journal of Tissue Engineering and Regenerative Medicine. PMID 25423911 DOI: 10.1002/term.1960  0.422
2014 Ovchinnikov DA, Titmarsh DM, Fortuna PR, Hidalgo A, Alharbi S, Whitworth DJ, Cooper-White JJ, Wolvetang EJ. Transgenic human ES and iPS reporter cell lines for identification and selection of pluripotent stem cells in vitro. Stem Cell Research. 13: 251-61. PMID 25108530 DOI: 10.1016/j.scr.2014.05.006  0.748
2014 Whitworth DJ, Frith JE, Frith TJ, Ovchinnikov DA, Cooper-White JJ, Wolvetang EJ. Derivation of mesenchymal stromal cells from canine induced pluripotent stem cells by inhibition of the TGFβ/activin signaling pathway. Stem Cells and Development. 23: 3021-33. PMID 25055193 DOI: 10.1089/scd.2013.0634  0.756
2014 Forrest AR, Kawaji H, Rehli M, Baillie JK, de Hoon MJ, Haberle V, Lassmann T, Kulakovskiy IV, Lizio M, Itoh M, Andersson R, Mungall CJ, Meehan TF, Schmeier S, ... ... Ovchinnikov DA, et al. A promoter-level mammalian expression atlas. Nature. 507: 462-70. PMID 24670764 DOI: 10.1038/Nature13182  0.333
2014 Whitworth DJ, Ovchinnikov DA, Sun J, Fortuna PR, Wolvetang EJ. Generation and characterization of leukemia inhibitory factor-dependent equine induced pluripotent stem cells from adult dermal fibroblasts. Stem Cells and Development. 23: 1515-23. PMID 24555755 DOI: 10.1089/scd.2013.0461  0.744
2013 Titmarsh DM, Ovchinnikov DA, Wolvetang EJ, Cooper-White JJ. Full factorial screening of human embryonic stem cell maintenance with multiplexed microbioreactor arrays. Biotechnology Journal. 8: 822-34. PMID 23813764 DOI: 10.1002/biot.201200375  0.416
2013 Briggs JA, Mason EA, Ovchinnikov DA, Wells CA, Wolvetang EJ. Concise review: new paradigms for Down syndrome research using induced pluripotent stem cells: tackling complex human genetic disease. Stem Cells Translational Medicine. 2: 175-84. PMID 23413375 DOI: 10.5966/sctm.2012-0117  0.34
2013 Briggs JA, Sun J, Shepherd J, Ovchinnikov DA, Chung TL, Nayler SP, Kao LP, Morrow CA, Thakar NY, Soo SY, Peura T, Grimmond S, Wolvetang EJ. Integration-free induced pluripotent stem cells model genetic and neural developmental features of down syndrome etiology Stem Cells. 31: 467-478. PMID 23225669 DOI: 10.1002/stem.1297  0.358
2012 Ovchinnikov DA, Turner JP, Titmarsh DM, Thakar NY, Sin DC, Cooper-White JJ, Wolvetang EJ. Generation of a human embryonic stem cell line stably expressing high levels of the fluorescent protein mCherry. World Journal of Stem Cells. 4: 71-9. PMID 22993664 DOI: 10.4252/wjsc.v4.i7.71  0.39
2012 Whitworth DJ, Ovchinnikov DA, Wolvetang EJ. Generation and characterization of LIF-dependent canine induced pluripotent stem cells from adult dermal fibroblasts. Stem Cells and Development. 21: 2288-97. PMID 22221227 DOI: 10.1089/scd.2011.0608  0.764
2006 Ovchinnikov DA, Selever J, Wang Y, Chen YT, Mishina Y, Martin JF, Behringer RR. BMP receptor type IA in limb bud mesenchyme regulates distal outgrowth and patterning. Developmental Biology. 295: 103-15. PMID 16630606 DOI: 10.1016/J.Ydbio.2006.03.013  0.702
2005 Yoon BS, Ovchinnikov DA, Yoshii I, Mishina Y, Behringer RR, Lyons KM. Bmpr1a and Bmpr1b have overlapping functions and are essential for chondrogenesis in vivo Proceedings of the National Academy of Sciences of the United States of America. 102: 5062-5067. PMID 15781876 DOI: 10.1073/Pnas.0500031102  0.609
2000 Iwata T, Chen L, Li CL, Ovchinnikov DA, Behringer RR, Francomano CA, Deng CX. A neonatal lethal mutation in FGFR3 uncouples proliferation and differentiation of growth plate chondrocytes in embryos Human Molecular Genetics. 9: 1603-1613. PMID 10861287 DOI: 10.1093/Hmg/9.11.1603  0.503
2000 Ovchinnikov DA, Deng JM, Ogunrinu G, Behringer RR. Col2a1-directed expression of Cre recombinase in differentiating chondrocytes in transgenic mice. Genesis (New York, N.Y. : 2000). 26: 145-6. PMID 10686612 DOI: 10.1002/(Sici)1526-968X(200002)26:2<145::Aid-Gene14>3.0.Co;2-C  0.458
1998 Chen H, Ovchinnikov D, Pressman CL, Aulehla A, Lun Y, Johnson RL. Multiple calvarial defects in lmx1b mutant mice. Developmental Genetics. 22: 314-20. PMID 9664684 DOI: 10.1002/(Sici)1520-6408(1998)22:4<314::Aid-Dvg2>3.0.Co;2-9  0.344
1998 Chen H, Lun Y, Ovchinnikov D, Kokubo H, Oberg KC, Pepicelli CV, Gan L, Lee B, Johnson RL. Limb and kidney defects in Lmx1b mutant mice suggest an involvement of LMX1B in human nail patella syndrome Nature Genetics. 19: 51-55. PMID 9590288 DOI: 10.1038/Ng0598-51  0.31
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