Carlos D. Brody - Publications

Affiliations: 
Princeton University, Princeton, NJ 
Website:
http://brodylab.princeton.edu

83 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Pagan M, Tang VD, Aoi MC, Pillow JW, Mante V, Sussillo D, Brody CD. Individual variability of neural computations underlying flexible decisions. Nature. PMID 39608399 DOI: 10.1038/s41586-024-08433-6  0.382
2024 Jha A, Gupta D, Brody CD, Pillow JW. Disentangling the Roles of Distinct Cell Classes with Cell-Type Dynamical Systems. Biorxiv : the Preprint Server For Biology. PMID 39574751 DOI: 10.1101/2024.07.08.602520  0.79
2024 DePasquale B, Brody CD, Pillow JW. Neural population dynamics underlying evidence accumulation in multiple rat brain regions. Elife. 13. PMID 39162374 DOI: 10.7554/eLife.84955  0.834
2024 Gupta D, Kopec CD, Bondy AG, Luo TZ, Elliott VA, Brody CD. A multi-region recurrent circuit for evidence accumulation in rats. Biorxiv : the Preprint Server For Biology. PMID 39026895 DOI: 10.1101/2024.07.08.602544  0.803
2024 Tyler Boyd-Meredith J, Piet AT, Kopec CD, Brody CD. A cognitive process model captures near-optimal confidence-guided waiting in rats. Biorxiv : the Preprint Server For Biology. PMID 38895394 DOI: 10.1101/2024.06.07.597954  0.76
2024 Rich PD, Thiberge SY, Scott BB, Guo C, Tervo DGR, Brody CD, Karpova AY, Daw ND, Tank DW. Magnetic voluntary head-fixation in transgenic rats enables lifespan imaging of hippocampal neurons. Nature Communications. 15: 4154. PMID 38755205 DOI: 10.1038/s41467-024-48505-9  0.747
2024 Venditto SJC, Miller KJ, Brody CD, Daw ND. Dynamic reinforcement learning reveals time-dependent shifts in strategy during reward learning. Biorxiv : the Preprint Server For Biology. PMID 38464244 DOI: 10.1101/2024.02.28.582617  0.679
2024 Gupta D, DePasquale B, Kopec CD, Brody CD. Trial-history biases in evidence accumulation can give rise to apparent lapses in decision-making. Nature Communications. 15: 662. PMID 38253526 DOI: 10.1038/s41467-024-44880-5  0.817
2023 Brown LS, Cho JR, Bolkan SS, Nieh EH, Schottdorf M, Tank DW, Brody CD, Witten IB, Goldman MS. Neural circuit models for evidence accumulation through choice-selective sequences. Biorxiv : the Preprint Server For Biology. PMID 38234715 DOI: 10.1101/2023.09.01.555612  0.836
2023 Kim TD, Luo TZ, Can T, Krishnamurthy K, Pillow JW, Brody CD. Flow-field inference from neural data using deep recurrent networks. Biorxiv : the Preprint Server For Biology. PMID 38014290 DOI: 10.1101/2023.11.14.567136  0.821
2023 Luo TZ, Kim TD, Gupta D, Bondy AG, Kopec CD, Elliot VA, DePasquale B, Brody CD. Non-canonical attractor dynamics underlie perceptual decision-making. Biorxiv : the Preprint Server For Biology. PMID 37904994 DOI: 10.1101/2023.10.15.562427  0.804
2023 Dennis EJ, Bibawi P, Dhanerawala ZM, Lynch LA, Wang SS, Brody CD. Princeton RAtlas: A Common Coordinate Framework for Fully cleared, Whole Brains. Bio-Protocol. 13: e4854. PMID 37900100 DOI: 10.21769/BioProtoc.4854  0.649
2023 Gupta D, DePasquale B, Kopec CD, Brody CD. Trial-history biases in evidence accumulation can give rise to apparent lapses. Biorxiv : the Preprint Server For Biology. PMID 36778392 DOI: 10.1101/2023.01.18.524599  0.818
2022 Pinto L, Koay SA, Engelhard B, Yoon AM, Deverett B, Thiberge SY, Witten IB, Tank DW, Brody CD. Corrigendum: An accumulation-of-evidence task using visual pulses for mice navigating in virtual reality. Frontiers in Behavioral Neuroscience. 16: 1079746. PMID 36483521 DOI: 10.3389/fnbeh.2022.1079746  0.625
2022 Miller KJ, Botvinick MM, Brody CD. Value representations in the rodent orbitofrontal cortex drive learning, not choice. Elife. 11. PMID 35975792 DOI: 10.7554/eLife.64575  0.716
2022 Pinto L, Tank DW, Brody CD. Multiple timescales of sensory-evidence accumulation across the dorsal cortex. Elife. 11. PMID 35708483 DOI: 10.7554/eLife.70263  0.701
2022 Boyd-Meredith JT, Piet AT, Dennis EJ, El Hady A, Brody CD. Stable choice coding in rat frontal orienting fields across model-predicted changes of mind. Nature Communications. 13: 3235. PMID 35688813 DOI: 10.1038/s41467-022-30736-3  0.833
2021 Koay SA, Charles AS, Thiberge SY, Brody CD, Tank DW. Sequential and efficient neural-population coding of complex task information. Neuron. PMID 34776042 DOI: 10.1016/j.neuron.2021.10.020  0.631
2021 Hocker DL, Brody CD, Savin C, Constantinople CM. Subpopulations of neurons in lOFC encode previous and current rewards at time of choice. Elife. 10. PMID 34693908 DOI: 10.7554/eLife.70129  0.783
2021 Bittner SR, Palmigiano A, Piet AT, Duan CA, Brody CD, Miller KD, Cunningham J. Interrogating theoretical models of neural computation with emergent property inference. Elife. 10. PMID 34323690 DOI: 10.7554/eLife.56265  0.794
2021 Nieh EH, Schottdorf M, Freeman NW, Low RJ, Lewallen S, Koay SA, Pinto L, Gauthier JL, Brody CD, Tank DW. Geometry of abstract learned knowledge in the hippocampus. Nature. PMID 34135512 DOI: 10.1038/s41586-021-03652-7  0.803
2021 Duan CA, Pagan M, Piet AT, Kopec CD, Akrami A, Riordan AJ, Erlich JC, Brody CD. Collicular circuits for flexible sensorimotor routing. Nature Neuroscience. PMID 34083787 DOI: 10.1038/s41593-021-00865-x  0.803
2021 Roy NA, Bak JH, Akrami A, Brody CD, Pillow JW. Extracting the dynamics of behavior in sensory decision-making experiments. Neuron. PMID 33412101 DOI: 10.1016/j.neuron.2020.12.004  0.799
2020 Koay SA, Thiberge S, Brody CD, Tank DW. Amplitude modulations of cortical sensory responses in pulsatile evidence accumulation. Elife. 9. PMID 33263278 DOI: 10.7554/eLife.60628  0.674
2020 Luo TZ, Bondy AG, Gupta D, Elliott VA, Kopec CD, Brody CD. An approach for long-term, multi-probe Neuropixels recordings in unrestrained rats. Elife. 9. PMID 33089778 DOI: 10.7554/eLife.59716  0.76
2019 Meshulam L, Gauthier JL, Brody CD, Tank DW, Bialek W. Coarse Graining, Fixed Points, and Scaling in a Large Population of Neurons. Physical Review Letters. 123: 178103. PMID 31702278 DOI: 10.1103/Physrevlett.123.178103  0.598
2019 Constantinople CM, Piet AT, Bibawi P, Akrami A, Kopec C, Brody CD. Lateral orbitofrontal cortex promotes trial-by-trial learning of risky, but not spatial, biases. Elife. 8. PMID 31692447 DOI: 10.7554/Elife.49744  0.818
2019 Pinto L, Rajan K, DePasquale B, Thiberge SY, Tank DW, Brody CD. Task-Dependent Changes in the Large-Scale Dynamics and Necessity of Cortical Regions. Neuron. PMID 31564591 DOI: 10.1016/J.Neuron.2019.08.025  0.825
2019 Constantinople CM, Piet AT, Brody CD. An Analysis of Decision under Risk in Rats. Current Biology : Cb. PMID 31155352 DOI: 10.1016/J.Cub.2019.05.013  0.796
2019 Salinas E, Brody CD, Ding L. Decision letter: Reinforcement biases subsequent perceptual decisions when confidence is low, a widespread behavioral phenomenon Elife. DOI: 10.7554/Elife.49834.Sa1  0.604
2019 Constantinople CM, Piet AT, Bibawi P, Akrami A, Kopec C, Brody CD. Author response: Lateral orbitofrontal cortex promotes trial-by-trial learning of risky, but not spatial, biases Elife. DOI: 10.7554/Elife.49744.016  0.784
2018 Roy NA, Bak JH, Akrami A, Brody CD, Pillow JW. Efficient inference for time-varying behavior during learning. Advances in Neural Information Processing Systems. 31: 5695-5705. PMID 31244514  0.776
2018 Scott BB, Thiberge SY, Guo C, Tervo DGR, Brody CD, Karpova AY, Tank DW. Imaging Cortical Dynamics in GCaMP Transgenic Rats with a Head-Mounted Widefield Macroscope. Neuron. PMID 30482694 DOI: 10.1016/j.neuron.2018.09.050  0.7
2018 Piet AT, El Hady A, Brody CD. Rats adopt the optimal timescale for evidence integration in a dynamic environment. Nature Communications. 9: 4265. PMID 30323280 DOI: 10.1038/s41467-018-06561-y  0.761
2018 Yartsev MM, Hanks TD, Yoon AM, Brody CD. Causal contribution and dynamical encoding in the striatum during evidence accumulation. Elife. 7. PMID 30141773 DOI: 10.7554/eLife.34929  0.836
2018 Miller KJ, Botvinick MM, Brody CD. Author Correction: Dorsal hippocampus contributes to model-based planning. Nature Neuroscience. 21: 1015. PMID 29977026 DOI: 10.1038/S41593-017-0026-8  0.656
2018 Pinto L, Koay SA, Engelhard B, Yoon AM, Deverett B, Thiberge SY, Witten IB, Tank DW, Brody CD. An Accumulation-of-Evidence Task Using Visual Pulses for Mice Navigating in Virtual Reality. Frontiers in Behavioral Neuroscience. 12: 36. PMID 29559900 DOI: 10.3389/Fnbeh.2018.00036  0.729
2018 Akrami A, Kopec CD, Diamond ME, Brody CD. Posterior parietal cortex represents sensory history and mediates its effects on behaviour. Nature. PMID 29414944 DOI: 10.1038/Nature25510  0.823
2018 Yartsev MM, Hanks TD, Yoon AM, Brody CD. Author response: Causal contribution and dynamical encoding in the striatum during evidence accumulation Elife. DOI: 10.7554/Elife.34929.027  0.733
2017 Meshulam L, Gauthier JL, Brody CD, Tank DW, Bialek W. Collective Behavior of Place and Non-place Neurons in the Hippocampal Network. Neuron. PMID 29154129 DOI: 10.1016/J.Neuron.2017.10.027  0.617
2017 Piet AT, Erlich JC, Kopec CD, Brody CD. Rat Prefrontal Cortex Inactivations during Decision Making Are Explained by Bistable Attractor Dynamics. Neural Computation. 1-26. PMID 28777728 DOI: 10.1162/Neco_A_01005  0.823
2017 Miller KJ, Botvinick MM, Brody CD. Dorsal hippocampus contributes to model-based planning. Nature Neuroscience. PMID 28758995 DOI: 10.1038/Nn.4613  0.697
2017 Scott BB, Constantinople CM, Akrami A, Hanks TD, Brody CD, Tank DW. Fronto-parietal Cortical Circuits Encode Accumulated Evidence with a Diversity of Timescales. Neuron. PMID 28669543 DOI: 10.1016/J.Neuron.2017.06.013  0.827
2016 Brody CD, Hanks TD. Neural underpinnings of the evidence accumulator. Current Opinion in Neurobiology. PMID 26878969 DOI: 10.1016/j.conb.2016.01.003  0.769
2015 Scott BB, Constantinople CM, Erlich JC, Tank DW, Brody CD. Sources of noise during accumulation of evidence in unrestrained and voluntarily head-restrained rats. Elife. 4. PMID 26673896 DOI: 10.7554/Elife.11308  0.794
2015 Kopec CD, Erlich JC, Brunton BW, Deisseroth K, Brody CD. Cortical and Subcortical Contributions to Short-Term Memory for Orienting Movements. Neuron. 88: 367-77. PMID 26439529 DOI: 10.1016/J.Neuron.2015.08.033  0.81
2015 Duan CA, Erlich JC, Brody CD. Requirement of Prefrontal and Midbrain Regions for Rapid Executive Control of Behavior in the Rat. Neuron. 86: 1491-503. PMID 26087166 DOI: 10.1016/J.Neuron.2015.05.042  0.808
2015 Erlich JC, Brunton BW, Duan CA, Hanks TD, Brody CD. Distinct effects of prefrontal and parietal cortex inactivations on an accumulation of evidence task in the rat. Elife. 4. PMID 25869470 DOI: 10.7554/Elife.05457  0.83
2015 Hanks TD, Kopec CD, Brunton BW, Duan CA, Erlich JC, Brody CD. Distinct relationships of parietal and prefrontal cortices to evidence accumulation. Nature. 520: 220-3. PMID 25600270 DOI: 10.1038/Nature14066  0.823
2015 Scott BB, Constantinople CM, Erlich JC, Tank DW, Brody CD. Author response: Sources of noise during accumulation of evidence in unrestrained and voluntarily head-restrained rats Elife. DOI: 10.7554/Elife.11308.026  0.77
2015 Erlich JC, Brunton BW, Duan CA, Hanks TD, Brody CD. Author response: Distinct effects of prefrontal and parietal cortex inactivations on an accumulation of evidence task in the rat Elife. DOI: 10.7554/Elife.05457.026  0.804
2013 Erlich JC, Brody CD. Neuroscience: What to do and how. Nature. 503: 45-7. PMID 24201276 DOI: 10.1038/503045a  0.805
2013 Scott BB, Brody CD, Tank DW. Cellular resolution functional imaging in behaving rats using voluntary head restraint. Neuron. 80: 371-84. PMID 24055015 DOI: 10.1016/j.neuron.2013.08.002  0.689
2013 Kubanek J, Snyder LH, Brunton BW, Brody CD, Schalk G. A low-frequency oscillatory neural signal in humans encodes a developing decision variable. Neuroimage. 83: 795-808. PMID 23872495 DOI: 10.1016/J.Neuroimage.2013.06.085  0.721
2013 Brunton BW, Botvinick MM, Brody CD. Rats and humans can optimally accumulate evidence for decision-making. Science (New York, N.Y.). 340: 95-8. PMID 23559254 DOI: 10.1126/Science.1233912  0.804
2011 Erlich JC, Bialek M, Brody CD. A cortical substrate for memory-guided orienting in the rat. Neuron. 72: 330-43. PMID 22017991 DOI: 10.1016/J.Neuron.2011.07.010  0.819
2011 Pai S, Erlich JC, Kopec C, Brody CD. Minimal impairment in a rat model of duration discrimination following excitotoxic lesions of primary auditory and prefrontal cortices. Frontiers in Systems Neuroscience. 5: 74. PMID 21991246 DOI: 10.3389/Fnsys.2011.00074  0.809
2011 Kopec CD, Bowers AC, Pai S, Brody CD. Semi-automated atlas-based analysis of brain histological sections. Journal of Neuroscience Methods. 196: 12-9. PMID 21194546 DOI: 10.1016/J.Jneumeth.2010.12.007  0.762
2010 Kopec CD, Brody CD. Human performance on the temporal bisection task. Brain and Cognition. 74: 262-72. PMID 20846774 DOI: 10.1016/J.Bandc.2010.08.006  0.77
2010 Jun JK, Miller P, Hernández A, Zainos A, Lemus L, Brody CD, Romo R. Heterogenous population coding of a short-term memory and decision task. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 916-29. PMID 20089900 DOI: 10.1523/Jneurosci.2062-09.2010  0.761
2010 Machens CK, Romo R, Brody CD. Functional, but not anatomical, separation of "what" and "when" in prefrontal cortex. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 350-60. PMID 20053916 DOI: 10.1523/JNEUROSCI.3276-09.2010  0.782
2010 Jun JK, Miller P, Hernández A, Zainos A, Lemus L, Brody CD, Romo R. Heterogenous population coding of a short-term memory and decision task (The Journal of Neuroscience (2010) (916-929)) Journal of Neuroscience. 30.  0.715
2009 Chow SS, Romo R, Brody CD. Context-dependent modulation of functional connectivity: secondary somatosensory cortex to prefrontal cortex connections in two-stimulus-interval discrimination tasks. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 7238-45. PMID 19494146 DOI: 10.1523/JNEUROSCI.4856-08.2009  0.643
2008 Markowitz DA, Collman F, Brody CD, Hopfield JJ, Tank DW. Rate-specific synchrony: using noisy oscillations to detect equally active neurons. Proceedings of the National Academy of Sciences of the United States of America. 105: 8422-7. PMID 18550830 DOI: 10.1073/Pnas.0803183105  0.793
2008 Machens CK, Brody CD. Design of continuous attractor networks with monotonic tuning using a symmetry principle. Neural Computation. 20: 452-85. PMID 18047414 DOI: 10.1162/neco.2007.07-06-297  0.667
2005 Luna R, Hernández A, Brody CD, Romo R. Neural codes for perceptual discrimination in primary somatosensory cortex. Nature Neuroscience. 8: 1210-9. PMID 16056223 DOI: 10.1038/nn1513  0.785
2005 Machens CK, Romo R, Brody CD. Flexible control of mutual inhibition: a neural model of two-interval discrimination. Science (New York, N.Y.). 307: 1121-4. PMID 15718474 DOI: 10.1126/science.1104171  0.783
2004 Hopfield JJ, Brody CD. Learning rules and network repair in spike-timing-based computation networks. Proceedings of the National Academy of Sciences of the United States of America. 101: 337-42. PMID 14694191 DOI: 10.1073/pnas.2536316100  0.577
2003 Miller P, Brody CD, Romo R, Wang XJ. A recurrent network model of somatosensory parametric working memory in the prefrontal cortex. Cerebral Cortex (New York, N.Y. : 1991). 13: 1208-18. PMID 14576212 DOI: 10.1093/CERCOR/BHG101  0.617
2003 Brody CD, Hernández A, Zainos A, Romo R. Timing and neural encoding of somatosensory parametric working memory in macaque prefrontal cortex. Cerebral Cortex (New York, N.Y. : 1991). 13: 1196-207. PMID 14576211 DOI: 10.1093/cercor/bhg100  0.632
2003 Hopfield JJ, Brody CD. Separating objects and 'neural' computation. Comptes Rendus Biologies. 326: 219-22. PMID 12754940 DOI: 10.1016/S1631-0691(03)00017-9  0.546
2003 Brody CD, Romo R, Kepecs A. Basic mechanisms for graded persistent activity: discrete attractors, continuous attractors, and dynamic representations. Current Opinion in Neurobiology. 13: 204-11. PMID 12744975 DOI: 10.1016/S0959-4388(03)00050-3  0.614
2003 Brody CD, Hopfield JJ. Simple networks for spike-timing-based computation, with application to olfactory processing. Neuron. 37: 843-52. PMID 12628174 DOI: 10.1016/S0896-6273(03)00120-X  0.551
2002 Brody CD, Hernández A, Zainos A, Lemus L, Romo R. Analysing neuronal correlates of the comparison of two sequentially presented sensory stimuli. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 357: 1843-50. PMID 12626017 DOI: 10.1098/rstb.2002.1167  0.779
2002 Romo R, Hernández A, Zainos A, Lemus L, Brody CD. Neuronal correlates of decision-making in secondary somatosensory cortex. Nature Neuroscience. 5: 1217-25. PMID 12368806 DOI: 10.1038/nn950  0.757
2002 Romo R, Hernández A, Salinas E, Brody CD, Zainos A, Lemus L, de Lafuente V, Luna R. From sensation to action. Behavioural Brain Research. 135: 105-18. PMID 12356440 DOI: 10.1016/S0166-4328(02)00161-4  0.802
2002 Romo R, Hernández A, Zainos A, Brody C, Salinas E. Exploring the cortical evidence of a sensory-discrimination process. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 357: 1039-51. PMID 12217172 DOI: 10.1098/rstb.2002.1100  0.742
2001 Hopfield JJ, Brody CD. What is a moment? Transient synchrony as a collective mechanism for spatiotemporal integration. Proceedings of the National Academy of Sciences of the United States of America. 98: 1282-7. PMID 11158631 DOI: 10.1073/pnas.031567098  0.591
2001 Brody CD, Hopfield JJ. Transient synchrony and the integration of spectrotemporal information Proceedings of Spie - the International Society For Optical Engineering. 4479: 1-3. DOI: 10.1117/12.448326  0.45
2000 Hopfield JJ, Brody CD. What is a moment? "Cortical" sensory integration over a brief interval. Proceedings of the National Academy of Sciences of the United States of America. 97: 13919-24. PMID 11095747 DOI: 10.1073/pnas.250483697  0.539
2000 Romo R, Hernández A, Zainos A, Brody CD, Lemus L. Sensing without touching: psychophysical performance based on cortical microstimulation. Neuron. 26: 273-8. PMID 10798410 DOI: 10.1016/S0896-6273(00)81156-3  0.729
1999 Romo R, Brody CD, Hernández A, Lemus L. Neuronal correlates of parametric working memory in the prefrontal cortex. Nature. 399: 470-3. PMID 10365959 DOI: 10.1038/20939  0.762
1998 Hopfield JJ, Brody CD, Roweis S. Computing with action potentials Advances in Neural Information Processing Systems. 166-172.  0.691
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