Steven Foley - Publications

Affiliations: 
Linguistics University of California, Santa Cruz, Santa Cruz, CA, United States 

47 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Commichaux S, Rand H, Javkar K, Molloy EK, Pettengill JB, Pightling A, Hoffmann M, Pop M, Jayeola V, Foley S, Luo Y. Assessment of plasmids for relating the 2020 Salmonella enterica serovar Newport onion outbreak to farms implicated by the outbreak investigation. Bmc Genomics. 24: 165. PMID 37016310 DOI: 10.1186/s12864-023-09245-0  0.314
2023 Algarni S, Han J, Gudeta DD, Khajanchi BK, Ricke SC, Kwon YM, Rhoads DD, Foley SL. analyses of diversity and dissemination of antimicrobial resistance genes and mobile genetics elements, for plasmids of enteric pathogens. Frontiers in Microbiology. 13: 1095128. PMID 36777021 DOI: 10.3389/fmicb.2022.1095128  0.302
2022 Sanad YM, Aljahdali NH, Khajanchi BK, Nayak R, Khan A, Foley SL. Microbial Genetics and Clonal Dissemination of   Serotype Javiana Isolated from Human Populations in Arkansas, USA. Pathogens (Basel, Switzerland). 11. PMID 36297250 DOI: 10.3390/pathogens11101192  0.375
2022 Tate H, Hsu CH, Chen JC, Han J, Foley SL, Folster JP, Francois Watkins LK, Reynolds J, Tillman GE, Nyirabahizi E, Zhao S. Genomic Diversity, Antimicrobial Resistance, and Virulence Gene Profiles of Serovar Kentucky Isolated from Humans, Food, and Animal Ceca Content Sources in the United States. Foodborne Pathogens and Disease. 19: 509-521. PMID 35960531 DOI: 10.1089/fpd.2022.0005  0.337
2022 Algarni S, Ricke SC, Foley SL, Han J. The Dynamics of the Antimicrobial Resistance Mobilome of and Related Enteric Bacteria. Frontiers in Microbiology. 13: 859854. PMID 35432284 DOI: 10.3389/fmicb.2022.859854  0.34
2022 Sung K, Gudeta DD, Park M, Chon J, Kim S, Nawaz MS, Foley SL, Khan SA. Draft Genome Sequences of 12 Panton-Valentine Leucocidin-Positive and Multidrug-Resistant Methicillin-Resistant Staphylococcus aureus Strains Isolated from an Intensive Care Unit in Pakistan. Microbiology Resource Announcements. e0119021. PMID 35084222 DOI: 10.1128/mra.01190-21  0.34
2022 Khan SA, Gudeta DD, Aljahdali N, Chon J, Snippes Vagnone P, Nawaz MS, Foley SL, Sung K. Draft Genome Sequences of 27 Hospital-Associated Methicillin-Resistant Staphylococcus aureus Strains Isolated in Minnesota. Microbiology Resource Announcements. 11: e0118621. PMID 35084220 DOI: 10.1128/mra.01186-21  0.312
2021 Sung K, Gudeta DD, Park M, Snippes Vagnone P, Nawaz MS, Foley SL, Khan SA. Draft Genome Sequences of Eight Community-Associated Methicillin-Resistant Staphylococcus aureus Strains. Microbiology Resource Announcements. 10: e0092921. PMID 34792385 DOI: 10.1128/MRA.00929-21  0.329
2021 Foley SL, Kaldhone PR, Ricke SC, Han J. Incompatibility Group I1 (IncI1) Plasmids: Their Genetics, Biology, and Public Health Relevance. Microbiology and Molecular Biology Reviews : Mmbr. 85. PMID 33910982 DOI: 10.1128/MMBR.00031-20  0.326
2020 Aljahdali NH, Khajanchi BK, Weston K, Deck J, Cox J, Singh R, Gilbert J, Sanad YM, Han J, Nayak R, Foley SL. Genotypic and Phenotypic Characterization of Incompatibility Group FIB Positive Serovar Typhimurium Isolates from Food Animal Sources. Genes. 11. PMID 33158112 DOI: 10.3390/genes11111307  0.413
2020 Aljahdali NH, Foley SL, Han J, Sanad YM, Nayak R, Khajanchi BK. Whole-Genome Sequences of 66 Incompatibility Group FIB Plasmid-Carrying Salmonella enterica Serovar Typhimurium Isolates from Food Animal Sources. Microbiology Resource Announcements. 9. PMID 32001566 DOI: 10.1128/MRA.01435-19  0.383
2019 Kaldhone PR, Carlton A, Aljahdali N, Khajanchi BK, Sanad YM, Han J, Deck J, Ricke SC, Foley SL. Evaluation of Incompatibility Group I1 (IncI1) Plasmid-Containing and Assessment of the Plasmids in Bacteriocin Production and Biofilm Development. Frontiers in Veterinary Science. 6: 298. PMID 31552285 DOI: 10.3389/Fvets.2019.00298  0.364
2019 Aljahdali NH, Kaldhone PR, Foley SL, Khajanchi BK. Whole-Genome Sequences of 35 Incompatibility Group I1 Plasmid-Carrying Salmonella enterica Isolates from Food Animal and Clinical Sources. Microbiology Resource Announcements. 8. PMID 31467104 DOI: 10.1128/MRA.00831-19  0.351
2018 Shi Z, Kaldhone PR, Khajanchi BK, Foley SL, Ricke SC. Draft Genome Sequences of Salmonella enterica Serovar Enteritidis and Kentucky Isolates from Retail Poultry Sources. Genome Announcements. 6. PMID 29622609 DOI: 10.1128/Genomea.00193-18  0.341
2017 Kaldhone PR, Han J, Deck J, Khajanchi B, Nayak R, Foley SL, Ricke SC. Evaluation of the Genetics and Functionality of Plasmids in Incompatibility Group I1-Positive Salmonella enterica. Foodborne Pathogens and Disease. PMID 29265877 DOI: 10.1089/Fpd.2017.2332  0.344
2017 Khan AA, Khajanchi BK, Khan SA, Elkins CA, Foley SL. Draft Genome Sequences of Ciprofloxacin-Resistant Salmonella enterica Strains with Multiple-Antibiotic Resistance, Isolated from Imported Foods. Genome Announcements. 5. PMID 29122873 DOI: 10.1128/genomeA.01222-17  0.369
2017 Khajanchi BK, Hasan NA, Choi SY, Han J, Zhao S, Colwell RR, Cerniglia CE, Foley SL. Comparative genomic analysis and characterization of incompatibility group FIB plasmid encoded virulence factors of Salmonella enterica isolated from food sources. Bmc Genomics. 18: 570. PMID 28768482 DOI: 10.1186/S12864-017-3954-5  0.317
2016 Hao H, Ren N, Han J, Foley SL, Iqbal Z, Cheng G, Kuang X, Liu J, Liu Z, Dai M, Wang Y, Yuan Z. Virulence and Genomic Feature of Multidrug Resistant Campylobacter jejuni Isolated from Broiler Chicken. Frontiers in Microbiology. 7: 1605. PMID 27790202 DOI: 10.3389/fmicb.2016.01605  0.323
2016 Khajanchi BK, Han J, Gokulan K, Zhao S, Gies A, Foley SL. Draft Genome Sequences of Four Salmonella enterica Strains Isolated from Turkey-Associated Sources. Genome Announcements. 4. PMID 27738037 DOI: 10.1128/genomeA.01122-16  0.32
2015 Sanad YM, Johnson K, Park SH, Han J, Deck J, Foley SL, Kenney B, Ricke S, Nayak R. Molecular Characterization of Salmonella enterica Serovars Isolated from a Turkey Production Facility in the Absence of Selective Antimicrobial Pressure. Foodborne Pathogens and Disease. PMID 26653998 DOI: 10.1089/Fpd.2015.2002  0.38
2015 Park M, Deck J, Foley SL, Nayak R, Songer JG, Seibel JR, Khan S, Rooney AP, Hecht DW, Rafii F. Diversity of Clostridium perfringens isolates from various sources and prevalence of conjugative plasmids. Anaerobe. PMID 26608548 DOI: 10.1016/j.anaerobe.2015.11.003  0.31
2015 Beier RC, Foley SL, Davidson MK, White DG, McDermott PF, Bodeis-Jones S, Zhao S, Andrews K, Crippen TL, Sheffield CL, Poole TL, Anderson RC, Nisbet DJ. Characterization of antibiotic and disinfectant susceptibility profiles among Pseudomonas aeruginosa veterinary isolates recovered during 1994-2003. Journal of Applied Microbiology. 118: 326-42. PMID 25431276 DOI: 10.1111/jam.12707  0.31
2013 Han J, Gokulan K, Barnette D, Khare S, Rooney AW, Deck J, Nayak R, Stefanova R, Hart ME, Foley SL. Evaluation of virulence and antimicrobial resistance in Salmonella enterica serovar Enteritidis isolates from humans and chicken- and egg-associated sources. Foodborne Pathogens and Disease. 10: 1008-15. PMID 24102082 DOI: 10.1089/fpd.2013.1518  0.357
2013 Lai J, Wang Y, Shen J, Li R, Han J, Foley SL, Wu C. Unique class 1 integron and multiple resistance genes co-located on IncHI2 plasmid is associated with the emerging multidrug resistance of Salmonella Indiana isolated from chicken in China. Foodborne Pathogens and Disease. 10: 581-8. PMID 23672474 DOI: 10.1089/fpd.2012.1455  0.367
2013 Shaheen BW, Nayak R, Foley SL, Boothe DM. Chromosomal and plasmid-mediated fluoroquinolone resistance mechanisms among broad-spectrum-cephalosporin-resistant Escherichia coli isolates recovered from companion animals in the USA. The Journal of Antimicrobial Chemotherapy. 68: 1019-24. PMID 23302578 DOI: 10.1093/Jac/Dks514  0.322
2012 Han J, Lynne AM, David DE, Tang H, Xu J, Nayak R, Kaldhone P, Logue CM, Foley SL. DNA sequence analysis of plasmids from multidrug resistant Salmonella enterica serotype Heidelberg isolates. Plos One. 7: e51160. PMID 23251446 DOI: 10.1371/Journal.Pone.0051160  0.395
2012 Lin D, Foley SL, Qi Y, Han J, Ji C, Li R, Wu C, Shen J, Wang Y. Characterization of antimicrobial resistance of Pseudomonas aeruginosa isolated from canine infections Journal of Applied Microbiology. DOI: 10.1111/j.1365-2672.2012.05304.x  0.356
2012 Han J, Lynne AM, David DE, Nayak R, Foley SL. Sequencing of plasmids from a multi-antimicrobial resistant Salmonella enterica serovar Dublin strain Food Research International. 45: 931-934. DOI: 10.1016/J.Foodres.2011.04.016  0.374
2012 Marrero-Ortiz R, Han J, Lynne AM, David DE, Stemper ME, Farmer D, Burkhardt W, Nayak R, Foley SL. Genetic characterization of antimicrobial resistance in Salmonella enterica serovars isolated from dairy cattle in Wisconsin Food Research International. 45: 962-967. DOI: 10.1016/J.Foodres.2011.04.013  0.357
2012 Louden BC, Haarmann D, Han J, Foley SL, Lynne AM. Characterization of antimicrobial resistance in Salmonella enterica serovar Typhimurium isolates from food animals in the U.S Food Research International. 45: 968-972. DOI: 10.1016/J.Foodres.2011.03.055  0.349
2011 Shaheen BW, Nayak R, Foley SL, Kweon O, Deck J, Park M, Rafii F, Boothe DM. Molecular characterization of resistance to extended-spectrum cephalosporins in clinical Escherichia coli isolates from companion animals in the United States. Antimicrobial Agents and Chemotherapy. 55: 5666-75. PMID 21947397 DOI: 10.1128/Aac.00656-11  0.345
2011 Han J, David DE, Deck J, Lynne AM, Kaldhone P, Nayak R, Stefanova R, Foley SL. Comparison of Salmonella enterica serovar Heidelberg isolates from human patients with those from animal and food sources. Journal of Clinical Microbiology. 49: 1130-3. PMID 21177888 DOI: 10.1128/Jcm.01931-10  0.332
2011 Tran QT, Nawaz MS, Deck J, Foley S, Nguyen K, Cerniglia CE. Detection of type III secretion system virulence and mutations in gyrA and parC genes among quinolone-resistant strains of Pseudomonas aeruginosa isolated from imported shrimp. Foodborne Pathogens and Disease. 8: 451-3. PMID 21117986 DOI: 10.1089/fpd.2010.0687  0.331
2010 Johnson TJ, Thorsness JL, Anderson CP, Lynne AM, Foley SL, Han J, Fricke WF, McDermott PF, White DG, Khatri M, Stell AL, Flores C, Singer RS. Horizontal gene transfer of a ColV plasmid has resulted in a dominant avian clonal type of Salmonella enterica serovar Kentucky. Plos One. 5: e15524. PMID 21203520 DOI: 10.1371/Journal.Pone.0015524  0.353
2010 Melendez SN, Hanning IB, Han J, Nayak R, Clement AR, Wooming A, Hererra P, Jones FT, Foley SL, Ricke SC. Salmonella enterica isolates from pasture-raised poultry exhibit antimicrobial resistance and class I integrons Journal of Applied Microbiology. 109: 1957-1966. PMID 20722876 DOI: 10.1111/J.1365-2672.2010.04825.X  0.365
2009 Lynne AM, Dorsey LL, David DE, Foley SL. Characterisation of antibiotic resistance in host-adapted Salmonella enterica. International Journal of Antimicrobial Agents. 34: 169-72. PMID 19356907 DOI: 10.1016/J.Ijantimicag.2009.02.018  0.342
2009 Lynne AM, Kaldhone P, David D, White DG, Foley SL. Characterization of antimicrobial resistance in Salmonella enterica serotype Heidelberg isolated from food animals. Foodborne Pathogens and Disease. 6: 207-15. PMID 19099358 DOI: 10.1089/Fpd.2008.0172  0.352
2008 Kaldhone P, Nayak R, Lynne AM, David DE, McDermott PF, Logue CM, Foley SL. Characterization of Salmonella enterica serovar Heidelberg from turkey-associated sources. Applied and Environmental Microbiology. 74: 5038-46. PMID 18586966 DOI: 10.1128/Aem.00409-08  0.375
2008 Lynne AM, Rhodes-Clark BS, Bliven K, Zhao S, Foley SL. Antimicrobial resistance genes associated with Salmonella enterica serovar newport isolates from food animals. Antimicrobial Agents and Chemotherapy. 52: 353-6. PMID 17967918 DOI: 10.1128/Aac.00842-07  0.381
2008 Foley SL, Lynne AM. Food animal-associated Salmonella challenges: pathogenicity and antimicrobial resistance Journal of Animal Science. 86. PMID 17878285 DOI: 10.2527/Jas.2007-0447  0.369
2007 LYNNE AM, SKYBERG JA, LOGUE CM, DOETKOTT C, FOLEY SL, NOLAN LK. CHARACTERIZATION OF A SERIES OF TRANSCONJUGANT MUTANTS OF AN AVIAN PATHOGENIC ESCHERICHIA COLI ISOLATE FOR RESISTANCE TO SERUM COMPLEMENT Avian Diseases Digest. 2: e23-e23. DOI: 10.1637/1933-5334(2007)2[e23:COASOT]2.0.CO;2  0.324
2006 Foley SL, White DG, McDermott PF, Walker RD, Rhodes B, Fedorka-Cray PJ, Simjee S, Zhao S. Comparison of subtyping methods for differentiating Salmonella enterica serovar Typhimurium isolates obtained from food animal sources. Journal of Clinical Microbiology. 44: 3569-77. PMID 17021084 DOI: 10.1128/Jcm.00745-06  0.315
2005 Zhao S, Fedorka-Cray PJ, Friedman S, McDermott PF, Walker RD, Qaiyumi S, Foley SL, Hubert SK, Ayers S, English L, Dargatz DA, Salamone B, White DG. Characterization of Salmonella Typhimurium of animal origin obtained from the National Antimicrobial Resistance Monitoring System. Foodborne Pathogens and Disease. 2: 169-81. PMID 15992312 DOI: 10.1089/Fpd.2005.2.169  0.352
2003 Zhao S, Qaiyumi S, Friedman S, Singh R, Foley SL, White DG, McDermott PF, Donkar T, Bolin C, Munro S, Baron EJ, Walker RD. Characterization of Salmonella enterica serotype newport isolated from humans and food animals. Journal of Clinical Microbiology. 41: 5366-71. PMID 14662912 DOI: 10.1128/JCM.41.12.5366-5371.2003  0.384
2003 Nolan LK, Horne SM, Giddings CW, Foley SL, Johnson TJ, Lynne AM, Skyberg J. Resistance to serum complement, iss, and virulence of avian Escherichia coli. Veterinary Research Communications. 27: 101-10. PMID 12718504 DOI: 10.1023/A:1022854902700  0.343
2002 Nolan LK, Giddings CW, Horne SM, Doetkott C, Gibbs PS, Wooley RE, Foley SL. Complement resistance, as determined by viable count and flow cytometric methods, and its association with the presence of iss and the virulence of avian Escherichia coli. Avian Diseases. 46: 386-92. PMID 12061648 DOI: 10.1637/0005-2086(2002)046[0386:Cradbv]2.0.Co;2  0.37
2002 Johnson TJ, Giddings CW, Horne SM, Gibbs PS, Wooley RE, Skyberg J, Olah P, Kercher R, Sherwood JS, Foley SL, Nolan LK. Location of increased serum survival gene and selected virulence traits on a conjugative R plasmid in an avian Escherichia coli isolate. Avian Diseases. 46: 342-52. PMID 12061643 DOI: 10.1637/0005-2086(2002)046[0342:Loissg]2.0.Co;2  0.347
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