Narufumi Kameya - Related publications

Kanazawa University, Kanazawa-shi, Ishikawa-ken, Japan 
developmental neurobiology
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Hao Z, Li Y, Jiang Y, Xu J, Li J, Luo L. Genome Sequence Analysis of the Fungal Pathogen Using Oxford Nanopore Technology. Journal of Fungi (Basel, Switzerland). 7. PMID 34575738 DOI: 10.3390/jof7090699   
2021 Chen Z, Shen M, Mao C, Wang C, Yuan P, Wang T, Sun D. A Type I Restriction Modification System Influences Genomic Evolution Driven by Horizontal Gene Transfer in . Frontiers in Microbiology. 12: 709571. PMID 34413842 DOI: 10.3389/fmicb.2021.709571   
2021 Basso MF, Duarte KE, Santiago TR, de Souza WR, Garcia BO, da Cunha BDB, Kobayashi AK, Molinari HBC. Efficient genome editing and gene knockout in with CRISPR/Cas9 directed gene editing by the non-homologous end-joining pathway. Plant Biotechnology (Tokyo, Japan). 38: 227-238. PMID 34393601 DOI: 10.5511/plantbiotechnology.21.0407a   
2021 Molla KA, Sretenovic S, Bansal KC, Qi Y. Precise plant genome editing using base editors and prime editors. Nature Plants. 7: 1166-1187. PMID 34518669 DOI: 10.1038/s41477-021-00991-1   
2021 Lee G, Kim MJ, Shin JH. Data on complete genome sequence and annotation of LMG 24727. Data in Brief. 38: 107271. PMID 34430681 DOI: 10.1016/j.dib.2021.107271   
2021 Takeda I, Araki M, Ishiguro KI, Ohga T, Takada K, Yamaguchi Y, Hashimoto K, Kai T, Nakagata N, Imasaka M, Yoshinobu K, Araki K. Gene trapping reveals a new transcriptionally active genome element: The chromosome-specific clustered trap region. Genes to Cells : Devoted to Molecular & Cellular Mechanisms. PMID 34418226 DOI: 10.1111/gtc.12890   
2021 D'Huys L, Vitale R, Ruppeka-Rupeika E, Goyvaerts V, Ruckebusch C, Hofkens J. Assessing the Resolution of Methyltransferase-Mediated DNA Optical Mapping. Acs Omega. 6: 21276-21283. PMID 34471732 DOI: 10.1021/acsomega.1c01381   
2021 Yuan XL, Zhang CS, Kong FY, Zhang ZF, Wang FL. Genome Analysis of JM01 Provides Insights into Its Pathogenicity Mechanisms. Plants (Basel, Switzerland). 10. PMID 34451665 DOI: 10.3390/plants10081620   
2021 Pickar-Oliver A, Gough V, Bohning JD, Liu S, Robinson-Hamm JN, Daniels H, Majoros WH, Devlin G, Asokan A, Gersbach CA. Full-length Dystrophin Restoration via Targeted Genomic Integration by AAV-CRISPR in a Humanized Mouse Model of Duchenne Muscular Dystrophy. Molecular Therapy : the Journal of the American Society of Gene Therapy. PMID 34509668 DOI: 10.1016/j.ymthe.2021.09.003   
2021 Fioretti T, Di Iorio V, Lombardo B, De Falco F, Cevenini A, Cattaneo F, Testa F, Pastore L, Simonelli F, Esposito G. Molecular Characterization of Choroideremia-Associated Deletions Reveals an Unexpected Regulation of Gene Transcription. Genes. 12. PMID 34440285 DOI: 10.3390/genes12081111   
2021 Wakao S, Shih PM, Guan K, Schackwitz W, Ye J, Patel D, Shih RM, Dent RM, Chovatia M, Sharma A, Martin J, Wei CL, Niyogi KK. Discovery of photosynthesis genes through whole-genome sequencing of acetate-requiring mutants of Chlamydomonas reinhardtii. Plos Genetics. 17: e1009725. PMID 34492001 DOI: 10.1371/journal.pgen.1009725   
2021 Ding Y, Zhu J, Zhao D, Liu Q, Yang Q, Zhang T. Targeting -Regulatory Elements for Rice Grain Quality Improvement. Frontiers in Plant Science. 12: 705834. PMID 34456947 DOI: 10.3389/fpls.2021.705834   
2021 Wang H, Sha X, Li R, Li Y, Khaleque HN, Zhang Y, Bohu T, Bai Z, Zhuang X. Comparative Genome Analysis Provides Molecular Evidence for Reclassification of the Photosynthetic Bacterium EBL0706 as a Strain of . Microorganisms. 9. PMID 34442833 DOI: 10.3390/microorganisms9081754   
2021 Lee SC, Martienssen RA. Regulation of retrotransposition in Arabidopsis. Biochemical Society Transactions. PMID 34495315 DOI: 10.1042/BST20210337   
2021 Tang J, Zhao B, Li C, Hong X. Complete chloroplast genome sequence of an endangered plant (Gesneriaceae) from Guangxi, China. Mitochondrial Dna. Part B, Resources. 6: 2936-2938. PMID 34553048 DOI: 10.1080/23802359.2021.1973918   
2021 Xie Z, Dang J, Wen G, Wang H, Guo Q, Liang G. [Advances in identification methods of alien genomic components in plants]. Sheng Wu Gong Cheng Xue Bao = Chinese Journal of Biotechnology. 37: 2703-2718. PMID 34472290 DOI: 10.13345/j.cjb.200702   
2021 Schmitz RJ, Marand AP, Zhang X, Mosher RA, Turck F, Chen X, Axtell MJ, Zhong X, Brady SM, Megraw M, Meyers BC. Quality control and evaluation of plant epigenomics data. The Plant Cell. PMID 34648025 DOI: 10.1093/plcell/koab255   
2021 Wijayasekara D, Ali A. Evolutionary study of maize dwarf mosaic virus using nearly complete genome sequences acquired by next-generation sequencing. Scientific Reports. 11: 18786. PMID 34552152 DOI: 10.1038/s41598-021-98299-9   
2021 Tu JL, Bai XY, Xu YL, Li N, Xu JW. Targeted gene insertion and replacement in the basidiomycete by inactivation of non-homologous end joining using CRISPR/Cas9. Applied and Environmental Microbiology. AEM0151021. PMID 34524900 DOI: 10.1128/AEM.01510-21   
2021 Avsec Ž, Agarwal V, Visentin D, Ledsam JR, Grabska-Barwinska A, Taylor KR, Assael Y, Jumper J, Kohli P, Kelley DR. Effective gene expression prediction from sequence by integrating long-range interactions. Nature Methods. 18: 1196-1203. PMID 34608324 DOI: 10.1038/s41592-021-01252-x   
2021 Ren F, Wang L, Zhuo W, Lu S, Zhu X, Liu C, Yang M. First complete chloroplast genome of the rare medicinal plant . Mitochondrial Dna. Part B, Resources. 6: 2993-2994. PMID 34568558 DOI: 10.1080/23802359.2021.1975507   
2021 Lupande-Mwenebitu D, Khedher MB, Khabthani S, Rym L, Phoba MF, Nabti LZ, Lunguya-Metila O, Pantel A, Lavigne JP, Rolain JM, Diene SM. First Genome Description of Isolate Bearing NDM-1 from Blood Culture. Microorganisms. 9. PMID 34442831 DOI: 10.3390/microorganisms9081751   
2021 Ganesan R, Kaltenpoth M, Flórez LV. Transposon-insertion Sequencing as a Tool to Elucidate Bacterial Colonization Factors in a Burkholderia gladioli Symbiont of Lagria villosa Beetles. Journal of Visualized Experiments : Jove. PMID 34459815 DOI: 10.3791/62843   
2021 Hao H, Wang Z, Gou C, Sha S, Yan C, Niu D, Wang L, Feng H. Genome Sequence of the Agrobacterium salinitolerans DG3-1 Isolated from Cotton Roots. Molecular Plant-Microbe Interactions : Mpmi. PMID 34533971 DOI: 10.1094/MPMI-06-21-0154-A   
2021 Contreras-Moreira B, Filippi CV, Naamati G, García Girón C, Allen JE, Flicek P. K-mer counting and curated libraries drive efficient annotation of repeats in plant genomes. The Plant Genome. e20143. PMID 34562304 DOI: 10.1002/tpg2.20143   
2021 Liu Y, Huang L, Hu H, Cai M, Liang X, Li X, Zhang Z, Xie Y, Xiao C, Chen S, Chen D, Yong T, Pan H, Gao X, Wu Q. Whole-genome assembly of Ganoderma leucocontextum (Ganodermataceae, Fungi) discovered from the Tibetan Plateau of China. G3 (Bethesda, Md.). PMID 34586388 DOI: 10.1093/g3journal/jkab337   
2021 Kirschner GK, Rosignoli S, Guo L, Vardanega I, Imani J, Altmüller J, Milner SG, Balzano R, Nagel KA, Pflugfelder D, Forestan C, Bovina R, Koller R, Stöcker TG, Mascher M, et al. encodes a STERILE ALPHA MOTIF-containing protein that controls root growth angle in barley and wheat. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34446550 DOI: 10.1073/pnas.2101526118   
2021 Hodor P, Pope CE, Whitlock KB, Hoffman LR, Limbrick DL, McDonald PJ, Hauptman JS, Ojemann JG, Simon TD. Molecular Characterization of Microbiota in Cerebrospinal Fluid From Patients With CSF Shunt Infections Using Whole Genome Amplification Followed by Shotgun Sequencing. Frontiers in Cellular and Infection Microbiology. 11: 699506. PMID 34490140 DOI: 10.3389/fcimb.2021.699506   
2021 Ma Y, Chen Z, Yu J. Pseudogenes and their potential functions in hematopoiesis. Experimental Hematology. PMID 34517065 DOI: 10.1016/j.exphem.2021.09.001   
2021 Chen K, Ke R, Du M, Yi Y, Chen Y, Wang X, Yao L, Liu H, Hou X, Xiong L, Yang Y, Xie K. A FLASH pipeline for arrayed CRISPR library construction and the gene function discovery of rice receptor-like kinases. Molecular Plant. PMID 34619328 DOI: 10.1016/j.molp.2021.09.015   
2021 Perry MN, Smith CL. Murine allele and transgene symbols: ensuring unique, concise, and informative nomenclature. Mammalian Genome : Official Journal of the International Mammalian Genome Society. PMID 34389871 DOI: 10.1007/s00335-021-09902-3   
2021 Yang C, Sun J, Zhang S, Wang J, Zhang S, Yu M, Cao M. Complete genome sequence of a putative new and distinct caulimovirus from Metaplexis japonica (Thunb.) Makino in China. Archives of Virology. PMID 34537925 DOI: 10.1007/s00705-021-05246-0   
2021 Sachla AJ, Alfonso AJ, Helmann JD. A Simplified Method for CRISPR-Cas9 Engineering of Bacillus subtilis. Microbiology Spectrum. e0075421. PMID 34523974 DOI: 10.1128/Spectrum.00754-21   
2021 Safder I, Shao G, Sheng Z, Hu P, Tang S. Genome-wide identification studies - A primer to explore new genes in plant species. Plant Biology (Stuttgart, Germany). PMID 34558163 DOI: 10.1111/plb.13340   
2021 Zhuo Z, Rong W, Li H, Li Y, Luo X, Liu Y, Tang X, Zhang L, Su F, Cui H, Xiao F. Long-read sequencing reveals the structural complexity of genomic integration of HBV DNA in hepatocellular carcinoma. Npj Genomic Medicine. 6: 84. PMID 34642322 DOI: 10.1038/s41525-021-00245-1   
2021 Driguez P, Bougouffa S, Carty K, Putra A, Jabbari K, Reddy M, Soppe R, Cheung MS, Fukasawa Y, Ermini L. LeafGo: Leaf to Genome, a quick workflow to produce high-quality de novo plant genomes using long-read sequencing technology. Genome Biology. 22: 256. PMID 34479618 DOI: 10.1186/s13059-021-02475-z   
2021 Zhuo W, Wang L, Zhu X, Lu S, Ren F. Characterization of the first chloroplast genome of and its phylogenetic analysis. Mitochondrial Dna. Part B, Resources. 6: 2991-2992. PMID 34568557 DOI: 10.1080/23802359.2021.1975506   
2021 Alabi N, Wu Y, Bossdorf O, Rieseberg LH, Colautti RI. Genome Report: A draft genome of Alliaria petiolata (garlic mustard) as a model system for invasion genetics. G3 (Bethesda, Md.). PMID 34599816 DOI: 10.1093/g3journal/jkab339   
2021 Mohammadi M, Smith EA, Stanghellini ME, Kaundal R. Insights into the Host Specificity of a New Oomycete Root Pathogen, P1: Whole Genome Sequencing and Comparative Analysis Reveals Contracted Regulation of Metabolism, Protein Families, and Distinct Pathogenicity Repertoire. International Journal of Molecular Sciences. 22. PMID 34445718 DOI: 10.3390/ijms22169002   
2021 Zhao H, Feng Q, Wang X, Liu Y, Qian S, Xu L, Xie Z. Complete Genome Sequences of Two WU Polyomaviruses Detected in Pediatric Patients with Fatal Respiratory Infection. Microbiology Resource Announcements. 10: e0005221. PMID 34498922 DOI: 10.1128/MRA.00052-21   
2021 Jiang T, Yin Z, Cai R, Yu H, Lu Q, Zhao S, Tian Y, Yan Y, Chen X, Guo J. Chromosomal-level Genome Assembly of a True Bug, Aspongopus chinensis Dallas, 1851 (Hemiptera: Dinidoridae). Genome Biology and Evolution. PMID 34623414 DOI: 10.1093/gbe/evab232   
2021 Jiang M, Zhu Y, Wu Q, Zhang H. Complete chloroplast genome of a rare and endangered plant species : genomic features and phylogenetic relationship within Orchidaceae. Mitochondrial Dna. Part B, Resources. 6: 2872-2879. PMID 34532575 DOI: 10.1080/23802359.2021.1972049   
2021 Zhang S, Bai X, Ren LY, Sun HH, Tang HP, Vaario LM, Xu J, Zhang YJ. Dynamic Evolution of Eukaryotic Mitochondrial and Nuclear Genomes: A Case Study in the Gourmet Pine Mushroom Tricholoma matsutake. Environmental Microbiology. PMID 34587365 DOI: 10.1111/1462-2920.15792   
2021 Zhang Y, Deng C, Yang J, Wang D, Deng G. The complete chloroplast genome of a medicinal plant Burm.f. (Loranthaceae). Mitochondrial Dna. Part B, Resources. 6: 2635-2637. PMID 34435106 DOI: 10.1080/23802359.2021.1962760   
2021 Wang J, Xu J, Yang X, Xu S, Zhang M, Lu F. Boosting power of transcriptomics by developing an efficient gene expression profiling approach. Plant Biotechnology Journal. PMID 34510693 DOI: 10.1111/pbi.13706   
2021 Malhotra EV, Jain R, Bansal S, Mali SC, Sharma N, Agrawal A. Development of a new set of genic SSR markers in the genus : in silico mining, characterization and validation. 3 Biotech. 11: 430. PMID 34527507 DOI: 10.1007/s13205-021-02969-4   
2021 Chen H, Chong X, Zhou Y, Sun L, Zhang F, Lu X, Li N, Zhou T, Li Y. Characterization and phylogenetic analysis of the complete chloroplast genome of , traditional Chinese medicine plant. Mitochondrial Dna. Part B, Resources. 6: 2791-2792. PMID 34514128 DOI: 10.1080/23802359.2021.1967804   
2021 Hahn EE, Alexander MR, Grealy A, Stiller J, Gardiner DM, Holleley CE. Unlocking inaccessible historical genomes preserved in formalin. Molecular Ecology Resources. PMID 34549888 DOI: 10.1111/1755-0998.13505   
2021 Wang Y, Zhang Y, Li C, Zhao B. Characterization of the complete chloroplast genome of (Asparagaceae). Mitochondrial Dna. Part B, Resources. 6: 2754-2756. PMID 34471695 DOI: 10.1080/23802359.2021.1967801   
2021 Lv Q, Liang B, Guo X. The complete chloroplast genome sequence of (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis. Mitochondrial Dna. Part B, Resources. 6: 2770-2771. PMID 34447894 DOI: 10.1080/23802359.2021.1967812