David Mangus - Related publications

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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Lucchesi C, Mohibi S, Chen X. Measuring Translation Efficiency by RNA Immunoprecipitation of Translation Initiation Factors. Methods in Molecular Biology (Clifton, N.J.). 2267: 73-79. PMID 33786785 DOI: 10.1007/978-1-0716-1217-0_5   
2021 Song P, Yang F, Jin H, Wang X. The regulation of protein translation and its implications for cancer. Signal Transduction and Targeted Therapy. 6: 68. PMID 33597534 DOI: 10.1038/s41392-020-00444-9   
2021 Das S, Vera M, Gandin V, Singer RH, Tutucci E. Intracellular mRNA transport and localized translation. Nature Reviews. Molecular Cell Biology. PMID 33837370 DOI: 10.1038/s41580-021-00356-8   
2021 Winata CL, Łapiński M, Ismail H, Mathavan S, Sampath P. Exploring Translational Control of Maternal mRNAs in Zebrafish. Methods in Molecular Biology (Clifton, N.J.). 2218: 367-380. PMID 33606246 DOI: 10.1007/978-1-0716-0970-5_29   
2021 Doenier J, Lynch T, Kimble J, Aoki ST. An improved in vivo tethering assay with single molecule FISH reveals that a nematode Nanos enhances reporter expression and mRNA stability. Rna (New York, N.Y.). PMID 33727224 DOI: 10.1261/rna.078693.121   
2021 Mishima Y, Inoue K. Tethered Function Assay to Study RNA-Regulatory Proteins in Zebrafish Embryos. Methods in Molecular Biology (Clifton, N.J.). 2218: 347-354. PMID 33606244 DOI: 10.1007/978-1-0716-0970-5_27   
2021 Vinter DJ, Hoppe C, Minchington TG, Sutcliffe C, Ashe HL. Dynamics of translation in real time and at single mRNA resolution in the embryo. Development (Cambridge, England). PMID 33722899 DOI: 10.1242/dev.196121   
2021 Gaikwad S, Ghobakhlou F, Young DJ, Visweswaraiah J, Zhang H, Hinnebusch AG. Reprogramming of translation in yeast cells impaired for ribosome recycling favors short, efficiently translated mRNAs. Elife. 10. PMID 33764298 DOI: 10.7554/eLife.64283   
2021 Kim J, Goñi-Moreno A, de Lorenzo V. Subcellular Architecture of the Gene Expression Flow of the TOL Catabolic Plasmid of Pseudomonas putida mt-2. Mbio. 12. PMID 33622725 DOI: 10.1128/mBio.03685-20   
2021 Vo DK, Engler A, Stoimenovski D, Hartig R, Kaehne T, Kalinski T, Naumann M, Haybaeck J, Nass N. Interactome Mapping of eIF3A in a Colon Cancer and an Immortalized Embryonic Cell Line Using Proximity-Dependent Biotin Identification. Cancers. 13. PMID 33799492 DOI: 10.3390/cancers13061293   
2021 Zhang W, Liu Y, Min Chin J, K L Phua K. Sustained release of PKR inhibitor C16 from mesoporous silica nanoparticles significantly enhances mRNA translation and anti-tumor vaccination. European Journal of Pharmaceutics and Biopharmaceutics : Official Journal of Arbeitsgemeinschaft Fur Pharmazeutische Verfahrenstechnik E.V. PMID 33771622 DOI: 10.1016/j.ejpb.2021.03.011   
2021 Morais P, Adachi H, Yu YT. Spliceosomal snRNA Epitranscriptomics. Frontiers in Genetics. 12: 652129. PMID 33737950 DOI: 10.3389/fgene.2021.652129   
2021 van Dülmen M, Muthmann N, Rentmeister A. Chemo-enzymatic modification of the 5' cap maintains translation and increases immunogenic properties of mRNA. Angewandte Chemie (International Ed. in English). PMID 33751748 DOI: 10.1002/anie.202100352   
2021 Caizzi L, Monteiro-Martins S, Schwalb B, Lysakovskaia K, Schmitzova J, Sawicka A, Chen Y, Lidschreiber M, Cramer P. Efficient RNA polymerase II pause release requires U2 snRNP function. Molecular Cell. PMID 33689748 DOI: 10.1016/j.molcel.2021.02.016   
2021 Fernández-Fernández R, Hernández SB, Puerta-Fernández E, Sánchez-Romero MA, Urdaneta V, Casadesús J. Evidence for Involvement of the Z-Ring Assembly Factors ZapA and ZapB in Resistance to Bile. Frontiers in Microbiology. 12: 647305. PMID 33717045 DOI: 10.3389/fmicb.2021.647305   
2021 Fernández-Fernández R, Hernández SB, Puerta-Fernández E, Sánchez-Romero MA, Urdaneta V, Casadesús J. Evidence for Involvement of the Z-Ring Assembly Factors ZapA and ZapB in Resistance to Bile. Frontiers in Microbiology. 12: 647305. PMID 33717045 DOI: 10.3389/fmicb.2021.647305   
2021 Kimberlin A, Holtsclaw RE, Koo AJ. Differential Regulation of the Ribosomal Association of mRNA Transcripts in an Mutant Defective in Jasmonate-Dependent Wound Response. Frontiers in Plant Science. 12: 637959. PMID 33777072 DOI: 10.3389/fpls.2021.637959   
2021 Kathare PK, Huq E. Light-regulated pre-mRNA splicing in plants. Current Opinion in Plant Biology. 63: 102037. PMID 33823333 DOI: 10.1016/j.pbi.2021.102037   
2021 Kumar S, Mohapatra T. Deciphering Epitranscriptome: Modification of mRNA Bases Provides a New Perspective for Post-transcriptional Regulation of Gene Expression. Frontiers in Cell and Developmental Biology. 9: 628415. PMID 33816473 DOI: 10.3389/fcell.2021.628415   
2021 Wang X, Lin L, Zhong Y, Feng M, Yu T, Yan Y, Zhou J, Liao M. Cellular hnRNPAB binding to viral nucleoprotein inhibits flu virus replication by blocking nuclear export of viral mRNA. Iscience. 24: 102160. PMID 33681726 DOI: 10.1016/j.isci.2021.102160   
2021 Chen X, Dickman D. Tissue-Specific Ribosome Profiling in Drosophila. Methods in Molecular Biology (Clifton, N.J.). 2252: 175-188. PMID 33765275 DOI: 10.1007/978-1-0716-1150-0_7   
2021 Wang J, Wang C, Li L, Yang L, Wang S, Ning X, Gao S, Ren L, Chaulagain A, Tang J, Wang T. Alternative splicing: An important regulatory mechanism in colorectal carcinoma. Molecular Carcinogenesis. PMID 33629774 DOI: 10.1002/mc.23291   
2021 Aslan C, Kiaie SH, Zolbanin NM, Lotfinejad P, Ramezani R, Kashanchi F, Jafari R. Exosomes for mRNA delivery: a novel biotherapeutic strategy with hurdles and hope. Bmc Biotechnology. 21: 20. PMID 33691652 DOI: 10.1186/s12896-021-00683-w   
2021 Castelli LM, Huang WP, Lin YH, Chang KY, Hautbergue GM. Mechanisms of repeat-associated non-AUG translation in neurological microsatellite expansion disorders. Biochemical Society Transactions. PMID 33729487 DOI: 10.1042/BST20200690   
2021 Xie W, Zhu H, Zhao M, Wang L, Li S, Zhao C, Zhou Y, Zhu B, Jiang X, Liu W, Ren C. Crucial roles of different RNA-binding hnRNP proteins in Stem Cells. International Journal of Biological Sciences. 17: 807-817. PMID 33767590 DOI: 10.7150/ijbs.55120   
2021 Cieśla M, Ngoc PCT, Cordero E, Martinez ÁS, Morsing M, Muthukumar S, Beneventi G, Madej M, Munita R, Jönsson T, Lövgren K, Ebbesson A, Nodin B, Hedenfalk I, Jirström K, et al. Oncogenic translation directs spliceosome dynamics revealing an integral role for SF3A3 in breast cancer. Molecular Cell. PMID 33662273 DOI: 10.1016/j.molcel.2021.01.034   
2021 Lee PJ, Yang S, Sun Y, Guo JU. Regulation of nonsense-nediated mRNA decay in neural development and disease. Journal of Molecular Cell Biology. PMID 33783512 DOI: 10.1093/jmcb/mjab022   
2021 Zhao LW, Fan HY. Revisiting poly(A)-binding proteins: Multifaceted regulators during gametogenesis and early embryogenesis. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. e2000335. PMID 33830517 DOI: 10.1002/bies.202000335   
2021 Melior H, Li S, Stötzel M, Maaß S, Schütz R, Azarderakhsh S, Shevkoplias A, Barth-Weber S, Baumgardt K, Ziebuhr J, Förstner KU, Chervontseva Z, Becher D, Evguenieva-Hackenberg E. Reprograming of sRNA target specificity by the leader peptide peTrpL in response to antibiotic exposure. Nucleic Acids Research. PMID 33619526 DOI: 10.1093/nar/gkab093   
2021 Melior H, Li S, Stötzel M, Maaß S, Schütz R, Azarderakhsh S, Shevkoplias A, Barth-Weber S, Baumgardt K, Ziebuhr J, Förstner KU, Chervontseva Z, Becher D, Evguenieva-Hackenberg E. Reprograming of sRNA target specificity by the leader peptide peTrpL in response to antibiotic exposure. Nucleic Acids Research. PMID 33619526 DOI: 10.1093/nar/gkab093   
2021 Ha J, Jang H, Choi N, Oh J, Min C, Pradella D, Jung DW, Williams DR, Park D, Ghigna C, Zheng X, Shen H. SRSF9 Regulates Cassette Exon Splicing of Caspase-2 by Interacting with Its Downstream Exon. Cells. 10. PMID 33808656 DOI: 10.3390/cells10030679   
2021 Tang Q, Nie F, Kang J, Chen W. mRNALocater: enhance the prediction accuracy of eukaryotic mRNA subcellular localization by using model fusion strategy. Molecular Therapy : the Journal of the American Society of Gene Therapy. PMID 33823302 DOI: 10.1016/j.ymthe.2021.04.004   
2021 Davis ZH, Mediani L, Antoniani F, Vinet J, Li S, Alberti S, Lu B, Holehouse AS, Carra S, Brandman O. Protein products of nonstop mRNA disrupt nucleolar homeostasis. Cell Stress & Chaperones. PMID 33619693 DOI: 10.1007/s12192-021-01200-w   
2021 Rathner A, Rathner P, Friedrich A, Wießner M, Kitzler CM, Schernthaner J, Karl T, Krauß J, Lottspeich F, Mewes W, Hintner H, Bauer JW, Breitenbach M, Müller N, Breitenbach-Koller H, et al. Drug Development for Target Ribosomal Protein rpL35/uL29 for Repair of LAMB3R635X in Rare Skin Disease Epidermolysis Bullosa. Skin Pharmacology and Physiology. 1-16. PMID 33823521 DOI: 10.1159/000513260   
2021 Quarato P, Singh M, Cornes E, Li B, Bourdon L, Mueller F, Didier C, Cecere G. Germline inherited small RNAs facilitate the clearance of untranslated maternal mRNAs in C. elegans embryos. Nature Communications. 12: 1441. PMID 33664268 DOI: 10.1038/s41467-021-21691-6   
2021 Guo Z, Shafik AM, Jin P, Wu Z, Wu H. Detecting m6A methylation regions from Methylated RNA Immunoprecipitation Sequencing. Bioinformatics (Oxford, England). PMID 33724304 DOI: 10.1093/bioinformatics/btab181   
2021 Li C, Han T, Li Q, Zhang M, Guo R, Yang Y, Lu W, Li Z, Peng C, Wu P, Tian X, Wang Q, Wang Y, Zhou V, Han Z, et al. MKRN3-mediated ubiquitination of Poly(A)-binding proteins modulates the stability and translation of GNRH1 mRNA in mammalian puberty. Nucleic Acids Research. PMID 33744966 DOI: 10.1093/nar/gkab155   
2021 Liu L, Liu X, Bi W, Alcorn JL. A Primate-Specific RNA-Binding Protein (RBMXL3) Is Involved in Glucocorticoid Regulation of Human Pulmonary Surfactant Protein B (SP-B) mRNA Stability. American Journal of Physiology. Lung Cellular and Molecular Physiology. PMID 33719563 DOI: 10.1152/ajplung.00022.2020   
2021 Chu J, Robert F, Pelletier J. Trans-spliced mRNA Products Produced from circRNA Expression Vectors. Rna (New York, N.Y.). PMID 33762403 DOI: 10.1261/rna.078261.120   
2021 Brader ML, Williams SJ, Banks JM, Hui WH, Zhou ZH, Jin L. Encapsulation state of messenger RNA inside lipid nanoparticles. Biophysical Journal. PMID 33773963 DOI: 10.1016/j.bpj.2021.03.012   
2021 Zhang D, Chen C, Wang H, Niu E, Zhao P, Fang S, Zhu G, Shang X, Guo W. Cotton Fiber Development Requires the Pentatricopeptide Repeat Protein GhIm for Splicing of Mitochondrial nad7 mRNA. Genetics. 217: 1-17. PMID 33683356 DOI: 10.1093/genetics/iyaa017   
2021 Ma W, Zheng G, Xie W, Mayr C. reconstitution finds multivalent RNA-RNA interactions as drivers of mesh-like condensates. Elife. 10. PMID 33650968 DOI: 10.7554/eLife.64252   
2021 Simpson E, Chen S, Reiter JL, Liu Y. Differential Splicing of Skipped-exons Predicts Drug Response in Cancer Cell Lines. Genomics, Proteomics & Bioinformatics. PMID 33662622 DOI: 10.1016/j.gpb.2019.08.003   
2021 Jensen BC, Phan IQ, McDonald JR, Sur A, Gillespie MA, Ranish JA, Parsons M, Myler PJ. Chromatin-Associated Protein Complexes Link DNA Base J and Transcription Termination in . Msphere. 6. PMID 33627513 DOI: 10.1128/mSphere.01204-20   
2021 Tehfe A, Roseshter T, Wei Y, Xia X. Does Require Specific Post-Translational Silencing against Leaky Translation of Hac1up? Microorganisms. 9. PMID 33802931 DOI: 10.3390/microorganisms9030620   
2021 Liu X, Andrews MV, Skinner JP, Johanson TM, Chong MMW. A comparison of alternative mRNA splicing in the CD4 and CD8 T cell lineages. Molecular Immunology. 133: 53-62. PMID 33631555 DOI: 10.1016/j.molimm.2021.02.009   
2021 Zhu H, Li J, Li Y, Zheng Z, Guan H, Wang H, Tao K, Liu J, Wang Y, Zhang W, Li C, Li J, Jia L, Bai W, Hu D. Glucocorticoid counteracts cellular mechanoresponses by LINC01569-dependent glucocorticoid receptor-mediated mRNA decay. Science Advances. 7. PMID 33627425 DOI: 10.1126/sciadv.abd9923   
2021 Mou T, Pawitan Y, Stahl M, Vesterlund M, Deng W, Jafari R, Bohlin A, Österroos A, Siavelis L, Bäckvall H, Erkers T, Kiviluoto S, Seashore-Ludlow B, Östling P, Orre LM, et al. The transcriptome-wide landscape of molecular subtype-specific mRNA expression profiles in acute myeloid leukemia. American Journal of Hematology. PMID 33625756 DOI: 10.1002/ajh.26141   
2021 Jian H, Zhang C, Qi Z, Li X, Lou Y, Kang Y, Deng W, Lv Y, Wang C, Wang W, Shang S, Hou M, Zhou H, Feng S. Alteration of mRNA 5-Methylcytosine Modification in Neurons After OGD/R and Potential Roles in Cell Stress Response and Apoptosis. Frontiers in Genetics. 12: 633681. PMID 33613646 DOI: 10.3389/fgene.2021.633681   
2021 Kenny A, Morgan MB, Macdonald PM. Different roles for the adjoining and structurally similar A-rich and poly(A) domains of oskar mRNA: Only the A-rich domain is required for oskar noncoding RNA function, which includes MTOC positioning. Developmental Biology. PMID 33798537 DOI: 10.1016/j.ydbio.2021.03.021