Akihito Fukudome - Publications

Affiliations: 
Biology Indiana University, Bloomington, Bloomington, IN, United States 

16 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Urayama SI, Fukudome A, Hirai M, Okumura T, Nishimura Y, Takaki Y, Kurosawa N, Koonin EV, Krupovic M, Nunoura T. Distinct groups of RNA viruses associated with thermoacidophilic bacteria. Biorxiv : the Preprint Server For Biology. PMID 37790367 DOI: 10.1101/2023.07.02.547447  0.54
2022 Fukudome A, Ishiga Y, Nagashima Y, Davidson KH, Chou HA, Mysore KS, Koiwa H. Functional diversity of Medicago truncatula RNA polymerase II CTD phosphatase isoforms produced in the Arabidopsis thaliana superexpression platform. Plant Science : An International Journal of Experimental Plant Biology. 321: 111309. PMID 35696909 DOI: 10.1016/j.plantsci.2022.111309  0.519
2022 Loffer A, Singh J, Fukudome A, Mishra V, Wang F, Pikaard CS. A DCL3 dicing code within Pol IV-RDR2 transcripts diversifies the siRNA pool guiding RNA-directed DNA methylation. Elife. 11. PMID 35098919 DOI: 10.7554/eLife.73260  0.369
2021 Fukudome A, Singh J, Mishra V, Reddem E, Martinez-Marquez F, Wenzel S, Yan R, Shiozaki M, Yu Z, Wang JC, Takagi Y, Pikaard CS. Structure and RNA template requirements of RNA-DEPENDENT RNA POLYMERASE 2. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34903670 DOI: 10.1073/pnas.2115899118  0.799
2021 Mishra V, Singh J, Wang F, Zhang Y, Fukudome A, Trinidad JC, Takagi Y, Pikaard CS. Assembly of a dsRNA synthesizing complex: RNA-DEPENDENT RNA POLYMERASE 2 contacts the largest subunit of NUCLEAR RNA POLYMERASE IV. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33753485 DOI: 10.1073/pnas.2019276118  0.795
2018 Fukudome A, Koiwa H. Cytokinin-overinduced transcription factors and thalianol cluster genes in CARBOXYL-TERMINAL DOMAIN PHOSPHATASE-LIKE 4-silenced Arabidopsis roots during de novo shoot organogenesis. Plant Signaling & Behavior. 13: e1513299. PMID 30188775 DOI: 10.1080/15592324.2018.1513299  0.376
2018 Fukudome A, Goldman JS, Finlayson SA, Koiwa H. Silencing Arabidopsis CARBOXYL-TERMINAL DOMAIN PHOSPHATASE-LIKE 4 induces cytokinin-oversensitive de novo shoot organogenesis. The Plant Journal : For Cell and Molecular Biology. PMID 29573374 DOI: 10.1111/Tpj.13895  0.411
2017 Fukudome A, Sun D, Zhang X, Koiwa H. Salt Stress and CTD PHOSPHATASE-LIKE 4 Mediate the Switch Between Production of Small Nuclear RNAs and mRNAs. The Plant Cell. PMID 29093215 DOI: 10.1105/Tpc.17.00331  0.626
2017 Seta A, Tabara M, Nishibori Y, Hiraguri A, Ohkama-Ohtsu N, Yokoyama T, Hara S, Yoshida K, Hisabori T, Fukudome A, Koiwa H, Moriyama H, Takahashi N, Fukuhara T. Post-Translational Regulation of the Dicing Activities of Arabidopsis DICER-LIKE 3 and 4 by Inorganic Phosphate and the Redox State. Plant & Cell Physiology. 58: 485-495. PMID 28069892 DOI: 10.1093/Pcp/Pcw226  0.588
2017 Sawano H, Matsuzaki T, Usui T, Tabara M, Fukudome A, Kanaya A, Tanoue D, Hiraguri A, Horiguchi G, Ohtani M, Demura T, Kozaki T, Ishii K, Moriyama H, Fukuhara T. Double-stranded RNA-binding protein DRB3 negatively regulates anthocyanin biosynthesis by modulating PAP1 expression in Arabidopsis thaliana. Journal of Plant Research. 130: 45-55. PMID 27995376 DOI: 10.1007/s10265-016-0886-0  0.449
2017 Fukudome A, Fukuhara T. Plant dicer-like proteins: double-stranded RNA-cleaving enzymes for small RNA biogenesis. Journal of Plant Research. 130: 33-44. PMID 27885504 DOI: 10.1007/s10265-016-0877-1  0.757
2014 Fukudome A, Aksoy E, Wu X, Kumar K, Jeong IS, May K, Russell WK, Koiwa H. Arabidopsis CPL4 is an essential C-terminal domain phosphatase that suppresses xenobiotic stress responses. The Plant Journal : For Cell and Molecular Biology. 80: 27-39. PMID 25041272 DOI: 10.1111/Tpj.12612  0.373
2014 Nagano H, Fukudome A, Hiraguri A, Moriyama H, Fukuhara T. Distinct substrate specificities of Arabidopsis DCL3 and DCL4. Nucleic Acids Research. 42: 1845-56. PMID 24214956 DOI: 10.1093/nar/gkt1077  0.838
2013 Jeong IS, Fukudome A, Aksoy E, Bang WY, Kim S, Guan Q, Bahk JD, May KA, Russell WK, Zhu J, Koiwa H. Regulation of abiotic stress signalling by Arabidopsis C-terminal domain phosphatase-like 1 requires interaction with a k-homology domain-containing protein. Plos One. 8: e80509. PMID 24303021 DOI: 10.1371/Journal.Pone.0080509  0.364
2013 Jeong IS, Aksoy E, Fukudome A, Akhter S, Hiraguri A, Fukuhara T, Bahk JD, Koiwa H. Arabidopsis C-terminal domain phosphatase-like 1 functions in miRNA accumulation and DNA methylation. Plos One. 8: e74739. PMID 24058624 DOI: 10.1371/Journal.Pone.0074739  0.485
2011 Fukudome A, Kanaya A, Egami M, Nakazawa Y, Hiraguri A, Moriyama H, Fukuhara T. Specific requirement of DRB4, a dsRNA-binding protein, for the in vitro dsRNA-cleaving activity of Arabidopsis Dicer-like 4. Rna (New York, N.Y.). 17: 750-60. PMID 21270136 DOI: 10.1261/rna.2455411  0.685
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