Genevera Allen - Publications

Affiliations: 
Electrical and Computer Engineering Rice University, Houston, TX 

0/26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
Low-probability matches
2015 Tomson SN, Schreiner MJ, Narayan M, Rosser T, Enrique N, Silva AJ, Allen GI, Bookheimer SY, Bearden CE. Resting state functional MRI reveals abnormal network connectivity in neurofibromatosis 1. Human Brain Mapping. 36: 4566-81. PMID 26304096 DOI: 10.1002/hbm.22937  0.2
2016 Wan YW, Allen GI, Baker Y, Yang E, Ravikumar P, Anderson M, Liu Z. XMRF: an R package to fit Markov Networks to high-throughput genetics data. Bmc Systems Biology. 10: 69. PMID 27586041 DOI: 10.1186/s12918-016-0313-0  0.16
2016 Chi EC, Allen GI, Baraniuk RG. Convex biclustering. Biometrics. PMID 27163413 DOI: 10.1111/biom.12540  0.16
2016 Narayan M, Allen GI. Mixed Effects Models for Resampled Network Statistics Improves Statistical Power to Find Differences in Multi-Subject Functional Connectivity. Frontiers in Neuroscience. 10: 108. PMID 27147940 DOI: 10.3389/fnins.2016.00108  0.16
2016 Allen GI, Amoroso N, Anghel C, Balagurusamy V, Bare CJ, Beaton D, Bellotti R, Bennett DA, Boehme K, Boutros PC, Caberlotto L, Caloian C, Campbell F, Neto EC, Chang YC, et al. Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. PMID 27079753 DOI: 10.1016/j.jalz.2016.02.006  0.16
2015 Wan YW, Allen GI, Liu Z. TCGA2STAT: Simple TCGA Data Access for Integrated Statistical Analysis in R. Bioinformatics (Oxford, England). PMID 26568634 DOI: 10.1093/bioinformatics/btv677  0.16
2015 Hu Y, Allen GI. Local-aggregate modeling for big data via distributed optimization: Applications to neuroimaging. Biometrics. PMID 26295449 DOI: 10.1111/biom.12355  0.16
2014 Wan YW, Mach CM, Allen GI, Anderson ML, Liu Z. On the reproducibility of TCGA ovarian cancer microRNA profiles. Plos One. 9: e87782. PMID 24489963 DOI: 10.1371/journal.pone.0087782  0.16
2013 Zhang W, Wan YW, Allen GI, Pang K, Anderson ML, Liu Z. Molecular pathway identification using biological network-regularized logistic models. Bmc Genomics. 14: S7. PMID 24564637 DOI: 10.1186/1471-2164-14-S8-S7  0.16
2013 Allen GI, Peterson C, Vannucci M, Maletić-Savatić M. Regularized Partial Least Squares with an Application to NMR Spectroscopy. Statistical Analysis and Data Mining. 6: 302-314. PMID 24511361 DOI: 10.1002/sam.11169  0.16
2013 Chi EC, Allen GI, Zhou H, Kohannim O, Lange K, Thompson PM. IMAGING GENETICS VIA SPARSE CANONICAL CORRELATION ANALYSIS. Proceedings / Ieee International Symposium On Biomedical Imaging: From Nano to Macro. Ieee International Symposium On Biomedical Imaging. 2013: 740-743. PMID 24443689 DOI: 10.1109/ISBI.2013.6556581  0.16
2013 Tomson SN, Narayan M, Allen GI, Eagleman DM. Neural networks of colored sequence synesthesia. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 14098-106. PMID 23986245 DOI: 10.1523/JNEUROSCI.5131-12.2013  0.16
2013 Harshman LC, Yu RJ, Allen GI, Srinivas S, Gill HS, Chung BI. Surgical outcomes and complications associated with presurgical tyrosine kinase inhibition for advanced renal cell carcinoma (RCC) Urologic Oncology: Seminars and Original Investigations. 31: 379-385. PMID 21353796 DOI: 10.1016/j.urolonc.2011.01.005  0.16
2010 Harshman LC, Bepler G, Zheng Z, Higgins JP, Allen GI, Srinivas S. Ribonucleotide reductase subunit M1 expression in resectable, muscle-invasive urothelial cancer correlates with survival in younger patients Bju International. 106: 1805-1811. PMID 20438561 DOI: 10.1111/j.1464-410X.2010.09327.x  0.16
2020 Weylandt M, Nagorski J, Allen GI. Dynamic Visualization and Fast Computation for Convex Clustering via Algorithmic Regularization. Journal of Computational and Graphical Statistics : a Joint Publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America. 29: 87-96. PMID 32982130 DOI: 10.1080/10618600.2019.1629943  0.01
2020 Morris JS, Hassan MM, Zohner YE, Wang Z, Xiao L, Rashid A, Haque A, Abdel-Wahab R, Mohamed YA, Ballard KL, Wolff RA, George B, Li L, Allen G, Weylandt M, et al. HepatoScore-14: Measures of biological heterogeneity significantly improve prediction of hepatocellular carcinoma risk. Hepatology (Baltimore, Md.). PMID 32931023 DOI: 10.1002/hep.31555  0.01
2019 Zhang Z, Allen GI, Zhu H, Dunson D. Tensor network factorizations: Relationships between brain structural connectomes and traits. Neuroimage. PMID 31029870 DOI: 10.1016/j.neuroimage.2019.04.027  0.01
2018 Nagorski J, Allen GI. Genomic region detection via Spatial Convex Clustering. Plos One. 13: e0203007. PMID 30204756 DOI: 10.1371/journal.pone.0203007  0.01
2018 Yi H, Raman AT, Zhang H, Allen GI, Liu Z. Detecting hidden batch factors through data-adaptive adjustment for biological effects. Bioinformatics (Oxford, England). 34: 1141-1147. PMID 29617963 DOI: 10.1093/bioinformatics/btx635  0.01
2017 Zhao Z, Liu Z, Chen K, Guo Y, Allen GI, Zhang J, Jim Zheng W, Ruan J. The International Conference on Intelligent Biology and Medicine (ICIBM) 2016: summary and innovation in genomics. Bmc Genomics. 18: 703. PMID 28984207 DOI: 10.1186/s12864-017-4018-6  0.01
2017 Liu Z, Zheng WJ, Allen GI, Liu Y, Ruan J, Zhao Z. The International Conference on Intelligent Biology and Medicine (ICIBM) 2016: from big data to big analytical tools. Bmc Bioinformatics. 18: 405. PMID 28984189 DOI: 10.1186/s12859-017-1797-3  0.01
2017 Inouye D, Yang E, Allen G, Ravikumar P. A Review of Multivariate Distributions for Count Data Derived from the Poisson Distribution. Wiley Interdisciplinary Reviews. Computational Statistics. 9. PMID 28983398 DOI: 10.1002/wics.1398  0.01
2015 Yang E, Ravikumar P, Allen GI, Liu Z. Graphical Models via Univariate Exponential Family Distributions. Journal of Machine Learning Research : Jmlr. 16: 3813-3847. PMID 27570498  0.01
2013 Allen GI, Liu Z. A Local Poisson Graphical Model for inferring networks from sequencing data. Ieee Transactions On Nanobioscience. 12: 189-98. PMID 23955777 DOI: 10.1109/TNB.2013.2263838  0.01
2011 Allen GI, Maletić-Savatić M. Sparse non-negative generalized PCA with applications to metabolomics. Bioinformatics (Oxford, England). 27: 3029-35. PMID 21930672 DOI: 10.1093/bioinformatics/btr522  0.01
2010 Allen GI, Tibshirani R. TRANSPOSABLE REGULARIZED COVARIANCE MODELS WITH AN APPLICATION TO MISSING DATA IMPUTATION. The Annals of Applied Statistics. 4: 764-790. PMID 26877823 DOI: 10.1214/09-AOAS314  0.01
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