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Yujun Han - Publications

Affiliations: 
2005-2010 Plant Biology University of Georgia, Athens, Athens, GA, United States 
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34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Oz-Levi D, Olender T, Bar-Joseph I, Zhu Y, Marek-Yagel D, Barozzi I, Osterwalder M, Alkelai A, Ruzzo EK, Han Y, Vos ESM, Reznik-Wolf H, Hartman C, Shamir R, Weiss B, et al. Noncoding deletions reveal a gene that is critical for intestinal function. Nature. PMID 31217582 DOI: 10.1038/S41586-019-1312-2  0.459
2019 Liu X, Bi B, Xu X, Li B, Tian S, Wang J, Zhang H, Wang G, Han Y, McElroy JS. Rapid identification of a candidate nicosulfuron sensitivity gene (Nss) in maize (Zea mays L.) via combining bulked segregant analysis and RNA-seq. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 30652203 DOI: 10.1007/s00122-019-03282-8  0.342
2017 Appenzeller S, Balling R, Barisic N, Baulac S, Caglayan H, Craiu D, Jonghe PD, Depienne C, Dimova P, Djémié T, Gormley P, Guerrini R, Helbig I, Hjalgrim H, Hoffman-Zacharska D, ... ... Han Y, et al. Erratum: De Novo Mutations in Synaptic Transmission Genes Including DNM1 Cause Epileptic Encephalopathies (American Journal of Human Genetics (2014) 95(4) (360–370)(S0002929714003838)(10.1016/j.ajhg.2014.08.013)) American Journal of Human Genetics. 100: 179. PMID 28061363 DOI: 10.1016/J.Ajhg.2016.12.012  0.379
2015 Petrovski S, Gussow AB, Wang Q, Halvorsen M, Han Y, Weir WH, Allen AS, Goldstein DB. The Intolerance of Regulatory Sequence to Genetic Variation Predicts Gene Dosage Sensitivity. Plos Genetics. 11: e1005492. PMID 26332131 DOI: 10.1371/Journal.Pgen.1005492  0.597
2015 Jiang Y, Han Y, Petrovski S, Owzar K, Goldstein DB, Allen AS. Incorporating Functional Information in Tests of Excess De Novo Mutational Load. American Journal of Human Genetics. PMID 26235986 DOI: 10.1016/J.Ajhg.2015.06.013  0.321
2015 Cirulli ET, Lasseigne BN, Petrovski S, Sapp PC, Dion PA, Leblond CS, Couthouis J, Lu YF, Wang Q, Krueger BJ, Ren Z, Keebler J, Han Y, Levy SE, Boone BE, et al. Exome sequencing in amyotrophic lateral sclerosis identifies risk genes and pathways. Science (New York, N.Y.). 347: 1436-41. PMID 25700176 DOI: 10.1126/Science.Aaa3650  0.376
2015 Zhu X, Petrovski S, Xie P, Ruzzo EK, Lu YF, McSweeney KM, Ben-Zeev B, Nissenkorn A, Anikster Y, Oz-Levi D, Dhindsa RS, Hitomi Y, Schoch K, Spillmann RC, Heimer G, ... ... Han Y, et al. Whole-exome sequencing in undiagnosed genetic diseases: interpreting 119 trios. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 25590979 DOI: 10.1038/Gim.2014.191  0.513
2015 Wei Q, Zhan X, Zhong X, Liu Y, Han Y, Chen W, Li B. A Bayesian framework for de novo mutation calling in parents-offspring trios. Bioinformatics (Oxford, England). 31: 1375-81. PMID 25535243 DOI: 10.1093/Bioinformatics/Btu839  0.422
2015 Liu Q, Cirulli ET, Han Y, Yao S, Liu S, Zhu Q. Systematic assessment of imputation performance using the 1000 Genomes reference panels. Briefings in Bioinformatics. 16: 549-62. PMID 25246238 DOI: 10.1093/Bib/Bbu035  0.502
2014 Jiang Y, Satten GA, Han Y, Epstein MP, Heinzen EL, Goldstein DB, Allen AS. Utilizing population controls in rare-variant case-parent association tests. American Journal of Human Genetics. 94: 845-53. PMID 24836453 DOI: 10.1016/J.Ajhg.2014.04.014  0.301
2013 Allen AS, Berkovic SF, Cossette P, Delanty N, Dlugos D, Eichler EE, Epstein MP, Glauser T, Goldstein DB, Han Y, Heinzen EL, Hitomi Y, Howell KB, et al. De novo mutations in epileptic encephalopathies. Nature. 501: 217-21. PMID 23934111 DOI: 10.1038/Nature12439  0.34
2013 DeStefano GM, Fantauzzo KA, Petukhova L, Kurban M, Tadin-Strapps M, Levy B, Warburton D, Cirulli ET, Han Y, Sun X, Shen Y, Shirazi M, Jobanputra V, Cepeda-Valdes R, Cesar Salas-Alanis J, et al. Position effect on FGF13 associated with X-linked congenital generalized hypertrichosis. Proceedings of the National Academy of Sciences of the United States of America. 110: 7790-5. PMID 23603273 DOI: 10.1073/Pnas.1216412110  0.393
2013 Han Y, Qin S, Wessler SR. Comparison of class 2 transposable elements at superfamily resolution reveals conserved and distinct features in cereal grass genomes. Bmc Genomics. 14: 71. PMID 23369001 DOI: 10.1186/1471-2164-14-71  0.665
2012 Zhu M, Need AC, Han Y, Ge D, Maia JM, Zhu Q, Heinzen EL, Cirulli ET, Pelak K, He M, Ruzzo EK, Gumbs C, Singh A, Feng S, Shianna KV, et al. Using ERDS to infer copy-number variants in high-coverage genomes. American Journal of Human Genetics. 91: 408-21. PMID 22939633 DOI: 10.1016/J.Ajhg.2012.07.004  0.545
2010 Han Y, Wessler SR. MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences. Nucleic Acids Research. 38: e199. PMID 20880995 DOI: 10.1093/Nar/Gkq862  0.673
2009 Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, ... ... Han Y, et al. The B73 maize genome: complexity, diversity, and dynamics. Science (New York, N.Y.). 326: 1112-5. PMID 19965430 DOI: 10.1126/Science.1178534  0.704
2009 Wei F, Stein JC, Liang C, Zhang J, Fulton RS, Baucom RS, De Paoli E, Zhou S, Yang L, Han Y, Pasternak S, Narechania A, Zhang L, Yeh CT, Ying K, et al. Detailed analysis of a contiguous 22-Mb region of the maize genome. Plos Genetics. 5: e1000728. PMID 19936048 DOI: 10.1371/Journal.Pgen.1000728  0.708
2009 Han Y, Burnette JM, Wessler SR. TARGeT: a web-based pipeline for retrieving and characterizing gene and transposable element families from genomic sequences. Nucleic Acids Research. 37: e78. PMID 19429695 DOI: 10.1093/Nar/Gkp295  0.663
2005 Li R, Ye J, Li S, Wang J, Han Y, Ye C, Wang J, Yang H, Yu J, Wong GK, Wang J. ReAS: Recovery of ancestral sequences for transposable elements from the unassembled reads of a whole genome shotgun. Plos Computational Biology. 1: e43. PMID 16184192 DOI: 10.1371/Journal.Pcbi.0010043  0.598
2005 Han Y, Ni P, Lü H, Ye J, Hu J, Chen C, Huang X, Cong L, Li G, Wang J, Gu X, Yu J, Li S. Applications of the double-barreled data in whole-genome shotgun sequence assembly and analysis. Science in China. Series C, Life Sciences / Chinese Academy of Sciences. 48: 300-6. PMID 16092764 DOI: 10.1007/Bf03183625  0.476
2005 Yu J, Wang J, Lin W, Li S, Li H, Zhou J, Ni P, Dong W, Hu S, Zeng C, Zhang J, Zhang Y, Li R, Xu Z, Li S, ... ... Han Y, et al. The Genomes of Oryza sativa: a history of duplications. Plos Biology. 3: e38. PMID 15685292 DOI: 10.1371/Journal.Pbio.0030038  0.665
2004 Song Y, Tong Z, Wang J, Wang L, Guo Z, Han Y, Zhang J, Pei D, Zhou D, Qin H, Pang X, Han Y, Zhai J, Li M, Cui B, et al. Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans. Dna Research : An International Journal For Rapid Publication of Reports On Genes and Genomes. 11: 179-97. PMID 15368893 DOI: 10.1093/Dnares/11.3.179  0.492
2004 Tian AG, Wang J, Cui P, Han YJ, Xu H, Cong LJ, Huang XG, Wang XL, Jiao YZ, Wang BJ, Wang YJ, Zhang JS, Chen SY. Characterization of soybean genomic features by analysis of its expressed sequence tags Theoretical and Applied Genetics. 108: 903-913. PMID 14624337 DOI: 10.1007/S00122-003-1499-2  0.607
2003 Qin E, Zhu Q, Yu M, Fan B, Chang G, Si B, Yang B, Peng W, Jiang T, Liu B, Deng Y, Liu H, Zhang Y, Wang C, Li Y, ... ... Han Y, et al. A complete sequence and comparative analysis of a SARS-associated virus (Isolate BJ01). Chinese Science Bulletin = Kexue Tongbao. 48: 941-948. PMID 32214698 DOI: 10.1007/Bf03184203  0.556
2003 Xu J, Hu J, Wang J, Han Y, Hu Y, Wen J, Li Y, Ji J, Ye J, Zhang Z, Wei W, Li S, Wang J, Wang J, Yu J, et al. Genome organization of the SARS-CoV. Genomics, Proteomics & Bioinformatics. 1: 226-35. PMID 15629035 DOI: 10.1016/S1672-0229(03)01028-3  0.618
2003 Hu J, Wang J, Xu J, Li W, Han Y, Li Y, Ji J, Ye J, Xu Z, Zhang Z, Wei W, Li S, Wang J, Wang J, Yu J, et al. Evolution and variation of the SARS-CoV genome. Genomics, Proteomics & Bioinformatics. 1: 216-25. PMID 15629034 DOI: 10.1016/S1672-0229(03)01027-1  0.584
2003 Bi S, Qin E, Xu Z, Li W, Wang J, Hu Y, Liu Y, Duan S, Hu J, Han Y, Xu J, Li Y, Yi Y, Zhou Y, Lin W, et al. Complete genome sequences of the SARS-CoV: the BJ Group (Isolates BJ01-BJ04). Genomics, Proteomics & Bioinformatics. 1: 180-92. PMID 15629030 DOI: 10.1016/S1672-0229(03)01023-4  0.446
2003 Xu Z, Zhang H, Tian X, Ji J, Li W, Li Y, Tian W, Han Y, Wang L, Zhang Z, Xu J, Wei W, Zhu J, Sun H, Zhang X, et al. The R protein of SARS-CoV: analyses of structure and function based on four complete genome sequences of isolates BJ01-BJ04. Genomics, Proteomics & Bioinformatics. 1: 155-65. PMID 15626345 DOI: 10.1016/S1672-0229(03)01019-2  0.406
2003 Hu Y, Wen J, Tang L, Zhang H, Zhang X, Li Y, Wang J, Han Y, Li G, Shi J, Tian X, Jiang F, Zhao X, Wang J, Liu S, et al. The M protein of SARS-CoV: basic structural and immunological properties. Genomics, Proteomics & Bioinformatics. 1: 118-30. PMID 15626342 DOI: 10.1016/S1672-0229(03)01016-7  0.31
2003 Li J, Luo C, Deng Y, Han Y, Tang L, Wang J, Ji J, Ye J, Jiang F, Xu Z, Tong W, Wei W, Zhang Q, Li S, Li W, et al. The structural characterization and antigenicity of the S protein of SARS-CoV. Genomics, Proteomics & Bioinformatics. 1: 108-17. PMID 15626341 DOI: 10.1016/S1672-0229(03)01015-5  0.418
2003 Qin E, He X, Tian W, Liu Y, Li W, Wen J, Wang J, Fan B, Wu Q, Chang G, Cao W, Xu Z, Yang R, Wang J, Yu M, ... ... Han Y, et al. A genome sequence of novel SARS-CoV isolates: the genotype, GD-Ins29, leads to a hypothesis of viral transmission in South China. Genomics, Proteomics & Bioinformatics. 1: 101-7. PMID 15626340 DOI: 10.1016/S1672-0229(03)01014-3  0.503
2003 Zhong L, Zhang K, Huang X, Ni P, Han Y, Wang K, Wang J, Li S. A statistical approach designed for finding mathematically defined repeats in shotgun data and determining the length distribution of clone-inserts. Genomics, Proteomics & Bioinformatics. 1: 43-51. PMID 15626332 DOI: 10.1016/S1672-0229(03)01006-4  0.494
2002 Wang J, Wong GK, Ni P, Han Y, Huang X, Zhang J, Ye C, Zhang Y, Hu J, Zhang K, Xu X, Cong L, Lu H, Ren X, Ren X, et al. RePS: a sequence assembler that masks exact repeats identified from the shotgun data. Genome Research. 12: 824-31. PMID 11997349 DOI: 10.1101/Gr.165102  0.394
2002 Yu J, Hu S, Wang J, Wong GK, Li S, Liu B, Deng Y, Dai L, Zhou Y, Zhang X, Cao M, Liu J, Sun J, Tang J, Chen Y, ... ... Han Y, et al. A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science (New York, N.Y.). 296: 79-92. PMID 11935017 DOI: 10.1126/Science.1068037  0.641
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