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Ken Naito - Publications

Affiliations: 
2007-2010 Plant Biology University of Georgia, Athens, Athens, GA, United States 
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37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Takahashi Y, Sakai H, Ariga H, Teramoto S, Shimada TL, Eun H, Muto C, Naito K, Tomooka N. Domesticating : Chromosome-Level genome assembly reveals as a candidate gene decreasing hard-seededness. Frontiers in Plant Science. 14: 1119625. PMID 37139108 DOI: 10.3389/fpls.2023.1119625  0.376
2023 Naito K. How to Sequence and Assemble Plant Genomes. Methods in Molecular Biology (Clifton, N.J.). 2632: 57-77. PMID 36781721 DOI: 10.1007/978-1-0716-2996-3_5  0.338
2020 Takahashi Y, Kongjaimun A, Muto C, Kobayashi Y, Kumagai M, Sakai H, Satou K, Teruya K, Shiroma A, Shimoji M, Hirano T, Isemura T, Saito H, Baba-Kasai A, Kaga A, ... ... Naito K, et al. Same Locus for Non-shattering Seed Pod in Two Independently Domesticated Legumes, and . Frontiers in Genetics. 11: 748. PMID 32793284 DOI: 10.3389/Fgene.2020.00748  0.452
2020 van Zonneveld M, Rakha M, Tan SY, Chou YY, Chang CH, Yen JY, Schafleitner R, Nair R, Naito K, Solberg SØ. Mapping patterns of abiotic and biotic stress resilience uncovers conservation gaps and breeding potential of Vigna wild relatives. Scientific Reports. 10: 2111. PMID 32034221 DOI: 10.1038/S41598-020-58646-8  0.355
2020 Ogiso-Tanaka E, Chankaew S, Isemura T, Kongjaimun A, Baba A, Naito K, Kaga A, Tomooka N. Whole genome sequencing data of var. Ukushima and G418. Data in Brief. 29: 105131. PMID 32021887 DOI: 10.1016/J.Dib.2020.105131  0.496
2020 Mortuza MF, Tomooka N, Habibi S, Akatsu T, Djedidi S, Naito K, Sekimoto H, Okazaki S, Ohkama-Ohtsu N, Yokoyama T. Multiphase characterization of wild Vigna associated root nodule bacteria from Japanese subtropical islands unveiled novel high temperature resistant Bradyrhizobium strains having high symbiotic compatibility with soybean and mungbean Soil Science and Plant Nutrition. 66: 285-298. DOI: 10.1080/00380768.2020.1738192  0.356
2019 Takahashi Y, Sakai H, Yoshitsu Y, Muto C, Anai T, Pandiyan M, Senthil N, Tomooka N, Naito K. Domesticating : A Potential Legume Crop With Broad Resistance to Biotic Stresses. Frontiers in Plant Science. 10: 1607. PMID 31867036 DOI: 10.3389/Fpls.2019.01607  0.379
2019 Isogai A, Tsutsumi N, Asami T, Seki M, Saijo Y, Naito K, Minamisawa K. How will plant science contribute to improve productivity in agriculture?—Future prospects of plant science— Breeding Research. 21: 49-54. DOI: 10.1270/Jsbbr.21.W01  0.312
2019 Dachapak S, Somta P, Naito K, Tomooka N, Kaga A, Srinives P. Detection of quantitative trait loci for salt tolerance in zombi pea [Vigna vexillata (L.) A. Rich] Euphytica. 215. DOI: 10.1007/S10681-019-2530-2  0.448
2018 Dachapak S, Tomooka N, Somta P, Naito K, Kaga A, Srinives P. QTL analysis of domestication syndrome in zombi pea (Vigna vexillata), an underutilized legume crop. Plos One. 13: e0200116. PMID 30562342 DOI: 10.1371/Journal.Pone.0200116  0.396
2018 Iseki K, Takahashi Y, Muto C, Naito K, Tomooka N. Diversity of Drought Tolerance in the Genus . Frontiers in Plant Science. 9: 729. PMID 29963062 DOI: 10.3389/Fpls.2018.00729  0.368
2018 Masuta Y, Kawabe A, Nozawa K, Naito K, Kato A, Ito H. Characterization of a heat-activated retrotransposon in . Breeding Science. 68: 168-176. PMID 29875600 DOI: 10.1270/Jsbbs.17085  0.386
2018 Kanazashi Y, Hirose A, Takahashi I, Mikami M, Endo M, Hirose S, Toki S, Kaga A, Naito K, Ishimoto M, Abe J, Yamada T. Simultaneous site-directed mutagenesis of duplicated loci in soybean using a single guide RNA. Plant Cell Reports. PMID 29333573 DOI: 10.1007/S00299-018-2251-3  0.328
2017 Naito K, Takahashi Y, Chaitieng B, Hirano K, Kaga A, Takagi K, Ogiso-Tanaka E, Thavarasook C, Ishimoto M, Tomooka N. Multiple organ gigantism caused by mutation in VmPPD gene in blackgram (Vigna mungo). Breeding Science. 67: 151-158. PMID 28588392 DOI: 10.1270/Jsbbs.16184  0.398
2017 Takahashi Y, Muto C, Iseki K, Naito K, Somta P, Pandiyan M, Senthil N, Tomooka N. A new taxonomic treatment for some wild relatives of mungbean (Vigna radiata (L.) Wilcz.) based on their molecular phylogenetic relationships and morphological variations Genetic Resources and Crop Evolution. 65: 1109-1121. DOI: 10.1007/S10722-017-0599-9  0.356
2016 Iseki K, Takahashi Y, Muto C, Naito K, Tomooka N. Diversity and Evolution of Salt Tolerance in the Genus Vigna. Plos One. 11: e0164711. PMID 27736995 DOI: 10.1371/Journal.Pone.0164711  0.391
2016 Takahashi Y, Somta P, Muto C, Iseki K, Naito K, Pandiyan M, Natesan S, Tomooka N. Novel Genetic Resources in the Genus Vigna Unveiled from Gene Bank Accessions. Plos One. 11: e0147568. PMID 26800459 DOI: 10.1371/Journal.Pone.0147568  0.415
2016 Yoshida Y, Marubodee R, Ogiso-Tanaka E, Iseki K, Isemura T, Takahashi Y, Muto C, Naito K, Kaga A, Okuno K, Ehara H, Tomooka N. Salt tolerance in wild relatives of adzuki bean, Vigna angularis (Willd.) Ohwi et Ohashi Genetic Resources and Crop Evolution. 63: 627-637. DOI: 10.1007/S10722-015-0272-0  0.344
2015 Takahashi Y, Iseki K, Kitazawa K, Muto C, Somta P, Irie K, Naito K, Tomooka N. A Homoploid Hybrid Between Wild Vigna Species Found in a Limestone Karst. Frontiers in Plant Science. 6: 1050. PMID 26648953 DOI: 10.3389/Fpls.2015.01050  0.329
2015 Sakai H, Naito K, Takahashi Y, Sato T, Yamamoto T, Muto I, Itoh T, Tomooka N. The Vigna Genome Server, 'VigGS': a genomic knowledge base of the genus Vigna based on high quality, annotated genome sequence of the azuki bean, Vigna angularis (Willd.) Ohwi & Ohashi. Plant & Cell Physiology. PMID 26644460 DOI: 10.1093/Pcp/Pcv189  0.49
2015 Sakai H, Naito K, Ogiso-Tanaka E, Takahashi Y, Iseki K, Muto C, Satou K, Teruya K, Shiroma A, Shimoji M, Hirano T, Itoh T, Kaga A, Tomooka N. The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome. Scientific Reports. 5: 16780. PMID 26616024 DOI: 10.1038/Srep16780  0.42
2015 Marubodee R, Ogiso-Tanaka E, Isemura T, Chankaew S, Kaga A, Naito K, Ehara H, Tomooka N. Construction of an SSR and RAD-Marker Based Molecular Linkage Map of Vigna vexillata (L.) A. Rich. Plos One. 10: e0138942. PMID 26398819 DOI: 10.1371/Journal.Pone.0138942  0.346
2015 Wang L, Kikuchi S, Muto C, Naito K, Isemura T, Ishimoto M, Cheng X, Kaga A, Tomooka N. Reciprocal translocation identified in Vigna angularis dominates the wild population in East Japan. Journal of Plant Research. 128: 653-63. PMID 25796202 DOI: 10.1007/S10265-015-0720-0  0.363
2014 Naito K, Monden Y, Yasuda K, Saito H, Okumoto Y. mPing: The bursting transposon. Breeding Science. 64: 109-14. PMID 25053919 DOI: 10.1270/Jsbbs.64.109  0.485
2014 Chankaew S, Isemura T, Naito K, Ogiso-Tanaka E, Tomooka N, Somta P, Kaga A, Vaughan DA, Srinives P. QTL mapping for salt tolerance and domestication-related traits in Vigna marina subsp. oblonga, a halophytic species. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 127: 691-702. PMID 24370961 DOI: 10.1007/S00122-013-2251-1  0.381
2014 Tomooka N, Naito K, Kaga A, Sakai H, Isemura T, Ogiso-Tanaka E, Iseki K, Takahashi Y. Evolution, domestication and neo-domestication of the genus Vigna Plant Genetic Resources. 12: 168-171. DOI: 10.1017/S1479262114000483  0.381
2013 Yasuda K, Ito M, Sugita T, Tsukiyama T, Saito H, Naito K, Teraishi M, Tanisaka T, Okumoto Y. Utilization of transposable element mPing as a novel genetic tool for modification of the stress response in rice. Molecular Breeding : New Strategies in Plant Improvement. 32: 505-516. PMID 24078785 DOI: 10.1007/S11032-013-9885-1  0.437
2013 Naito K, Kaga A, Tomooka N, Kawase M. De novo assembly of the complete organelle genome sequences of azuki bean (Vigna angularis) using next-generation sequencers. Breeding Science. 63: 176-82. PMID 23853512 DOI: 10.1270/Jsbbs.63.176  0.444
2013 McCouch S, Baute GJ, Bradeen J, Bramel P, Bretting PK, Buckler E, Burke JM, Charest D, Cloutier S, Cole G, Dempewolf H, Dingkuhn M, Feuillet C, Gepts P, Grattapaglia D, ... ... Naito K, et al. Agriculture: Feeding the future. Nature. 499: 23-4. PMID 23823779 DOI: 10.1038/499023A  0.342
2013 Sato K, Mukainari Y, Naito K, Fukunaga K. Construction of a foxtail millet linkage map and mapping of spikelet-tipped bristles 1(stb1) by using transposon display markers and simple sequence repeat markers with genome sequence information Molecular Breeding. 31: 675-684. DOI: 10.1007/S11032-012-9825-5  0.467
2011 Hirano R, Naito K, Fukunaga K, Watanabe KN, Ohsawa R, Kawase M. Genetic structure of landraces in foxtail millet (Setaria italica (L.) P. Beauv.) revealed with transposon display and interpretation to crop evolution of foxtail millet. Genome. 54: 498-506. PMID 21623678 DOI: 10.1139/G11-015  0.362
2009 Naito K, Zhang F, Tsukiyama T, Saito H, Hancock CN, Richardson AO, Okumoto Y, Tanisaka T, Wessler SR. Unexpected consequences of a sudden and massive transposon amplification on rice gene expression. Nature. 461: 1130-4. PMID 19847266 DOI: 10.1038/Nature08479  0.665
2009 Monden Y, Naito K, Okumoto Y, Saito H, Oki N, Tsukiyama T, Ideta O, Nakazaki T, Wessler SR, Tanisaka T. High potential of a transposon mPing as a marker system in japonica x japonica cross in rice. Dna Research : An International Journal For Rapid Publication of Reports On Genes and Genomes. 16: 131-40. PMID 19270311 DOI: 10.1093/Dnares/Dsp004  0.603
2009 Karki S, Tsukiyama T, Okumoto Y, Rizal G, Naito K, Teraishi M, Nakazaki T, Tanisaka T. Analysis of distribution and proliferation of mPing family transposons in a wild rice (Oryza rufipogon Griff.) Breeding Science. 59: 297-307. DOI: 10.1270/Jsbbs.59.297  0.341
2006 Naito K, Cho E, Yang G, Campbell MA, Yano K, Okumoto Y, Tanisaka T, Wessler SR. Dramatic amplification of a rice transposable element during recent domestication. Proceedings of the National Academy of Sciences of the United States of America. 103: 17620-5. PMID 17101970 DOI: 10.1073/Pnas.0605421103  0.671
2006 Nakazaki T, Tsukiyama T, Okumoto Y, Kageyama D, Naito K, Inouye K, Tanisaka T. Distribution, structure, organ-specific expression, and phylogenic analysis of the pathogenesis-related protein-3 chitinase gene family in rice (Oryza sativa L.) Genome. 49: 619-630. PMID 16936841 DOI: 10.1139/G06-020  0.486
2005 Naito K, Kusaba M, Shikazono N, Takano T, Tanaka A, Tanisaka T, Nishimura M. Transmissible and nontransmissible mutations induced by irradiating Arabidopsis thaliana pollen with gamma-rays and carbon ions. Genetics. 169: 881-9. PMID 15371348 DOI: 10.1534/Genetics.104.033654  0.31
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