| Year |
Citation |
Score |
| 2024 |
Fernández-García L, Gao X, Kirigo J, Song S, Battisti ME, Garcia-Contreras R, Tomas M, Guo Y, Wang X, Wood TK. Single-cell analysis reveals that cryptic prophage protease LfgB protects during oxidative stress by cleaving antitoxin MqsA. Microbiology Spectrum. e0347123. PMID 38206055 DOI: 10.1128/spectrum.03471-23 |
0.695 |
|
| 2023 |
Fernández-García L, Song S, Kirigo J, Battisti ME, Petersen ME, Tomás M, Wood TK. Toxin/antitoxin systems induce persistence and work in concert with restriction/modification systems to inhibit phage. Microbiology Spectrum. e0338823. PMID 38054715 DOI: 10.1128/spectrum.03388-23 |
0.69 |
|
| 2022 |
Song S, Semenova E, Severinov K, Fernández-García L, Benedik MJ, Maeda T, Wood TK. CRISPR-Cas Controls Cryptic Prophages. International Journal of Molecular Sciences. 23. PMID 36555835 DOI: 10.3390/ijms232416195 |
0.661 |
|
| 2022 |
Song S, Wood TK. Manipulating indole symbiont signalling. Environmental Microbiology Reports. PMID 35667868 DOI: 10.1111/1758-2229.13100 |
0.647 |
|
| 2021 |
Song S, Kim JS, Yamasaki R, Oh S, Benedik MJ, Wood TK. Escherichia coli cryptic prophages sense nutrients to influence persister cell resuscitation. Environmental Microbiology. PMID 34668292 DOI: 10.1111/1462-2920.15816 |
0.732 |
|
| 2021 |
Li Y, Wood TK, Zhang W, Li C. Vibrio splendidus persister cells induced by host coelomic fluids show a similar phenotype to antibiotic-induced counterparts. Environmental Microbiology. PMID 34390618 DOI: 10.1111/1462-2920.15717 |
0.302 |
|
| 2021 |
Song S, Wood TK. Waiting for Godot: response to 'How dead is dead? Viable but non-culturable versus persister cells'. Environmental Microbiology Reports. PMID 33884772 DOI: 10.1111/1758-2229.12951 |
0.669 |
|
| 2021 |
Song S, Wood TK. Mostly dead and all dead: response to 'what do we mean by viability in terms of "viable but non-culturable cells"'. Environmental Microbiology Reports. PMID 33884769 DOI: 10.1111/1758-2229.12952 |
0.66 |
|
| 2021 |
Song S, Wood TK. 'Viable But Non-Culturable Cells' are Dead. Environmental Microbiology. PMID 33723898 DOI: 10.1111/1462-2920.15463 |
0.707 |
|
| 2021 |
Song S, Wood TK. The Primary Physiological Roles of Autoinducer 2 in Are Chemotaxis and Biofilm Formation. Microorganisms. 9. PMID 33672862 DOI: 10.3390/microorganisms9020386 |
0.703 |
|
| 2020 |
Wood TK, Song S. Forming and waking dormant cells: The ppGpp ribosome dimerization persister model. Biofilm. 2: 100018. PMID 33447804 DOI: 10.1016/J.Bioflm.2019.100018 |
0.713 |
|
| 2020 |
Song S, Wood TK. A Primary Physiological Role of Toxin/Antitoxin Systems Is Phage Inhibition. Frontiers in Microbiology. 11: 1895. PMID 32903830 DOI: 10.3389/Fmicb.2020.01895 |
0.677 |
|
| 2020 |
Song S, Wood TK. Combatting Persister Cells With Substituted Indoles. Frontiers in Microbiology. 11: 1565. PMID 32733426 DOI: 10.3389/Fmicb.2020.01565 |
0.721 |
|
| 2020 |
Song S, Wood TK. Are We Really Studying Persister Cells? Environmental Microbiology Reports. PMID 32363793 DOI: 10.1111/1758-2229.12849 |
0.686 |
|
| 2020 |
Song S, Wood TK. Toxin/Antitoxin System Paradigms: Toxins Bound to Antitoxins Are Not Likely Activated by Preferential Antitoxin Degradation. Advanced Biosystems. 4: e1900290. PMID 32293143 DOI: 10.1002/adbi.201900290 |
0.716 |
|
| 2020 |
Song S, Wood TK. ppGpp ribosome dimerization model for bacterial persister formation and resuscitation. Biochemical and Biophysical Research Communications. PMID 32007277 DOI: 10.1016/J.Bbrc.2020.01.102 |
0.725 |
|
| 2019 |
Yamasaki R, Song S, Benedik MJ, Wood TK. Persister Cells Resuscitate Using Membrane Sensors that Activate Chemotaxis, Lower cAMP Levels, and Revive Ribosomes. Iscience. 23: 100792. PMID 31926430 DOI: 10.1016/J.Isci.2019.100792 |
0.715 |
|
| 2019 |
Song S, Wood TK. Persister Cells Resuscitate via Ribosome Modification by 23S rRNA Pseudouridine Synthase RluD. Environmental Microbiology. PMID 31608580 DOI: 10.1111/1462-2920.14828 |
0.727 |
|
| 2019 |
Zhang W, Yamasaki R, Song S, Wood TK. Interkingdom Signal Indole Inhibits Pseudomonas aeruginosa Persister Cell Waking. Journal of Applied Microbiology. PMID 31487414 DOI: 10.1111/Jam.14434 |
0.722 |
|
| 2019 |
Wood TK, Lee J. Precedence for the Role of Indole with Pathogens. Mbio. 10. PMID 31363035 DOI: 10.1128/Mbio.01599-19 |
0.532 |
|
| 2019 |
Song S, Gong T, Yamasaki R, Kim JS, Wood TK. Identification of a Potent Indigoid Persister Antimicrobial by Screening Dormant Cells. Biotechnology and Bioengineering. PMID 31161664 DOI: 10.1002/Bit.27078 |
0.726 |
|
| 2019 |
Zhu L, Gong T, Wood TL, Yamasaki R, Wood TK. σ -Dependent Regulator DVU2956 Switches Desulfovibrio vulgaris from Biofilm Formation to Planktonic Growth and Regulates Hydrogen Sulfide Production. Environmental Microbiology. PMID 31087603 DOI: 10.1111/1462-2920.14679 |
0.324 |
|
| 2019 |
Song S, Guo Y, Kim JS, Wang X, Wood TK. Phages Mediate Bacterial Self-Recognition. Cell Reports. 27: 737-749.e4. PMID 30995473 DOI: 10.1016/J.Celrep.2019.03.070 |
0.68 |
|
| 2019 |
Wood TK, Song S, Yamasaki R. Ribosome dependence of persister cell formation and resuscitation. Journal of Microbiology (Seoul, Korea). 57: 213-219. PMID 30806978 DOI: 10.1007/S12275-019-8629-2 |
0.73 |
|
| 2018 |
Wood TL, Gong T, Zhu L, Miller J, Miller DS, Yin B, Wood TK. Rhamnolipids from disperse the biofilms of sulfate-reducing bacteria. Npj Biofilms and Microbiomes. 4: 22. PMID 30302271 DOI: 10.1038/s41522-018-0066-1 |
0.305 |
|
| 2018 |
Song S, Wood TK. Post-segregational Killing and Phage Inhibition Are Not Mediated by Cell Death Through Toxin/Antitoxin Systems. Frontiers in Microbiology. 9: 814. PMID 29922242 DOI: 10.3389/Fmicb.2018.00814 |
0.7 |
|
| 2018 |
Pu M, Sheng L, Song S, Gong T, Wood TK. Serine Hydroxymethyltransferase ShrA (PA2444) Controls Rugose Small-Colony Variant Formation in. Frontiers in Microbiology. 9: 315. PMID 29535691 DOI: 10.3389/Fmicb.2018.00315 |
0.703 |
|
| 2018 |
Kim JS, Yamasaki R, Song S, Zhang W, Wood TK. Single Cell Observations Show Persister Cells Wake Based on Ribosome Content. Environmental Microbiology. PMID 29528544 DOI: 10.1111/1462-2920.14093 |
0.709 |
|
| 2018 |
Kim JS, Schantz AB, Song S, Kumar M, Wood TK. GhoT of the GhoT/GhoS toxin/antitoxin system damages lipid membranes by forming transient pores. Biochemical and Biophysical Research Communications. PMID 29470981 DOI: 10.1016/J.Bbrc.2018.01.067 |
0.652 |
|
| 2018 |
Lee Y, Song S, Sheng L, Zhu L, Kim JS, Wood TK. Substrate Binding Protein DppA1 of ABC Transporter DppBCDF Increases Biofilm Formation in Pseudomonas aeruginosa by Inhibiting Pf5 Prophage Lysis. Frontiers in Microbiology. 9: 30. PMID 29416528 DOI: 10.3389/Fmicb.2018.00030 |
0.746 |
|
| 2018 |
Zhu L, Poosarla VG, Song S, Wood TL, Miller DS, Yin B, Wood TK. Glycoside Hydrolase DisH from Desulfovibrio vulgaris Degrades the N-Acetylgalactosamine Component of Diverse Biofilms. Environmental Microbiology. PMID 29411481 DOI: 10.1111/1462-2920.14064 |
0.711 |
|
| 2017 |
Wood TK. Strategies for combating persister cell and biofilm infections. Microbial Biotechnology. PMID 28696066 DOI: 10.1111/1751-7915.12774 |
0.348 |
|
| 2017 |
Castillo-Juarez I, López-Jácome LE, Soberón-Chávez G, Tomás M, Lee J, Castañeda-Tamez P, Hernández-Bárragan IÁ, Cruz-Muñiz MY, Maeda T, Wood TK, García-Contreras R. Exploiting Quorum Sensing Inhibition for the Control of Pseudomonas Aeruginosa and Acinetobacter Baumannii Biofilms. Current Topics in Medicinal Chemistry. PMID 28056745 DOI: 10.2174/1568026617666170105144104 |
0.573 |
|
| 2016 |
Lee JH, Kim YG, Gwon G, Wood TK, Lee J. Halogenated indoles eradicate bacterial persister cells and biofilms. Amb Express. 6: 123. PMID 27921270 DOI: 10.1186/S13568-016-0297-6 |
0.592 |
|
| 2016 |
Fernández-García L, Blasco L, Lopez M, Bou G, García-Contreras R, Wood T, Tomas M. Toxin-Antitoxin Systems in Clinical Pathogens. Toxins. 8. PMID 27447671 DOI: 10.3390/Toxins8070227 |
0.373 |
|
| 2016 |
Chowdhury N, Kwan BW, Wood TK. Persistence Increases in the Absence of the Alarmone Guanosine Tetraphosphate by Reducing Cell Growth. Scientific Reports. 6: 20519. PMID 26837570 DOI: 10.1038/srep20519 |
0.349 |
|
| 2016 |
Lee JH, Kim YG, Lee K, Kim CJ, Park DJ, Ju Y, Lee JC, Wood TK, Lee J. Streptomyces-derived actinomycin D inhibits biofilm formation by Staphylococcus aureus and its hemolytic activity. Biofouling. 32: 45-56. PMID 26785934 DOI: 10.1080/08927014.2015.1125888 |
0.547 |
|
| 2015 |
Liu X, Li Y, Guo Y, Zeng Z, Li B, Wood TK, Cai X, Wang X. Physiological Function of Rac Prophage During Biofilm Formation and Regulation of Rac Excision in Escherichia coli K-12. Scientific Reports. 5: 16074. PMID 26530864 DOI: 10.1038/srep16074 |
0.324 |
|
| 2015 |
Lee JH, Wood TK, Lee J. Roles of Indole as an Interspecies and Interkingdom Signaling Molecule. Trends in Microbiology. PMID 26439294 DOI: 10.1016/J.Tim.2015.08.001 |
0.524 |
|
| 2015 |
Wood TK. Combatting bacterial persister cells. Biotechnology and Bioengineering. PMID 26264116 DOI: 10.1002/bit.25721 |
0.35 |
|
| 2015 |
Kwan BW, Chowdhury N, Wood TK. Combatting bacterial infections by killing persister cells with mitomycin C. Environmental Microbiology. PMID 25858802 DOI: 10.1111/1462-2920.12873 |
0.307 |
|
| 2015 |
Hu Y, Kwan BW, Osbourne DO, Benedik MJ, Wood TK. Toxin YafQ increases persister cell formation by reducing indole signalling. Environmental Microbiology. 17: 1275-85. PMID 25041421 DOI: 10.1111/1462-2920.12567 |
0.346 |
|
| 2014 |
Kwan BW, Lord DM, Peti W, Page R, Benedik MJ, Wood TK. The MqsR/MqsA toxin/antitoxin system protects Escherichia coli during bile acid stress. Environmental Microbiology. PMID 25534751 DOI: 10.1111/1462-2920.12749 |
0.344 |
|
| 2014 |
Hidalgo-Romano B, Gollihar J, Brown SA, Whiteley M, Valenzuela E, Kaplan HB, Wood TK, McLean RJ. Indole inhibition of N-acylated homoserine lactone-mediated quorum signalling is widespread in Gram-negative bacteria. Microbiology (Reading, England). 160: 2464-73. PMID 25165125 DOI: 10.1099/Mic.0.081729-0 |
0.302 |
|
| 2013 |
Wood TK, Knabel SJ, Kwan BW. Bacterial persister cell formation and dormancy. Applied and Environmental Microbiology. 79: 7116-21. PMID 24038684 DOI: 10.1128/Aem.02636-13 |
0.304 |
|
| 2013 |
Xu Z, Fang X, Wood TK, Huang ZJ. A systems-level approach for investigating Pseudomonas aeruginosa biofilm formation. Plos One. 8: e57050. PMID 23451140 DOI: 10.1371/journal.pone.0057050 |
0.323 |
|
| 2013 |
Kwan BW, Valenta JA, Benedik MJ, Wood TK. Arrested protein synthesis increases persister-like cell formation. Antimicrobial Agents and Chemotherapy. 57: 1468-73. PMID 23295927 DOI: 10.1128/AAC.02135-12 |
0.367 |
|
| 2013 |
Wang X, Lord DM, Hong SH, Peti W, Benedik MJ, Page R, Wood TK. Type II toxin/antitoxin MqsR/MqsA controls type V toxin/antitoxin GhoT/GhoS. Environmental Microbiology. 15: 1734-44. PMID 23289863 DOI: 10.1111/1462-2920.12063 |
0.697 |
|
| 2012 |
Bansal T, Kim DN, Slininger T, Wood TK, Jayaraman A. Human intestinal epithelial cell-derived molecule(s) increase enterohemorrhagic Escherichia coli virulence. Fems Immunology and Medical Microbiology. 66: 399-410. PMID 23163871 DOI: 10.1111/1574-695X.12004 |
0.717 |
|
| 2012 |
Wang X, Lord DM, Cheng HY, Osbourne DO, Hong SH, Sanchez-Torres V, Quiroga C, Zheng K, Herrmann T, Peti W, Benedik MJ, Page R, Wood TK. A new type V toxin-antitoxin system where mRNA for toxin GhoT is cleaved by antitoxin GhoS. Nature Chemical Biology. 8: 855-61. PMID 22941047 DOI: 10.1038/Nchembio.1062 |
0.7 |
|
| 2012 |
Sheng L, Pu M, Hegde M, Zhang Y, Jayaraman A, Wood TK. Interkingdom adenosine signal reduces Pseudomonas aeruginosa pathogenicity. Microbial Biotechnology. 5: 560-72. PMID 22414222 DOI: 10.1111/J.1751-7915.2012.00338.X |
0.749 |
|
| 2012 |
Kim J, Hegde M, Kim SH, Wood TK, Jayaraman A. A microfluidic device for high throughput bacterial biofilm studies. Lab On a Chip. 12: 1157-63. PMID 22318368 DOI: 10.1039/C2Lc20800H |
0.753 |
|
| 2012 |
Hong SH, Wang X, O'Connor HF, Benedik MJ, Wood TK. Bacterial persistence increases as environmental fitness decreases. Microbial Biotechnology. 5: 509-22. PMID 22221537 DOI: 10.1111/j.1751-7915.2011.00327.x |
0.727 |
|
| 2012 |
Hong SH, Hegde M, Kim J, Wang X, Jayaraman A, Wood TK. Synthetic quorum-sensing circuit to control consortial biofilm formation and dispersal in a microfluidic device. Nature Communications. 3: 613. PMID 22215088 DOI: 10.1038/Ncomms1616 |
0.805 |
|
| 2012 |
Wood TK, Peretti SW. Construction of a specialized-ribosome vector or cloned-gene expression in E. coli. Biotechnology and Bioengineering. 38: 891-906. PMID 18600846 DOI: 10.1002/Bit.260380811 |
0.677 |
|
| 2011 |
Ma Q, Zhang G, Wood TK. Escherichia coli BdcA controls biofilm dispersal in Pseudomonas aeruginosa and Rhizobium meliloti. Bmc Research Notes. 4: 447. PMID 22029875 DOI: 10.1186/1756-0500-4-447 |
0.329 |
|
| 2011 |
Wang X, Kim Y, Hong SH, Ma Q, Brown BL, Pu M, Tarone AM, Benedik MJ, Peti W, Page R, Wood TK. Antitoxin MqsA helps mediate the bacterial general stress response. Nature Chemical Biology. 7: 359-66. PMID 21516113 DOI: 10.1038/Nchembio.560 |
0.699 |
|
| 2011 |
Tsao CY, Wang L, Hashimoto Y, Yi H, March JC, DeLisa MP, Wood TK, Valdes JJ, Bentley WE. LuxS coexpression enhances yields of recombinant proteins in Escherichia coli in part through posttranscriptional control of GroEL. Applied and Environmental Microbiology. 77: 2141-52. PMID 21278275 DOI: 10.1128/Aem.02347-10 |
0.307 |
|
| 2011 |
Lee JH, Kim YG, Cho MH, Wood TK, Lee J. Transcriptomic analysis for genetic mechanisms of the factors related to biofilm formation in Escherichia coli O157:H7. Current Microbiology. 62: 1321-30. PMID 21221972 DOI: 10.1007/S00284-010-9862-4 |
0.553 |
|
| 2011 |
Han TH, Lee JH, Cho MH, Wood TK, Lee J. Environmental factors affecting indole production in Escherichia coli. Research in Microbiology. 162: 108-16. PMID 21145393 DOI: 10.1016/J.Resmic.2010.11.005 |
0.561 |
|
| 2011 |
Wood TK, Hong SH, Ma Q. Engineering biofilm formation and dispersal. Trends in Biotechnology. 29: 87-94. PMID 21131080 DOI: 10.1016/j.tibtech.2010.11.001 |
0.718 |
|
| 2011 |
Hegde M, Englert DL, Schrock S, Cohn WB, Vogt C, Wood TK, Manson MD, Jayaraman A. Chemotaxis to the quorum-sensing signal AI-2 requires the Tsr chemoreceptor and the periplasmic LsrB AI-2-binding protein. Journal of Bacteriology. 193: 768-73. PMID 21097621 DOI: 10.1128/Jb.01196-10 |
0.77 |
|
| 2011 |
Zhong Z, Fritzsche M, Pieper SB, Wood TK, Lear KL, Dandy DS, Reardon KF. Fiber optic monooxygenase biosensor for toluene concentration measurement in aqueous samples. Biosensors & Bioelectronics. 26: 2407-12. PMID 21081273 DOI: 10.1016/J.Bios.2010.10.021 |
0.501 |
|
| 2011 |
Ma Q, Yang Z, Pu M, Peti W, Wood TK. Engineering a novel c-di-GMP-binding protein for biofilm dispersal. Environmental Microbiology. 13: 631-42. PMID 21059164 DOI: 10.1111/J.1462-2920.2010.02368.X |
0.305 |
|
| 2011 |
Jones MB, Peterson SN, Benn R, Braisted JC, Jarrahi B, Shatzkes K, Ren D, Wood TK, Blaser MJ. Erratum to: Role ofluxSinBacillus anthracisgrowth and virulence factor expression Virulence. 2: 172-172. DOI: 10.4161/Viru.2.2.15095 |
0.447 |
|
| 2010 |
Wang X, Kim Y, Ma Q, Hong SH, Pokusaeva K, Sturino JM, Wood TK. Cryptic prophages help bacteria cope with adverse environments. Nature Communications. 1: 147. PMID 21266997 DOI: 10.1038/Ncomms1146 |
0.734 |
|
| 2010 |
Hong SH, Lee J, Wood TK. Engineering global regulator Hha of Escherichia coli to control biofilm dispersal. Microbial Biotechnology. 3: 717-28. PMID 21255366 DOI: 10.1111/J.1751-7915.2010.00220.X |
0.778 |
|
| 2010 |
Hong SH, Wang X, Wood TK. Controlling biofilm formation, prophage excision and cell death by rewiring global regulator H-NS of Escherichia coli. Microbial Biotechnology. 3: 344-56. PMID 21255333 DOI: 10.1111/j.1751-7915.2010.00164.x |
0.717 |
|
| 2010 |
Sanchez-Torres V, Hu H, Wood TK. GGDEF proteins YeaI, YedQ, and YfiN reduce early biofilm formation and swimming motility in Escherichia coli. Applied Microbiology and Biotechnology. 90: 651-8. PMID 21181144 DOI: 10.1007/s00253-010-3074-5 |
0.326 |
|
| 2010 |
Jones MB, Peterson SN, Benn R, Braisted JC, Jarrahi B, Shatzkes K, Ren D, Wood TK, Blaser MJ. Role of luxS in Bacillus anthracis growth and virulence factor expression. Virulence. 1: 72-83. PMID 21178420 DOI: 10.4161/Viru.1.2.10752 |
0.544 |
|
| 2010 |
Kim Y, Wang X, Zhang XS, Grigoriu S, Page R, Peti W, Wood TK. Escherichia coli toxin/antitoxin pair MqsR/MqsA regulate toxin CspD. Environmental Microbiology. 12: 1105-21. PMID 20105222 DOI: 10.1111/J.1462-2920.2009.02147.X |
0.324 |
|
| 2010 |
Bansal T, Alaniz RC, Wood TK, Jayaraman A. The bacterial signal indole increases epithelial-cell tight-junction resistance and attenuates indicators of inflammation. Proceedings of the National Academy of Sciences of the United States of America. 107: 228-33. PMID 19966295 DOI: 10.1073/Pnas.0906112107 |
0.723 |
|
| 2010 |
Lee J, Hiibel SR, Reardon KF, Wood TK. Identification of stress-related proteins in Escherichia coli using the pollutant cis-dichloroethylene Journal of Applied Microbiology. 108: 2088-2102. PMID 19919618 DOI: 10.1111/J.1365-2672.2009.04611.X |
0.785 |
|
| 2010 |
Kim Y, Wood TK. Toxins Hha and CspD and small RNA regulator Hfq are involved in persister cell formation through MqsR in Escherichia coli. Biochemical and Biophysical Research Communications. 391: 209-13. PMID 19909729 DOI: 10.1016/j.bbrc.2009.11.033 |
0.386 |
|
| 2010 |
Wood TK, Peretti SW. Effect of chemically-induced, cloned-gene expression on protein synthesis in E. Coli. Biotechnology and Bioengineering. 38: 397-412. PMID 18600776 DOI: 10.1002/Bit.260380410 |
0.687 |
|
| 2010 |
Wood TK, Peretti SW. Depression of protein synthetic capacity due to cloned-gene expression in E. coli. Biotechnology and Bioengineering. 36: 865-78. PMID 18597287 DOI: 10.1002/Bit.260360902 |
0.69 |
|
| 2009 |
Lee J, Attila C, Cirillo SL, Cirillo JD, Wood TK. Indole and 7-hydroxyindole diminish Pseudomonas aeruginosa virulence. Microbial Biotechnology. 2: 75-90. PMID 21261883 DOI: 10.1111/J.1751-7915.2008.00061.X |
0.58 |
|
| 2009 |
Zang T, Lee BW, Cannon LM, Ritter KA, Dai S, Ren D, Wood TK, Zhou ZS. A naturally occurring brominated furanone covalently modifies and inactivates LuxS. Bioorganic & Medicinal Chemistry Letters. 19: 6200-4. PMID 19775890 DOI: 10.1016/J.Bmcl.2009.08.095 |
0.515 |
|
| 2009 |
Ma Q, Wood TK. OmpA influences Escherichia coli biofilm formation by repressing cellulose production through the CpxRA two-component system. Environmental Microbiology. 11: 2735-46. PMID 19601955 DOI: 10.1111/j.1462-2920.2009.02000.x |
0.303 |
|
| 2009 |
Hegde M, Wood TK, Jayaraman A. The neuroendocrine hormone norepinephrine increases Pseudomonas aeruginosa PA14 virulence through the las quorum-sensing pathway. Applied Microbiology and Biotechnology. 84: 763-76. PMID 19517106 DOI: 10.1007/S00253-009-2045-1 |
0.741 |
|
| 2009 |
Wang X, Kim Y, Wood TK. Control and benefits of CP4-57 prophage excision in Escherichia coli biofilms. The Isme Journal. 3: 1164-79. PMID 19458652 DOI: 10.1038/ismej.2009.59 |
0.382 |
|
| 2009 |
Attila C, Ueda A, Wood TK. 5-Fluorouracil reduces biofilm formation in Escherichia coli K-12 through global regulator AriR as an antivirulence compound. Applied Microbiology and Biotechnology. 82: 525-33. PMID 19172264 DOI: 10.1007/s00253-009-1860-8 |
0.338 |
|
| 2009 |
Lee J, Maeda T, Hong SH, Wood TK. Reconfiguring the quorum-sensing regulator SdiA of Escherichia coli to control biofilm formation via indole and N-acylhomoserine lactones. Applied and Environmental Microbiology. 75: 1703-16. PMID 19168658 DOI: 10.1128/Aem.02081-08 |
0.786 |
|
| 2009 |
Wood TK. Insights on Escherichia coli biofilm formation and inhibition from whole-transcriptome profiling. Environmental Microbiology. 11: 1-15. PMID 19125816 DOI: 10.1111/j.1462-2920.2008.01768.x |
0.392 |
|
| 2009 |
Kim Y, Wang X, Ma Q, Zhang XS, Wood TK. Toxin-antitoxin systems in Escherichia coli influence biofilm formation through YjgK (TabA) and fimbriae. Journal of Bacteriology. 191: 1258-67. PMID 19060153 DOI: 10.1128/Jb.01465-08 |
0.307 |
|
| 2008 |
Ueda A, Attila C, Whiteley M, Wood TK. Uracil influences quorum sensing and biofilm formation in Pseudomonas aeruginosa and fluorouracil is an antagonist. Microbial Biotechnology. 2: 62-74. PMID 21261882 DOI: 10.1111/J.1751-7915.2008.00060.X |
0.327 |
|
| 2008 |
Jayaraman A, Wood TK. Bacterial quorum sensing: signals, circuits, and implications for biofilms and disease. Annual Review of Biomedical Engineering. 10: 145-67. PMID 18647113 DOI: 10.1146/Annurev.Bioeng.10.061807.160536 |
0.569 |
|
| 2008 |
García-Contreras R, Zhang XS, Kim Y, Wood TK. Protein translation and cell death: the role of rare tRNAs in biofilm formation and in activating dormant phage killer genes. Plos One. 3: e2394. PMID 18545668 DOI: 10.1371/Journal.Pone.0002394 |
0.364 |
|
| 2008 |
Lee J, Zhang XS, Hegde M, Bentley WE, Jayaraman A, Wood TK. Indole cell signaling occurs primarily at low temperatures in Escherichia coli. The Isme Journal. 2: 1007-23. PMID 18528414 DOI: 10.1038/Ismej.2008.54 |
0.768 |
|
| 2008 |
Yang X, Ma Q, Wood TK. The R1 conjugative plasmid increases Escherichia coli biofilm formation through an envelope stress response. Applied and Environmental Microbiology. 74: 2690-9. PMID 18344336 DOI: 10.1128/AEM.02809-07 |
0.378 |
|
| 2008 |
Zhang XS, García-Contreras R, Wood TK. Escherichia coli transcription factor YncC (McbR) regulates colanic acid and biofilm formation by repressing expression of periplasmic protein YbiM (McbA). The Isme Journal. 2: 615-31. PMID 18309357 DOI: 10.1038/Ismej.2008.24 |
0.324 |
|
| 2008 |
Bansal T, Jesudhasan P, Pillai S, Wood TK, Jayaraman A. Temporal regulation of enterohemorrhagic Escherichia coli virulence mediated by autoinducer-2. Applied Microbiology and Biotechnology. 78: 811-9. PMID 18256823 DOI: 10.1007/S00253-008-1359-8 |
0.72 |
|
| 2007 |
Lee J, Page R, García-Contreras R, Palermino JM, Zhang XS, Doshi O, Wood TK, Peti W. Structure and function of the Escherichia coli protein YmgB: a protein critical for biofilm formation and acid-resistance. Journal of Molecular Biology. 373: 11-26. PMID 17765265 DOI: 10.1016/J.Jmb.2007.07.037 |
0.565 |
|
| 2007 |
Bansal T, Englert D, Lee J, Hegde M, Wood TK, Jayaraman A. Differential effects of epinephrine, norepinephrine, and indole on Escherichia coli O157:H7 chemotaxis, colonization, and gene expression. Infection and Immunity. 75: 4597-607. PMID 17591798 DOI: 10.1128/Iai.00630-07 |
0.796 |
|
| 2007 |
Lee J, Jayaraman A, Wood TK. Indole is an inter-species biofilm signal mediated by SdiA. Bmc Microbiology. 7: 42. PMID 17511876 DOI: 10.1186/1471-2180-7-42 |
0.693 |
|
| 2007 |
Lee J, Bansal T, Jayaraman A, Bentley WE, Wood TK. Enterohemorrhagic Escherichia coli biofilms are inhibited by 7-hydroxyindole and stimulated by isatin. Applied and Environmental Microbiology. 73: 4100-9. PMID 17483266 DOI: 10.1128/Aem.00360-07 |
0.788 |
|
| 2007 |
Zhang XS, García-Contreras R, Wood TK. YcfR (BhsA) influences Escherichia coli biofilm formation through stress response and surface hydrophobicity. Journal of Bacteriology. 189: 3051-62. PMID 17293424 DOI: 10.1128/Jb.01832-06 |
0.354 |
|
| 2007 |
Domka J, Lee J, Bansal T, Wood TK. Temporal gene-expression in Escherichia coli K-12 biofilms. Environmental Microbiology. 9: 332-46. PMID 17222132 DOI: 10.1111/J.1462-2920.2006.01143.X |
0.711 |
|
| 2006 |
Lee J, Cao L, Ow SY, Barrios-Llerena ME, Chen W, Wood TK, Wright PC. Proteome changes after metabolic engineering to enhance aerobic mineralization of cis-1,2-dichloroethylene. Journal of Proteome Research. 5: 1388-97. PMID 16739990 DOI: 10.1021/Pr060008T |
0.493 |
|
| 2006 |
Domka J, Lee J, Wood TK. YliH (BssR) and YceP (BssS) regulate Escherichia coli K-12 biofilm formation by influencing cell signaling. Applied and Environmental Microbiology. 72: 2449-59. PMID 16597943 DOI: 10.1128/Aem.72.4.2449-2459.2006 |
0.617 |
|
| 2006 |
Cao L, Lee J, Chen W, Wood TK. Enantioconvergent production of (R)-1-phenyl-1,2-ethanediol from styrene oxide by combining the Solanum tuberosum and an evolved Agrobacterium radiobacter AD1 epoxide hydrolases. Biotechnology and Bioengineering. 94: 522-9. PMID 16498626 DOI: 10.1002/Bit.20860 |
0.427 |
|
| 2006 |
Wood TK, González Barrios AF, Herzberg M, Lee J. Motility influences biofilm architecture in Escherichia coli. Applied Microbiology and Biotechnology. 72: 361-7. PMID 16397770 DOI: 10.1007/S00253-005-0263-8 |
0.544 |
|
| 2006 |
Herzberg M, Kaye IK, Peti W, Wood TK. YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. Journal of Bacteriology. 188: 587-98. PMID 16385049 DOI: 10.1128/Jb.188.2.587-598.2006 |
0.367 |
|
| 2006 |
González Barrios AF, Zuo R, Hashimoto Y, Yang L, Bentley WE, Wood TK. Autoinducer 2 controls biofilm formation in Escherichia coli through a novel motility quorum-sensing regulator (MqsR, B3022). Journal of Bacteriology. 188: 305-16. PMID 16352847 DOI: 10.1128/Jb.188.1.305-316.2006 |
0.319 |
|
| 2006 |
Barrios AF, Zuo R, Ren D, Wood TK. Hha, YbaJ, and OmpA regulate Escherichia coli K12 biofilm formation and conjugation plasmids abolish motility. Biotechnology and Bioengineering. 93: 188-200. PMID 16317765 DOI: 10.1002/Bit.20681 |
0.605 |
|
| 2005 |
Vardar G, Tao Y, Lee J, Wood TK. Alanine 101 and alanine 110 of the alpha subunit of Pseudomonas stutzeri OX1 toluene-o-xylene monooxygenase influence the regiospecific oxidation of aromatics. Biotechnology and Bioengineering. 92: 652-8. PMID 16116657 DOI: 10.1002/bit.20637 |
0.443 |
|
| 2005 |
Ren D, Zuo R, González Barrios AF, Bedzyk LA, Eldridge GR, Pasmore ME, Wood TK. Differential gene expression for investigation of Escherichia coli biofilm inhibition by plant extract ursolic acid. Applied and Environmental Microbiology. 71: 4022-34. PMID 16000817 DOI: 10.1128/Aem.71.7.4022-4034.2005 |
0.549 |
|
| 2005 |
Rui L, Cao L, Chen W, Reardon KF, Wood TK. Protein engineering of epoxide hydrolase from Agrobacterium radiobacter AD1 for enhanced activity and enantioselective production of (R)-1-phenylethane-1,2-diol. Applied and Environmental Microbiology. 71: 3995-4003. PMID 16000814 DOI: 10.1128/Aem.71.7.3995-4003.2005 |
0.525 |
|
| 2005 |
Jones MB, Jani R, Ren D, Wood TK, Blaser MJ. Inhibition of Bacillus anthracis growth and virulence-gene expression by inhibitors of quorum-sensing. The Journal of Infectious Diseases. 191: 1881-8. PMID 15871122 DOI: 10.1086/429696 |
0.526 |
|
| 2005 |
Ren D, Zuo R, Wood TK. Quorum-sensing antagonist (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone influences siderophore biosynthesis in Pseudomonas putida and Pseudomonas aeruginosa. Applied Microbiology and Biotechnology. 66: 689-95. PMID 15290134 DOI: 10.1007/S00253-004-1691-6 |
0.523 |
|
| 2005 |
Rui L, Reardon KF, Wood TK. Protein engineering of toluene ortho-monooxygenase of Burkholderia cepacia G4 for regiospecific hydroxylation of indole to form various indigoid compounds. Applied Microbiology and Biotechnology. 66: 422-9. PMID 15290130 DOI: 10.1007/S00253-004-1698-Z |
0.545 |
|
| 2004 |
Ren D, Bedzyk LA, Ye RW, Thomas SM, Wood TK. Differential gene expression shows natural brominated furanones interfere with the autoinducer-2 bacterial signaling system of Escherichia coli. Biotechnology and Bioengineering. 88: 630-42. PMID 15470704 DOI: 10.1002/Bit.20259 |
0.678 |
|
| 2004 |
Rui L, Cao L, Chen W, Reardon KF, Wood TK. Active site engineering of the epoxide hydrolase from Agrobacterium radiobacter AD1 to enhance aerobic mineralization of cis-1,2-dichloroethylene in cells expressing an evolved toluene ortho-monooxygenase. The Journal of Biological Chemistry. 279: 46810-7. PMID 15347647 DOI: 10.1074/Jbc.M407466200 |
0.506 |
|
| 2004 |
Ren D, Bedzyk LA, Setlow P, England DF, Kjelleberg S, Thomas SM, Ye RW, Wood TK. Differential gene expression to investigate the effect of (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone on Bacillus subtilis Applied and Environmental Microbiology. 70: 4941-4949. PMID 15294834 DOI: 10.1128/Aem.70.8.4941-4949.2004 |
0.658 |
|
| 2004 |
Rui L, Kwon YM, Fishman A, Reardon KF, Wood TK. Saturation mutagenesis of toluene ortho-monooxygenase of Burkholderia cepacia G4 for Enhanced 1-naphthol synthesis and chloroform degradation. Applied and Environmental Microbiology. 70: 3246-52. PMID 15184118 DOI: 10.1128/Aem.70.6.3246-3252.2004 |
0.552 |
|
| 2004 |
Ren D, Bedzyk LA, Setlow P, Thomas SM, Ye RW, Wood TK. Gene expression in Bacillus subtilis surface biofilms with and without sporulation and the importance of yveR for biofilm maintenance. Biotechnology and Bioengineering. 86: 344-64. PMID 15083514 DOI: 10.1002/Bit.20053 |
0.689 |
|
| 2004 |
Ren D, Bedzyk LA, Ye RW, Thomas SM, Wood TK. Stationary-phase quorum-sensing signals affect autoinducer-2 and gene expression in Escherichia coli. Applied and Environmental Microbiology. 70: 2038-43. PMID 15066794 DOI: 10.1128/Aem.70.4.2038-2043.2004 |
0.657 |
|
| 2004 |
Ren D, Wood TK. (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone reduces corrosion from Desulfotomaculum orientis. Environmental Microbiology. 6: 535-40. PMID 15049927 DOI: 10.1111/J.1462-2920.2004.00587.X |
0.498 |
|
| 2004 |
Rui L, Kwon YM, Reardon KF, Wood TK. Metabolic pathway engineering to enhance aerobic degradation of chlorinated ethenes and to reduce their toxicity by cloning a novel glutathione S-transferase, an evolved toluene o-monooxygenase, and gamma-glutamylcysteine synthetase. Environmental Microbiology. 6: 491-500. PMID 15049922 DOI: 10.1111/J.1462-2920.2004.00586.X |
0.566 |
|
| 2004 |
Ren D, Bedzyk LA, Thomas SM, Ye RW, Wood TK. Gene expression in Escherichia coli biofilms. Applied Microbiology and Biotechnology. 64: 515-24. PMID 14727089 DOI: 10.1007/S00253-003-1517-Y |
0.561 |
|
| 2003 |
Pferdeort VA, Wood TK, Reardon KF. Proteomic changes in Escherichia coli TG1 after metabolic engineering for enhanced trichloroethene biodegradation. Proteomics. 3: 1066-9. PMID 12833531 DOI: 10.1002/Pmic.200300418 |
0.58 |
|
| 2002 |
Ren D, Sims JJ, Wood TK. Inhibition of biofilm formation and swarming of Bacillus subtilis by (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone. Letters in Applied Microbiology. 34: 293-9. PMID 11940163 DOI: 10.1046/J.1472-765X.2002.01087.X |
0.522 |
|
| 2002 |
Ren D, Sims JJ, Wood TK. Inhibition of biofilm formation and swarming of Escherichia coli by (5Z)-4-bromo-5-(bromomethylene)-3-butyl-2(5H)-furanone. Environmental Microbiology. 3: 731-6. PMID 11846763 DOI: 10.1046/J.1462-2920.2001.00249.X |
0.559 |
|
| 2002 |
Canada KA, Iwashita S, Shim H, Wood TK. Directed evolution of toluene ortho-monooxygenase for enhanced 1-naphthol synthesis and chlorinated ethene degradation Journal of Bacteriology. 184: 344-349. PMID 11751810 DOI: 10.1128/Jb.184.2.344-349.2002 |
0.617 |
|
| 2001 |
Ryoo D, Shim H, Arenghi FLG, Barbieri P, Wood TK. Tetrachloroethylene, trichloroethylene, and chlorinated phenols induce toluene-o-xylene monooxygenase activity in Pseudomonas stutzeri OX1 Applied Microbiology and Biotechnology. 56: 545-549. PMID 11549035 DOI: 10.1007/S002530100675 |
0.631 |
|
| 2000 |
Shim H, Wood TK. Aerobic degradation of mixtures of chlorinated aliphatics by cloned toluene-o-xylene monooxygenase and toluene o-monooxygenase in resting cells Biotechnology and Bioengineering. 70: 693-698. PMID 11064339 DOI: 10.1002/1097-0290(20001220)70:6<693::Aid-Bit12>3.0.Co;2-W |
0.572 |
|
| 2000 |
Ryoo D, Shim H, Canada K, Barbieri P, Wood TK. Aerobic degradation of tetrachloroethylene by toluene-o-xylene monooxygenase of Pseudomonas stutzeri OX1 Nature Biotechnology. 18: 775-778. PMID 10888848 DOI: 10.1038/77344 |
0.616 |
|
| 1999 |
Jayaraman A, Mansfeld FB, Wood TK. Inhibiting sulfate-reducing bacteria in biofilms by expressing the antimicrobial peptides indolicidin and bactenecin Journal of Industrial Microbiology and Biotechnology. 22: 167-175. DOI: 10.1038/Sj.Jim.2900627 |
0.587 |
|
| 1998 |
Jayaraman A, Sun AK, Wood TK. Characterization of axenic Pseudomonas fragi and Escherichia coli biofilms that inhibit corrosion of SAE 1018 steel. Journal of Applied Microbiology. 84: 485-92. PMID 9633647 DOI: 10.1046/J.1365-2672.1998.00359.X |
0.611 |
|
| 1997 |
Jayaraman A, Cheng ET, Earthman JC, Wood TK. Axenic aerobic biofilms inhibit corrosion of SAE 1018 steel through oxygen depletion Applied Microbiology and Biotechnology. 48: 11-17. PMID 9274042 DOI: 10.1007/S002530051007 |
0.551 |
|
| 1997 |
Jayaraman A, Cheng ET, Earthman JC, Wood TK. Importance of biofilm formation for corrosion inhibition of SAE 1018 steel by axenic aerobic biofilms Journal of Industrial Microbiology and Biotechnology. 18: 396-401. PMID 9248069 DOI: 10.1038/Sj.Jim.2900396 |
0.575 |
|
| 1997 |
Jayaraman A, Earthman JC, Wood TK. Corrosion inhibition by aerobic biofilms on SAE 1018 steel Applied Microbiology and Biotechnology. 47: 62-68. DOI: 10.1007/S002530050889 |
0.578 |
|
| 1996 |
Jahng D, Kim CS, Hanson RS, Wood TK. Optimization of trichloroethylene degradation using soluble methane monooxygenase of Methylosinus trichosporium OB3b expressed in recombinant bacteria. Biotechnology and Bioengineering. 51: 349-59. PMID 18624367 DOI: 10.1002/(Sici)1097-0290(19960805)51:3<349::Aid-Bit10>3.0.Co;2-H |
0.65 |
|
| 1996 |
Jahng D, Wood TK. Metal ions and chloramphenicol inhibition of soluble methane monooxygenase from Methylosinus trichosporium OB3b Applied Microbiology and Biotechnology. 45: 744-749. DOI: 10.1007/S002530050757 |
0.607 |
|
| 1995 |
Wu K, Jahng D, Wood TK. Temperature and growth rate effects on the hok/sok killer locus for enhanced plasmid stability. Biotechnology Progress. 10: 621-9. PMID 7765697 DOI: 10.1021/Bp00030A600 |
0.653 |
|
| 1994 |
Jahng D, Wood TK. Trichloroethylene and chloroform degradation by a recombinant pseudomonad expressing soluble methane monooxygenase from Methylosinus trichosporium OB3b. Applied and Environmental Microbiology. 60: 2473-82. PMID 8074526 DOI: 10.1128/Aem.60.7.2473-2482.1994 |
0.639 |
|
| 1990 |
Wood TK, Kuhn RH, Peretti SW. Enhanced plasmid stability through post-segregational killing of plasmid-free cells Biotechnology Techniques. 4: 39-44. DOI: 10.1007/Bf00156608 |
0.69 |
|
| Show low-probability matches. |