| Year |
Citation |
Score |
| 2023 |
Bell JC, Dombrowski CC, Plank JL, Jensen RB, Kowalczykowski SC. BRCA2 chaperones RAD51 to single molecules of RPA-coated ssDNA. Proceedings of the National Academy of Sciences of the United States of America. 120: e2221971120. PMID 36976771 DOI: 10.1073/pnas.2221971120 |
0.504 |
|
| 2023 |
Hertzog M, Perry TN, Dupaigne P, Serres S, Morales V, Soulet AL, Bell JC, Margeat E, Kowalczykowski SC, Le Cam E, Fronzes R, Polard P. Assembly mechanism and cryoEM structure of RecA recombination nucleofilaments from Streptococcus pneumoniae. Nucleic Acids Research. PMID 36806960 DOI: 10.1093/nar/gkad080 |
0.506 |
|
| 2022 |
Tuan PM, Gilhooly NS, Marians KJ, Kowalczykowski SC. Direct visualization of translesion DNA synthesis polymerase IV at the replisome. Proceedings of the National Academy of Sciences of the United States of America. 119: e2208390119. PMID 36122225 DOI: 10.1073/pnas.2208390119 |
0.865 |
|
| 2021 |
West SC, Kowalczykowski SC. Charles M. Radding: A love of science and art. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33495365 DOI: 10.1073/pnas.2025935118 |
0.394 |
|
| 2019 |
Jenkins SS, Gore S, Guo X, Liu J, Ede C, Veaute X, Robertson SJ, Kowalczykowski SC, Heyer WD. Role of the Srs2-Rad51 Interaction Domain in Crossover Control in . Genetics. PMID 31142613 DOI: 10.1534/Genetics.119.302337 |
0.435 |
|
| 2017 |
Graham JE, Marians KJ, Kowalczykowski SC. Independent and Stochastic Action of DNA Polymerases in the Replisome. Cell. 169: 1201-1213.e17. PMID 28622507 DOI: 10.1016/J.Cell.2017.05.041 |
0.652 |
|
| 2017 |
Gong Y, Handa N, Kowalczykowski SC, de Lange T. PHF11 promotes DSB resection, ATR signaling, and HR. Genes & Development. PMID 28115467 DOI: 10.1101/Gad.291807.116 |
0.614 |
|
| 2016 |
Pavankumar TL, Exell JC, Kowalczykowski SC. Direct Fluorescent Imaging of Translocation and Unwinding by Individual DNA Helicases. Methods in Enzymology. 581: 1-32. PMID 27793277 DOI: 10.1016/Bs.Mie.2016.09.010 |
0.549 |
|
| 2016 |
Bell JC, Kowalczykowski SC. RecA: Regulation and Mechanism of a Molecular Search Engine. Trends in Biochemical Sciences. PMID 27156117 DOI: 10.1016/J.Tibs.2016.04.002 |
0.669 |
|
| 2016 |
Bell JC, Kowalczykowski SC. Mechanics and Single-Molecule Interrogation of DNA Recombination. Annual Review of Biochemistry. PMID 27088880 DOI: 10.1146/Annurev-Biochem-060614-034352 |
0.633 |
|
| 2016 |
Martinez JS, von Nicolai C, Kim T, Ehlén Å, Mazin AV, Kowalczykowski SC, Carreira A. BRCA2 regulates DMC1-mediated recombination through the BRC repeats. Proceedings of the National Academy of Sciences of the United States of America. PMID 26976601 DOI: 10.1073/Pnas.1601691113 |
0.78 |
|
| 2015 |
Rad B, Forget AL, Baskin RJ, Kowalczykowski SC. Single-molecule visualization of RecQ helicase reveals DNA melting, nucleation, and assembly are required for processive DNA unwinding. Proceedings of the National Academy of Sciences of the United States of America. PMID 26540728 DOI: 10.1073/Pnas.1518028112 |
0.844 |
|
| 2015 |
Kowalczykowski SC. An Overview of the Molecular Mechanisms of Recombinational DNA Repair. Cold Spring Harbor Perspectives in Biology. 7. PMID 26525148 DOI: 10.1101/Cshperspect.A016410 |
0.654 |
|
| 2015 |
Bell JC, Liu B, Kowalczykowski SC. Imaging and energetics of single SSB-ssDNA molecules reveal intramolecular condensation and insight into RecOR function. Elife. 4. PMID 26381353 DOI: 10.7554/Elife.08646 |
0.553 |
|
| 2015 |
Wang AT, Kim T, Wagner JE, Conti BA, Lach FP, Huang AL, Molina H, Sanborn EM, Zierhut H, Cornes BK, Abhyankar A, Sougnez C, Gabriel SB, Auerbach AD, Kowalczykowski SC, et al. A Dominant Mutation in Human RAD51 Reveals Its Function in DNA Interstrand Crosslink Repair Independent of Homologous Recombination. Molecular Cell. 59: 478-90. PMID 26253028 DOI: 10.1016/J.Molcel.2015.07.009 |
0.661 |
|
| 2015 |
Lee KY, Im JS, Shibata E, Park J, Handa N, Kowalczykowski SC, Dutta A. MCM8-9 complex promotes resection of double-strand break ends by MRE11-RAD50-NBS1 complex. Nature Communications. 6: 7744. PMID 26215093 DOI: 10.1038/Ncomms8744 |
0.525 |
|
| 2015 |
Chen H, Donnianni RA, Handa N, Deng SK, Oh J, Timashev LA, Kowalczykowski SC, Symington LS. Sae2 promotes DNA damage resistance by removing the Mre11-Rad50-Xrs2 complex from DNA and attenuating Rad53 signaling. Proceedings of the National Academy of Sciences of the United States of America. 112: E1880-7. PMID 25831494 DOI: 10.1073/Pnas.1503331112 |
0.642 |
|
| 2015 |
Fasching CL, Cejka P, Kowalczykowski SC, Heyer WD. Top3-Rmi1 dissolve Rad51-mediated D loops by a topoisomerase-based mechanism. Molecular Cell. 57: 595-606. PMID 25699708 DOI: 10.1016/J.Molcel.2015.01.022 |
0.515 |
|
| 2015 |
Wang AT, Kim T, Wagner JE, Conti BA, Lach FP, Huang AL, Molina H, Sanborn EM, Zierhut H, Cornes BK, Abhyankar A, Sougnez C, Gabriel SB, Auerbach AD, Kowalczykowski SC, et al. A Dominant Mutation in Human RAD51 Reveals Its Function in DNA Interstrand Crosslink Repair Independent of Homologous Recombination Molecular Cell. 59: 478-490. DOI: 10.1016/j.molcel.2015.07.009 |
0.444 |
|
| 2014 |
Morimatsu K, Kowalczykowski SC. RecQ helicase and RecJ nuclease provide complementary functions to resect DNA for homologous recombination. Proceedings of the National Academy of Sciences of the United States of America. 111: E5133-42. PMID 25411316 DOI: 10.1073/Pnas.1420009111 |
0.714 |
|
| 2014 |
Bocquet N, Bizard AH, Abdulrahman W, Larsen NB, Faty M, Cavadini S, Bunker RD, Kowalczykowski SC, Cejka P, Hickson ID, Thomä NH. Structural and mechanistic insight into Holliday-junction dissolution by Topoisomerase IIIα and RMI1 Nature Structural and Molecular Biology. 21: 261-268. PMID 24509834 DOI: 10.1038/Nsmb.2775 |
0.617 |
|
| 2014 |
Morimatsu K, Kowalczykowski SC. RecQ helicase and RecJ nuclease provide complementary functions to resect DNA for homologous recombination Proceedings of the National Academy of Sciences of the United States of America. 111: E5133-E5142. DOI: 10.1073/pnas.1420009111 |
0.55 |
|
| 2014 |
Gyimesi M, Plank JL, Bell JC, Graham JE, Dombrowski CC, Kowalczykowski SC. Nucleosome Positioning on Lambda DNA for Single-Molecule Analysis of Chromatin Remodeling - Development of a Versatile Lambda DNA Construct Capable of Reception of any DNA Sequences of Interest Biophysical Journal. 106: 70a. DOI: 10.1016/J.Bpj.2013.11.462 |
0.664 |
|
| 2013 |
Liu B, Baskin RJ, Kowalczykowski SC. DNA unwinding heterogeneity by RecBCD results from static molecules able to equilibrate Nature. 500: 482-485. PMID 23851395 DOI: 10.1038/Nature12333 |
0.487 |
|
| 2013 |
Paeschke K, Bochman ML, Garcia PD, Cejka P, Friedman KL, Kowalczykowski SC, Zakian VA. Pif1 family helicases suppress genome instability at G-quadruplex motifs. Nature. 497: 458-62. PMID 23657261 DOI: 10.1038/Nature12149 |
0.49 |
|
| 2013 |
Cannavo E, Cejka P, Kowalczykowski SC. Relationship of DNA degradation by Saccharomyces cerevisiae Exonuclease 1 and its stimulation by RPA and Mre11-Rad50-Xrs2 to DNA end resection Proceedings of the National Academy of Sciences of the United States of America. 110: E1661-E1668. PMID 23589858 DOI: 10.1073/Pnas.1305166110 |
0.696 |
|
| 2013 |
Forget AL, Dombrowski CC, Amitani I, Kowalczykowski SC. Exploring protein-DNA interactions in 3D using in situ construction, manipulation and visualization of individual DNA dumbbells with optical traps, microfluidics and fluorescence microscopy Nature Protocols. 8: 525-538. PMID 23411634 DOI: 10.1038/Nprot.2013.016 |
0.64 |
|
| 2013 |
Jensen RB, Ozes A, Kim T, Estep A, Kowalczykowski SC. BRCA2 is epistatic to the RAD51 paralogs in response to DNA damage Dna Repair. 12: 306-311. PMID 23384538 DOI: 10.1016/J.Dnarep.2012.12.007 |
0.682 |
|
| 2013 |
Kowalczykowski S. Watching Individual DNA Helicases and Motor Proteins Behaving and Misbehaving Biophysical Journal. 104: 4a. DOI: 10.1016/J.Bpj.2012.11.042 |
0.637 |
|
| 2012 |
Bell JC, Plank JL, Dombrowski CC, Kowalczykowski SC. Direct imaging of RecA nucleation and growth on single molecules of SSB-coated ssDNA Nature. 491: 274-278. PMID 23103864 DOI: 10.1038/Nature11598 |
0.57 |
|
| 2012 |
Morimatsu K, Wu Y, Kowalczykowski SC. RecFOR proteins target RecA protein to a DNA gap with either DNA or RNA at the 5′ terminus: Implication for repair of stalled replication forks Journal of Biological Chemistry. 287: 35621-35630. PMID 22902627 DOI: 10.1074/Jbc.M112.397034 |
0.769 |
|
| 2012 |
Cejka P, Plank JL, Dombrowski CC, Kowalczykowski SC. Decatenation of DNA by the S. cerevisiae Sgs1-Top3-Rmi1 and RPA Complex: A Mechanism for Disentangling Chromosomes Molecular Cell. 47: 886-896. PMID 22885009 DOI: 10.1016/J.Molcel.2012.06.032 |
0.705 |
|
| 2012 |
Nimonkar AV, Dombrowski CC, Siino JS, Stasiak AZ, Stasiak A, Kowalczykowski SC. Saccharomyces cerevisiae Dmc1 and Rad51 proteins preferentially function with Tid1 and Rad54 proteins, respectively, to promote DNA strand invasion during genetic recombination. The Journal of Biological Chemistry. 287: 28727-37. PMID 22761450 DOI: 10.1074/Jbc.M112.373290 |
0.601 |
|
| 2012 |
Ciccia A, Nimonkar AV, Hu Y, Hajdu I, Achar YJ, Izhar L, Petit SA, Adamson B, Yoon JC, Kowalczykowski SC, Livingston DM, Haracska L, Elledge SJ. Polyubiquitinated PCNA recruits the ZRANB3 translocase to maintain genomic integrity after replication stress. Molecular Cell. 47: 396-409. PMID 22704558 DOI: 10.1016/J.Molcel.2012.05.024 |
0.624 |
|
| 2012 |
Handa N, Yang L, Dillingham MS, Kobayashi I, Wigley DB, Kowalczykowski SC. Molecular determinants responsible for recognition of the single-stranded DNA regulatory sequence, χ, by RecBCD enzyme Proceedings of the National Academy of Sciences of the United States of America. 109: 8901-8906. PMID 22603794 DOI: 10.1073/Pnas.1206076109 |
0.574 |
|
| 2012 |
Yang L, Handa N, Liu B, Dillingham MS, Wigley DB, Kowalczykowski SC. Alteration of χ recognition by RecBCD reveals a regulated molecular latch and suggests a channel-bypass mechanism for biological control Proceedings of the National Academy of Sciences of the United States of America. 109: 8907-8912. PMID 22603793 DOI: 10.1073/Pnas.1206081109 |
0.613 |
|
| 2012 |
Rad B, Kowalczykowski SC. Translocation of E. coli RecQ helicase on single-stranded DNA Biochemistry. 51: 2921-2929. PMID 22409300 DOI: 10.1021/Bi3000676 |
0.826 |
|
| 2012 |
Forget AL, Kowalczykowski SC. Single-molecule imaging of DNA pairing by RecA reveals a three-dimensional homology search Nature. 482: 423-427. PMID 22318518 DOI: 10.1038/Nature10782 |
0.685 |
|
| 2012 |
Rad B, Kowalczykowski SC. Efficient coupling of ATP hydrolysis to translocation by RecQ helicase Proceedings of the National Academy of Sciences of the United States of America. 109: 1443-1448. PMID 22307597 DOI: 10.1073/Pnas.1119952109 |
0.81 |
|
| 2012 |
Amitani I, Dombrowski C, Baskin R, Kowalczykowski S. 1PS045 RAD54, A CHROMATIN REMODELER, TRANSLOCATES ALONG DNA BY TRACKING THE DNA HELIX(The 50th Annual Meeting of the Biophysical Society of Japan) Seibutsu Butsuri. 52: S82. DOI: 10.2142/Biophys.52.S82_1 |
0.598 |
|
| 2012 |
Liu B, Kowalczykowski SC. The Heterogeneity of DNA Unwinding by RecBCD Molecules Reflects Individual Conformations Stabilized by Ligand Binding: A Manifestation of the Ergodic Hypothesis Biophysical Journal. 102: 63a. DOI: 10.1016/J.Bpj.2011.11.375 |
0.507 |
|
| 2011 |
Carreira A, Kowalczykowski SC. Two classes of BRC repeats in BRCA2 promote RAD51 nucleoprotein filament function by distinct mechanisms Proceedings of the National Academy of Sciences of the United States of America. 108: 10448-10453. PMID 21670257 DOI: 10.1073/Pnas.1106971108 |
0.571 |
|
| 2011 |
Nimonkar AV, Genschel J, Kinoshita E, Polaczek P, Campbell JL, Wyman C, Modrich P, Kowalczykowski SC. BLM-DNA2-RPA-MRN and EXO1-BLM-RPA-MRN constitute two DNA end resection machineries for human DNA break repair Genes and Development. 25: 350-362. PMID 21325134 DOI: 10.1101/Gad.2003811 |
0.683 |
|
| 2010 |
Cejka P, Plank JL, Bachrati CZ, Hickson ID, Kowalczykowski SC. Rmi1 stimulates decatenation of double Holliday junctions during dissolution by Sgs1-Top3 Nature Structural and Molecular Biology. 17: 1377-1382. PMID 20935631 DOI: 10.1038/Nsmb.1919 |
0.576 |
|
| 2010 |
Cejka P, Cannavo E, Polaczek P, Masuda-Sasa T, Pokharel S, Campbell JL, Kowalczykowski SC. DNA end resection by Dna2-Sgs1-RPA and its stimulation by Top3-Rmi1 and Mre11-Rad50-Xrs2 Nature. 467: 112-116. PMID 20811461 DOI: 10.1038/Nature09355 |
0.716 |
|
| 2010 |
Jensen RB, Carreira A, Kowalczykowski SC. Purified human BRCA2 stimulates RAD51-mediated recombination Nature. 467: 678-683. PMID 20729832 DOI: 10.1038/Nature09399 |
0.591 |
|
| 2010 |
Amitani I, Liu B, Dombrowski CC, Baskin RJ, Kowalczykowski SC. Watching individual proteins acting on single molecules of DNA. Methods in Enzymology. 472: 261-291. PMID 20580968 DOI: 10.1016/S0076-6879(10)72007-3 |
0.647 |
|
| 2010 |
Forget AL, Kowalczykowski SC. Single-molecule imaging brings Rad51 nucleoprotein filaments into focus Trends in Cell Biology. 20: 269-276. PMID 20299221 DOI: 10.1016/J.Tcb.2010.02.004 |
0.705 |
|
| 2010 |
Cejka P, Kowalczykowski SC. The full-length Saccharomyces cerevisiae Sgs1 protein is a vigorous DNA helicase that preferentially unwinds holliday junctions Journal of Biological Chemistry. 285: 8290-8301. PMID 20086270 DOI: 10.1074/Jbc.M109.083196 |
0.735 |
|
| 2010 |
Kemp MG, Mason AC, Carreira A, Reardon JT, Haring SJ, Borgstahl GE, Kowalczykowski SC, Sancar A, Wold MS. An alternative form of replication protein a expressed in normal human tissues supports DNA repair. The Journal of Biological Chemistry. 285: 4788-97. PMID 19996105 DOI: 10.1074/Jbc.M109.079418 |
0.647 |
|
| 2010 |
Hilario J, Kowalczykowski SC. Visualizing protein-DNA interactions at the single-molecule level Current Opinion in Chemical Biology. 14: 15-22. PMID 19945909 DOI: 10.1016/J.Cbpa.2009.10.035 |
0.688 |
|
| 2010 |
Amitani I, Nimonkar AV, Baskin RJ, Kowalczykowski SC. Real-Time Visualization of Assembly and Disassembly of S. Cerevisiae Rad51 on Duplex DNA Biophysical Journal. 98: 66a. DOI: 10.1016/J.Bpj.2009.12.378 |
0.711 |
|
| 2010 |
Bell JC, Kowalczykowski SC. Direct Visualization of Fluorescent SSB on Single Molecules of ssDNA as a Mechanistic Probe in the Early Stages of Homologous Recombination Biophysical Journal. 98: 64a. DOI: 10.1016/J.Bpj.2009.12.365 |
0.599 |
|
| 2009 |
Carreira A, Kowalczykowski SC. BRCA2: Shining light on the regulation of DNA-binding selectivity by RAD51 Cell Cycle. 8: 3445-3447. PMID 19838057 DOI: 10.4161/Cc.8.21.9748 |
0.662 |
|
| 2009 |
Nimonkar AV, Kowalczykowski SC. Second-end DNA capture in double-strand break repair: How to catch a DNA by its tail Cell Cycle. 8: 1816-1817. PMID 19471119 DOI: 10.4161/Cc.8.12.8935 |
0.641 |
|
| 2009 |
Handa N, Morimatsu K, Lovett ST, Kowalczykowski SC. Reconstitution of initial steps of dsDNA break repair by the RecF pathway of E. coli Genes and Development. 23: 1234-1245. PMID 19451222 DOI: 10.1101/Gad.1780709 |
0.641 |
|
| 2009 |
Handa N, Amitani I, Gumlaw N, Sandler SJ, Kowalczykowski SC. Single molecule analysis of a red fluorescent RecA protein reveals a defect in nucleoprotein filament nucleation that relates to its reduced biological functions Journal of Biological Chemistry. 284: 18664-18673. PMID 19419960 DOI: 10.1074/Jbc.M109.004895 |
0.667 |
|
| 2009 |
Carreira A, Hilario J, Amitani I, Baskin RJ, Shivji MKK, Venkitaraman AR, Kowalczykowski SC. The BRC Repeats of BRCA2 Modulate the DNA-Binding Selectivity of RAD51 Cell. 136: 1032-1043. PMID 19303847 DOI: 10.1016/J.Cell.2009.02.019 |
0.698 |
|
| 2009 |
Haseltine CA, Kowalczykowski SC. An archaeal Rad54 protein remodels DNA and stimulates DNA strand exchange by RadA Nucleic Acids Research. 37: 2757-2770. PMID 19282450 DOI: 10.1093/Nar/Gkp068 |
0.732 |
|
| 2009 |
Nimonkar AV, Sica RA, Kowalczykowski SC. Rad52 promotes second-end DNA capture in double-stranded break repair to form complement-stabilized joint molecules Proceedings of the National Academy of Sciences of the United States of America. 106: 3077-3082. PMID 19204284 DOI: 10.1073/Pnas.0813247106 |
0.592 |
|
| 2009 |
Hilario J, Amitani I, Baskin RJ, Kowalczykowski SC. Direct imaging of human Rad51 nucleoprotein dynamics on individual DNA molecules Proceedings of the National Academy of Sciences of the United States of America. 106: 361-368. PMID 19122145 DOI: 10.1073/Pnas.0811965106 |
0.666 |
|
| 2009 |
Amitani I, Nimoakar AV, Baskin RJ, Kowalczykowski SC. 3P-089 Visualization of the assembly and disassembly of S cerevisiae Rad51 on duplex DNA in real-time(Nucleic acid binding proteins,The 47th Annual Meeting of the Biophysical Society of Japan) Seibutsu Butsuri. 49: S166. DOI: 10.2142/Biophys.49.S166_2 |
0.52 |
|
| 2009 |
Kowalczykowski S. Visualization of Recombinational DNA Repair at the Single-Molecule Level Biophysical Journal. 96: 553a. DOI: 10.1016/J.Bpj.2008.12.3633 |
0.603 |
|
| 2008 |
Dillingham MS, Kowalczykowski SC. RecBCD enzyme and the repair of double-stranded DNA breaks Microbiology and Molecular Biology Reviews. 72: 642-671. PMID 19052323 DOI: 10.1128/Mmbr.00020-08 |
0.655 |
|
| 2008 |
Nimonkar AV, Özsoy AZ, Genschel J, Modrich P, Kowalczykowski SC. Human exonuclease 1 and BLM helicase interact to resect DNA and initiate DNA repair Proceedings of the National Academy of Sciences of the United States of America. 105: 16906-16911. PMID 18971343 DOI: 10.1073/Pnas.0809380105 |
0.688 |
|
| 2008 |
Dillingham MS, Tibbles KL, Hunter JL, Bell JC, Kowalczykowski SC, Webb MR. Fluorescent single-stranded DNA binding protein as a probe for sensitive, real-time assays of helicase activity Biophysical Journal. 95: 3330-3339. PMID 18599625 DOI: 10.1529/Biophysj.108.133512 |
0.689 |
|
| 2008 |
Kowalczykowski SC. Structural biology: Snapshots of DNA repair Nature. 453: 463-466. PMID 18497811 DOI: 10.1038/453463A |
0.662 |
|
| 2008 |
Wu Y, Kantake N, Sugiyama T, Kowalczykowski SC. Rad51 protein controls Rad52-mediated DNA annealing Journal of Biological Chemistry. 283: 14883-14892. PMID 18337252 DOI: 10.1074/Jbc.M801097200 |
0.887 |
|
| 2007 |
Spies M, Amitani I, Baskin RJ, Kowalczykowski SC. RecBCD Enzyme Switches Lead Motor Subunits in Response to χ Recognition Cell. 131: 694-705. PMID 18022364 DOI: 10.1016/J.Cell.2007.09.023 |
0.384 |
|
| 2007 |
Nimonkar AV, Amitani I, Baskin RJ, Kowalczykowski SC. Single molecule imaging of Tid1/Rdh54, a Rad54 homolog that translocates on duplex DNA and can disrupt joint molecules Journal of Biological Chemistry. 282: 30776-30784. PMID 17704061 DOI: 10.1074/Jbc.M704767200 |
0.706 |
|
| 2007 |
Galletto R, Kowalczykowski SC. RecA Current Biology. 17: R395-R397. PMID 17550759 DOI: 10.1016/j.cub.2007.03.009 |
0.46 |
|
| 2007 |
Handa N, Kowalczykowski SC. A RecA Mutant, RecA730, Suppresses the Recombination Deficiency of the RecBC1004D-χ* Interaction in Vitro and in Vivo Journal of Molecular Biology. 365: 1314-1325. PMID 17141804 DOI: 10.1016/J.Jmb.2006.10.090 |
0.637 |
|
| 2006 |
Sugiyama T, Kantake N, Wu Y, Kowalczykowski SC. Rad52-mediated DNA annealing after Rad51-mediated DNA strand exchange promotes second ssDNA capture Embo Journal. 25: 5539-5548. PMID 17093500 DOI: 10.1038/Sj.Emboj.7601412 |
0.888 |
|
| 2006 |
Wu Y, Siino JS, Sugiyama T, Kowalczykowski SC. The DNA binding preference of RAD52 and RAD59 proteins: Implications for RAD52 and RAD59 protein function in homologous recombination Journal of Biological Chemistry. 281: 40001-40009. PMID 17040915 DOI: 10.1074/Jbc.M608071200 |
0.784 |
|
| 2006 |
Galletto R, Amitani I, Baskin RJ, Kowalczykowski SC. Direct observation of individual RecA filaments assembling on single DNA molecules Nature. 443: 875-878. PMID 16988658 DOI: 10.1038/Nature05197 |
0.613 |
|
| 2006 |
Amitani I, Baskin RJ, Kowalczykowski SC. Visualization of Rad54, a Chromatin Remodeling Protein, Translocating on Single DNA Molecules Molecular Cell. 23: 143-148. PMID 16818238 DOI: 10.1016/J.Molcel.2006.05.009 |
0.664 |
|
| 2006 |
Seitz EM, Kowalczykowski SC. Human Rad51 protein displays enhanced homologous pairing of DNA sequences resembling those at genetically unstable loci Nucleic Acids Research. 34: 2847-2852. PMID 16723430 DOI: 10.1093/Nar/Gkl355 |
0.869 |
|
| 2006 |
Chédin F, Handa N, Dillingham MS, Kowalczykowski SC. The addAB helicase/nuclease forms a stable complex with its cognate χ sequence during translocation Journal of Biological Chemistry. 281: 18610-18617. PMID 16632468 DOI: 10.1074/Jbc.M600882200 |
0.546 |
|
| 2006 |
Wu Y, Sugiyama T, Kowalczykowski SC. DNA annealing mediated by Rad52 and Rad59 proteins Journal of Biological Chemistry. 281: 15441-15449. PMID 16565518 DOI: 10.1074/Jbc.M601827200 |
0.73 |
|
| 2006 |
Spies M, Kowalczykowski SC. The RecA binding locus of RecBCD is a general domain for recruitment of DNA strand exchange proteins Molecular Cell. 21: 573-580. PMID 16483938 DOI: 10.1016/J.Molcel.2006.01.007 |
0.661 |
|
| 2006 |
Amitani I, Baskin RJ, Kowalczykowski SC. 1P259 Direct visualization of a chromatin-remodeling protein, Rad54, translocating along single-molecules of double-stranded DNA(9. Molecular motor (I),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006) Seibutsu Butsuri. 46: S211. DOI: 10.2142/Biophys.46.S211_3 |
0.511 |
|
| 2005 |
Dillingham MS, Webb MR, Kowalczykowski SC. Bipolar DNA translocation contributes to highly processive DNA unwinding by RecBCD enzyme Journal of Biological Chemistry. 280: 37069-37077. PMID 16041061 DOI: 10.1074/Jbc.M505520200 |
0.612 |
|
| 2005 |
Spies M, Dillingham MS, Kowalczykowski SC. Translocation by the RecB motor is an absolute requirement for {chi}-recognition and RecA protein loading by RecBCD enzyme. The Journal of Biological Chemistry. 280: 37078-87. PMID 16041060 DOI: 10.1074/Jbc.M505521200 |
0.449 |
|
| 2005 |
Thomä NH, Czyzewski BK, Alexeev AA, Mazin AV, Kowalczykowski SC, Pavletich NP. Structure of the SWI2/SNF2 chromatin-remodeling domain of eukaryotic Rad54 Nature Structural and Molecular Biology. 12: 350-356. PMID 15806108 DOI: 10.1038/Nsmb919 |
0.748 |
|
| 2005 |
Handa N, Bianco PR, Baskin RJ, Kowalczykowski SC. Direct visualization of RecBCD movement reveals cotranslocation of the RecD motor after χ recognition Molecular Cell. 17: 745-750. PMID 15749023 DOI: 10.1016/J.Molcel.2005.02.011 |
0.375 |
|
| 2005 |
Kowalczykowski SC. Cancer: Catalyst of a catalyst Nature. 433: 591-592. PMID 15703734 DOI: 10.1038/433591A |
0.433 |
|
| 2004 |
Singleton MR, Dillingham MS, Gaudier M, Kowalczykowski SC, Wigley DB. Crystal structure of RecBCD enzyme reveals a machine for processing DNA breaks Nature. 432: 187-193. PMID 15538360 DOI: 10.1038/Nature02988 |
0.653 |
|
| 2004 |
Mazina OM, Mazin AV, Nakagawa T, Kolodner RD, Kowalczykowski SC. Saccharomyces cerevisiae Mer3 helicase stimulates 3′-5′ heteroduplex extension by Rad51: Implications for crossover control in meiotic recombination Cell. 117: 47-56. PMID 15066281 DOI: 10.1016/S0092-8674(04)00294-6 |
0.815 |
|
| 2003 |
Spies M, Bianco PR, Dillingham MS, Handa N, Baskin RJ, Kowalczykowski SC. A molecular throttle: The recombination hotspot χ controls DNA translocation by the RecBCD helicase Cell. 114: 647-654. PMID 13678587 DOI: 10.1016/S0092-8674(03)00681-0 |
0.554 |
|
| 2003 |
Harmon FG, Brockman JP, Kowalczykowski SC. RecQ Helicase Stimulates Both DNA Catenation and Changes in DNA Topology by Topoisomerase III Journal of Biological Chemistry. 278: 42668-42678. PMID 12909639 DOI: 10.1074/Jbc.M302994200 |
0.691 |
|
| 2003 |
Dillingham MS, Spies M, Kowalczykowski SC. RecBCD enzyme is a bipolar DNA helicase Nature. 423: 893-897. PMID 12815438 DOI: 10.1038/Nature01673 |
0.683 |
|
| 2003 |
Morimatsu K, Kowalczykowski SC. RecFOR proteins load RecA protein onto gapped DNA to accelerate DNA strand exchange: A universal step of recombinational repair Molecular Cell. 11: 1337-1347. PMID 12769856 DOI: 10.1016/S1097-2765(03)00188-6 |
0.714 |
|
| 2003 |
Veaute X, Jeusset J, Soustelle C, Kowalczykowski SC, Le Cam E, Fahre F. The Srs2 helicase prevents recombination by disrupting Rad51 nucleoprotein filaments Nature. 423: 309-312. PMID 12748645 DOI: 10.1038/Nature01585 |
0.661 |
|
| 2003 |
Mirshad JK, Kowalczykowski SC. Biochemical characterization of a mutant RecA protein altered in DNA-binding loop 1 Biochemistry. 42: 5945-5954. PMID 12741853 DOI: 10.1021/Bi027233I |
0.715 |
|
| 2003 |
Mirshad JK, Kowalczykowski SC. Biochemical basis of the constitutive coprotease activity of RecA P67W protein Biochemistry. 42: 5937-5944. PMID 12741852 DOI: 10.1021/Bi027232Q |
0.669 |
|
| 2003 |
Kantake N, Sugiyama T, Kolodner RD, Kowalczykowski SC. The recombination-deficient mutant RPA (rfa1-t11) is displaced slowly from single-stranded DNA by Rad51 protein Journal of Biological Chemistry. 278: 23410-23417. PMID 12697761 DOI: 10.1074/Jbc.M302995200 |
0.86 |
|
| 2003 |
Alexeev A, Mazin A, Kowalczykowski SC. Rad54 protein possesses chromatin-remodeling activity stimulated by the Rad51-ssDNA nucleoprotein filament Nature Structural Biology. 10: 182-186. PMID 12577053 DOI: 10.1038/Nsb901 |
0.822 |
|
| 2003 |
Mazin AV, Alexeev AA, Kowalczykowski SC. A novel function of Rad54 protein: Stabilization of the Rad51 nucleoprotein filament Journal of Biological Chemistry. 278: 14029-14036. PMID 12566442 DOI: 10.1074/Jbc.M212779200 |
0.827 |
|
| 2003 |
Lio YC, Mazin AV, Kowalczykowski SC, Chen DJ. Complex formation by the human Rad51B and Rad51C DNA repair proteins and their activities in vitro Journal of Biological Chemistry. 278: 2469-2478. PMID 12427746 DOI: 10.1074/Jbc.M211038200 |
0.837 |
|
| 2003 |
Stohl EA, Brockman JP, Burkle KL, Morimatsu K, Kowalczykowski SC, Seifert HS. Escherichia coli RecX inhibits RecA recombinase and coprotease activities in vitro and in vivo Journal of Biological Chemistry. 278: 2278-2285. PMID 12427742 DOI: 10.1074/Jbc.M210496200 |
0.569 |
|
| 2002 |
Kowalczykowski SC. Molecular mimicry connects BRCA2 to Rad51 and recombinational DNA repair Nature Structural Biology. 9: 897-899. PMID 12447354 DOI: 10.1038/Nsb1202-897 |
0.514 |
|
| 2002 |
Kantake N, Madiraju MVVM, Sugiyama T, Kowalczykowski SC. Escherichia coli RecO protein anneals ssDNA complexed with its cognate ssDNA-binding protein: A common step in genetic recombination Proceedings of the National Academy of Sciences of the United States of America. 99: 15327-15332. PMID 12438681 DOI: 10.1073/Pnas.252633399 |
0.841 |
|
| 2002 |
Sugiyama T, Kowalczykowski SC. Rad52 protein associates with replication protein A (RPA)-single-stranded DNA to accelerate Rad51-mediated displacement of RPA and presynaptic complex formation Journal of Biological Chemistry. 277: 31663-31672. PMID 12077133 DOI: 10.1074/Jbc.M203494200 |
0.649 |
|
| 2002 |
New JH, Kowalczykowski SC. Rad52 protein has a second stimulatory role in DNA strand exchange that complements replication protein-A function Journal of Biological Chemistry. 277: 26171-26176. PMID 12004070 DOI: 10.1074/Jbc.M203670200 |
0.716 |
|
| 2002 |
Haseltine CA, Kowalczykowski SC. A distinctive single-stranded DNA-binding protein from the Archaeon Sulfolobus solfataricus Molecular Microbiology. 43: 1505-1515. PMID 11971263 DOI: 10.1046/J.1365-2958.2002.02807.X |
0.673 |
|
| 2002 |
Chédin F, Kowalczykowski SC. A novel family of regulated helicases/nucleases from Gram-positive bacteria: Insights into the initiation of DNA recombination Molecular Microbiology. 43: 823-834. PMID 11929535 DOI: 10.1046/J.1365-2958.2002.02785.X |
0.517 |
|
| 2001 |
Yang S, Yu X, Seitz EM, Kowalczykowski SC, Egelman EH. Archaeal RadA protein binds DNA as both helical filaments and octameric rings Journal of Molecular Biology. 314: 1077-1085. PMID 11743724 DOI: 10.1006/Jmbi.2000.5213 |
0.885 |
|
| 2001 |
Dillingham MS, Kowalczykowski SC. A step backward in advancing DNA replication: Rescue of stalled replication forks by RecG Molecular Cell. 8: 734-736. PMID 11684009 DOI: 10.1016/S1097-2765(01)00358-6 |
0.63 |
|
| 2001 |
Seitz EM, Haseltine CA, Kowalczykowski SC. DNA recombination and repair in the Archaea Advances in Applied Microbiology. 50: 101-169. PMID 11677683 DOI: 10.1016/S0065-2164(01)50005-2 |
0.865 |
|
| 2001 |
Solinger JA, Lutz G, Sugiyama T, Kowalczykowski SC, Heyer WD. Rad54 protein stimulates heteroduplex DNA formation in the synaptic phase of DNA strand exchange via specific interactions with the presynaptic Rad51 nucleoprotein filament Journal of Molecular Biology. 307: 1207-1221. PMID 11292336 DOI: 10.1006/Jmbi.2001.4555 |
0.718 |
|
| 2001 |
Bianco PR, Brewer LR, Corzett M, Balhorn R, Yeh Y, Kowalczykowski SC, Baskin RJ. Processive tanslocation and DNA unwinding by individual RecBCD enzyme molecules Nature. 409: 374-378. PMID 11201750 DOI: 10.1038/35053131 |
0.568 |
|
| 2001 |
Harmon FG, Kowalczykowski SC. Biochemical characterization of the DNA helicase activity of the Escherichia coli RecQ helicase Journal of Biological Chemistry. 276: 232-243. PMID 11024023 DOI: 10.1074/Jbc.M006555200 |
0.647 |
|
| 2000 |
Mazin AV, Bornarth CJ, Solinger JA, Heyer WD, Kowalczykowski SC. Rad54 protein is targeted to pairing loci by the Rad51 nucleoprotein filament Molecular Cell. 6: 583-592. PMID 11030338 DOI: 10.1016/S1097-2765(00)00057-5 |
0.799 |
|
| 2000 |
Harmon FG, Kowalczykowski SC. Coupling of DNA helicase function to DNA strand exchange activity. Methods in Molecular Biology (Clifton, N.J.). 152: 75-89. PMID 10957970 |
0.568 |
|
| 2000 |
Seitz EM, Kowalczykowski SC. The DNA binding and pairing preferences of the archaeal RadA protein demonstrate a universal characteristic of DNA strand exchange proteins Molecular Microbiology. 37: 555-560. PMID 10931349 DOI: 10.1046/J.1365-2958.2000.02009.X |
0.874 |
|
| 2000 |
Arnold DA, Handa N, Kobayashi I, Kowalczykowski SC. A novel, 11 nucleotide variant of χ, χ*: One of a class of sequences defining the Escherichia coli recombination hotspot χ Journal of Molecular Biology. 300: 469-479. PMID 10884344 DOI: 10.1006/Jmbi.2000.3861 |
0.365 |
|
| 2000 |
Blanco PR, Kowalczykowski SC. Translocation step size and mechanism of the RecBC DNA helicase Nature. 405: 368-372. PMID 10830968 DOI: 10.1038/35012652 |
0.688 |
|
| 2000 |
Arnold DA, Kowalczykowski SC. Facilitated loading of RecA protein is essential to recombination by RecBCD enzyme Journal of Biological Chemistry. 275: 12261-12265. PMID 10766864 DOI: 10.1074/Jbc.275.16.12261 |
0.575 |
|
| 2000 |
Chédin F, Ehrlich SD, Kowalczykowski SC. The Bacillus subtilis AddAB helicase/nuclease is regulated by its cognate Chi sequence in vitro. Journal of Molecular Biology. 298: 7-20. PMID 10756102 DOI: 10.1006/Jmbi.2000.3556 |
0.628 |
|
| 2000 |
Kowalczykowski SC. Initiation of genetic recombination and recombination-dependent replication Trends in Biochemical Sciences. 25: 156-165. PMID 10754547 DOI: 10.1016/S0968-0004(00)01569-3 |
0.705 |
|
| 2000 |
Kowalczykowski S, von Hippel P. Tokio kogoma (1939-1997) Trends in Biochemical Sciences. 25: 155. PMID 10754546 DOI: 10.1016/S0968-0004(00)01572-3 |
0.586 |
|
| 2000 |
Zaitsev EN, Kowalczykowski SC. A novel pairing process promoted by Escherichia coli RecA protein: Inverse DNA and RNA strand exchange Genes and Development. 14: 740-749. PMID 10733533 DOI: 10.1101/Gad.14.6.740 |
0.666 |
|
| 2000 |
Churchill JJ, Kowalczykowski SC. Identification of the RecA protein-loading domain of RecBCD enzyme Journal of Molecular Biology. 297: 537-542. PMID 10731409 DOI: 10.1006/Jmbi.2000.3590 |
0.585 |
|
| 2000 |
Mazin AV, Zaitseva E, Sung P, Kowalczykowski SC. Tailed duplex DNA is the preferred substrate for Rad51 protein-mediated homologous pairing Embo Journal. 19: 1148-1156. PMID 10698955 DOI: 10.1093/Emboj/19.5.1148 |
0.829 |
|
| 1999 |
Zaitsev EN, Kowalczykowski SC. Enhanced monomer-monomer interactions can suppress the recombination deficiency of the recA142 allele Molecular Microbiology. 34: 1-9. PMID 10540281 DOI: 10.1046/J.1365-2958.1999.01552.X |
0.533 |
|
| 1999 |
Anderson DG, Churchill JJ, Kowalczykowski SC. A single mutation, RecB(D1080A), eliminates RecA protein loading but not Chi recognition by RecBCD enzyme Journal of Biological Chemistry. 274: 27139-27144. PMID 10480929 DOI: 10.1074/Jbc.274.38.27139 |
0.647 |
|
| 1999 |
Mazin AV, Kowalczykowski SC. A novel property of the RecA nucleoprotein filament: Activation of double-stranded DNA for strand exchange in trans Genes and Development. 13: 2005-2016. PMID 10444598 DOI: 10.1101/Gad.13.15.2005 |
0.817 |
|
| 1999 |
Harmon FG, DiGate RJ, Kowalczykowski SC. RecQ helicase and topoisomerase III comprise a novel DNA strand passage function: a conserved mechanism for control of DNA recombination. Molecular Cell. 3: 611-20. PMID 10360177 DOI: 10.1016/S1097-2765(00)80354-8 |
0.665 |
|
| 1999 |
Churchill JJ, Anderson DG, Kowalczykowski SC. The RecBC enzyme loads RecA protein onto ssDNA asymmetrically and independently of chi, resulting in constitutive recombination activation. Genes & Development. 13: 901-11. PMID 10197989 DOI: 10.1101/Gad.13.7.901 |
0.632 |
|
| 1999 |
Zaitsev EN, Kowalczykowski SC. The simultaneous binding of two double-stranded DNA molecules by Escherichia coli RecA protein. Journal of Molecular Biology. 287: 21-31. PMID 10074404 DOI: 10.1006/Jmbi.1998.2580 |
0.639 |
|
| 1999 |
Zaitseva EM, Zaitsev EN, Kowalczykowski SC. The DNA binding properties of Saccharomyces cerevisiae Rad51 protein. The Journal of Biological Chemistry. 274: 2907-15. PMID 9915828 DOI: 10.1074/Jbc.274.5.2907 |
0.702 |
|
| 1998 |
Ponomarenko MP, Ponomarenko IuV, Titov II, Kolchanov NA, Mazin AV, Kowalczykowski SC. [Preference of RecA-filament to the DNA sequences correlates with genetic code]. Doklady Akademii Nauk / [RossiĭSkaia Akademii Nauk]. 363: 122-5. PMID 9891200 |
0.639 |
|
| 1998 |
Anderson DG, Kowalczykowski SC. Reconstitution of an SOS response pathway: derepression of transcription in response to DNA breaks. Cell. 95: 975-9. PMID 9875851 DOI: 10.1016/S0092-8674(00)81721-3 |
0.677 |
|
| 1998 |
Rehrauer WM, Bruck I, Woodgate R, Goodman MF, Kowalczykowski SC. Modulation of RecA nucleoprotein function by the mutagenic UmuD'C protein complex. The Journal of Biological Chemistry. 273: 32384-7. PMID 9829966 DOI: 10.1074/Jbc.273.49.32384 |
0.582 |
|
| 1998 |
Zaitsev EN, Kowalczykowski SC. Essential monomer-monomer contacts define the minimal length for the N-terminus of RecA protein. Molecular Microbiology. 29: 1317-8. PMID 9767598 DOI: 10.1046/J.1365-2958.1998.01006.X |
0.357 |
|
| 1998 |
Chédin F, Seitz EM, Kowalczykowski SC. Novel homologs of replication protein A in archaea: implications for the evolution of ssDNA-binding proteins. Trends in Biochemical Sciences. 23: 273-7. PMID 9757822 DOI: 10.1016/S0968-0004(98)01243-2 |
0.844 |
|
| 1998 |
Anderson DG, Kowalczykowski SC. SSB protein controls RecBCD enzyme nuclease activity during unwinding: a new role for looped intermediates. Journal of Molecular Biology. 282: 275-85. PMID 9735287 DOI: 10.1006/Jmbi.1998.2013 |
0.629 |
|
| 1998 |
Arnold DA, Bianco PR, Kowalczykowski SC. The reduced levels of chi recognition exhibited by the RecBC1004D enzyme reflect its recombination defect in vivo. The Journal of Biological Chemistry. 273: 16476-86. PMID 9632715 DOI: 10.1074/Jbc.273.26.16476 |
0.496 |
|
| 1998 |
Bianco PR, Tracy RB, Kowalczykowski SC. DNA strand exchange proteins: a biochemical and physical comparison. Frontiers in Bioscience : a Journal and Virtual Library. 3: D570-603. PMID 9632377 DOI: 10.2741/A304 |
0.697 |
|
| 1998 |
Sugiyama T, New JH, Kowalczykowski SC. DNA annealing by RAD52 protein is stimulated by specific interaction with the complex of replication protein A and single-stranded DNA. Proceedings of the National Academy of Sciences of the United States of America. 95: 6049-54. PMID 9600915 DOI: 10.1073/Pnas.95.11.6049 |
0.72 |
|
| 1998 |
Seitz EM, Brockman JP, Sandler SJ, Clark AJ, Kowalczykowski SC. RadA protein is an archaeal RecA protein homolog that catalyzes DNA strand exchange. Genes & Development. 12: 1248-53. PMID 9573041 DOI: 10.1101/Gad.12.9.1248 |
0.877 |
|
| 1998 |
Harmon FG, Kowalczykowski SC. RecQ helicase, in concert with RecA and SSB proteins, initiates and disrupts DNA recombination. Genes & Development. 12: 1134-44. PMID 9553043 DOI: 10.1101/Gad.12.8.1134 |
0.69 |
|
| 1998 |
Mazin AV, Kowalczykowski SC. The function of the secondary DNA-binding site of RecA protein during DNA strand exchange. The Embo Journal. 17: 1161-8. PMID 9463393 DOI: 10.1093/Emboj/17.4.1161 |
0.804 |
|
| 1998 |
New JH, Sugiyama T, Zaitseva E, Kowalczykowski SC. Rad52 protein stimulates DNA strand exchange by Rad51 and replication protein A. Nature. 391: 407-10. PMID 9450760 DOI: 10.1038/34950 |
0.681 |
|
| 1998 |
Zaitsev EN, Kowalczykowski SC. Binding of double-stranded DNA by Escherichia coli RecA protein monitored by a fluorescent dye displacement assay. Nucleic Acids Research. 26: 650-4. PMID 9421529 DOI: 10.1093/Nar/26.2.650 |
0.651 |
|
| 1997 |
Tracy RB, Baumohl JK, Kowalczykowski SC. The preference for GT-rich DNA by the yeast Rad51 protein defines a set of universal pairing sequences. Genes & Development. 11: 3423-31. PMID 9407034 DOI: 10.1101/Gad.11.24.3423 |
0.696 |
|
| 1997 |
Tracy RB, Chédin F, Kowalczykowski SC. The recombination hot spot chi is embedded within islands of preferred DNA pairing sequences in the E. coli genome. Cell. 90: 205-6. PMID 9244294 DOI: 10.1016/S0092-8674(00)80328-1 |
0.483 |
|
| 1997 |
Anderson DG, Kowalczykowski SC. The translocating RecBCD enzyme stimulates recombination by directing RecA protein onto ssDNA in a chi-regulated manner. Cell. 90: 77-86. PMID 9230304 DOI: 10.1016/S0092-8674(00)80315-3 |
0.693 |
|
| 1997 |
Bianco PR, Kowalczykowski SC. The recombination hotspot Chi is recognized by the translocating RecBCD enzyme as the single strand of DNA containing the sequence 5'-GCTGGTGG-3'. Proceedings of the National Academy of Sciences of the United States of America. 94: 6706-11. PMID 9192629 DOI: 10.1073/Pnas.94.13.6706 |
0.629 |
|
| 1997 |
Anderson DG, Churchill JJ, Kowalczykowski SC. Chi-activated RecBCD enzyme possesses 5'-->3' nucleolytic activity, but RecBC enzyme does not: evidence suggesting that the alteration induced by Chi is not simply ejection of the RecD subunit. Genes to Cells : Devoted to Molecular & Cellular Mechanisms. 2: 117-28. PMID 9167969 DOI: 10.1046/J.1365-2443.1997.1130311.X |
0.374 |
|
| 1997 |
Anderson DG, Kowalczykowski SC. The recombination hot spot chi is a regulatory element that switches the polarity of DNA degradation by the RecBCD enzyme. Genes & Development. 11: 571-81. PMID 9119222 DOI: 10.1101/Gad.11.5.571 |
0.467 |
|
| 1997 |
Sugiyama T, Zaitseva EM, Kowalczykowski SC. A single-stranded DNA-binding protein is needed for efficient presynaptic complex formation by the Saccharomyces cerevisiae Rad51 protein. The Journal of Biological Chemistry. 272: 7940-5. PMID 9065463 DOI: 10.1074/Jbc.272.12.7940 |
0.702 |
|
| 1996 |
Mazin AV, Kowalczykowski SC. The specificity of the secondary DNA binding site of RecA protein defines its role in DNA strand exchange. Proceedings of the National Academy of Sciences of the United States of America. 93: 10673-8. PMID 8855238 DOI: 10.1073/Pnas.93.20.10673 |
0.808 |
|
| 1996 |
Harmon FG, Rehrauer WM, Kowalczykowski SC. Interaction of Escherichia coli RecA protein with LexA repressor. II. Inhibition of DNA strand exchange by the uncleavable LexA S119A repressor argues that recombination and SOS induction are competitive processes Journal of Biological Chemistry. 271: 23874-23883. PMID 8798618 DOI: 10.1074/Jbc.271.39.23874 |
0.734 |
|
| 1996 |
Tracy RB, Kowalczykowski SC. In vitro selection of preferred DNA pairing sequences by the Escherichia coli RecA protein. Genes & Development. 10: 1890-903. PMID 8756347 DOI: 10.1101/Gad.10.15.1890 |
0.68 |
|
| 1996 |
Rehrauer WM, Kowalczykowski SC. The DNA binding site(s) of the Escherichia coli RecA protein. The Journal of Biological Chemistry. 271: 11996-2002. PMID 8662640 DOI: 10.1074/Jbc.271.20.11996 |
0.579 |
|
| 1996 |
Eggleston AK, Rahim NA, Kowalczykowski SC. A helicase assay based on the displacement of fluorescent, nucleic acid-binding ligands. Nucleic Acids Research. 24: 1179-86. PMID 8614617 DOI: 10.1093/Nar/24.7.1179 |
0.772 |
|
| 1995 |
Eggleston AK, O'Neill TE, Bradbury EM, Kowalczykowski SC. Unwinding of nucleosomal DNA by a DNA helicase. The Journal of Biological Chemistry. 270: 2024-31. PMID 7836428 DOI: 10.1074/Jbc.270.5.2024 |
0.806 |
|
| 1995 |
Kowalczykowski SC, Krupp RA. DNA-strand exchange promoted by RecA protein in the absence of ATP: implications for the mechanism of energy transduction in protein-promoted nucleic acid transactions. Proceedings of the National Academy of Sciences of the United States of America. 92: 3478-82. PMID 7724585 DOI: 10.1073/Pnas.92.8.3478 |
0.705 |
|
| 1995 |
Dixon DA, Kowalczykowski SC. Role of the Escherichia coli recombination hotspot, χ, in RecABCD-dependent homologous pairing Journal of Biological Chemistry. 270: 16360-16370. PMID 7608206 DOI: 10.1074/Jbc.270.27.16360 |
0.685 |
|
| 1994 |
Dixon DA, Churchill JJ, Kowalczykowski SC. Reversible inactivation of the Escherichia coli RecBCD enzyme by the recombination hotspot chi in vitro: evidence for functional inactivation or loss of the RecD subunit. Proceedings of the National Academy of Sciences of the United States of America. 91: 2980-4. PMID 8159691 DOI: 10.1073/Pnas.91.8.2980 |
0.538 |
|
| 1994 |
Kowalczykowski SC. In vitro reconstitution of homologous recombination reactions. Experientia. 50: 204-15. PMID 8143794 DOI: 10.1007/BF01924003 |
0.629 |
|
| 1994 |
Kowalczykowski SC, Eggleston AK. Homologous pairing and DNA strand-exchange proteins. Annual Review of Biochemistry. 63: 991-1043. PMID 7979259 DOI: 10.1146/Annurev.Bi.63.070194.005015 |
0.852 |
|
| 1994 |
Kowalczykowski SC, Dixon DA, Eggleston AK, Lauder SD, Rehrauer WM. Biochemistry of homologous recombination in Escherichia coli. Microbiological Reviews. 58: 401-65. PMID 7968921 DOI: 10.1128/Mmbr.58.3.401-465.1994 |
0.863 |
|
| 1993 |
Mitsis PG, Kowalczykowski SC, Lehman IR. A single-stranded DNA binding protein from Drosophila melanogaster: characterization of the heterotrimeric protein and its interaction with single-stranded DNA. Biochemistry. 32: 5257-66. PMID 8494903 DOI: 10.1021/Bi00070A038 |
0.612 |
|
| 1993 |
Eggleston AK, Kowalczykowski SC. The mutant recBCD enzyme, recB2109CD enzyme, has helicase activity but does not promote efficient joint molecule formation in vitro. Journal of Molecular Biology. 231: 621-33. PMID 8390578 DOI: 10.1006/Jmbi.1993.1314 |
0.731 |
|
| 1993 |
Eggleston AK, Kowalczykowski SC. Biochemical characterization of a mutant recBCD enzyme, the recB2109CD enzyme, which lacks chi-specific, but not non-specific, nuclease activity. Journal of Molecular Biology. 231: 605-20. PMID 8390577 DOI: 10.1006/Jmbi.1993.1313 |
0.696 |
|
| 1993 |
Dixon DA, Kowalczykowski SC. The recombination hotspot χ is a regulatory sequence that acts by attenuating the nuclease activity of the E. coli RecBCD enzyme Cell. 73: 87-96. PMID 8384931 DOI: 10.1016/0092-8674(93)90162-J |
0.521 |
|
| 1993 |
Allen MJ, Dong XF, O'Neill TE, Yau P, Kowalczykowski SC, Gatewood J, Balhorn R, Bradbury EM. Atomic force microscope measurements of nucleosome cores assembled along defined DNA sequences. Biochemistry. 32: 8390-6. PMID 8357790 DOI: 10.1021/Bi00084A002 |
0.463 |
|
| 1993 |
Lauder SD, Kowalczykowski SC. Negative co-dominant inhibition of recA protein function. Biochemical properties of the recA1, recA13 and recA56 proteins and the effect of recA56 protein on the activities of the wild-type recA protein function in vitro. Journal of Molecular Biology. 234: 72-86. PMID 8230208 DOI: 10.1006/Jmbi.1993.1564 |
0.56 |
|
| 1992 |
Madiraju MV, Lavery PE, Kowalczykowski SC, Clark AJ. Enzymatic properties of the RecA803 protein, a partial suppressor of recF mutations. Biochemistry. 31: 10529-35. PMID 1420169 DOI: 10.1021/Bi00158A016 |
0.662 |
|
| 1992 |
Roman LJ, Eggleston AK, Kowalczykowski SC. Processivity of the DNA helicase activity of Escherichia coli recBCD enzyme. The Journal of Biological Chemistry. 267: 4207-14. PMID 1310990 |
0.765 |
|
| 1991 |
Roman LJ, Dixon DA, Kowalczykowski SC. RecBCD-dependent joint molecule formation promoted by the Escherichia coli RecA and SSB proteins Proceedings of the National Academy of Sciences of the United States of America. 88: 3367-3371. PMID 2014257 DOI: 10.1073/Pnas.88.8.3367 |
0.695 |
|
| 1991 |
Kowalczykowski SC. Biochemical and biological function of Escherichia coli RecA protein: behavior of mutant RecA proteins. Biochimie. 73: 289-304. PMID 1883888 DOI: 10.1016/0300-9084(91)90216-N |
0.638 |
|
| 1991 |
Dixon DA, Kowalczykowski SC. Homologous pairing in vitro stimulated by the recombination Hotspot, Chi Cell. 66: 361-371. PMID 1855256 DOI: 10.1016/0092-8674(91)90625-9 |
0.55 |
|
| 1991 |
Kowalczykowski SC. Biochemistry of genetic recombination: energetics and mechanism of DNA strand exchange. Annual Review of Biophysics and Biophysical Chemistry. 20: 539-75. PMID 1831022 DOI: 10.1146/annurev.bb.20.060191.002543 |
0.51 |
|
| 1991 |
Eggleston AK, Kowalczykowski SC. An overview of homologous pairing and DNA strand exchange proteins. Biochimie. 73: 163-76. PMID 1653031 DOI: 10.1016/0300-9084(91)90199-B |
0.829 |
|
| 1990 |
Menetski JP, Bear DG, Kowalczykowski SC. Stable DNA heteroduplex formation catalyzed by the Escherichia coli RecA protein in the absence of ATP hydrolysis. Proceedings of the National Academy of Sciences of the United States of America. 87: 21-5. PMID 2404275 DOI: 10.1073/Pnas.87.1.21 |
0.852 |
|
| 1990 |
Menetski JP, Kowalczykowski SC. Biochemical properties of the Escherichia coli recA430 protein. Analysis of a mutation that affects the interaction of the ATP-recA protein complex with single-stranded DNA. Journal of Molecular Biology. 211: 845-55. PMID 2179566 DOI: 10.1016/0022-2836(90)90078-Z |
0.607 |
|
| 1989 |
Lavery PE, Kowalczykowski SC. Biochemical basis of the temperature-inducible constitutive protease activity of the RecA441 protein of Escherichia coli. Journal of Molecular Biology. 203: 861-74. PMID 2974887 DOI: 10.1016/0022-2836(88)90112-X |
0.572 |
|
| 1989 |
Menetski JP, Kowalczykowski SC. Enhancement of Escherichia coli RecA protein enzymatic function by dATP. Biochemistry. 28: 5871-81. PMID 2673351 DOI: 10.1021/Bi00440A025 |
0.575 |
|
| 1989 |
Roman LJ, Kowalczykowski SC. Characterization of the adenosinetriphosphatase activity of the Escherichia coli recBCD enzyme: Relationship of ATP hydrolysis to the unwinding of duplex DNA Biochemistry. 28: 2873-2881. PMID 2545239 DOI: 10.1021/Bi00433A019 |
0.506 |
|
| 1989 |
Roman LJ, Kowalczykowski SC. Characterization of the helicase activity of the Escherichia coli RecBCD enzyme using a novel helicase assay. Biochemistry. 28: 2863-73. PMID 2545238 DOI: 10.1021/Bi00433A018 |
0.478 |
|
| 1989 |
Kowalczykowski SC, Krupp RA. Biochemical events essential to the recombination activity of Escherichia coli RecA protein. II. Co-dominant effects of RecA142 protein on wild-type RecA protein function. Journal of Molecular Biology. 207: 735-47. PMID 2527304 DOI: 10.1016/0022-2836(89)90240-4 |
0.67 |
|
| 1989 |
Kowalczykowski SC, Burk DL, Krupp RA. Biochemical events essential to the recombination activity of Escherichia coli RecA protein. I. Properties of the mutant RecA142 protein. Journal of Molecular Biology. 207: 719-33. PMID 2527303 DOI: 10.1016/0022-2836(89)90239-8 |
0.661 |
|
| 1988 |
Menetski JP, Varghese A, Kowalczykowski SC. Properties of the high-affinity single-stranded DNA binding state of the Escherichia coli recA protein. Biochemistry. 27: 1205-12. PMID 3284580 DOI: 10.1021/Bi00404A021 |
0.528 |
|
| 1987 |
Kowalczykowski SC. Interaction of recA protein with a photoaffinity analogue of ATP, 8-azido-ATP: determination of nucleotide cofactor binding parameters and of the relationship between ATP binding and ATP hydrolysis. Biochemistry. 25: 5872-81. PMID 3539181 DOI: 10.1021/Bi00368A006 |
0.541 |
|
| 1987 |
Kowalczykowski SC, Clow J, Somani R, Varghese A. Effects of the Escherichia coli SSB protein on the binding of Escherichia coli RecA protein to single-stranded DNA. Demonstration of competitive binding and the lack of a specific protein-protein interaction. Journal of Molecular Biology. 193: 81-95. PMID 3295259 DOI: 10.1016/0022-2836(87)90629-2 |
0.72 |
|
| 1987 |
Kowalczykowski SC, Clow J, Krupp RA. Properties of the duplex DNA-dependent ATPase activity of Escherichia coli RecA protein and its role in branch migration. Proceedings of the National Academy of Sciences of the United States of America. 84: 3127-31. PMID 3033635 DOI: 10.1073/Pnas.84.10.3127 |
0.578 |
|
| 1987 |
Kowalczykowski SC, Krupp RA. Effects of Escherichia coli SSB protein on the single-stranded DNA-dependent ATPase activity of Escherichia coli RecA protein. Evidence that SSB protein facilitates the binding of RecA protein to regions of secondary structure within single-stranded DNA. Journal of Molecular Biology. 193: 97-113. PMID 2953903 DOI: 10.1016/0022-2836(87)90630-9 |
0.71 |
|
| 1987 |
Roman LJ, Kowalczykowski SC. Relationship of the physical and enzymatic properties of Escherichia coli recA protein to its strand exchange activity. Biochemistry. 25: 7375-85. PMID 2948558 DOI: 10.1021/Bi00371A020 |
0.679 |
|
| 1987 |
Kowalczykowski SC. Mechanistic aspects of the DNA strand exchange activity of E. coli recA protein Trends in Biochemical Sciences. 12: 141-145. DOI: 10.1016/0968-0004(87)90070-3 |
0.705 |
|
| 1986 |
Kowalczykowski SC, Paul LS, Lonberg N, Newport JW, McSwiggen JA, von Hippel PH. Cooperative and noncooperative binding of protein ligands to nucleic acid lattices: experimental approaches to the determination of thermodynamic parameters. Biochemistry. 25: 1226-40. PMID 3486003 DOI: 10.1021/Bi00354A006 |
0.737 |
|
| 1985 |
Menetski JP, Kowalczykowski SC. Interaction of recA protein with single-stranded DNA. Quantitative aspects of binding affinity modulation by nucleotide cofactors. Journal of Molecular Biology. 181: 281-95. PMID 3981638 DOI: 10.1016/0022-2836(85)90092-0 |
0.679 |
|
| 1982 |
von Hippel PH, Kowalczykowski SC, Lonberg N, Newport JW, Paul LS, Stormo GD, Gold L. Autoregulation of gene expression. Quantitative evaluation of the expression and function of the bacteriophage T4 gene 32 (single-stranded DNA binding) protein system. Journal of Molecular Biology. 162: 795-818. PMID 6984860 DOI: 10.1016/0022-2836(82)90548-4 |
0.799 |
|
| 1981 |
Kowalczykowski SC, Lonberg N, Newport JW, von Hippel PH. Interactions of bacteriophage T4-coded gene 32 protein with nucleic acids. I. Characterization of the binding interactions. Journal of Molecular Biology. 145: 75-104. PMID 7265204 DOI: 10.1016/0022-2836(81)90335-1 |
0.743 |
|
| 1981 |
Newport JW, Lonberg N, Kowalczykowski SC, von Hippel PH. Interactions of bacteriophage T4-coded gene 32 protein with nucleic acids. II. Specificity of binding to DNA and RNA. Journal of Molecular Biology. 145: 105-21. PMID 7265197 DOI: 10.1016/0022-2836(81)90336-3 |
0.758 |
|
| 1981 |
Lonberg N, Kowalczykowski SC, Paul LS, von Hippel PH. Interactions of bacteriophage T4-coded gene 32 protein with nucleic acids. III. Binding properties of two specific proteolytic digestion products of the protein (G32P*I and G32P*III). Journal of Molecular Biology. 145: 123-38. PMID 6455528 DOI: 10.1016/0022-2836(81)90337-5 |
0.669 |
|
| 1981 |
Lohman TM, Kowalczykowski SC. Kinetics and mechanism of the association of the bacteriophage T4 gene 32 (helix destabilizing) protein with single-stranded nucleic acids. Evidence for protein translocation Journal of Molecular Biology. 152: 67-109. PMID 6279865 DOI: 10.1016/0022-2836(81)90096-6 |
0.451 |
|
| 1981 |
Kowalczykowski SC, Bear DG, Von Hippel PH. 21 Single-Stranded DNA Binding Proteins Enzymes. 14: 373-444. DOI: 10.1016/S1874-6047(08)60347-9 |
0.89 |
|
| 1980 |
Kowalczykowski SC, Lonberg N, Newport JW, Paul LS, von Hippel PH. On the thermodynamics and kinetics of the cooperative binding of bacteriophage T4-coded gene 32 (helix destabilizing) protein to nucleic acid lattices. Biophysical Journal. 32: 403-18. PMID 6264988 DOI: 10.1016/S0006-3495(80)84964-2 |
0.745 |
|
| 1977 |
Kowalczykowski S, Steinhardt J. Kinetics of hemoglobin S gelation followed by continuously sensitive low-shear viscosity. Journal of Molecular Biology. 115: 201-13. PMID 592363 DOI: 10.1016/0022-2836(77)90097-3 |
0.538 |
|
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