Anna E. Edlund - Publications

Affiliations: 
J. Craig Venter Institute, San Diego, CA, United States 

40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Walker M, Uranga C, Levy SH, Kelly C, Edlund A. Thrombus-associated microbiota in acute ischemic stroke patients. Surgical Neurology International. 13: 247. PMID 35855159 DOI: 10.25259/SNI_104_2022  0.753
2022 Baker JL, Tang X, LaBonte S, Uranga C, Edlund A. and Modulate Production of Mutanocyclin and Reutericyclins in Streptococcus mutans B04Sm5. Journal of Bacteriology. e0004222. PMID 35404110 DOI: 10.1128/jb.00042-22  0.76
2021 Uranga C, Nelson KE, Edlund A, Baker JL. Tetramic Acids Mutanocyclin and Reutericyclin A, Produced by Strain B04Sm5 Modulate the Ecology of an Oral Biofilm. Frontiers in Oral Health. 2: 796140. PMID 35048077 DOI: 10.3389/froh.2021.796140  0.8
2021 Silveira CB, Cobián-Güemes AG, Uranga C, Baker JL, Edlund A, Rohwer F, Conrad D. Multi-Omics Study of Keystone Species in a Cystic Fibrosis Microbiome. International Journal of Molecular Sciences. 22. PMID 34769481 DOI: 10.3390/ijms222112050  0.778
2021 Baker JL, Edlund A. Identification of Oral Bacterial Biosynthetic Gene Clusters Associated with Caries. Methods in Molecular Biology (Clifton, N.J.). 2327: 161-189. PMID 34410645 DOI: 10.1007/978-1-0716-1518-8_10  0.805
2021 Schorn MA, Verhoeven S, Ridder L, Huber F, Acharya DD, Aksenov AA, Aleti G, Moghaddam JA, Aron AT, Aziz S, Bauermeister A, Bauman KD, Baunach M, Beemelmanns C, Beman JM, ... ... Edlund A, et al. A community resource for paired genomic and metabolomic data mining. Nature Chemical Biology. PMID 33589842 DOI: 10.1038/s41589-020-00724-z  0.775
2020 Baker JL, Morton JT, Dinis M, Alvarez R, Tran NC, Knight R, Edlund A. Deep metagenomics examines the oral microbiome during dental caries, revealing novel taxa and co-occurrences with host molecules. Genome Research. PMID 33239396 DOI: 10.1101/gr.265645.120  0.809
2020 Baker JL, Edlund A. Composite Long- and Short-Read Sequencing Delivers a Complete Genome Sequence of B04Sm5, a Reutericyclin- and Mutanocyclin-Producing Strain of Streptococcus mutans. Microbiology Resource Announcements. 9. PMID 33214302 DOI: 10.1128/MRA.01067-20  0.791
2020 Uranga CC, Arroyo P, Duggan BM, Gerwick WH, Edlund A. Commensal Oral Rothia mucilaginosa Produces Enterobactin, a Metal-Chelating Siderophore. Msystems. 5. PMID 32345739 DOI: 10.1128/mSystems.00161-20  0.828
2020 Momeni SS, Beno SM, Baker JL, Edlund A, Ghazal T, Childers NK, Wu H. Caries-Associated Biosynthetic Gene Clusters in . Journal of Dental Research. 22034520914519. PMID 32298190 DOI: 10.1177/0022034520914519  0.813
2020 Tang X, Kudo Y, Baker J, LaBonte S, Jordan P, McKinnie S, Guo J, Huan T, Moore BS, Edlund A. Cariogenic produces tetramic acid strain-specific antibiotics that impair commensal colonization. Acs Infectious Diseases. PMID 31906623 DOI: 10.1021/Acsinfecdis.9B00365  0.802
2019 Morton JT, Marotz C, Washburne A, Silverman J, Zaramela LS, Edlund A, Zengler K, Knight R. Establishing microbial composition measurement standards with reference frames. Nature Communications. 10: 2719. PMID 31222023 DOI: 10.1038/S41467-019-10656-5  0.38
2019 Aleti G, Baker JL, Tang X, Alvarez R, Dinis M, Tran NC, Melnik AV, Zhong C, Ernst M, Dorrestein PC, Edlund A. Identification of the Bacterial Biosynthetic Gene Clusters of the Oral Microbiome Illuminates the Unexplored Social Language of Bacteria during Health and Disease. Mbio. 10. PMID 30992349 DOI: 10.1128/Mbio.00321-19  0.812
2019 Baker JL, Hendrickson EL, Tang X, Lux R, He X, Edlund A, McLean JS, Shi W. and emerge as lone survivors following long-term starvation of oral microbiota. Proceedings of the National Academy of Sciences of the United States of America. PMID 30975748 DOI: 10.1073/Pnas.1820594116  0.78
2018 Baker JL, Edlund A. Exploiting the Oral Microbiome to Prevent Tooth Decay: Has Evolution Already Provided the Best Tools? Frontiers in Microbiology. 9: 3323. PMID 30687294 DOI: 10.3389/Fmicb.2018.03323  0.8
2018 Edlund A, Yang Y, Yooseph S, He X, Shi W, McLean JS. Uncovering complex microbiome activities via metatranscriptomics during 24 hours of oral biofilm assembly and maturation. Microbiome. 6: 217. PMID 30522530 DOI: 10.1186/S40168-018-0591-4  0.769
2018 Bedree JK, Bor B, Cen L, Edlund A, Lux R, McLean JS, Shi W, He X. Quorum Sensing Modulates the Epibiotic-Parasitic Relationship Between and Its Saccharibacteria epibiont, a Strain, TM7x. Frontiers in Microbiology. 9: 2049. PMID 30319555 DOI: 10.3389/Fmicb.2018.02049  0.768
2018 Torres PJ, Thompson J, McLean JS, Kelley ST, Edlund A. Discovery of a Novel Periodontal Disease-Associated Bacterium. Microbial Ecology. PMID 29860637 DOI: 10.1007/S00248-018-1200-6  0.689
2017 Edlund A, Garg N, Mohimani H, Gurevich A, He X, Shi W, Dorrestein PC, McLean JS. Metabolic Fingerprints from the Human Oral Microbiome Reveal a Vast Knowledge Gap of Secreted Small Peptidic Molecules. Msystems. 2. PMID 28761934 DOI: 10.1128/mSystems.00058-17  0.802
2016 Shi B, Wu T, McLean J, Edlund A, Young Y, He X, Lv H, Zhou X, Shi W, Li H, Lux R. The Denture-Associated Oral Microbiome in Health and Stomatitis. Msphere. 1. PMID 28066812 DOI: 10.1128/mSphere.00215-16  0.748
2016 Garg N, Zeng Y, Edlund A, Melnik AV, Sanchez LM, Mohimani H, Gurevich A, Miao V, Schiffler S, Lim YW, Luzzatto-Knaan T, Cai S, Rohwer F, Pevzner PA, Cichewicz RH, et al. Spatial Molecular Architecture of the Microbial Community of a Peltigera Lichen. Msystems. 1. PMID 28028548 DOI: 10.1128/mSystems.00139-16  0.681
2016 Wang M, Carver JJ, Phelan VV, Sanchez LM, Garg N, Peng Y, Nguyen DD, Watrous J, Kapono CA, Luzzatto-Knaan T, Porto C, Bouslimani A, Melnik AV, Meehan MJ, Liu WT, ... ... Edlund A, et al. Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking. Nature Biotechnology. 34: 828-837. PMID 27504778 DOI: 10.1038/Nbt.3597  0.732
2016 Zhong C, Edlund A, Yang Y, McLean JS, Yooseph S. Metagenome and Metatranscriptome Analyses Using Protein Family Profiles. Plos Computational Biology. 12: e1004991. PMID 27400380 DOI: 10.1371/Journal.Pcbi.1004991  0.645
2016 Edlund A, Liu Q, Watling M, To TT, Bumgarner RE, He X, Shi W, McLean JS. High-Quality Draft Genome Sequence of Low-pH-Active Veillonella parvula Strain SHI-1, Isolated from Human Saliva within an In Vitro Oral Biofilm Model. Genome Announcements. 4. PMID 26893419 DOI: 10.1128/Genomea.01684-15  0.752
2015 McLean JS, Liu Q, Thompson J, Edlund A, Kelley S. Draft Genome Sequence of "Candidatus Bacteroides periocalifornicus," a New Member of the Bacteriodetes Phylum Found within the Oral Microbiome of Periodontitis Patients. Genome Announcements. 3. PMID 26701081 DOI: 10.1128/Genomea.01485-15  0.647
2015 Edlund A, Yang Y, Yooseph S, Hall AP, Nguyen DD, Dorrestein PC, Nelson KE, He X, Lux R, Shi W, McLean JS. Meta-omics uncover temporal regulation of pathways across oral microbiome genera during in vitro sugar metabolism. The Isme Journal. PMID 26023872 DOI: 10.1038/Ismej.2015.72  0.777
2015 Edlund A, Santiago-Rodriguez TM, Boehm TK, Pride DT. Bacteriophage and their potential roles in the human oral cavity. Journal of Oral Microbiology. 7: 27423. PMID 25861745 DOI: 10.3402/Jom.V7.27423  0.494
2015 Gorokhova E, Rivetti C, Furuhagen S, Edlund A, Ek K, Breitholtz M. Bacteria-Mediated Effects of Antibiotics on Daphnia Nutrition Environmental Science & Technology. 49: 5779-5787. PMID 25850437 DOI: 10.1021/Acs.Est.5B00833  0.36
2015 He X, McLean JS, Edlund A, Yooseph S, Hall AP, Liu SY, Dorrestein PC, Esquenazi E, Hunter RC, Cheng G, Nelson KE, Lux R, Shi W. Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle. Proceedings of the National Academy of Sciences of the United States of America. 112: 244-9. PMID 25535390 DOI: 10.1073/Pnas.1419038112  0.796
2013 Edlund A, Yang Y, Hall AP, Guo L, Lux R, He X, Nelson KE, Nealson KH, Yooseph S, Shi W, McLean JS. An in vitro biofilm model system maintaining a highly reproducible species and metabolic diversity approaching that of the human oral microbiome. Microbiome. 1: 25. PMID 24451062 DOI: 10.1186/2049-2618-1-25  0.774
2013 McLean JS, Lombardo MJ, Badger JH, Edlund A, Novotny M, Yee-Greenbaum J, Vyahhi N, Hall AP, Yang Y, Dupont CL, Ziegler MG, Chitsaz H, Allen AE, Yooseph S, Tesler G, et al. Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum. Proceedings of the National Academy of Sciences of the United States of America. 110: E2390-9. PMID 23754396 DOI: 10.1073/Pnas.1219809110  0.665
2013 McLean JS, Lombardo MJ, Ziegler MG, Novotny M, Yee-Greenbaum J, Badger JH, Tesler G, Nurk S, Lesin V, Brami D, Hall AP, Edlund A, Allen LZ, Durkin S, Reed S, et al. Genome of the pathogen Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform. Genome Research. 23: 867-77. PMID 23564253 DOI: 10.1101/Gr.150433.112  0.694
2012 Gonzalez DJ, Xu Y, Yang YL, Esquenazi E, Liu WT, Edlund A, Duong T, Du L, Molnár I, Gerwick WH, Jensen PR, Fischbach M, Liaw CC, Straight P, Nizet V, et al. Observing the invisible through imaging mass spectrometry, a window into the metabolic exchange patterns of microbes. Journal of Proteomics. 75: 5069-76. PMID 22641157 DOI: 10.1016/J.Jprot.2012.05.036  0.781
2012 Edlund A, Ek K, Breitholtz M, Gorokhova E. Antibiotic-Induced Change of Bacterial Communities Associated with the Copepod Nitocra spinipes Plos One. 7. PMID 22427962 DOI: 10.1371/Journal.Pone.0033107  0.423
2012 Freel KC, Edlund A, Jensen PR. Microdiversity and evidence for high dispersal rates in the marine actinomycete 'Salinispora pacifica'. Environmental Microbiology. 14: 480-93. PMID 22117917 DOI: 10.1111/J.1462-2920.2011.02641.X  0.767
2011 Edlund A, Loesgen S, Fenical W, Jensen PR. Geographic distribution of secondary metabolite genes in the marine actinomycete Salinispora arenicola. Applied and Environmental Microbiology. 77: 5916-25. PMID 21724881 DOI: 10.1128/Aem.00611-11  0.571
2008 Edlund A, Jansson JK. Use of bromodeoxyuridine immunocapture to identify psychrotolerant phenanthrene-degrading bacteria in phenanthrene-enriched polluted Baltic Sea sediments. Fems Microbiology Ecology. 65: 513-25. PMID 18616589 DOI: 10.1111/J.1574-6941.2008.00513.X  0.583
2008 Edlund A, Hårdeman F, Jansson JK, Sjöling S. Active bacterial community structure along vertical redox gradients in Baltic Sea sediment. Environmental Microbiology. 10: 2051-63. PMID 18452546 DOI: 10.1111/J.1462-2920.2008.01624.X  0.609
2006 Edlund A, Jansson JK. Changes in active bacterial communities before and after dredging of highly polluted Baltic Sea sediments. Applied and Environmental Microbiology. 72: 6800-7. PMID 16950911 DOI: 10.1128/Aem.00971-06  0.572
2006 Edlund A, Soule T, Sjöling S, Jansson JK. Microbial community structure in polluted Baltic Sea sediments. Environmental Microbiology. 8: 223-32. PMID 16423011 DOI: 10.1111/J.1462-2920.2005.00887.X  0.592
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