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Kar-Chun Tan - Publications

Affiliations: 
Curtin University, Bentley, Western Australia, Australia 
Area:
Molecular plant pathology
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45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Aboukhaddour R, Abdel-Fattah MH, McDonald M, Moffat C, Navathe S, Friesen TL, Strelkov SE, Oliver RP, Tan KC, Liu Z, Moolhuijzen P, Phan H, See PT, Solomon P. A revised nomenclature for ToxA haplotypes across multiple fungal species. Phytopathology. PMID 36809076 DOI: 10.1094/PHYTO-01-23-0017-SC  0.565
2022 Andronis CE, Jacques S, Lipscombe R, Tan KC. Comparative sub-cellular proteome analyses reveals metabolic differentiation and production of effector-like molecules in the dieback phytopathogen Phytophthora cinnamomi. Journal of Proteomics. 269: 104725. PMID 36096432 DOI: 10.1016/j.jprot.2022.104725  0.352
2022 John E, Singh KB, Oliver RP, Tan KC. Transcription factor lineages in plant-pathogenic fungi, connecting diversity with fungal virulence. Fungal Genetics and Biology : Fg & B. 103712. PMID 35667520 DOI: 10.1016/j.fgb.2022.103712  0.601
2022 John E, Jacques S, Phan HTT, Liu L, Pereira D, Croll D, Singh KB, Oliver RP, Tan KC. Variability in an effector gene promoter of a necrotrophic fungal pathogen dictates epistasis and effector-triggered susceptibility in wheat. Plos Pathogens. 18: e1010149. PMID 34990464 DOI: 10.1371/journal.ppat.1010149  0.584
2021 Andronis CE, Hane JK, Bringans S, Hardy GESJ, Jacques S, Lipscombe R, Tan KC. Gene Validation and Remodelling Using Proteogenomics of , the Causal Agent of Dieback. Frontiers in Microbiology. 12: 665396. PMID 34394023 DOI: 10.3389/fmicb.2021.665396  0.336
2021 Bertazzoni S, Jones DAB, Phan HT, Tan KC, Hane JK. Chromosome-level genome assembly and manually-curated proteome of model necrotroph Parastagonospora nodorum Sn15 reveals a genome-wide trove of candidate effector homologs, and redundancy of virulence-related functions within an accessory chromosome. Bmc Genomics. 22: 382. PMID 34034667 DOI: 10.1186/s12864-021-07699-8  0.305
2021 Phan HTT, Furuki E, Hunziker L, Rybak K, Tan KC. GWAS analysis reveals distinct pathogenicity profiles of Australian Parastagonospora nodorum isolates and identification of marker-trait-associations to septoria nodorum blotch. Scientific Reports. 11: 10085. PMID 33980869 DOI: 10.1038/s41598-021-87829-0  0.306
2021 John E, Singh KB, Oliver RP, Tan KC. Transcription factor control of virulence in phytopathogenic fungi. Molecular Plant Pathology. PMID 33973705 DOI: 10.1111/mpp.13056  0.572
2020 Downie RC, Lin M, Corsi B, Ficke A, Lillemo M, Oliver RP, Phan H, Tan KC, Cockram J. Septoria nodorum blotch of wheat: disease management and resistance breeding in the face of shifting disease dynamics and a changing environment. Phytopathology. PMID 33245254 DOI: 10.1094/PHYTO-07-20-0280-RVW  0.563
2020 Lin M, Corsi B, Ficke A, Tan KC, Cockram J, Lillemo M. Genetic mapping using a wheat multi-founder population reveals a locus on chromosome 2A controlling resistance to both leaf and glume blotch caused by the necrotrophic fungal pathogen Parastagonospora nodorum. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 31996971 DOI: 10.1007/S00122-019-03507-W  0.407
2019 Ruud AK, Dieseth JA, Ficke A, Furuki E, Phan HTT, Oliver RP, Tan KC, Lillemo M. Genome-Wide Association Mapping of Resistance to Septoria Nodorum Leaf Blotch in a Nordic Spring Wheat Collection. The Plant Genome. 12: 1-15. PMID 33016591 DOI: 10.3835/Plantgenome2018.12.0105  0.581
2019 Phan HTT, Jones DAB, Rybak K, Dodhia KN, Lopez-Ruiz FJ, Valade R, Gout L, Lebrun MH, Brunner PC, Oliver RP, Tan KC. Low Amplitude Boom-and-Bust Cycles Define the Septoria Nodorum Blotch Interaction. Frontiers in Plant Science. 10: 1785. PMID 32082346 DOI: 10.3389/Fpls.2019.01785  0.619
2019 Jones DAB, John E, Rybak K, Phan HTT, Singh KB, Lin SY, Solomon PS, Oliver RP, Tan KC. A specific fungal transcription factor controls effector gene expression and orchestrates the establishment of the necrotrophic pathogen lifestyle on wheat. Scientific Reports. 9: 15884. PMID 31685928 DOI: 10.1038/S41598-019-52444-7  0.651
2019 Ruud AK, Dieseth JA, Ficke A, Furuki E, Phan HTT, Oliver RP, Tan K, Lillemo M. Genome-Wide Association Mapping of Resistance to Septoria Nodorum Leaf Blotch in a Nordic Spring Wheat Collection The Plant Genome. 12: 180105. DOI: 10.3835/plantgenome2018.12.0105  0.503
2018 Syme RA, Tan KC, Rybak K, Friesen TL, McDonald BA, Oliver RP, Hane JK. Pan-Parastagonospora Comparative Genome Analysis - effector prediction and genome evolution. Genome Biology and Evolution. PMID 30184068 DOI: 10.1093/Gbe/Evy192  0.635
2018 Downie RC, Bouvet L, Furuki E, Gosman N, Gardner KA, Mackay IJ, Campos Mantello C, Mellers G, Phan HTT, Rose GA, Tan KC, Oliver RP, Cockram J. Assessing European Wheat Sensitivities to Necrotrophic Effectors and Fine-Mapping the Locus Conferring Sensitivity to the Effector SnTox3. Frontiers in Plant Science. 9: 881. PMID 30022985 DOI: 10.3389/Fpls.2018.00881  0.596
2018 Bertazzoni S, Williams A, Jones DAB, Syme RA, Tan KC, Hane JK. Accessories make the outfit: Accessory Chromosomes and other dispensable DNA regions in plant-pathogenic Fungi. Molecular Plant-Microbe Interactions : Mpmi. PMID 29664319 DOI: 10.1094/Mpmi-06-17-0135-Fi  0.441
2018 Phan HTT, Rybak K, Bertazzoni S, Furuki E, Dinglasan E, Hickey LT, Oliver RP, Tan KC. Novel sources of resistance to Septoria nodorum blotch in the Vavilov wheat collection identified by genome-wide association studies. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 29470621 DOI: 10.1007/S00122-018-3073-Y  0.655
2017 Tan KC, Oliver RP. Regulation of proteinaceous effector expression in phytopathogenic fungi. Plos Pathogens. 13: e1006241. PMID 28426760 DOI: 10.1371/Journal.Ppat.1006241  0.633
2016 Rybak K, See PT, Phan HT, Syme RA, Moffat CS, Oliver RP, Tan KC. A functionally conserved Zn2 Cys6 binuclear cluster transcription factor class regulates necrotrophic effector gene expression and host-specific virulence of two major Pleosporales fungal pathogens of wheat. Molecular Plant Pathology. PMID 27860150 DOI: 10.1111/Mpp.12511  0.654
2016 Phan HT, Rybak K, Furuki E, Breen S, Solomon PS, Oliver RP, Tan KC. Differential effector gene expression underpins epistasis in a plant fungal disease. The Plant Journal : For Cell and Molecular Biology. PMID 27133896 DOI: 10.1111/Tpj.13203  0.652
2016 John E, Lopez-Ruiz F, Rybak K, Mousley CJ, Oliver RP, Tan KC. Dissecting the role of histidine kinase and Hog1 mitogen-activated protein kinase signalling in stress tolerance and pathogenicity of Parastagonospora nodorum on wheat. Microbiology (Reading, England). PMID 26978567 DOI: 10.1099/Mic.0.000280  0.619
2016 Syme RA, Tan KC, Hane JK, Dodhia K, Stoll T, Hastie M, Furuki E, Ellwood SR, Williams AH, Tan YF, Testa AC, Gorman JJ, Oliver RP. Comprehensive Annotation of the Parastagonospora nodorum Reference Genome Using Next-Generation Genomics, Transcriptomics and Proteogenomics. Plos One. 11: e0147221. PMID 26840125 DOI: 10.1371/Journal.Pone.0147221  0.585
2015 Cockram J, Scuderi A, Barber T, Furuki E, Gardner KA, Gosman N, Kowalczyk R, Phan HP, Rose GA, Tan KC, Oliver RP, Mackay IJ. Fine-Mapping the Wheat Snn1 Locus Conferring Sensitivity to the Parastagonospora nodorum Necrotrophic Effector SnTox1 Using an Eight Founder Multiparent Advanced Generation Inter-Cross Population. G3 (Bethesda, Md.). PMID 26416667 DOI: 10.1534/G3.115.021584  0.605
2015 Tan KC, Phan HT, Rybak K, John E, Chooi YH, Solomon PS, Oliver RP. Functional redundancy of necrotrophic effectors - consequences for exploitation for breeding. Frontiers in Plant Science. 6: 501. PMID 26217355 DOI: 10.3389/Fpls.2015.00501  0.601
2015 Tucker MA, Moffat CS, Ellwood SR, Tan KC, Jayasena K, Oliver RP. Development of genetic SSR markers in Blumeria graminis f. sp. hordei and application to isolates from Australia Plant Pathology. 64: 337-343. DOI: 10.1111/Ppa.12258  0.552
2014 Oliver R, Lichtenzveig J, Tan K, Waters O, Rybak K, Lawrence J, Friesen T, Burgess P. Absence of detectable yield penalty associated with insensitivity to Pleosporales necrotrophic effectors in wheat grown in the West Australian wheat belt Plant Pathology. 63: 1027-1032. DOI: 10.1111/Ppa.12191  0.602
2014 Tan KC, Waters ODC, Rybak K, Antoni E, Furuki E, Oliver RP. Sensitivity to three Parastagonospora nodorum necrotrophic effectors in current Australian wheat cultivars and the presence of further fungal effectors Crop and Pasture Science. 65: 150-158. DOI: 10.1071/Cp13443  0.658
2012 Tan KC, Ferguson-Hunt M, Rybak K, Waters OD, Stanley WA, Bond CS, Stukenbrock EH, Friesen TL, Faris JD, McDonald BA, Oliver RP. Quantitative variation in effector activity of ToxA isoforms from Stagonospora nodorum and Pyrenophora tritici-repentis. Molecular Plant-Microbe Interactions : Mpmi. 25: 515-22. PMID 22250581 DOI: 10.1094/Mpmi-10-11-0273  0.578
2012 Vincent D, Tan KC, Cassidy L, Solomon PS, Oliver RP. Proteomic techniques for plant-fungal interactions. Methods in Molecular Biology (Clifton, N.J.). 835: 75-96. PMID 22183648 DOI: 10.1007/978-1-61779-501-5_5  0.603
2010 IpCho SV, Tan KC, Koh G, Gummer J, Oliver RP, Trengove RD, Solomon PS. The transcription factor StuA regulates central carbon metabolism, mycotoxin production, and effector gene expression in the wheat pathogen Stagonospora nodorum. Eukaryotic Cell. 9: 1100-8. PMID 20495056 DOI: 10.1128/Ec.00064-10  0.617
2010 Casey T, Solomon PS, Bringans S, Tan KC, Oliver RP, Lipscombe R. Quantitative proteomic analysis of G-protein signalling in Stagonospora nodorum using isobaric tags for relative and absolute quantification. Proteomics. 10: 38-47. PMID 19882661 DOI: 10.1002/Pmic.200900474  0.595
2010 Tan K, Oliver RP, Solomon PS, Moffat CS. Proteinaceous necrotrophic effectors in fungal virulence Functional Plant Biology. 37: 907. DOI: 10.1071/Fp10067  0.63
2009 Liu Z, Faris JD, Oliver RP, Tan KC, Solomon PS, McDonald MC, McDonald BA, Nunez A, Lu S, Rasmussen JB, Friesen TL. SnTox3 acts in effector triggered susceptibility to induce disease on wheat carrying the Snn3 gene. Plos Pathogens. 5: e1000581. PMID 19806176 DOI: 10.1371/Journal.Ppat.1000581  0.64
2009 Bringans S, Hane JK, Casey T, Tan KC, Lipscombe R, Solomon PS, Oliver RP. Deep proteogenomics; high throughput gene validation by multidimensional liquid chromatography and mass spectrometry of proteins from the fungal wheat pathogen Stagonospora nodorum. Bmc Bioinformatics. 10: 301. PMID 19772613 DOI: 10.1186/1471-2105-10-301  0.623
2009 Tan KC, Ipcho SV, Trengove RD, Oliver RP, Solomon PS. Assessing the impact of transcriptomics, proteomics and metabolomics on fungal phytopathology. Molecular Plant Pathology. 10: 703-15. PMID 19694958 DOI: 10.1111/J.1364-3703.2009.00565.X  0.589
2009 Tan KC, Heazlewood JL, Millar AH, Oliver RP, Solomon PS. Proteomic identification of extracellular proteins regulated by the Gna1 Galpha subunit in Stagonospora nodorum. Mycological Research. 113: 523-31. PMID 19284980 DOI: 10.1016/J.Mycres.2009.01.004  0.642
2009 Tan K, Trengove RD, Maker GL, Oliver RP, Solomon PS. Metabolite profiling identifies the mycotoxin alternariol in the pathogen Stagonospora nodorum Metabolomics. 5: 330-335. DOI: 10.1007/S11306-009-0158-2  0.556
2008 Tan KC, Heazlewood JL, Millar AH, Thomson G, Oliver RP, Solomon PS. A signaling-regulated, short-chain dehydrogenase of Stagonospora nodorum regulates asexual development. Eukaryotic Cell. 7: 1916-29. PMID 18776038 DOI: 10.1128/Ec.00237-08  0.615
2008 Solomon PS, Ipcho SV, Hane JK, Tan K, Oliver RP. A quantitative PCR approach to determine gene copy number Fungal Genetics Reports. 55: 5-8. DOI: 10.4148/1941-4765.1082  0.583
2007 Hane JK, Lowe RG, Solomon PS, Tan KC, Schoch CL, Spatafora JW, Crous PW, Kodira C, Birren BW, Galagan JE, Torriani SF, McDonald BA, Oliver RP. Dothideomycete plant interactions illuminated by genome sequencing and EST analysis of the wheat pathogen Stagonospora nodorum. The Plant Cell. 19: 3347-68. PMID 18024570 DOI: 10.1105/Tpc.107.052829  0.651
2006 Solomon PS, Lowe RG, Tan KC, Waters OD, Oliver RP. Stagonospora nodorum: cause of stagonospora nodorum blotch of wheat. Molecular Plant Pathology. 7: 147-56. PMID 20507435 DOI: 10.1111/J.1364-3703.2006.00326.X  0.573
2005 Solomon PS, Tan KC, Oliver RP. Mannitol 1-phosphate metabolism is required for sporulation in planta of the wheat pathogen Stagonospora nodorum. Molecular Plant-Microbe Interactions : Mpmi. 18: 110-5. PMID 15720079 DOI: 10.1094/Mpmi-18-0110  0.578
2004 Solomon PS, Tan KC, Sanchez P, Cooper RM, Oliver RP. The disruption of a Galpha subunit sheds new light on the pathogenicity of Stagonospora nodorum on wheat. Molecular Plant-Microbe Interactions : Mpmi. 17: 456-66. PMID 15141949 DOI: 10.1094/Mpmi.2004.17.5.456  0.627
2003 Solomon PS, Tan KC, Oliver RP. The nutrient supply of pathogenic fungi; a fertile field for study. Molecular Plant Pathology. 4: 203-10. PMID 20569380 DOI: 10.1046/J.1364-3703.2003.00161.X  0.607
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