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Year Citation  Score
2022 Eniwaye BP, Booth V, Hudetz AG, Zochowski M. Modeling cortical synaptic effects of anesthesia and their cholinergic reversal. Plos Computational Biology. 18: e1009743. PMID 35737717 DOI: 10.1371/journal.pcbi.1009743  0.32
2021 Czarnecki P, Lin J, Aton SJ, Zochowski M. Dynamical Mechanism Underlying Scale-Free Network Reorganization in Low Acetylcholine States Corresponding to Slow Wave Sleep. Frontiers in Network Physiology. 1. PMID 35785148 DOI: 10.3389/fnetp.2021.759131  0.34
2021 Skilling QM, Eniwaye B, Clawson BC, Shaver J, Ognjanovski N, Aton SJ, Zochowski M. Acetylcholine-gated current translates wake neuronal firing rate information into a spike timing-based code in Non-REM sleep, stabilizing neural network dynamics during memory consolidation. Plos Computational Biology. 17: e1009424. PMID 34543284 DOI: 10.1371/journal.pcbi.1009424  0.302
2020 Lu Y, Sarter M, Zochowski M, Booth V. Phasic cholinergic signaling promotes emergence of local gamma rhythms in excitatory-inhibitory networks. The European Journal of Neuroscience. PMID 32293081 DOI: 10.1111/ejn.14744  0.428
2020 Wu J, Aton S, Booth V, Zochowski M. Network and cellular mechanisms underlying heterogeneous excitatory/inhibitory balanced states. The European Journal of Neuroscience. PMID 31903627 DOI: 10.1111/Ejn.14669  0.457
2019 Roach JP, Eniwaye B, Booth V, Sander LM, Zochowski MR. Acetylcholine Mediates Dynamic Switching Between Information Coding Schemes in Neuronal Networks. Frontiers in Systems Neuroscience. 13: 64. PMID 31780905 DOI: 10.3389/Fnsys.2019.00064  0.458
2019 Budak M, Zochowski M. Synaptic Failure Differentially Affects Pattern Formation in Heterogenous Networks. Frontiers in Neural Circuits. 13: 31. PMID 31139055 DOI: 10.3389/fncir.2019.00031  0.451
2019 Puentes-Mestril C, Roach J, Niethard N, Zochowski M, Aton SJ. How rhythms of the sleeping brain tune memory and synaptic plasticity. Sleep. PMID 31100149 DOI: 10.1093/Sleep/Zsz095  0.321
2019 Skilling QM, Ognjanovski N, Aton SJ, Zochowski M. Critical Dynamics Mediate Learning of New Distributed Memory Representations in Neuronal Networks Entropy. 21: 1043. DOI: 10.3390/E21111043  0.438
2018 Ognjanovski N, Broussard C, Zochowski M, Aton SJ. Hippocampal Network Oscillations Rescue Memory Consolidation Deficits Caused by Sleep Loss. Cerebral Cortex (New York, N.Y. : 1991). PMID 30060138 DOI: 10.1093/Cercor/Bhy174  0.34
2018 Roach JP, Pidde A, Katz E, Wu J, Ognjanovski N, Aton SJ, Zochowski MR. Resonance with subthreshold oscillatory drive organizes activity and optimizes learning in neural networks. Proceedings of the National Academy of Sciences of the United States of America. PMID 29545273 DOI: 10.1073/Pnas.1716933115  0.408
2018 Rich S, Zochowski M, Booth V. Effects of Neuromodulation on Excitatory–Inhibitory Neural Network Dynamics Depend on Network Connectivity Structure Journal of Nonlinear Science. 30: 2171-2194. DOI: 10.1007/S00332-017-9438-6  0.473
2017 Rich S, Zochowski M, Booth V. Dichotomous Dynamics in E-I Networks with Strongly and Weakly Intra-connected Inhibitory Neurons. Frontiers in Neural Circuits. 11: 104. PMID 29326558 DOI: 10.3389/Fncir.2017.00104  0.472
2017 Wu J, Skilling QM, Maruyama D, Li C, Ognjanovski N, Aton S, Zochowski M. Functional Network Stability and Average Minimal Distance - A framework to rapidly assess dynamics of functional network representations. Journal of Neuroscience Methods. PMID 29294309 DOI: 10.1016/J.Jneumeth.2017.12.021  0.406
2017 Durkin J, Suresh AK, Colbath J, Broussard C, Wu J, Zochowski M, Aton SJ. Cortically coordinated NREM thalamocortical oscillations play an essential, instructive role in visual system plasticity. Proceedings of the National Academy of Sciences of the United States of America. PMID 28893999 DOI: 10.1073/Pnas.1710613114  0.348
2017 Ognjanovski N, Schaeffer S, Wu J, Mofakham S, Maruyama D, Zochowski M, Aton SJ. Erratum: Parvalbumin-expressing interneurons coordinate hippocampal network dynamics required for memory consolidation. Nature Communications. 8: 16120. PMID 28681846 DOI: 10.1038/ncomms16120  0.748
2017 Nowak A, Vallacher RR, Zochowski M, Rychwalska A. Functional Synchronization: The Emergence of Coordinated Activity in Human Systems. Frontiers in Psychology. 8: 945. PMID 28659842 DOI: 10.3389/Fpsyg.2017.00945  0.323
2017 Ognjanovski N, Schaeffer S, Wu J, Mofakham S, Maruyama D, Zochowski M, Aton SJ. Parvalbumin-expressing interneurons coordinate hippocampal network dynamics required for memory consolidation. Nature Communications. 8: 15039. PMID 28382952 DOI: 10.1038/Ncomms15039  0.766
2016 Shtrahman E, Maruyama D, Olariu E, Fink C, Zochowski M. Understanding spatial and temporal patterning of astrocyte calcium transients via interactions between network transport and extracellular diffusion. Physical Biology. PMID 28004641 DOI: 10.1088/1478-3975/aa5565  0.413
2016 Mofakham S, Fink CG, Booth V, Zochowski MR. Interplay between excitability type and distributions of neuronal connectivity determines neuronal network synchronization. Physical Review. E. 94: 042427. PMID 27841569 DOI: 10.1103/Physreve.94.042427  0.781
2016 Rich S, Booth V, Zochowski M. Intrinsic Cellular Properties and Connectivity Density Determine Variable Clustering Patterns in Randomly Connected Inhibitory Neural Networks. Frontiers in Neural Circuits. 10: 82. PMID 27812323 DOI: 10.3389/Fncir.2016.00082  0.508
2016 Sharpee TO, Destexhe A, Kawato M, Sekulić V, Skinner FK, Wójcik DK, Chintaluri C, Cserpán D, Somogyvári Z, Kim JK, Kilpatrick ZP, Bennett MR, Josić K, Elices I, Arroyo D, ... ... Zochowski MR, ... ... Zochowski M, et al. 25th Annual Computational Neuroscience Meeting: CNS-2016 Bmc Neuroscience. 17: 54. PMID 27534393 DOI: 10.1186/S12868-016-0283-6  0.685
2016 Knudstrup S, Zochowski M, Booth V. Network burst dynamics under heterogeneous cholinergic modulation of neural firing properties and heterogeneous synaptic connectivity. The European Journal of Neuroscience. PMID 26869313 DOI: 10.1111/Ejn.13210  0.491
2015 Roach JP, Ben-Jacob E, Sander LM, Zochowski MR. Formation and Dynamics of Waves in a Cortical Model of Cholinergic Modulation. Plos Computational Biology. 11: e1004449. PMID 26295587 DOI: 10.1371/Journal.Pcbi.1004449  0.567
2015 Leone MJ, Schurter BN, Letson B, Booth V, Zochowski M, Fink CG. Synchronization properties of heterogeneous neuronal networks with mixed excitability type. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 91: 032813. PMID 25871163 DOI: 10.1103/Physreve.91.032813  0.481
2015 Mofakham S, Zochowski M. Measuring predictability of autonomous network transitions into bursting dynamics. Plos One. 10: e0122225. PMID 25855975 DOI: 10.1371/Journal.Pone.0122225  0.79
2015 Shtrahman E, Zochowski M. Pattern segmentation with activity dependent natural frequency shift and sub-threshold resonance. Scientific Reports. 5: 8851. PMID 25747319 DOI: 10.1038/srep08851  0.468
2015 Roach JP, Ben-Jacob E, Sander LM, Zochowski MR. Modeling the formation and dynamics of cortical waves induced by cholinergic modulation Bmc Neuroscience. 16. DOI: 10.1186/1471-2202-16-S1-P304  0.527
2015 Rich S, Booth V, Zochowski M. The role of adaptation current in synchronously firing inhibitory neural networks with various topologies Bmc Neuroscience. 16. DOI: 10.1186/1471-2202-16-S1-P303  0.489
2015 Mofakham S, Fink CG, Booth V, Zochowski MR. Network heterogeneity and seizure generation Bmc Neuroscience. 16. DOI: 10.1186/1471-2202-16-S1-P302  0.772
2014 Maruyama D, Zochowski M. Competition and cooperation between active intra-network and passive extra-network transport processes. Scientific Reports. 4: 5269. PMID 24920178 DOI: 10.1038/srep05269  0.423
2014 Ognjanovski N, Maruyama D, Lashner N, Zochowski M, Aton SJ. CA1 hippocampal network activity changes during sleep-dependent memory consolidation. Frontiers in Systems Neuroscience. 8: 61. PMID 24860440 DOI: 10.3389/Fnsys.2014.00061  0.371
2014 Knudstrup S, Zochowski M, Booth V. Synaptic loss and synaptic plasticity in heterogeneous neural networks Journal of Complex Networks. 4: 115-126. DOI: 10.1093/Comnet/Cnv011  0.458
2013 Fink CG, Murphy GG, Zochowski M, Booth V. A dynamical role for acetylcholine in synaptic renormalization. Plos Computational Biology. 9: e1002939. PMID 23516342 DOI: 10.1371/Journal.Pcbi.1002939  0.381
2013 Maruyama D, Zochowski M. Dynamics of two-process astrocyte networks Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P433  0.477
2013 Mofakham S, Zochowski M. Neuronal signatures of network transition into bursting Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P432  0.8
2013 Shtrahman E, Zochowski M. Neuronal network information processing through heterogeneities and resonance frequency shifts Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P361  0.472
2013 Roach JP, Zochowski MR, Sander LM. Network topology and intrinsic excitability of the existing network drive integration patterns in a model of adult neurogenesis Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P342  0.384
2013 Fink CG, Zochowski M, Booth V. Neural network modulation, dynamics, and plasticity 2013 Ieee Global Conference On Signal and Information Processing, Globalsip 2013 - Proceedings. 843-846. DOI: 10.1109/GlobalSIP.2013.6737023  0.338
2012 Wang JX, Zochowski M. Interactions of excitatory and inhibitory feedback topologies in facilitating pattern separation and retrieval. Neural Computation. 24: 32-59. PMID 22023193 DOI: 10.1162/Neco_A_00220  0.517
2011 Lau T, Zochowski M. Interaction between connectivity and oscillatory currents in a heterogeneous neuronal network. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 83: 051908. PMID 21728572 DOI: 10.1103/Physreve.83.051908  0.652
2011 Fink CG, Booth V, Zochowski M. Cellularly-driven differences in network synchronization propensity are differentially modulated by firing frequency. Plos Computational Biology. 7: e1002062. PMID 21625571 DOI: 10.1371/Journal.Pcbi.1002062  0.483
2011 Lau T, Zochowski M. The resonance frequency shift, pattern formation, and dynamical network reorganization via sub-threshold input. Plos One. 6: e18983. PMID 21526162 DOI: 10.1371/Journal.Pone.0018983  0.662
2011 Smith TL, Zochowski M. The effects of conduction delay on temporal ordering in leaky integrate and fire neuronal networks Bmc Neuroscience. 12. DOI: 10.1186/1471-2202-12-S1-P382  0.483
2010 Schneider-Mizell CM, Parent JM, Ben-Jacob E, Zochowski MR, Sander LM. From network structure to network reorganization: implications for adult neurogenesis. Physical Biology. 7: 046008. PMID 21076203 DOI: 10.1088/1478-3975/7/4/046008  0.681
2010 Feldt S, Wang JX, Shtrahman E, Dzakpasu R, Olariu E, Zochowski M. Functional clustering in hippocampal cultures: relating network structure and dynamics. Physical Biology. 7: 046004. PMID 20978314 DOI: 10.1088/1478-3975/7/4/046004  0.782
2010 Feldt S, Wang JX, Hetrick VL, Berke JD, Zochowski M. Memory formation: from network structure to neural dynamics. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 368: 2251-67. PMID 20368245 DOI: 10.1098/Rsta.2010.0033  0.79
2010 Lau T, Gage GJ, Berke JD, Zochowski M. Local dynamics of gap-junction-coupled interneuron networks. Physical Biology. 7: 16015. PMID 20228446 DOI: 10.1088/1478-3975/7/1/016015  0.656
2010 Fink C, Booth V, Zochowski M. Network effects of frequency dependent phase response curves Bmc Neuroscience. 11. DOI: 10.1186/1471-2202-11-S1-P40  0.464
2009 Feldt S, Waddell J, Hetrick VL, Berke JD, Zochowski M. Functional clustering algorithm for the analysis of dynamic network data. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 79: 056104. PMID 19518518 DOI: 10.1103/PhysRevE.79.056104  0.665
2009 Bogaard A, Parent J, Zochowski M, Booth V. Interaction of cellular and network mechanisms in spatiotemporal pattern formation in neuronal networks. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 1677-87. PMID 19211875 DOI: 10.1523/Jneurosci.5218-08.2009  0.779
2008 Wang JX, Poe G, Zochowski M. From network heterogeneities to familiarity detection and hippocampal memory management. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 78: 041905. PMID 18999453 DOI: 10.1103/Physreve.78.041905  0.748
2008 Feldt S, Waddell J, Hetrick VL, Berke JD, Zochowski M. Functional structure from dynamic clustering of spike train data Bmc Neuroscience. 9. DOI: 10.1186/1471-2202-9-S1-P18  0.722
2008 Bogaard A, Zochowski M, Booth V. Interaction of membrane dynamics with network structure and its effects on spatio-temporal network patterning Bmc Neuroscience. 9. DOI: 10.1186/1471-2202-9-S1-P147  0.686
2007 Waddell J, Zochowski M. Intraburst versus interburst locking in networks of driven nonidentical oscillators. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 76: 056216. PMID 18233748 DOI: 10.1103/Physreve.76.056216  0.693
2007 Feldt S, Osterhage H, Mormann F, Lehnertz K, Zochowski M. Internetwork and intranetwork communications during bursting dynamics: applications to seizure prediction. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 76: 021920. PMID 17930078 DOI: 10.1103/Physreve.76.021920  0.438
2007 Jablonski P, Poe GR, Zochowski M. Structural network heterogeneities and network dynamics: a possible dynamical mechanism for hippocampal memory reactivation. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 75: 011912. PMID 17358189 DOI: 10.1103/Physreve.75.011912  0.737
2007 Singer BH, Kim S, Zochowski M. Binaral interaction and centrifugal input enhances spatial contrast in olfactory bulb activation. The European Journal of Neuroscience. 25: 576-86. PMID 17284200 DOI: 10.1111/j.1460-9568.2007.05279.x  0.638
2007 Waddell J, Dzakpasu R, Booth V, Riley B, Reasor J, Poe G, Zochowski M. Causal entropies--a measure for determining changes in the temporal organization of neural systems. Journal of Neuroscience Methods. 162: 320-32. PMID 17275095 DOI: 10.1016/J.Jneumeth.2006.12.008  0.796
2006 Dzakpasu R, Patel K, Robinson N, Harrington MA, Zochowski M. Measuring asymmetric temporal interdependencies in simulated and biological networks. Chaos (Woodbury, N.Y.). 16: 043121. PMID 17199399 DOI: 10.1063/1.2401130  0.358
2006 Waddell J, Zochowski M. Network reorganization driven by temporal interdependence of its elements. Chaos (Woodbury, N.Y.). 16: 023106. PMID 16822009 DOI: 10.1063/1.2189972  0.722
2006 Singer BH, Derchansky M, Carlen PL, Zochowski M. Lag synchrony measures dynamical processes underlying progression of seizure states. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 73: 021910. PMID 16605365 DOI: 10.1103/Physreve.73.021910  0.577
2006 Kim S, Singer BH, Zochowski M. Changing roles for temporal representation of odorant during the oscillatory response of the olfactory bulb. Neural Computation. 18: 794-816. PMID 16494691 DOI: 10.1162/089976606775774697  0.616
2006 Wuskell JP, Boudreau D, Wei MD, Jin L, Engl R, Chebolu R, Bullen A, Hoffacker KD, Kerimo J, Cohen LB, Zochowski MR, Loew LM. Synthesis, spectra, delivery and potentiometric responses of new styryl dyes with extended spectral ranges. Journal of Neuroscience Methods. 151: 200-15. PMID 16253342 DOI: 10.1016/J.Jneumeth.2005.07.013  0.389
2005 Rychwalska A, JabÅ‚oÅ„ski P, Zochowski M, Nowak A. Novelty based feedback regulation in artificial neural networks. Acta Neurobiologiae Experimentalis. 65: 453-63. PMID 16366398  0.314
2005 Percha B, Dzakpasu R, Zochowski M, Parent J. Transition from local to global phase synchrony in small world neural network and its possible implications for epilepsy. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 72: 031909. PMID 16241484 DOI: 10.1103/Physreve.72.031909  0.617
2005 Zochowski MR, Cohen LB. Oscillations in the olfactory bulb carry information about odorant history. Journal of Neurophysiology. 94: 2667-75. PMID 15972833 DOI: 10.1152/jn.00328.2005  0.393
2004 Dzakpasu R, Zochowski M. Adaptation through minimization of the phase lag in coupled nonidentical systems. Chaos (Woodbury, N.Y.). 14: 583-91. PMID 15446968 DOI: 10.1063/1.1772171  0.3
2003 Zecevic D, Djurisic M, Cohen LB, Antic S, Wachowiak M, Falk CX, Zochowski MR. Imaging nervous system activity with voltage-sensitive dyes. Current Protocols in Neuroscience / Editorial Board, Jacqueline N. Crawley ... [Et Al.]. Unit 6.17. PMID 18428582 DOI: 10.1002/0471142301.Ns0617S23  0.75
2003 Djurisic M, Zochowski M, Wachowiak M, Falk CX, Cohen LB, Zecevic D. Optical monitoring of neural activity using voltage-sensitive dyes. Methods in Enzymology. 361: 423-51. PMID 12624923 DOI: 10.1016/S0076-6879(03)61022-0  0.754
2003 Lam YW, Cohen LB, Zochowski MR. Odorant specificity of three oscillations and the DC signal in the turtle olfactory bulb. The European Journal of Neuroscience. 17: 436-46. PMID 12581162 DOI: 10.1046/j.1460-9568.2003.02457.x  0.414
2002 Johenning FW, Zochowski M, Conway SJ, Holmes AB, Koulen P, Ehrlich BE. Distinct intracellular calcium transients in neurites and somata integrate neuronal signals. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 22: 5344-53. PMID 12097486 DOI: 10.1523/Jneurosci.22-13-05344.2002  0.327
2002 Wachowiak M, Cohen LB, Zochowski MR. Distributed and concentration-invariant spatial representations of odorants by receptor neuron input to the turtle olfactory bulb. Journal of Neurophysiology. 87: 1035-45. PMID 11826067 DOI: 10.1152/Jn.00522.2001  0.619
2000 Wachowiak M, Zochowski M, Cohen LB, Falk CX. The spatial representation of odors by olfactory receptor neuron input to the olfactory bulb is concentration invariant. The Biological Bulletin. 199: 162-3. PMID 11081714 DOI: 10.2307/1542876  0.646
2000 Zochowski M, Cohen LB, Fuhrmann G, Kleinfeld D. Distributed and partially separate pools of neurons are correlated with two different components of the gill-withdrawal reflex in Aplysia. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 20: 8485-92. PMID 11069956 DOI: 10.1523/Jneurosci.20-22-08485.2000  0.536
2000 Zochowski M, Wachowiak M, Falk CX, Cohen LB, Lam YW, Antic S, Zecevic D. Imaging membrane potential with voltage-sensitive dyes. The Biological Bulletin. 198: 1-21. PMID 10707808 DOI: 10.2307/1542798  0.768
2000 Lam YW, Cohen LB, Wachowiak M, Zochowski MR. Odors elicit three different oscillations in the turtle olfactory bulb. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 20: 749-62. PMID 10632604 DOI: 10.1523/Jneurosci.20-02-00749.2000  0.627
1999 Antic S, Cohen LB, Lam YW, Wachowiak M, Zecevic D, Zochowski M. Fast multisite optical measurement of membrane potential: three examples. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 13: S271-6. PMID 10619142 DOI: 10.1096/Fasebj.13.9002.S271  0.738
1998 Liebovitch LS, Zochowski M. Significance of updating schemes in computational models: Dynamics of neutral networks Journal of Statistical Physics. 90: 253-260. DOI: 10.1023/A:1023259903363  0.424
1997 Liebovitch LS, Zochowski M. Dynamics of neural networks relevant to properties of proteins Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 56: 931-935. DOI: 10.1103/Physreve.56.931  0.315
1994 Zochowski M, Lewenstein M, Nowak A. Local noise in neural networks models with self-control. International Journal of Neural Systems. 5: 287-98. PMID 7711961 DOI: 10.1142/S0129065794000293  0.437
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