Shunhua Han, Ph.D. - Publications

Affiliations: 
2016-2021 Institute of Bioinformatics University of Georgia, Athens, Athens, GA, United States 
Area:
Computational Biology, Genome Biology
Website:
https://www.linkedin.com/in/shunhua-han-163a3a75/

7 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Chen J, Basting PJ, Han S, Garfinkel DJ, Bergman CM. Reproducible evaluation of transposable element detectors with McClintock 2 guides accurate inference of Ty insertion patterns in yeast. Mobile Dna. 14: 8. PMID 37452430 DOI: 10.1186/s13100-023-00296-4  0.729
2023 Chen J, Basting PJ, Han S, Garfinkel DJ, Bergman CM. Reproducible evaluation of transposable element detectors with McClintock 2 guides accurate inference of Ty insertion patterns in yeast. Biorxiv : the Preprint Server For Biology. PMID 36824955 DOI: 10.1101/2023.02.13.528343  0.729
2022 Han S, Dias GB, Basting PJ, Viswanatha R, Perrimon N, Bergman CM. Local assembly of long reads enables phylogenomics of transposable elements in a polyploid cell line. Nucleic Acids Research. PMID 36156149 DOI: 10.1093/nar/gkac794  0.756
2022 Han S, Dias GB, Basting PJ, Nelson MG, Patel S, Marzo M, Bergman CM. Ongoing transposition in cell culture reveals the phylogeny of diverse Drosophila S2 sub-lines. Genetics. PMID 35536183 DOI: 10.1093/genetics/iyac077  0.627
2021 Han S, Basting PJ, Dias GB, Luhur A, Zelhof AC, Bergman CM. Transposable element profiles reveal cell line identity and loss of heterozygosity in Drosophila cell culture. Genetics. 219. PMID 34849875 DOI: 10.1093/genetics/iyab113  0.747
2021 Mariyappa D, Rusch DB, Han S, Luhur A, Overton D, Miller DFB, Bergman CM, Zelhof AC. A novel transposable element based authentication protocol for Drosophila cell lines. G3 (Bethesda, Md.). PMID 34849844 DOI: 10.1093/g3journal/jkab403  0.721
2017 Bergman CM, Han S, Nelson MG, Bondarenko V, Kozeretska I. Genomic analysis of P elements in natural populations of Drosophila melanogaster. Peerj. 5: e3824. PMID 28929030 DOI: 10.7717/Peerj.3824  0.67
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