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Hua-Ying Fan, Ph.D. - Publications

Affiliations: 
Biochemistry and Biophysics University of Pennsylvania, Philadelphia, PA, United States 
Area:
Chromatin biology
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30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Bilkis R, Lake RJ, Cooper KL, Tomkinson A, Fan HY. The CSB chromatin remodeler regulates PARP1- and PARP2-mediated single-strand break repair at actively transcribed DNA regions. Nucleic Acids Research. PMID 37326017 DOI: 10.1093/nar/gkad515  0.308
2018 Boetefuer EL, Lake RJ, Fan HY. Mechanistic insights into the regulation of transcription and transcription-coupled DNA repair by Cockayne syndrome protein B. Nucleic Acids Research. PMID 30032309 DOI: 10.1093/nar/gky660  0.33
2018 Murphy CI, Piwnica-Worms H, Grünwald S, Romanow WG, Francis N, Fan HY, Marr S. Expression and Purification of Recombinant Proteins Using the Baculovirus System. Current Protocols in Molecular Biology. e61. PMID 29953734 DOI: 10.1002/cpmb.61  0.623
2017 Lee JY, Lake RJ, Kirk J, Bohr VA, Fan HY, Hohng S. NAP1L1 accelerates activation and decreases pausing to enhance nucleosome remodeling by CSB. Nucleic Acids Research. PMID 28369616 DOI: 10.1093/Nar/Gkx188  0.452
2015 Lake RJ, Boetefuer EL, Won KJ, Fan HY. The CSB chromatin remodeler and CTCF architectural protein cooperate in response to oxidative stress. Nucleic Acids Research. PMID 26578602 DOI: 10.1093/Nar/Gkv1219  0.328
2014 Lake RJ, Boetefuer EL, Tsai PF, Jeong J, Choi I, Won KJ, Fan HY. The sequence-specific transcription factor c-Jun targets Cockayne syndrome protein B to regulate transcription and chromatin structure. Plos Genetics. 10: e1004284. PMID 24743307 DOI: 10.1371/Journal.Pgen.1004284  0.432
2014 Lake RJ, Tsai PF, Choi I, Won KJ, Fan HY. RBPJ, the major transcriptional effector of Notch signaling, remains associated with chromatin throughout mitosis, suggesting a role in mitotic bookmarking. Plos Genetics. 10: e1004204. PMID 24603501 DOI: 10.1371/Journal.Pgen.1004204  0.439
2013 Cho I, Tsai PF, Lake RJ, Basheer A, Fan HY. ATP-dependent chromatin remodeling by Cockayne syndrome protein B and NAP1-like histone chaperones is required for efficient transcription-coupled DNA repair. Plos Genetics. 9: e1003407. PMID 23637612 DOI: 10.1371/Journal.Pgen.1003407  0.443
2013 Lake RJ, Fan HY. Structure, function and regulation of CSB: a multi-talented gymnast. Mechanisms of Ageing and Development. 134: 202-11. PMID 23422418 DOI: 10.1016/J.Mad.2013.02.004  0.395
2011 Lake RJ, Basheer A, Fan HY. Reciprocally regulated chromatin association of Cockayne syndrome protein B and p53 protein. The Journal of Biological Chemistry. 286: 34951-8. PMID 21852235 DOI: 10.1074/Jbc.M111.252643  0.382
2010 Lake RJ, Geyko A, Hemashettar G, Zhao Y, Fan HY. UV-induced association of the CSB remodeling protein with chromatin requires ATP-dependent relief of N-terminal autorepression. Molecular Cell. 37: 235-46. PMID 20122405 DOI: 10.1016/J.Molcel.2009.10.027  0.38
2009 Lavigne M, Eskeland R, Azebi S, Saint-André V, Jang SM, Batsché E, Fan HY, Kingston RE, Imhof A, Muchardt C. Interaction of HP1 and Brg1/Brm with the globular domain of histone H3 is required for HP1-mediated repression. Plos Genetics. 5: e1000769. PMID 20011120 DOI: 10.1371/Journal.Pgen.1000769  0.603
2008 He X, Fan HY, Garlick JD, Kingston RE. Diverse regulation of SNF2h chromatin remodeling by noncatalytic subunits. Biochemistry. 47: 7025-33. PMID 18553938 DOI: 10.1021/Bi702304P  0.602
2008 Newman JC, Bailey AD, Fan HY, Pavelitz T, Weiner AM. An abundant evolutionarily conserved CSB-PiggyBac fusion protein expressed in Cockayne syndrome. Plos Genetics. 4: e1000031. PMID 18369450 DOI: 10.1371/Journal.Pgen.1000031  0.681
2008 Trotter KW, Fan HY, Ivey ML, Kingston RE, Archer TK. The HSA domain of BRG1 mediates critical interactions required for glucocorticoid receptor-dependent transcriptional activation in vivo. Molecular and Cellular Biology. 28: 1413-26. PMID 18086889 DOI: 10.1128/Mcb.01301-07  0.612
2007 Dennis JH, Fan HY, Reynolds SM, Yuan G, Meldrim JC, Richter DJ, Peterson DG, Rando OJ, Noble WS, Kingston RE. Independent and complementary methods for large-scale structural analysis of mammalian chromatin. Genome Research. 17: 928-39. PMID 17568008 DOI: 10.1101/Gr.5636607  0.669
2007 Zhang Z, Fan HY, Goldman JA, Kingston RE. Homology-driven chromatin remodeling by human RAD54. Nature Structural & Molecular Biology. 14: 397-405. PMID 17417655 DOI: 10.1038/Nsmb1223  0.592
2006 He X, Fan HY, Narlikar GJ, Kingston RE. Human ACF1 alters the remodeling strategy of SNF2h. The Journal of Biological Chemistry. 281: 28636-47. PMID 16877760 DOI: 10.1074/Jbc.M603008200  0.705
2005 Fan HY, Trotter KW, Archer TK, Kingston RE. Swapping function of two chromatin remodeling complexes. Molecular Cell. 17: 805-15. PMID 15780937 DOI: 10.1016/J.Molcel.2005.02.024  0.591
2004 Murphy CI, Piwnica-Worms H, Grünwald S, Romanow WG, Francis N, Fan HY. Overview of the baculovirus expression system. Current Protocols in Molecular Biology / Edited by Frederick M. Ausubel ... [Et Al.]. Unit 16.9. PMID 18265342 DOI: 10.1002/0471142727.mb1609s65  0.643
2004 Murphy CI, Piwnica-Worms H, Grünwald S, Romanow WG, Francis N, Fan HY. Expression and purification of recombinant proteins using the baculovirus system. Current Protocols in Molecular Biology / Edited by Frederick M. Ausubel ... [Et Al.]. Unit 16.11. PMID 18265341 DOI: 10.1002/0471142727.Mb1611S65  0.625
2004 Murphy CI, Piwnica-Worms H, Grünwald S, Romanow WG, Francis N, Fan HY. Maintenance of insect cell cultures and generation of recombinant baculoviruses. Current Protocols in Molecular Biology / Edited by Frederick M. Ausubel ... [Et Al.]. Unit 16.10. PMID 18265340 DOI: 10.1002/0471142727.Mb1610S65  0.619
2004 Fan HY, Narlikar GJ, Kingston RE. Noncovalent modification of chromatin: different remodeled products with different ATPase domains. Cold Spring Harbor Symposia On Quantitative Biology. 69: 183-92. PMID 16117648 DOI: 10.1101/Sqb.2004.69.183  0.644
2003 Fan HY, He X, Kingston RE, Narlikar GJ. Distinct strategies to make nucleosomal DNA accessible. Molecular Cell. 11: 1311-22. PMID 12769854 DOI: 10.1016/S1097-2765(03)00192-8  0.686
2002 Narlikar GJ, Fan HY, Kingston RE. Cooperation between complexes that regulate chromatin structure and transcription. Cell. 108: 475-87. PMID 11909519 DOI: 10.1016/S0092-8674(02)00654-2  0.706
2001 Fan HY, Merker RJ, Klein HL. High-copy-number expression of Sub2p, a member of the RNA helicase superfamily, suppresses hpr1-mediated genomic instability Molecular and Cellular Biology. 21: 5459-5470. PMID 11463828 DOI: 10.1128/Mcb.21.16.5459-5470.2001  0.69
2000 Yu A, Fan HY, Liao D, Bailey AD, Weiner AM. Activation of p53 or loss of the Cockayne syndrome group B repair protein causes metaphase fragility of human U1, U2, and 5S genes. Molecular Cell. 5: 801-10. PMID 10882116 DOI: 10.1016/S1097-2765(00)80320-2  0.516
1999 Chang M, French-Cornay D, Fan HY, Klein H, Denis CL, Jaehning JA. A complex containing RNA polymerase II, Paf1p, Cdc73p, Hpr1p, and Ccr4p plays a role in protein kinase C signaling Molecular and Cellular Biology. 19: 1056-1067. PMID 9891041 DOI: 10.1128/Mcb.19.2.1056  0.602
1996 Fan HY, Cheng KK, Klein HL. Mutations in the RNA Polymerase II transcription machinery suppress the hyperrecombination Mutant hpr1Δ of Saccharomyces cerevisiae Genetics. 142: 749-759. PMID 8849885  0.628
1994 Fan HY, Klein HL. Characterization of mutations that suppress the temperature-sensitive growth of the hpr1Δ mutant of Saccharomyces cerevisiae Genetics. 137: 945-956. PMID 7982575  0.552
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