18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Oliver A, Podell S, Pinowska A, Traller JC, Smith SR, McClure R, Beliaev A, Bohutskyi P, Hill EA, Rabines A, Zheng H, Allen LZ, Kuo A, Grigoriev IV, Allen AE, et al. Diploid genomic architecture of Nitzschia inconspicua, an elite biomass production diatom. Scientific Reports. 11: 15592. PMID 34341414 DOI: 10.1038/s41598-021-95106-3  0.557
2020 Tan MH, Smith SR, Hixson KK, Tan J, McCarthy JK, Kustka AB, Allen AE. The Importance of Protein Phosphorylation for Signaling and Metabolism in Response to Diel Light Cycling and Nutrient Availability in a Marine Diatom. Biology. 9. PMID 32640597 DOI: 10.3390/Biology9070155  0.554
2019 Smith SR, Dupont CL, McCarthy JK, Broddrick JT, Oborník M, Horák A, Füssy Z, Cihlář J, Kleessen S, Zheng H, McCrow JP, Hixson KK, Araújo WL, Nunes-Nesi A, Fernie A, et al. Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom. Nature Communications. 10: 4552. PMID 31591397 DOI: 10.1038/S41467-019-12407-Y  0.635
2019 Broddrick JT, Du N, Smith SR, Tsuji Y, Jallet D, Ware MA, Peers G, Matsuda Y, Dupont CL, Mitchell BG, Palsson BO, Allen AE. Cross-compartment metabolic coupling enables flexible photoprotective mechanisms in the diatom Phaeodactylum tricornutum. The New Phytologist. PMID 30636322 DOI: 10.1111/Nph.15685  0.612
2017 McCarthy JK, Smith SR, McCrow JP, Tan M, Zheng H, Beeri K, Roth RA, Lichtle C, Goodenough U, Bowler C, Dupont CL, Allen AE. Nitrate Reductase Knockout Uncouples Nitrate Transport from Nitrate Assimilation and Drives Repartitioning of Carbon Flux in a Model Pennate Diatom. The Plant Cell. PMID 28765511 DOI: 10.1105/Tpc.16.00910  0.648
2017 Smith SR, Gillard JT, Kustka AB, McCrow JP, Badger JH, Zheng H, New AM, Dupont CL, Obata T, Fernie AR, Allen AE. Correction: Transcriptional Orchestration of the Global Cellular Response of a Model Pennate Diatom to Diel Light Cycling under Iron Limitation. Plos Genetics. 13: e1006688. PMID 28355217 DOI: 10.1371/journal.pgen.1006688  0.485
2016 Davis A, Abbriano R, Smith SR, Hildebrand M. Clarification of Photorespiratory Processes and the Role of Malic Enzyme in Diatoms. Protist. 168: 134-153. PMID 28104538 DOI: 10.1016/J.Protis.2016.10.005  0.628
2016 Smith SR, Gillard JT, Kustka AB, McCrow JP, Badger JH, Zheng H, New AM, Dupont CL, Obata T, Fernie AR, Allen AE. Transcriptional Orchestration of the Global Cellular Response of a Model Pennate Diatom to Diel Light Cycling under Iron Limitation. Plos Genetics. 12: e1006490. PMID 27973599 DOI: 10.1371/Journal.Pgen.1006490  0.569
2016 Traller JC, Cokus SJ, Lopez DA, Gaidarenko O, Smith SR, McCrow JP, Gallaher SD, Podell S, Thompson M, Cook O, Morselli M, Jaroszewicz A, Allen EE, Allen AE, Merchant SS, et al. Genome and methylome of the oleaginous diatom Cyclotella cryptica reveal genetic flexibility toward a high lipid phenotype. Biotechnology For Biofuels. 9: 258. PMID 27933100 DOI: 10.1186/S13068-016-0670-3  0.668
2016 Caron DA, Alexander H, Allen AE, Archibald JM, Armbrust EV, Bachy C, Bell CJ, Bharti A, Dyhrman ST, Guida SM, Heidelberg KB, Kaye JZ, Metzner J, Smith SR, Worden AZ. Probing the evolution, ecology and physiology of marine protists using transcriptomics. Nature Reviews. Microbiology. PMID 27867198 DOI: 10.1038/Nrmicro.2016.160  0.587
2016 Hildebrand M, Davis A, Abbriano R, Pugsley HR, Traller JC, Smith SR, Shrestha RP, Cook O, Sánchez-Alvarez EL, Manandhar-Shrestha K, Alderete B. Applications of Imaging Flow Cytometry for Microalgae. Methods in Molecular Biology (Clifton, N.J.). 1389: 47-67. PMID 27460237 DOI: 10.1007/978-1-4939-3302-0_4  0.537
2016 Smith SR, Glé C, Abbriano RM, Traller JC, Davis A, Trentacoste E, Vernet M, Allen AE, Hildebrand M. Transcript level coordination of carbon pathways during silicon starvation-induced lipid accumulation in the diatom Thalassiosira pseudonana. The New Phytologist. PMID 26844818 DOI: 10.1111/Nph.13843  0.706
2015 Zheng H, Lefebvre SC, Smith SR, Hanly TJ, Suzuki Y, Allen AE. Successful diatom transcription factor synthesis and downstream cloning using the bioxpTM 3200 system Biotechniques. 59: 46-47. DOI: 10.2144/000114311  0.493
2014 Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, Amaral-Zettler LA, Armbrust EV, Archibald JM, Bharti AK, Bell CJ, Beszteri B, Bidle KD, Cameron CT, Campbell L, Caron DA, ... ... Smith SR, et al. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. Plos Biology. 12: e1001889. PMID 24959919 DOI: 10.1371/Journal.Pbio.1001889  0.321
2013 Trentacoste EM, Shrestha RP, Smith SR, Glé C, Hartmann AC, Hildebrand M, Gerwick WH. Metabolic engineering of lipid catabolism increases microalgal lipid accumulation without compromising growth. Proceedings of the National Academy of Sciences of the United States of America. 110: 19748-53. PMID 24248374 DOI: 10.1073/Pnas.1309299110  0.588
2013 Hildebrand M, Abbriano RM, Polle JE, Traller JC, Trentacoste EM, Smith SR, Davis AK. Metabolic and cellular organization in evolutionarily diverse microalgae as related to biofuels production. Current Opinion in Chemical Biology. 17: 506-14. PMID 23538202 DOI: 10.1016/J.Cbpa.2013.02.027  0.626
2012 Hildebrand M, Davis AK, Smith SR, Traller JC, Abbriano R. The place of diatoms in the biofuels industry Biofuels. 3: 221-240. DOI: 10.4155/BFS.11.157  0.583
2012 Smith SR, Abbriano RM, Hildebrand M. Comparative analysis of diatom genomes reveals substantial differences in the organization of carbon partitioning pathways Algal Research. 1: 2-16. DOI: 10.1016/J.Algal.2012.04.003  0.653
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