Michal Dabrowski - Publications

Nencki Institute, Warsaw, Poland 
Bioinformatics of regulation of gene expression

63 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Przanowski P, Mondal SS, Cabaj A, Dębski KJ, Wojtas B, Gielniewski B, Kaza B, Kaminska B, Dabrowski M. Open chromatin landscape of rat microglia upon proinvasive or inflammatory polarization. Glia. PMID 31339627 DOI: 10.1002/glia.23686  1
2019 Kulesza DW, Ramji K, Maleszewska M, Mieczkowski J, Dabrowski M, Chouaib S, Kaminska B. Search for novel STAT3-dependent genes reveals SERPINA3 as a new STAT3 target that regulates invasion of human melanoma cells. Laboratory Investigation; a Journal of Technical Methods and Pathology. PMID 31278347 DOI: 10.1038/s41374-019-0288-8  1
2018 Dabrowski MJ, Draminski M, Diamanti K, Stepniak K, Mozolewska MA, Teisseyre P, Koronacki J, Komorowski J, Kaminska B, Wojtas B. Unveiling new interdependencies between significant DNA methylation sites, gene expression profiles and glioma patients survival. Scientific Reports. 8: 4390. PMID 29535343 DOI: 10.1038/s41598-018-22829-1  1
2017 Gieryng A, Pszczolkowska D, Bocian K, Dabrowski M, Rajan WD, Kloss M, Mieczkowski J, Kaminska B. Immune microenvironment of experimental rat C6 gliomas resembles human glioblastomas. Scientific Reports. 7: 17556. PMID 29242629 DOI: 10.1038/s41598-017-17752-w  1
2017 Przanowski P, Loska S, Cysewski D, Dabrowski M, Kaminska B. ISG'ylation increases stability of numerous proteins including Stat1, which prevents premature termination of immune response in LPS-stimulated microglia. Neurochemistry International. PMID 28774718 DOI: 10.1016/j.neuint.2017.07.013  1
2016 Kijewska M, Kocyk M, Kloss M, Stepniak K, Korwek Z, Polakowska R, Dabrowski M, Gieryng A, Wojtas B, Ciechomska IA, Kaminska B. The embryonic type of SPP1 transcriptional regulation is re-activated in glioblastoma. Oncotarget. PMID 28030801 DOI: 10.18632/oncotarget.14092  1
2016 Torabi Moghadam B, Dabrowski M, Kaminska B, Grabherr MG, Komorowski J. Combinatorial identification of DNA methylation patterns over age in the human brain. Bmc Bioinformatics. 17: 393. PMID 27663458 DOI: 10.1186/s12859-016-1259-3  1
2016 Khan MI, Dębski KJ, Dabrowski M, Czarnecka AM, Szczylik C. Gene Set Enrichment Analysis and Ingenuity Pathway Analysis of Metastatic Clear Cell Renal Cell Carcinoma Cell Line. American Journal of Physiology. Renal Physiology. ajprenal.00138.2016. PMID 27279483 DOI: 10.1152/ajprenal.00138.2016  0.4
2016 Umer HM, Cavalli M, Dabrowski MJ, Diamanti K, Kruczyk M, Pan G, Komorowski J, Wadelius C. A Significant Regulatory Mutation Burden at a High Affinity Position of the Ctcf Motif in Gastrointestinal Cancers. Human Mutation. PMID 27174533 DOI: 10.1002/humu.23014  0.52
2015 Nagalski A, Puelles L, Dabrowski M, Wegierski T, Kuznicki J, Wisniewska MB. Molecular anatomy of the thalamic complex and the underlying transcription factors. Brain Structure & Function. PMID 25963709 DOI: 10.1007/s00429-015-1052-5  0.68
2015 Dabrowski M, Dojer N, Krystkowiak I, Kaminska B, Wilczynski B. Optimally choosing PWM motif databases and sequence scanning approaches based on ChIP-seq data. Bmc Bioinformatics. 16: 140. PMID 25927199 DOI: 10.1186/s12859-015-0573-5  1
2015 Kuzniewska B, Nader K, Dabrowski M, Kaczmarek L, Kalita K. Adult Deletion of SRF Increases Epileptogenesis and Decreases Activity-Induced Gene Expression. Molecular Neurobiology. PMID 25636686 DOI: 10.1007/s12035-014-9089-7  0.68
2015 D?browski MJ, Bornelöv S, Kruczyk M, Baltzer N, Komorowski J. 'True' null allele detection in microsatellite loci: a comparison of methods, assessment of difficulties and survey of possible improvements. Molecular Ecology Resources. 15: 477-88. PMID 25187238 DOI: 10.1111/1755-0998.12326  0.52
2014 Kruczyk M, Przanowski P, Dabrowski M, Swiatek-Machado K, Mieczkowski J, Wallerman O, Ronowicz A, Piotrowski A, Wadelius C, Kaminska B, Komorowski J. Integration of genome-wide of Stat3 binding and epigenetic modification mapping with transcriptome reveals novel Stat3 target genes in glioma cells. Biochimica Et Biophysica Acta. 1839: 1341-50. PMID 25111868 DOI: 10.1016/j.bbagrm.2014.07.010  1
2014 Przanowski P, Dabrowski M, Ellert-Miklaszewska A, Kloss M, Mieczkowski J, Kaza B, Ronowicz A, Hu F, Piotrowski A, Kettenmann H, Komorowski J, Kaminska B. The signal transducers Stat1 and Stat3 and their novel target Jmjd3 drive the expression of inflammatory genes in microglia. Journal of Molecular Medicine (Berlin, Germany). 92: 239-54. PMID 24097101 DOI: 10.1007/s00109-013-1090-5  1
2013 Krystkowiak I, Lenart J, Debski K, Kuterba P, Petas M, Kaminska B, Dabrowski M. Nencki Genomics Database--Ensembl funcgen enhanced with intersections, user data and genome-wide TFBS motifs. Database : the Journal of Biological Databases and Curation. 2013: bat069. PMID 24089456 DOI: 10.1093/database/bat069  1
2013 Ellert-Miklaszewska A, Dabrowski M, Lipko M, Sliwa M, Maleszewska M, Kaminska B. Molecular definition of the pro-tumorigenic phenotype of glioma-activated microglia. Glia. 61: 1178-90. PMID 23650109 DOI: 10.1002/glia.22510  1
2013 Klement G, Eisele L, Malinowsky D, Nolting A, Svensson M, Terp G, Weigelt D, Dabrowski M. Characterization of a ligand binding site in the human transient receptor potential ankyrin 1 pore. Biophysical Journal. 104: 798-806. PMID 23442958 DOI: 10.1016/j.bpj.2013.01.008  1
2013 Walczak A, Szczepankiewicz AA, Ruszczycki B, Magalska A, Zamlynska K, Dzwonek J, Wilczek E, Zybura-Broda K, Rylski M, Malinowska M, Dabrowski M, Szczepinska T, Pawlowski K, Pyskaty M, Wlodarczyk J, et al. Novel higher-order epigenetic regulation of the Bdnf gene upon seizures. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 2507-11. PMID 23392678 DOI: 10.1523/JNEUROSCI.1085-12.2013  1
2012 Wisniewska MB, Nagalski A, Dabrowski M, Misztal K, Kuznicki J. Novel β-catenin target genes identified in thalamic neurons encode modulators of neuronal excitability. Bmc Genomics. 13: 635. PMID 23157480 DOI: 10.1186/1471-2164-13-635  1
2012 Jonsson Fagerlund M, Sjödin J, Dabrowski MA, Krupp J. Reduced efficacy of the intravenous anesthetic agent AZD3043 at GABA(A) receptors with β2 (N289M) and β3 (N290M) point-mutations. European Journal of Pharmacology. 694: 13-9. PMID 23009769 DOI: 10.1016/j.ejphar.2012.07.040  1
2012 Besidski Y, Brown W, Bylund J, Dabrowski M, Dautrey S, Harter M, Horoszok L, Hu Y, Johnson D, Johnstone S, Jones P, Leclerc S, Kolmodin K, Kers I, Labarre M, et al. Potent and orally efficacious benzothiazole amides as TRPV1 antagonists. Bioorganic & Medicinal Chemistry Letters. 22: 6205-11. PMID 22939234 DOI: 10.1016/j.bmcl.2012.08.018  1
2012 Klement G, Babich O, Larsson O, Lund PE, Malmberg A, Sandberg L, Sands ZA, Dabrowski M. Identification of novel NaV1.7 antagonists using high throughput screening platforms. Combinatorial Chemistry & High Throughput Screening. 15: 713-20. PMID 22934951 DOI: 10.2174/138620712803519680  1
2012 Zawadzka M, Dabrowski M, Gozdz A, Szadujkis B, Sliwa M, Lipko M, Kaminska B. Early steps of microglial activation are directly affected by neuroprotectant FK506 in both in vitro inflammation and in rat model of stroke. Journal of Molecular Medicine (Berlin, Germany). 90: 1459-71. PMID 22806180 DOI: 10.1007/s00109-012-0925-9  1
2011 Adach-Kilon A, Swiatek-Machado K, Kaminska B, Dabrowski M. Signal transducer and activator of transcription 1 (Stat1) maintains basal mRNA expression of pro-survival stat3-target genes in glioma C6 cells. Journal of Cellular Biochemistry. 112: 3685-94. PMID 21815198 DOI: 10.1002/jcb.23305  1
2010 Dabrowski M, Dojer N, Zawadzka M, Mieczkowski J, Kaminska B. Comparative analysis of cis-regulation following stroke and seizures in subspaces of conserved eigensystems. Bmc Systems Biology. 4: 86. PMID 20565733 DOI: 10.1186/1752-0509-4-86  1
2010 Wisniewska MB, Misztal K, Michowski W, Szczot M, Purta E, Lesniak W, Klejman ME, Dabrowski M, Filipkowski RK, Nagalski A, Mozrzymas JW, Kuznicki J. LEF1/beta-catenin complex regulates transcription of the Cav3.1 calcium channel gene (Cacna1g) in thalamic neurons of the adult brain. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 4957-69. PMID 20371816 DOI: 10.1523/JNEUROSCI.1425-09.2010  1
2010 Szydlowska K, Gozdz A, Dabrowski M, Zawadzka M, Kaminska B. Prolonged activation of ERK triggers glutamate-induced apoptosis of astrocytes: neuroprotective effect of FK506. Journal of Neurochemistry. 113: 904-18. PMID 20202085 DOI: 10.1111/j.1471-4159.2010.06656.x  1
2010 Mieczkowski J, Tyburczy ME, Dabrowski M, Pokarowski P. Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements. Bmc Bioinformatics. 11: 104. PMID 20181266 DOI: 10.1186/1471-2105-11-104  1
2010 Jonsson Fagerlund M, Sjödin J, Krupp J, Dabrowski MA. Reduced effect of propofol at human {alpha}1{beta}2(N289M){gamma}2 and {alpha}2{beta}3(N290M){gamma}2 mutant GABA(A) receptors. British Journal of Anaesthesia. 104: 472-81. PMID 20179014 DOI: 10.1093/bja/aeq023  1
2010 Larson KC, Lipko M, Dabrowski M, Draper MP. Gng12 is a novel negative regulator of LPS-induced inflammation in the microglial cell line BV-2. Inflammation Research : Official Journal of the European Histamine Research Society ... [Et Al.]. 59: 15-22. PMID 19568691 DOI: 10.1007/s00011-009-0062-2  1
2010 Fagerlund MJ, Dabrowski MA, Eriksson LI. In reply Anesthesiology. 112: 249-250. DOI: 10.1097/ALN.0b013e3181c6611b  1
2010 Pettersson F, Granfeldt D, Newall J, Owen J, Johansson C, Wylde A, Sinclair J, Tanaka Y, Dabrowski MA, Karlsson M. Drug screening on fast kinetics ligand gated ion-channels 14th International Conference On Miniaturized Systems For Chemistry and Life Sciences 2010, Microtas 2010. 1: 152-153.  1
2009 Aneiros E, Dabrowski M. Novel temperature activation cell-based assay on thermo-TRP ion channels. Journal of Biomolecular Screening. 14: 662-7. PMID 19525488 DOI: 10.1177/1087057109336595  1
2009 Jonsson Fagerlund M, Dabrowski M, Eriksson LI. Pharmacological characteristics of the inhibition of nondepolarizing neuromuscular blocking agents at human adult muscle nicotinic acetylcholine receptor. Anesthesiology. 110: 1244-52. PMID 19417616 DOI: 10.1097/ALN.0b013e31819fade3  1
2009 Majak K, Dabrowski M, Pitkänen A. Epileptogenesis alters gene expression pattern in rats subjected to amygdala-dependent emotional learning. Neuroscience. 159: 468-82. PMID 19166914 DOI: 10.1016/j.neuroscience.2008.12.060  1
2008 Cuypers E, Dabrowski M, Horoszok L, Terp GE, Tytgat J. Transient receptor potential vanilloid 1 and xenobiotics. Cns & Neurological Disorders Drug Targets. 7: 159-71. PMID 18537644 DOI: 10.2174/187152708784083803  1
2008 Dabrowski MA, Dekermendjian K, Lund PE, Krupp JJ, Sinclair J, Larsson O. Ion channel screening technology. Cns & Neurological Disorders Drug Targets. 7: 122-8. PMID 18537641 DOI: 10.2174/187152708784083867  1
2006 Lukasiuk K, Dabrowski M, Adach A, Pitkänen A. Epileptogenesis-related genes revisited. Progress in Brain Research. 158: 223-41. PMID 17027699 DOI: 10.1016/S0079-6123(06)58011-2  1
2006 Jonsson M, Gurley D, Dabrowski M, Larsson O, Johnson EC, Eriksson LI. Distinct pharmacologic properties of neuromuscular blocking agents on human neuronal nicotinic acetylcholine receptors: a possible explanation for the train-of-four fade. Anesthesiology. 105: 521-33. PMID 16931985 DOI: 10.1097/00000542-200609000-00016  1
2006 Dabrowski M, Aerts S, Kaminska B. Prediction of a key role of motifs binding E2F and NR2F in down-regulation of numerous genes during the development of the mouse hippocampus. Bmc Bioinformatics. 7: 367. PMID 16884529 DOI: 10.1186/1471-2105-7-367  1
2006 Dabrowski M, Adach A, Aerts S, Moreau Y, Kaminska B. Identification of conserved modes of expression profiles during hippocampal development and neuronal differentiation in vitro. Journal of Neurochemistry. 97: 87-91. PMID 16635255 DOI: 10.1111/j.1471-4159.2005.03537.x  1
2006 Jonsson M, Dabrowski M, Gurley DA, Larsson O, Johnson EC, Fredholm BB, Eriksson LI. Activation and inhibition of human muscular and neuronal nicotinic acetylcholine receptors by succinylcholine. Anesthesiology. 104: 724-33. PMID 16571968 DOI: 10.1097/00000542-200604000-00017  1
2004 Hébert SS, Serneels L, Dejaegere T, Horré K, Dabrowski M, Baert V, Annaert W, Hartmann D, De Strooper B. Coordinated and widespread expression of gamma-secretase in vivo: evidence for size and molecular heterogeneity. Neurobiology of Disease. 17: 260-72. PMID 15474363 DOI: 10.1016/j.nbd.2004.08.002  1
2004 Aerts S, Thijs G, Dabrowski M, Moreau Y, De Moor B. Comprehensive analysis of the base composition around the transcription start site in Metazoa. Bmc Genomics. 5: 34. PMID 15171795 DOI: 10.1186/1471-2164-5-34  1
2004 Dabrowski M, Tarasov A, Ashcroft FM. Mapping the architecture of the ATP-binding site of the KATP channel subunit Kir6.2. The Journal of Physiology. 557: 347-54. PMID 15004210 DOI: 10.1113/jphysiol.2003.059105  1
2003 Moreau Y, Aerts S, De Moor B, De Strooper B, Dabrowski M. Comparison and meta-analysis of microarray data: from the bench to the computer desk. Trends in Genetics : Tig. 19: 570-7. PMID 14550631 DOI: 10.1016/j.tig.2003.08.006  1
2003 Dabrowski M, Larsen T, Ashcroft FM, Bondo Hansen J, Wahl P. Potent and selective activation of the pancreatic beta-cell type K(ATP) channel by two novel diazoxide analogues. Diabetologia. 46: 1375-82. PMID 12961066 DOI: 10.1007/s00125-003-1198-1  1
2003 de Tullio P, Becker B, Boverie S, Dabrowski M, Wahl P, Antoine MH, Somers F, Sebille S, Ouedraogo R, Hansen JB, Lebrun P, Pirotte B. Toward tissue-selective pancreatic B-cells KATP channel openers belonging to 3-alkylamino-7-halo-4H-1,2,4-benzothiadiazine 1,1-dioxides. Journal of Medicinal Chemistry. 46: 3342-53. PMID 12852765 DOI: 10.1021/jm021117w  1
2003 Dabrowski M, Trapp S, Ashcroft FM. Pyridine nucleotide regulation of the KATP channel Kir6.2/SUR1 expressed in Xenopus oocytes. The Journal of Physiology. 550: 357-63. PMID 12766240 DOI: 10.1113/jphysiol.2003.041715  1
2003 Dabrowski M, Aerts S, Van Hummelen P, Craessaerts K, De Moor B, Annaert W, Moreau Y, De Strooper B. Gene profiling of hippocampal neuronal culture. Journal of Neurochemistry. 85: 1279-88. PMID 12753086 DOI: 10.1046/j.1471-4159.2003.01753.x  1
2003 Reimann F, Huopio H, Dabrowski M, Proks P, Gribble FM, Laakso M, Otonkoski T, Ashcroft FM. Characterisation of new KATP-channel mutations associated with congenital hyperinsulinism in the Finnish population. Diabetologia. 46: 241-9. PMID 12627323 DOI: 10.1007/s00125-002-1014-3  1
2003 Reimann F, Dabrowski M, Jones P, Gribble FM, Ashcroft FM. Analysis of the differential modulation of sulphonylurea block of beta-cell and cardiac ATP-sensitive K+ (K(ATP)) channels by Mg-nucleotides. The Journal of Physiology. 547: 159-68. PMID 12562963 DOI: 10.1113/jphysiol.2002.031625  1
2002 Gros L, Trapp S, Dabrowski M, Ashcroft FM, Bataille D, Blache P. Characterization of two novel forms of the rat sulphonylurea receptor SUR1A2 and SUR1BDelta31. British Journal of Pharmacology. 137: 98-106. PMID 12183335 DOI: 10.1038/sj.bjp.0704836  1
2002 Matsuo M, Dabrowski M, Ueda K, Ashcroft FM. Mutations in the linker domain of NBD2 of SUR inhibit transduction but not nucleotide binding. The Embo Journal. 21: 4250-8. PMID 12169627 DOI: 10.1093/emboj/cdf419  1
2002 Dabrowski M, Ashcroft FM, Ashfield R, Lebrun P, Pirotte B, Egebjerg J, Bondo Hansen J, Wahl P. The novel diazoxide analog 3-isopropylamino-7-methoxy-4H-1,2,4-benzothiadiazine 1,1-dioxide is a selective Kir6.2/SUR1 channel opener. Diabetes. 51: 1896-906. PMID 12031979  1
2002 Konstas AA, Dabrowski M, Korbmacher C, Tucker SJ. Intrinsic sensitivity of Kir1.1 (ROMK) to glibenclamide in the absence of SUR2B. Implications for the identity of the renal ATP-regulated secretory K+ channel. The Journal of Biological Chemistry. 277: 21346-51. PMID 11927600 DOI: 10.1074/jbc.M202005200  1
2001 Dabrowski M, Wahl P, Holmes WE, Ashcroft FM. Effect of repaglinide on cloned beta cell, cardiac and smooth muscle types of ATP-sensitive potassium channels. Diabetologia. 44: 747-56. PMID 11440368 DOI: 10.1007/s001250051684  1
1998 Dabrowski M, Robinson E, Hughes SV, Bland R, Hewison M. Differential RNA display identifies novel genes associated with decreased vitamin D receptor expression. Molecular and Cellular Endocrinology. 142: 131-9. PMID 9783909 DOI: 10.1016/S0303-7207(98)00111-7  1
1997 Kaminska B, Filipkowski RK, Biedermann IW, Konopka D, Nowicka D, Hetman M, Dabrowski M, Gorecki DC, Lukasiuk K, Szklarczyk AW, Kaczmarek L. Kainate-evoked modulation of gene expression in rat brain. Acta Biochimica Polonica. 44: 781-9. PMID 9584860  1
1996 Hewison M, Dabrowski M, Vadher S, Faulkner L, Cockerill FJ, Brickell PM, O'Riordan JL, Katz DR. Antisense inhibition of vitamin D receptor expression induces apoptosis in monoblastoid U937 cells. Journal of Immunology (Baltimore, Md. : 1950). 156: 4391-400. PMID 8666812  1
1995 Dabrowski M. [Looking for a needle in a haystack. Identification of differentially expressed genes]. Postepy Biochemii. 41: 110-5. PMID 7479438  1
1994 Hewison M, Dabrowski M, Faulkner L, Hughson E, Vadher S, Rut A, Brickell PM, O'Riordan JL, Katz DR. Transfection of vitamin D receptor cDNA into the monoblastoid cell line U937. The role of vitamin D3 in homotypic macrophage adhesion. Journal of Immunology (Baltimore, Md. : 1950). 153: 5709-19. PMID 7989768  1
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