| Year |
Citation |
Score |
| 2023 |
Lamberti ML, Spangler RK, Cerdeira V, Ares M, Rivollet L, Ashley GE, Coronado AR, Tripathi S, Spiousas I, Ward JD, Partch CL, Bénard CY, Goya ME, Golombek DA. Regulation of the circadian clock in by clock gene homologs and . Biorxiv : the Preprint Server For Biology. PMID 38105938 DOI: 10.1101/2023.04.13.536481 |
0.339 |
|
| 2023 |
Sharma D, Partch CL. PAS Dimerization at the Nexus of the Mammalian Circadian Clock. Journal of Molecular Biology. 168341. PMID 37924861 DOI: 10.1016/j.jmb.2023.168341 |
0.434 |
|
| 2023 |
Chavan A, Heisler J, Chang YG, Golden SS, Partch CL, LiWang A. Protocols for in vitro reconstitution of the cyanobacterial circadian clock. Biopolymers. e23559. PMID 37421636 DOI: 10.1002/bip.23559 |
0.326 |
|
| 2023 |
Michael AK, Stoos L, Crosby P, Eggers N, Nie XY, Makasheva K, Minnich M, Healy KL, Weiss J, Kempf G, Cavadini S, Kater L, Seebacher J, Vecchia L, Chakraborty D, ... ... Partch CL, et al. Cooperation between bHLH transcription factors and histones for DNA access. Nature. PMID 37407816 DOI: 10.1038/s41586-023-06282-3 |
0.786 |
|
| 2022 |
Swan JA, Sandate CR, Chavan AG, Freeberg AM, Etwaru D, Ernst DC, Palacios JG, Golden SS, LiWang A, Lander GC, Partch CL. Coupling of distant ATPase domains in the circadian clock protein KaiC. Nature Structural & Molecular Biology. PMID 35864165 DOI: 10.1038/s41594-022-00803-w |
0.328 |
|
| 2022 |
Partch C, Brunner M. How circadian clocks keep time: the discovery of slowness. Febs Letters. 596: 1613-1614. PMID 35775878 DOI: 10.1002/1873-3468.14432 |
0.33 |
|
| 2022 |
Koch AA, Bagnall JS, Smyllie NJ, Begley N, Adamson AD, Fribourgh JL, Spiller DG, Meng QJ, Partch CL, Strimmer K, House TA, Hastings MH, Loudon ASI. Quantification of protein abundance and interaction defines a mechanism for operation of the circadian clock. Elife. 11. PMID 35285799 DOI: 10.7554/eLife.73976 |
0.338 |
|
| 2022 |
Smyllie NJ, Bagnall J, Koch AA, Niranjan D, Polidarova L, Chesham JE, Chin JW, Partch CL, Loudon ASI, Hastings MH. Cryptochrome proteins regulate the circadian intracellular behavior and localization of PER2 in mouse suprachiasmatic nucleus neurons. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35046033 DOI: 10.1073/pnas.2113845119 |
0.318 |
|
| 2021 |
Shen Y, Endale M, Wang W, Morris AR, Francey LJ, Harold RL, Hammers DW, Huo Z, Partch CL, Hogenesch JB, Wu ZH, Liu AC. NF-κB modifies the mammalian circadian clock through interaction with the core clock protein BMAL1. Plos Genetics. 17: e1009933. PMID 34807912 DOI: 10.1371/journal.pgen.1009933 |
0.383 |
|
| 2021 |
Chavan AG, Swan JA, Heisler J, Sancar C, Ernst DC, Fang M, Palacios JG, Spangler RK, Bagshaw CR, Tripathi S, Crosby P, Golden SS, Partch CL, LiWang A. Reconstitution of an intact clock reveals mechanisms of circadian timekeeping. Science (New York, N.Y.). 374: eabd4453. PMID 34618577 DOI: 10.1126/science.abd4453 |
0.67 |
|
| 2021 |
Koronowski KB, Greco CM, Huang H, Kim JK, Fribourgh JL, Crosby P, Mathur L, Ren X, Partch CL, Jang C, Qiao F, Zhao Y, Sassone-Corsi P. Ketogenesis impact on liver metabolism revealed by proteomics of lysine β-hydroxybutyrylation. Cell Reports. 36: 109487. PMID 34348140 DOI: 10.1016/j.celrep.2021.109487 |
0.619 |
|
| 2021 |
Philpott JM, Torgrimson MR, Harold RL, Partch CL. Biochemical mechanisms of period control within the mammalian circadian clock. Seminars in Cell & Developmental Biology. PMID 33933351 DOI: 10.1016/j.semcdb.2021.04.012 |
0.34 |
|
| 2020 |
Parico GCG, Partch CL. The tail of cryptochromes: an intrinsically disordered cog within the mammalian circadian clock. Cell Communication and Signaling : Ccs. 18: 182. PMID 33198762 DOI: 10.1186/s12964-020-00665-z |
0.375 |
|
| 2020 |
Parico GCG, Perez I, Fribourgh JL, Hernandez BN, Lee HW, Partch CL. The human CRY1 tail controls circadian timing by regulating its association with CLOCK:BMAL1. Proceedings of the National Academy of Sciences of the United States of America. PMID 33106415 DOI: 10.1073/pnas.1920653117 |
0.399 |
|
| 2020 |
Crosby P, Partch CL. New insights into non-transcriptional regulation of mammalian core clock proteins. Journal of Cell Science. 133. PMID 32934011 DOI: 10.1242/Jcs.241174 |
0.745 |
|
| 2020 |
Fribourgh JL, Srivastava A, Sandate CR, Michael AK, Hsu PL, Rakers C, Nguyen LT, Torgrimson MR, Parico GCG, Tripathi S, Zheng N, Lander GC, Hirota T, Tama F, Partch CL. Dynamics at the serine loop underlie differential affinity of cryptochromes for CLOCK:BMAL1 to control circadian timing. Elife. 9. PMID 32101164 DOI: 10.7554/Elife.55275 |
0.804 |
|
| 2020 |
Philpott JM, Narasimamurthy R, Ricci CG, Freeberg AM, Hunt SR, Yee LE, Pelofsky RS, Tripathi S, Virshup DM, Partch CL. Casein kinase 1 dynamics underlie substrate selectivity and the PER2 circadian phosphoswitch. Elife. 9. PMID 32043967 DOI: 10.7554/Elife.52343 |
0.4 |
|
| 2020 |
Partch CL. Orchestration of Circadian Timing by Macromolecular Protein Assemblies. Journal of Molecular Biology. PMID 31945377 DOI: 10.1016/J.Jmb.2019.12.046 |
0.445 |
|
| 2020 |
Fribourgh JL, Srivastava A, Sandate CR, Michael AK, Hsu PL, Rakers C, Nguyen LT, Torgrimson MR, Parico GCG, Tripathi S, Zheng N, Lander GC, Hirota T, Tama F, Partch CL. Author response: Dynamics at the serine loop underlie differential affinity of cryptochromes for CLOCK:BMAL1 to control circadian timing Elife. DOI: 10.7554/Elife.55275.Sa2 |
0.753 |
|
| 2020 |
Partch CL, Swan JA, Heisler JC, LiWang A. Fold-Switching Sets the Stage for Cooperativity and Competition in the Cyanobacterial Circadian Clock Biophysical Journal. 118: 23a. DOI: 10.1096/Fasebj.2020.34.S1.00246 |
0.303 |
|
| 2020 |
Heisler JC, Swan JA, Chavan AG, Partch CL, LiWang A. Clock Output Serves Dual Purpose of Gene Regulation and Time Keeping Biophysical Journal. 118: 51a. DOI: 10.1016/J.Bpj.2019.11.461 |
0.363 |
|
| 2020 |
Sandate CR, Swan JA, Partch CL, Lander GC. Frozen in Time - How Phosphorylation Induces Conformational Rearrangement in the Circadian AAA+ ATPase KaiC Biophysical Journal. 118: 37a. DOI: 10.1016/J.Bpj.2019.11.382 |
0.318 |
|
| 2018 |
Ceh-Pavia E, Partch CL. Regulating behavior with the flip of a translational switch. Proceedings of the National Academy of Sciences of the United States of America. 115: 13151-13153. PMID 30545908 DOI: 10.1073/Pnas.1819247116 |
0.367 |
|
| 2018 |
Narasimamurthy R, Hunt SR, Lu Y, Fustin JM, Okamura H, Partch CL, Forger DB, Kim JK, Virshup DM. CK1δ/ε protein kinase primes the PER2 circadian phosphoswitch. Proceedings of the National Academy of Sciences of the United States of America. PMID 29784789 DOI: 10.1073/Pnas.1721076115 |
0.35 |
|
| 2018 |
Swan JA, Golden S, LiWang A, Partch CL. Structure, function, and mechanism of the core circadian clock in cyanobacteria. The Journal of Biological Chemistry. PMID 29440392 DOI: 10.1074/Jbc.Tm117.001433 |
0.441 |
|
| 2018 |
Partch CL, Swan J, Heisler J, Golden SS, LiWang A. The time machine: structure-based elucidation of timekeeping mechanisms by the cyanobacterial circadian clock Acta Crystallographica Section a Foundations and Advances. 74: a34-a34. DOI: 10.1107/S0108767318099658 |
0.333 |
|
| 2018 |
Fribourgh JL, Michael AK, Nguyen LT, Partch CL. A Tale of Two CRYS: Identifying the Biochemical Determinants of Thier Differential Regulation of Circadian Timekeeping Biophysical Journal. 114: 63a. DOI: 10.1016/J.Bpj.2017.11.392 |
0.768 |
|
| 2018 |
Hunt SR, Partch CL. Kinetics of Multisite Phosphorylation in the Circadian Clock using Time-Resolved NMR Biophysical Journal. 114: 584a. DOI: 10.1016/J.Bpj.2017.11.3196 |
0.332 |
|
| 2018 |
Carlo Parico G, Perez I, Partch C. Shedding Light on Night Owl Behavior: How the Disordered C-Terminal Tail of CRY1 Modulates Circadian Timekeeping Biophysical Journal. 114: 570a. DOI: 10.1016/J.Bpj.2017.11.3116 |
0.325 |
|
| 2018 |
Ceh Pavia EH, Fribourgh J, Nguyen L, Partch CL. The Role of the CBP Transcriptional Activator in the Circadian Repressive Complex Biophysical Journal. 114: 248a-249a. DOI: 10.1016/J.Bpj.2017.11.1383 |
0.447 |
|
| 2017 |
Fong JC, Rogers A, Michael AK, Parsley NC, Cornell WC, Lin YC, Singh PK, Hartmann R, Drescher K, Vinogradov E, Dietrich LE, Partch CL, Yildiz FH. Structural dynamics of RbmA governs plasticity of Vibrio cholerae biofilms. Elife. 6. PMID 28762945 DOI: 10.7554/Elife.26163 |
0.763 |
|
| 2017 |
Fribourgh JL, Partch CL. Assembly and function of bHLH-PAS complexes. Proceedings of the National Academy of Sciences of the United States of America. PMID 28507151 DOI: 10.1073/Pnas.1705408114 |
0.534 |
|
| 2017 |
Gustafson CL, Parsley NC, Asimgil H, Lee HW, Ahlbach C, Michael AK, Xu H, Williams OL, Davis TL, Liu AC, Partch CL. A Slow Conformational Switch in the BMAL1 Transactivation Domain Modulates Circadian Rhythms. Molecular Cell. PMID 28506462 DOI: 10.1016/J.Molcel.2017.04.011 |
0.805 |
|
| 2017 |
Tseng R, Goularte NF, Chavan A, Luu J, Cohen SE, Chang YG, Heisler J, Li S, Michael AK, Tripathi S, Golden SS, LiWang A, Partch CL. Structural basis of the day-night transition in a bacterial circadian clock. Science (New York, N.Y.). 355: 1174-1180. PMID 28302851 DOI: 10.1126/Science.Aag2516 |
0.767 |
|
| 2017 |
Michael AK, Fribourgh JL, Chelliah Y, Sandate CR, Hura GL, Schneidman-Duhovny D, Tripathi SM, Takahashi JS, Partch CL. Formation of a repressive complex in the mammalian circadian clock is mediated by the secondary pocket of CRY1. Proceedings of the National Academy of Sciences of the United States of America. PMID 28143926 DOI: 10.1073/Pnas.1615310114 |
0.828 |
|
| 2017 |
Fong JC, Rogers A, Michael AK, Parsley NC, Cornell W, Lin Y, Singh PK, Hartmann R, Drescher K, Vinogradov E, Dietrich LE, Partch CL, Yildiz FH. Author response: Structural dynamics of RbmA governs plasticity of Vibrio cholerae biofilms Elife. DOI: 10.7554/Elife.26163.026 |
0.732 |
|
| 2017 |
Parsley N, Lee H, Partch C. 1H, 13C, and 15N chemical shift assignments of the FnIII-2 domain from Vibrio cholerae RbmA Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr27130 |
0.743 |
|
| 2016 |
Michael AK, Fribourgh JL, Van Gelder RN, Partch CL. Animal Cryptochromes: Divergent Roles in Light Perception, Circadian Timekeeping and Beyond. Photochemistry and Photobiology. PMID 27891621 DOI: 10.1111/Php.12677 |
0.772 |
|
| 2016 |
Militi S, Maywood ES, Sandate CR, Chesham JE, Barnard AR, Parsons MJ, Vibert JL, Joynson GM, Partch CL, Hastings MH, Nolan PM. Early doors (Edo) mutant mouse reveals the importance of period 2 (PER2) PAS domain structure for circadian pacemaking. Proceedings of the National Academy of Sciences of the United States of America. PMID 26903623 DOI: 10.1073/Pnas.1517549113 |
0.464 |
|
| 2015 |
Michael AK, Asimgil H, Partch CL. Cytosolic BMAL1 moonlights as a translation factor. Trends in Biochemical Sciences. 40: 489-90. PMID 26256246 DOI: 10.1016/J.Tibs.2015.07.006 |
0.789 |
|
| 2015 |
Xu H, Gustafson CL, Sammons PJ, Khan SK, Parsley NC, Ramanathan C, Lee HW, Liu AC, Partch CL. Cryptochrome 1 regulates the circadian clock through dynamic interactions with the BMAL1 C terminus. Nature Structural & Molecular Biology. 22: 476-84. PMID 25961797 DOI: 10.1038/Nsmb.3018 |
0.823 |
|
| 2015 |
Michael AK, Harvey SL, Sammons PJ, Anderson AP, Kopalle HM, Banham AH, Partch CL. Cancer/Testis Antigen PASD1 Silences the Circadian Clock. Molecular Cell. 58: 743-54. PMID 25936801 DOI: 10.1016/J.Molcel.2015.03.031 |
0.802 |
|
| 2015 |
Huynh K, Partch CL. Analysis of protein stability and ligand interactions by thermal shift assay. Current Protocols in Protein Science / Editorial Board, John E. Coligan ... [Et Al.]. 79: 28.9.1-28.9.14. PMID 25640896 DOI: 10.1002/0471140864.Ps2809S79 |
0.304 |
|
| 2015 |
Guo Y, Scheuermann TH, Partch CL, Tomchick DR, Gardner KH. Coiled-coil coactivators play a structural role mediating interactions in hypoxia-inducible factor heterodimerization. The Journal of Biological Chemistry. 290: 7707-21. PMID 25627682 DOI: 10.1074/Jbc.M114.632786 |
0.788 |
|
| 2015 |
Gustafson CL, Partch CL. Emerging models for the molecular basis of mammalian circadian timing. Biochemistry. 54: 134-49. PMID 25303119 DOI: 10.1021/Bi500731F |
0.512 |
|
| 2014 |
Mukherjee S, Zheng H, Derebe MG, Callenberg KM, Partch CL, Rollins D, Propheter DC, Rizo J, Grabe M, Jiang QX, Hooper LV. Antibacterial membrane attack by a pore-forming intestinal C-type lectin. Nature. 505: 103-7. PMID 24256734 DOI: 10.1038/Nature12729 |
0.303 |
|
| 2014 |
Partch CL, Green CB, Takahashi JS. Molecular architecture of the mammalian circadian clock. Trends in Cell Biology. 24: 90-9. PMID 23916625 DOI: 10.1016/J.Tcb.2013.07.002 |
0.602 |
|
| 2013 |
Guo Y, Partch CL, Key J, Card PB, Pashkov V, Patel A, Bruick RK, Wurdak H, Gardner KH. Regulating the ARNT/TACC3 axis: multiple approaches to manipulating protein/protein interactions with small molecules. Acs Chemical Biology. 8: 626-35. PMID 23240775 DOI: 10.1021/Cb300604U |
0.77 |
|
| 2012 |
Huang N, Chelliah Y, Shan Y, Taylor CA, Yoo SH, Partch C, Green CB, Zhang H, Takahashi JS. Crystal structure of the heterodimeric CLOCK:BMAL1 transcriptional activator complex. Science (New York, N.Y.). 337: 189-94. PMID 22653727 DOI: 10.1126/Science.1222804 |
0.823 |
|
| 2011 |
Partch CL, Gardner KH. Coactivators necessary for transcriptional output of the hypoxia inducible factor, HIF, are directly recruited by ARNT PAS-B. Proceedings of the National Academy of Sciences of the United States of America. 108: 7739-44. PMID 21512126 DOI: 10.1073/Pnas.1101357108 |
0.625 |
|
| 2010 |
Motta-Mena LB, Partch CL, Gardner KH. The three Rs of transcription: recruit, retain, and recycle. Molecular Cell. 40: 855-8. PMID 21172650 DOI: 10.1016/J.Molcel.2010.12.010 |
0.79 |
|
| 2010 |
Lehotzky RE, Partch CL, Mukherjee S, Cash HL, Goldman WE, Gardner KH, Hooper LV. Molecular basis for peptidoglycan recognition by a bactericidal lectin. Proceedings of the National Academy of Sciences of the United States of America. 107: 7722-7. PMID 20382864 DOI: 10.1073/Pnas.0909449107 |
0.527 |
|
| 2010 |
Partch CL, Gardner KH. Coactivator recruitment: a new role for PAS domains in transcriptional regulation by the bHLH-PAS family. Journal of Cellular Physiology. 223: 553-7. PMID 20112293 DOI: 10.1002/Jcp.22067 |
0.654 |
|
| 2009 |
Partch CL, Card PB, Amezcua CA, Gardner KH. Molecular basis of coiled coil coactivator recruitment by the aryl hydrocarbon receptor nuclear translocator (ARNT). The Journal of Biological Chemistry. 284: 15184-92. PMID 19324882 DOI: 10.1074/Jbc.M808479200 |
0.778 |
|
| 2009 |
Mukherjee S, Partch CL, Lehotzky RE, Whitham CV, Chu H, Bevins CL, Gardner KH, Hooper LV. Regulation of C-type lectin antimicrobial activity by a flexible N-terminal prosegment. The Journal of Biological Chemistry. 284: 4881-8. PMID 19095652 DOI: 10.1074/Jbc.M808077200 |
0.581 |
|
| 2008 |
Oztürk N, Kao YT, Selby CP, Kavakli IH, Partch CL, Zhong D, Sancar A. Purification and characterization of a type III photolyase from Caulobacter crescentus. Biochemistry. 47: 10255-61. PMID 18771290 DOI: 10.1021/Bi801085A |
0.526 |
|
| 2007 |
Oztürk N, Song SH, Ozgür S, Selby CP, Morrison L, Partch C, Zhong D, Sancar A. Structure and function of animal cryptochromes. Cold Spring Harbor Symposia On Quantitative Biology. 72: 119-31. PMID 18419269 DOI: 10.1101/Sqb.2007.72.015 |
0.727 |
|
| 2006 |
Huang Y, Baxter R, Smith BS, Partch CL, Colbert CL, Deisenhofer J. Crystal structure of cryptochrome 3 from Arabidopsis thaliana and its implications for photolyase activity. Proceedings of the National Academy of Sciences of the United States of America. 103: 17701-6. PMID 17101984 DOI: 10.1073/Pnas.0608554103 |
0.379 |
|
| 2006 |
Partch CL, Shields KF, Thompson CL, Selby CP, Sancar A. Posttranslational regulation of the mammalian circadian clock by cryptochrome and protein phosphatase 5. Proceedings of the National Academy of Sciences of the United States of America. 103: 10467-72. PMID 16790549 DOI: 10.1073/Pnas.0604138103 |
0.702 |
|
| 2005 |
Partch CL, Sancar A. Photochemistry and photobiology of cryptochrome blue-light photopigments: the search for a photocycle. Photochemistry and Photobiology. 81: 1291-304. PMID 16164372 DOI: 10.1562/2005-07-08-Ir-607 |
0.535 |
|
| 2005 |
Partch CL, Sancar A. Cryptochromes and circadian photoreception in animals. Methods in Enzymology. 393: 726-45. PMID 15817321 DOI: 10.1016/S0076-6879(05)93038-3 |
0.517 |
|
| 2005 |
Partch CL, Clarkson MW, Ozgür S, Lee AL, Sancar A. Role of structural plasticity in signal transduction by the cryptochrome blue-light photoreceptor. Biochemistry. 44: 3795-805. PMID 15751956 DOI: 10.1021/Bi047545G |
0.728 |
|
| 2004 |
Thompson CL, Selby CP, Partch CL, Plante DT, Thresher RJ, Araujo F, Sancar A. Further evidence for the role of cryptochromes in retinohypothalamic photoreception/phototransduction. Brain Research. Molecular Brain Research. 122: 158-66. PMID 15010208 DOI: 10.1016/J.Molbrainres.2003.12.006 |
0.663 |
|
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