Nobuya Koike, PhD - Publications

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37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Han C, Lim JY, Koike N, Kim SY, Ono K, Tran CK, Mangutov E, Kim E, Zhang Y, Li L, Pradhan AA, Yagita K, Chen Z, Yoo SH, Burish MJ. Regulation of headache response and transcriptomic network by the trigeminal ganglion clock. Headache. PMID 38288634 DOI: 10.1111/head.14670  0.533
2023 Benkli B, Kim SY, Koike N, Han C, Tran C, Silva E, Yan Y, Yagita K, Chen Z, Yoo SH, Burish MJ. Circadian Features of Cluster Headache and Migraine: A Systematic Review, Meta-analysis, and Genetic Analysis. Neurology. PMID 36990725 DOI: 10.1212/WNL.0000000000207240  0.468
2023 Mawatari K, Koike N, Nohara K, Wirianto M, Uebanso T, Shimohata T, Shikishima Y, Miura H, Nii Y, Burish MJ, Yagita K, Takahashi A, Yoo SH, Chen Z. The polymethoxyflavone Sudachitin modulates the circadian clock and improves liver physiology. Molecular Nutrition & Food Research. e2200270. PMID 36829302 DOI: 10.1002/mnfr.202200270  0.563
2022 Nakai H, Tsuchiya Y, Koike N, Asano T, Ueno M, Umemura Y, Sasawaki Y, Ono R, Hamuro J, Sotozono C, Yagita K. Comprehensive Analysis Identified the Circadian Clock and Global Circadian Gene Expression in Human Corneal Endothelial Cells. Investigative Ophthalmology & Visual Science. 63: 16. PMID 35579906 DOI: 10.1167/iovs.63.5.16  0.324
2022 Wirianto M, Wang CY, Kim E, Koike N, Gomez-Gutierrez R, Nohara K, Escobedo G, Choi JM, Han C, Yagita K, Jung SY, Soto C, Lee HK, Morales R, Yoo SH, et al. The clock modulator Nobiletin mitigates astrogliosis-associated neuroinflammation and disease hallmarks in an Alzheimer's disease model. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 36: e22186. PMID 35120261 DOI: 10.1096/fj.202101633R  0.578
2022 Umemura Y, Koike N, Tsuchiya Y, Watanabe H, Kondoh G, Kageyama R, Yagita K. Circadian key component CLOCK/BMAL1 interferes with segmentation clock in mouse embryonic organoids. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 34930826 DOI: 10.1073/pnas.2114083119  0.35
2021 Mosig RA, Castaneda AN, Deslauriers JC, Frazier LP, He KL, Maghzian N, Pokharel A, Schrier CT, Zhu L, Koike N, Tyson JJ, Green CB, Takahashi JS, Kojima S. Natural antisense transcript of , regulates the amplitude of the mouse circadian clock. Genes & Development. PMID 34016691 DOI: 10.1101/gad.343541.120  0.6
2020 Kim HK, Lee SY, Koike N, Kim E, Wirianto M, Burish MJ, Yagita K, Lee HK, Chen Z, Chung JM, Abdi S, Yoo SH. Circadian regulation of chemotherapy-induced peripheral neuropathic pain and the underlying transcriptomic landscape. Scientific Reports. 10: 13844. PMID 32796949 DOI: 10.1038/S41598-020-70757-W  0.604
2020 Inokawa H, Umemura Y, Shimba A, Kawakami E, Koike N, Tsuchiya Y, Ohashi M, Minami Y, Cui G, Asahi T, Ono R, Sasawaki Y, Konishi E, Yoo SH, Chen Z, et al. Chronic circadian misalignment accelerates immune senescence and abbreviates lifespan in mice. Scientific Reports. 10: 2569. PMID 32054990 DOI: 10.1038/S41598-020-59541-Y  0.571
2019 Ono R, Koike N, Inokawa H, Tsuchiya Y, Umemura Y, Yamamoto T, Kanamura N, Yagita K. Incremental Growth Lines in Mouse Molar Dentin Represent 8-hr Ultradian Rhythm. Acta Histochemica Et Cytochemica. 52: 93-99. PMID 32001947 DOI: 10.1267/Ahc.19017  0.418
2019 Umemura Y, Maki I, Tsuchiya Y, Koike N, Yagita K. Human Circadian Molecular Oscillation Development Using Induced Pluripotent Stem Cells. Journal of Biological Rhythms. 748730419865436. PMID 31368392 DOI: 10.1177/0748730419865436  0.43
2019 Ikeda R, Tsuchiya Y, Koike N, Umemura Y, Inokawa H, Ono R, Inoue M, Sasawaki Y, Grieten T, Okubo N, Ikoma K, Fujiwara H, Kubo T, Yagita K. REV-ERBα and REV-ERBβ function as key factors regulating Mammalian Circadian Output. Scientific Reports. 9: 10171. PMID 31308426 DOI: 10.1038/S41598-019-46656-0  0.517
2019 Doi M, Shimatani H, Atobe Y, Murai I, Hayashi H, Takahashi Y, Fustin JM, Yamaguchi Y, Kiyonari H, Koike N, Yagita K, Lee C, Abe M, Sakimura K, Okamura H. Non-coding cis-element of Period2 is essential for maintaining organismal circadian behaviour and body temperature rhythmicity. Nature Communications. 10: 2563. PMID 31189882 DOI: 10.1038/S41467-019-10532-2  0.426
2017 Ohashi M, Umemura Y, Koike N, Tsuchiya Y, Inada Y, Watanabe H, Tanaka T, Minami Y, Ukimura O, Miki T, Tajiri T, Kondoh G, Yamada Y, Yagita K. Disruption of circadian clockwork in in vivo reprogramming-induced mouse kidney tumors. Genes to Cells : Devoted to Molecular & Cellular Mechanisms. PMID 29271044 DOI: 10.1111/Gtc.12552  0.425
2017 Hughes ME, Abruzzi KC, Allada R, Anafi R, Arpat AB, Asher G, Baldi P, de Bekker C, Bell-Pedersen D, Blau J, Brown S, Ceriani MF, Chen Z, Chiu JC, Cox J, ... ... Koike N, et al. Guidelines for Genome-Scale Analysis of Biological Rhythms. Journal of Biological Rhythms. 748730417728663. PMID 29098954 DOI: 10.1177/0748730417728663  0.612
2017 Yoo SH, Kojima S, Shimomura K, Koike N, Buhr ED, Furukawa T, Ko CH, Gloston G, Ayoub C, Nohara K, Reyes BA, Tsuchiya Y, Yoo OJ, Yagita K, Lee C, et al. Period2 3'-UTR and microRNA-24 regulate circadian rhythms by repressing PERIOD2 protein accumulation. Proceedings of the National Academy of Sciences of the United States of America. PMID 28973913 DOI: 10.1073/Pnas.1706611114  0.794
2017 Taniguchi M, Carreira MB, Cooper YA, Bobadilla AC, Heinsbroek JA, Koike N, Larson EB, Balmuth EA, Hughes BW, Penrod RD, Kumar J, Smith LN, Guzman D, Takahashi JS, Kim TK, et al. HDAC5 and Its Target Gene, Npas4, Function in the Nucleus Accumbens to Regulate Cocaine-Conditioned Behaviors. Neuron. 96: 130-144.e6. PMID 28957664 DOI: 10.1016/J.Neuron.2017.09.015  0.461
2017 Umemura Y, Koike N, Ohashi M, Tsuchiya Y, Meng QJ, Minami Y, Hara M, Hisatomi M, Yagita K. Involvement of posttranscriptional regulation of Clock in the emergence of circadian clock oscillation during mouse development. Proceedings of the National Academy of Sciences of the United States of America. PMID 28827343 DOI: 10.1073/Pnas.1703170114  0.482
2017 Hara M, Minami Y, Ohashi M, Tsuchiya Y, Kusaba T, Tamagaki K, Koike N, Umemura Y, Inokawa H, Yagita K. Robust circadian clock oscillation and osmotic rhythms in inner medulla reflecting cortico-medullary osmotic gradient rhythm in rodent kidney. Scientific Reports. 7: 7306. PMID 28779094 DOI: 10.1038/S41598-017-07767-8  0.459
2016 He B, Nohara K, Park N, Park YS, Guillory B, Zhao Z, Garcia JM, Koike N, Lee CC, Takahashi JS, Yoo SH, Chen Z. The Small Molecule Nobiletin Targets the Molecular Oscillator to Enhance Circadian Rhythms and Protect against Metabolic Syndrome. Cell Metabolism. 23: 610-21. PMID 27076076 DOI: 10.1016/J.Cmet.2016.03.007  0.779
2015 Hosokawa T, Tsuchiya Y, Okubo N, Kunimoto T, Minami Y, Fujiwara H, Umemura Y, Koike N, Kubo T, Yagita K. Robust Circadian Rhythm and Parathyroid Hormone-Induced Resetting during Hypertrophic Differentiation in ATDC5 Chondroprogenitor Cells. Acta Histochemica Et Cytochemica. 48: 165-71. PMID 26855448 DOI: 10.1267/Ahc.15025  0.487
2015 Wang GZ, Hickey SL, Shi L, Huang HC, Nakashe P, Koike N, Tu BP, Takahashi JS, Konopka G. Cycling Transcriptional Networks Optimize Energy Utilization on a Genome Scale. Cell Reports. 13: 1868-1880. PMID 26655902 DOI: 10.1016/J.Celrep.2015.10.043  0.559
2015 Tsuchiya Y, Umemura Y, Minami Y, Koike N, Hosokawa T, Hara M, Ito H, Inokawa H, Yagita K. Effect of Multiple Clock Gene Ablations on the Circadian Period Length and Temperature Compensation in Mammalian Cells. Journal of Biological Rhythms. PMID 26511603 DOI: 10.1177/0748730415613888  0.51
2015 Jeong K, He B, Nohara K, Park N, Shin Y, Kim S, Shimomura K, Koike N, Yoo SH, Chen Z. Dual attenuation of proteasomal and autophagic BMAL1 degradation in Clock(Δ19/+) mice contributes to improved glucose homeostasis. Scientific Reports. 5: 12801. PMID 26228022 DOI: 10.1038/Srep12801  0.799
2015 Nohara K, Shin Y, Park N, Jeong K, He B, Koike N, Yoo SH, Chen Z. Ammonia-lowering activities and carbamoyl phosphate synthetase 1 (Cps1) induction mechanism of a natural flavonoid. Nutrition & Metabolism. 12: 23. PMID 26075008 DOI: 10.1186/S12986-015-0020-7  0.789
2015 Takahashi JS, Kumar V, Nakashe P, Koike N, Huang HC, Green CB, Kim TK. ChIP-seq and RNA-seq methods to study circadian control of transcription in mammals. Methods in Enzymology. 551: 285-321. PMID 25662462 DOI: 10.1016/Bs.Mie.2014.10.059  0.63
2014 Umemura Y, Koike N, Matsumoto T, Yoo SH, Chen Z, Yasuhara N, Takahashi JS, Yagita K. Transcriptional program of Kpna2/Importin-α2 regulates cellular differentiation-coupled circadian clock development in mammalian cells. Proceedings of the National Academy of Sciences of the United States of America. 111: E5039-48. PMID 25389311 DOI: 10.1073/Pnas.1419272111  0.693
2014 Nangle SN, Rosensweig C, Koike N, Tei H, Takahashi JS, Green CB, Zheng N. Molecular assembly of the period-cryptochrome circadian transcriptional repressor complex. Elife. 3: e03674. PMID 25127877 DOI: 10.7554/Elife.03674  0.635
2014 Inada Y, Uchida H, Umemura Y, Nakamura W, Sakai T, Koike N, Yagita K. Cell and tissue-autonomous development of the circadian clock in mouse embryos. Febs Letters. 588: 459-65. PMID 24374345 DOI: 10.1016/J.Febslet.2013.12.007  0.464
2014 Nangle SN, Rosensweig C, Koike N, Tei H, Takahashi JS, Green CB, Zheng N. Author response: Molecular assembly of the period-cryptochrome circadian transcriptional repressor complex Elife. DOI: 10.7554/Elife.03674.017  0.599
2013 Shimomura K, Kumar V, Koike N, Kim TK, Chong J, Buhr ED, Whiteley AR, Low SS, Omura C, Fenner D, Owens JR, Richards M, Yoo SH, Hong HK, Vitaterna MH, et al. Usf1, a suppressor of the circadian Clock mutant, reveals the nature of the DNA-binding of the CLOCK:BMAL1 complex in mice. Elife. 2: e00426. PMID 23580255 DOI: 10.7554/Elife.00426  0.728
2013 Yoo SH, Mohawk JA, Siepka SM, Shan Y, Huh SK, Hong HK, Kornblum I, Kumar V, Koike N, Xu M, Nussbaum J, Liu X, Chen Z, Chen ZJ, Green CB, et al. Competing E3 ubiquitin ligases govern circadian periodicity by degradation of CRY in nucleus and cytoplasm. Cell. 152: 1091-105. PMID 23452855 DOI: 10.1016/J.Cell.2013.01.055  0.717
2013 Shimomura K, Kumar V, Koike N, Kim T, Chong J, Buhr ED, Whiteley AR, Low SS, Omura C, Fenner D, Owens JR, Richards M, Yoo S, Hong H, Vitaterna MH, et al. Author response: Usf1, a suppressor of the circadian Clock mutant, reveals the nature of the DNA-binding of the CLOCK:BMAL1 complex in mice Elife. DOI: 10.7554/Elife.00426.021  0.727
2012 Koike N, Yoo SH, Huang HC, Kumar V, Lee C, Kim TK, Takahashi JS. Transcriptional architecture and chromatin landscape of the core circadian clock in mammals. Science (New York, N.Y.). 338: 349-54. PMID 22936566 DOI: 10.1126/Science.1226339  0.731
2011 Ogawa Y, Koike N, Kurosawa G, Soga T, Tomita M, Tei H. Positive autoregulation delays the expression phase of mammalian clock gene Per2. Plos One. 6: e18663. PMID 21533189 DOI: 10.1371/Journal.Pone.0018663  0.472
2000 Hida A, Koike N, Hirose M, Hattori M, Sakaki Y, Tei H. The human and mouse Period1 genes: Five well-conserved E-boxes additively contribute to the enhancement of mPer1 transcription Genomics. 65: 224-233. PMID 10857746 DOI: 10.1006/Geno.2000.6166  0.41
1998 Koike N, Hida A, Numano R, Hirose M, Sakaki Y, Tei H. Identification of the mammalian homologues of the Drosophila timeless gene, Timeless1 Febs Letters. 441: 427-431. PMID 9891984 DOI: 10.1016/S0014-5793(98)01597-X  0.356
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