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Jonathan Cooper - Publications

Affiliations: 
School of Life Sciences University of Lincoln UK 
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13/500 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Cooper JJ, Mills DS, China L. Response: Commentary: Remote Electronic Training Aids; Efficacy at Deterring Predatory Behavior in Dogs and Implications for Training and Policy. Frontiers in Veterinary Science. 8: 675005. PMID 33982676 DOI: 10.3389/fvets.2021.675005  0.472
2020 China L, Mills DS, Cooper JJ. Efficacy of Dog Training With and Without Remote Electronic Collars vs. a Focus on Positive Reinforcement. Frontiers in Veterinary Science. 7: 508. PMID 32793652 DOI: 10.3389/Fvets.2020.00508  0.505
2019 Clarke T, Mills D, Cooper J. Exploring the utility of traditional breed group classification as an explanation of problem-solving behavior of the domestic dog (Canis familiaris) Journal of Veterinary Behavior-Clinical Applications and Research. 33: 103-107. DOI: 10.1016/J.Jveb.2019.06.004  0.519
2016 Kasbaoui N, Cooper J, Mills DS, Burman O. Effects of Long-Term Exposure to an Electronic Containment System on the Behaviour and Welfare of Domestic Cats. Plos One. 11: e0162073. PMID 27602572 DOI: 10.1371/Journal.Pone.0162073  0.502
2016 Clarke T, Mills D, Cooper J. “Type” as central to perceptions of breed differences in behavior of domestic dog Society & Animals. 24: 467-485. DOI: 10.1163/15685306-12341422  0.518
2014 Cooper JJ, Cracknell N, Hardiman J, Wright H, Mills D. The welfare consequences and efficacy of training pet dogs with remote electronic training collars in comparison to reward based training. Plos One. 9: e102722. PMID 25184218 DOI: 10.1371/Journal.Pone.0102722  0.507
2010 Ligout S, Wright H, Driel Kv, Gladwell F, Mills DS, Cooper JJ. Reliability of salivary cortisol measures in dogs in training context Journal of Veterinary Behavior-Clinical Applications and Research. 5: 49. DOI: 10.1016/J.Jveb.2009.09.027  0.463
2005 Fukuzawa M, Mills DS, Cooper JJ. The effect of human command phonetic characteristics on auditory cognition in dogs (Canis familiaris). Journal of Comparative Psychology (Washington, D.C. : 1983). 119: 117-20. PMID 15740436 DOI: 10.1037/0735-7036.119.1.117  0.488
2005 Fukuzawa M, Mills DS, Cooper JJ. More than just a word: Non-semantic command variables affect obedience in the domestic dog (Canis familiaris) Applied Animal Behaviour Science. 91: 129-141. DOI: 10.1016/J.Applanim.2004.08.025  0.476
2003 Cooper JJ, Ashton C, Bishop S, West R, Mills DS, Young RJ. Clever hounds: Social cognition in the domestic dog (Canis familiaris) Applied Animal Behaviour Science. 81: 229-244. DOI: 10.1016/S0168-1591(02)00284-8  0.47
2002 Cairns MC, Cooper JJ, Davidson HPB, Mills DS. Association in horses of orosensory characteristics of foods with their post-ingestive consequences Animal Science. 75: 257-265. DOI: 10.1017/S1357729800053017  0.434
2002 McAfee LM, Mills DS, Cooper JJ. The use of mirrors for the control of stereotypic weaving behaviour in the stabled horse Applied Animal Behaviour Science. 78: 159-173. DOI: 10.1016/S0168-1591(02)00086-2  0.455
2000 Mills D, Eckley S, Cooper JJ. Thoroughbred bedding preferences, associated behaviour differences and their implications for equine welfare Animal Science. 70: 95-106. DOI: 10.1017/S1357729800051638  0.445
Low-probability matches (unlikely to be authored by this person)
2001 Mason GJ, Cooper J, Clarebrough C. Frustrations of fur-farmed mink. Nature. 410: 35-6. PMID 11242031 DOI: 10.1038/35065157  0.275
1996 Cooper J, Jackson R. A comparison of the feeding behaviour of sheep in straw yards and on slats Applied Animal Behaviour Science. 49: 99. DOI: 10.1016/0168-1591(96)87691-X  0.262
2016 Chielo LI, Pike T, Cooper J. Ranging Behaviour of Commercial Free-Range Laying Hens. Animals : An Open Access Journal From Mdpi. 6. PMID 27128946 DOI: 10.3390/Ani6050028  0.262
2010 Cooper J. The Behavioural Biology of Dogs, P. Jensen (Ed.). CABI, Wallingford, UK (2007), 288 pp., £35 - €55 - $70 (Paperback), ISBN: 978-1-8459-3187-2 Applied Animal Behaviour Science. 122: 136-138. DOI: 10.1016/J.Applanim.2009.12.001  0.258
2005 Rodenburg TB, Bracke MBM, Berk J, Cooper J, Faure JM, Guémené D, Guy G, Harlander A, Jones T, Knierim U, Kuhnt K, Pingel H, Reiter K, Serviére J, Ruis MAW. Welfare of ducks in European duck husbandry systems Worlds Poultry Science Journal. 61: 633-646. DOI: 10.1079/Wps200575  0.258
2009 Freire R, Buckley P, Cooper J. Effects of different forms of exercise on post inhibitory rebound and unwanted behaviour in stabled horses. Equine Veterinary Journal. 41: 487-492. PMID 19642410 DOI: 10.2746/095777309X383883  0.248
1990 Cooper J. A behavioural analysis of stereotypies in the bank vole (Clethrionomys glareolus) Applied Animal Behaviour Science. 26: 285. DOI: 10.1016/0168-1591(90)90147-6  0.232
1998 Cooper J, Mason G, Raj M. Determination of the aversion of farmed mink (Mustela vison) to carbon dioxide. Veterinary Record. 143: 359-361. PMID 9800303 DOI: 10.1136/Vr.143.13.359  0.219
1997 Cooper JJ, Appleby MC. Motivational aspects of individual variation in response to nestboxes by laying hens Animal Behaviour. 54: 1245-53. PMID 9398377 DOI: 10.1006/anbe.1997.0521  0.192
1997 Mason G, Cooper J, Garner J. Models of motivational decision-making and how they affect the experimental assessment of motivational priorities Bsap Occasional Publication. 20: 9-17. DOI: 10.1017/s0263967x00043329  0.185
2006 Albentosa MJ, Cooper JJ. Testing resource value in group-housed animals: an investigation of cage height preference in laying hens. Behavioural Processes. 70: 113-21. PMID 16102907 DOI: 10.1016/j.beproc.2005.05.002  0.181
1999 Cooper JJ. Comparative learning theory and its application in the training of horses. Equine Veterinary Journal. Supplement. 39-43. PMID 10485003 DOI: 10.1111/J.2042-3306.1998.TB05144.X  0.174
1999 Cooper JJ, Mason GJ. The identification of abnormal behaviour and behavioural problems in stabled horses and their relationship to horse welfare: a comparative review. Equine Veterinary Journal. Supplement. 5-9. PMID 10484995 DOI: 10.1111/J.2042-3306.1998.TB05136.X  0.17
2022 Eaton SL, Murdoch F, Rzechorzek NM, Thompson G, Hartley C, Blacklock BT, Proudfoot C, Lillico SG, Tennant P, Ritchie A, Nixon J, Brennan PM, Guido S, Mitchell NL, Palmer DN, ... ... Cooper JD, et al. Modelling Neurological Diseases in Large Animals: Criteria for Model Selection and Clinical Assessment. Cells. 11. PMID 36078049 DOI: 10.3390/cells11172641  0.143
1996 Cooper JJ, Appleby MC. Demand for nest boxes in laying hens. Behavioural Processes. 36: 171-82. PMID 24896684 DOI: 10.1016/0376-6357(95)00027-5  0.143
2001 Cooper JJ, Mason GJ. The use of operant technology to measure behavioral priorities in captive animals. Behavior Research Methods, Instruments, & Computers : a Journal of the Psychonomic Society, Inc. 33: 427-34. PMID 11591075 DOI: 10.3758/BF03195397  0.142
2022 Ellinwood NM, Valentine BN, Hess AS, Jens JK, Snella EM, Jamil M, Hostetter SJ, Jeffery ND, Smith JD, Millman ST, Parsons RL, Butt MT, Chandra S, Egeland MT, Assis AB, ... ... Cooper JD, et al. Tralesinidase alfa enzyme replacement therapy prevents disease manifestations in a canine model of mucopolysaccharidosis type IIIB. The Journal of Pharmacology and Experimental Therapeutics. PMID 35717448 DOI: 10.1124/jpet.122.001119  0.14
2019 Nelvagal HR, Lange J, Takahashi K, Tarczyluk-Wells MA, Cooper JD. Pathomechanisms in the neuronal ceroid lipofuscinoses. Biochimica Et Biophysica Acta. Molecular Basis of Disease. 165570. PMID 31678162 DOI: 10.1016/j.bbadis.2019.165570  0.137
1994 Cooper J, Emmans G, Friggens N. Effect of Diet on Behaviour of Individually Penned Sheep Proceedings of the British Society of Animal Production (1972). 1994: 55-55. DOI: 10.1017/S0308229600026064  0.136
2001 Cox LN, Cooper JJ. Observations on the pre- and post-weaning behaviour of piglets reared in commercial indoor and outdoor environments Animal Science. 72: 75-86. DOI: 10.1017/S1357729800055570  0.136
2005 Cooper JJ, Albentosa MJ. Behavioural adaptation in the domestic horse: potential role of apparently abnormal responses including stereotypic behaviour Livestock Production Science. 92: 177-182. DOI: 10.1016/J.LIVPRODSCI.2004.11.017  0.134
2020 Egeland MT, Tarczyluk-Wells MM, Asmar MM, Adintori EG, Lawrence R, Snella EM, Jens JK, Crawford BE, Wait JCM, McCullagh E, Pinkstaff J, Cooper JD, Ellinwood NM. Central nervous system pathology in preclinical MPS IIIB dogs reveals progressive changes in clinically relevant brain regions. Scientific Reports. 10: 20365. PMID 33230178 DOI: 10.1038/s41598-020-77032-y  0.134
2019 Tarczyluk-Wells MA, Salzlechner C, Najafi AR, Lim MJ, Smith D, Platt FM, Williams BP, Cooper JD. Combined Anti-inflammatory and Neuroprotective Treatments Have the Potential to Impact Disease Phenotypes in Mice. Frontiers in Neurology. 10: 963. PMID 31572287 DOI: 10.3389/Fneur.2019.00963  0.132
2015 Cooper JD, Tarczyluk MA, Nelvagal HR. Towards a new understanding of NCL pathogenesis. Biochimica Et Biophysica Acta. PMID 26026924 DOI: 10.1016/j.bbadis.2015.05.014  0.129
2015 Vuillemenot BR, Kennedy D, Cooper JD, Wong AM, Sri S, Doeleman T, Katz ML, Coates JR, Johnson GC, Reed RP, Adams EL, Butt MT, Musson DG, Henshaw J, Keve S, et al. Nonclinical evaluation of CNS-administered TPP1 enzyme replacement in canine CLN2 neuronal ceroid lipofuscinosis. Molecular Genetics and Metabolism. 114: 281-93. PMID 25257657 DOI: 10.1016/J.Ymgme.2014.09.004  0.129
2006 Griffey MA, Wozniak D, Wong M, Bible E, Johnson K, Rothman SM, Wentz AE, Cooper JD, Sands MS. CNS-directed AAV2-mediated gene therapy ameliorates functional deficits in a murine model of infantile neuronal ceroid lipofuscinosis. Molecular Therapy : the Journal of the American Society of Gene Therapy. 13: 538-47. PMID 16364693 DOI: 10.1016/J.Ymthe.2005.11.008  0.128
2010 Cooper JD. The neuronal ceroid lipofuscinoses: the same, but different? Biochemical Society Transactions. 38: 1448-52. PMID 21118105 DOI: 10.1042/BST0381448  0.126
1996 Cooper JJ, Appleby MC. Individual variation in prelaying behaviour and the incidence of floor eggs. British Poultry Science. 37: 245-53. PMID 8773834 DOI: 10.1080/00071669608417856  0.122
2024 Takahashi K, Rensing NR, Eultgen EM, Wang SH, Nelvagal HR, Le SQ, Roberts MS, Doray B, Han EB, Dickson PI, Wong M, Sands MS, Cooper JD. GABAergic interneurons contribute to the fatal seizure phenotype of CLN2 disease mice. Biorxiv : the Preprint Server For Biology. PMID 38585903 DOI: 10.1101/2024.03.29.587276  0.12
2022 Liu J, Hein D, Huffman C, Rao BM, Cooper J, Ebraheim NA. Surgical outcomes of non-periprosthetic distal femur fragility fractures treated with a locking plate. Annals of Joint. 7: 32. PMID 38529163 DOI: 10.21037/aoj-22-15  0.12
2004 Mitchison HM, Lim MJ, Cooper JD. Selectivity and types of cell death in the neuronal ceroid lipofuscinoses. Brain Pathology (Zurich, Switzerland). 14: 86-96. PMID 14997941 DOI: 10.1111/j.1750-3639.2004.tb00502.x  0.117
2013 Morgan JP, Magee H, Wong A, Nelson T, Koch B, Cooper JD, Weimer JM. A murine model of variant late infantile ceroid lipofuscinosis recapitulates behavioral and pathological phenotypes of human disease. Plos One. 8: e78694. PMID 24223841 DOI: 10.1371/Journal.Pone.0078694  0.117
2012 Wilkinson FL, Holley RJ, Langford-Smith KJ, Badrinath S, Liao A, Langford-Smith A, Cooper JD, Jones SA, Wraith JE, Wynn RF, Merry CL, Bigger BW. Neuropathology in mouse models of mucopolysaccharidosis type I, IIIA and IIIB. Plos One. 7: e35787. PMID 22558223 DOI: 10.1371/journal.pone.0035787  0.117
2008 Cooper JD. Moving towards therapies for Juvenile Batten disease? Experimental Neurology. 211: 329-331. PMID 18400221 DOI: 10.1016/j.expneurol.2008.02.016  0.115
2015 Lu JY, Nelvagal HR, Wang L, Birnbaum SG, Cooper JD, Hofmann SL. Intrathecal enzyme replacement therapy improves motor function and survival in a preclinical mouse model of infantile neuronal ceroid lipofuscinosis. Molecular Genetics and Metabolism. PMID 25982063 DOI: 10.1016/j.ymgme.2015.05.005  0.115
2022 Austin R, Fowler G, Cooper JJ, Perez Tanchez M, Croxton R, Evans J, Thompson DF. Use of strontium isotope ratios in geolocation of Guatemalan population: Potential role in identification of remains. Journal of Forensic Sciences. PMID 35943118 DOI: 10.1111/1556-4029.15116  0.114
2007 Albentosa MJ, Cooper JJ, Luddem T, Redgate SE, Elson HA, Walker AW. Evaluation of the effects of cage height and stocking density on the behaviour of laying hens in furnished cages British Poultry Science. 48: 1-11. PMID 17364534 DOI: 10.1080/00071660601156479  0.114
2014 Redgate SE, Cooper JJ, Hall S, Eady P, Harris PA. Dietary experience modifies horses' feeding behavior and selection patterns of three macronutrient rich diets. Journal of Animal Science. 92: 1524-30. PMID 24496846 DOI: 10.2527/jas.2012-5579  0.111
2015 Mendez DC, Stover AE, Rangel AD, Brick DJ, Nethercott HE, Torres MA, Khalid O, Wong AM, Cooper JD, Jester JV, Monuki ES, McGuire C, Le SQ, Kan SH, Dickson PI, et al. A novel, long-lived, and highly engraftable immunodeficient mouse model of mucopolysaccharidosis type I. Molecular Therapy. Methods & Clinical Development. 2: 14068. PMID 26052536 DOI: 10.1038/Mtm.2014.68  0.111
2012 Deeming DC, Hodges HR, Cooper JJ. Effect of sight barriers in pens of breeding ring-necked pheasants (Phasianus colchicus): I. Behaviour and welfare. British Poultry Science. 52: 403-14. PMID 21919567 DOI: 10.1080/00071668.2011.590796  0.11
2017 Barrett MP, Cooper JM, Regnault C, Holm SH, Beech JP, Tegenfeldt JO, Hochstetter A. Microfluidics-Based Approaches to the Isolation of African Trypanosomes. Pathogens (Basel, Switzerland). 6. PMID 28981471 DOI: 10.3390/pathogens6040047  0.109
2006 Cooper JD, Russell C, Mitchison HM. Progress towards understanding disease mechanisms in small vertebrate models of neuronal ceroid lipofuscinosis. Biochimica Et Biophysica Acta. 1762: 873-89. PMID 17023146 DOI: 10.1016/j.bbadis.2006.08.002  0.108
2016 Cooper J, Scharm M, Mirams GR. The Cardiac Electrophysiology Web Lab. Biophysical Journal. 110: 292-300. PMID 26789753 DOI: 10.1016/j.bpj.2015.12.012  0.107
2013 Palmer DN, Barry LA, Tyynelä J, Cooper JD. NCL disease mechanisms. Biochimica Et Biophysica Acta. 1832: 1882-93. PMID 23707513 DOI: 10.1016/j.bbadis.2013.05.014  0.106
2023 Sleat DE, Banach-Petrosky W, Larrimore KE, Nemtsova Y, Wiseman JA, Najafi A, Johnson D, Poole TA, Takahashi K, Cooper JD, Lobel P. A mouse mutant deficient in both neuronal ceroid lipofuscinosis-associated proteins CLN3 and TPP1. Journal of Inherited Metabolic Disease. PMID 37078466 DOI: 10.1002/jimd.12619  0.106
2009 Macauley SL, Wozniak DF, Kielar C, Tan Y, Cooper JD, Sands MS. Cerebellar pathology and motor deficits in the palmitoyl protein thioesterase 1-deficient mouse. Experimental Neurology. 217: 124-35. PMID 19416667 DOI: 10.1016/j.expneurol.2009.01.022  0.106
1993 Cooper JJ, Nicol CJ. The 'coping' hypothesis of stereotypic behaviour: a reply to Rushen Animal Behaviour. 45: 616-618. DOI: 10.1006/anbe.1993.1072  0.106
2022 Ge Y, Taha A, Shah SA, Dashtipour K, Zhu S, Cooper JM, Abbasi Q, Imran M. Contactless WiFi Sensing and Monitoring for Future Healthcare - Emerging Trends, Challenges and Opportunities. Ieee Reviews in Biomedical Engineering. PMID 35254990 DOI: 10.1109/RBME.2022.3156810  0.105
2014 Grubman A, Pollari E, Duncan C, Caragounis A, Blom T, Volitakis I, Wong A, Cooper J, Crouch PJ, Koistinaho J, Jalanko A, White AR, Kanninen KM. Deregulation of biometal homeostasis: the missing link for neuronal ceroid lipofuscinoses? Metallomics : Integrated Biometal Science. 6: 932-43. PMID 24804307 DOI: 10.1039/C4Mt00032C  0.105
2003 Cooper JJ, Albentosa MJ. Behavioural Priorities of Laying Hens Avian and Poultry Biology Reviews. 14: 127-149. DOI: 10.3184/147020603783637508  0.105
2015 Knapp B, Bardenet R, Bernabeu MO, Bordas R, Bruna M, Calderhead B, Cooper J, Fletcher AG, Groen D, Kuijper B, Lewis J, McInerny G, Minssen T, Osborne J, Paulitschke V, et al. Ten simple rules for a successful cross-disciplinary collaboration. Plos Computational Biology. 11: e1004214. PMID 25928184 DOI: 10.1371/Journal.Pcbi.1004214  0.105
2010 Garny A, Cooper J, Hunter PJ. Toward a VPH/Physiome ToolKit. Wiley Interdisciplinary Reviews. Systems Biology and Medicine. 2: 134-47. PMID 20836018 DOI: 10.1002/Wsbm.63  0.104
2012 Kuronen M, Lehesjoki AE, Jalanko A, Cooper JD, Kopra O. Selective spatiotemporal patterns of glial activation and neuron loss in the sensory thalamocortical pathways of neuronal ceroid lipofuscinosis 8 mice. Neurobiology of Disease. 47: 444-57. PMID 22569358 DOI: 10.1016/J.Nbd.2012.04.018  0.104
2013 Mahmood F, Fu S, Cooke J, Wilson SW, Cooper JD, Russell C. A zebrafish model of CLN2 disease is deficient in tripeptidyl peptidase 1 and displays progressive neurodegeneration accompanied by a reduction in proliferation. Brain : a Journal of Neurology. 136: 1488-507. PMID 23587805 DOI: 10.1093/Brain/Awt043  0.103
2015 Cismondi IA, Kohan R, Adams H, Bond M, Brown R, Cooper JD, de Hidalgo PK, Holthaus SK, Mole SE, Mugnaini J, de Ramirez AM, Pesaola F, Rautenberg G, Platt FM, de Halac IN. Guidelines for incorporating scientific knowledge and practice on rare diseases into higher education: neuronal ceroid lipofuscinoses as a model disorder. Biochimica Et Biophysica Acta. PMID 26117801 DOI: 10.1016/J.Bbadis.2015.06.018  0.103
2018 Niemir N, Rouvière L, Besse A, Vanier MT, Dmytrus J, Marais T, Astord S, Puech JP, Panasyuk G, Cooper JD, Barkats M, Caillaud C. Intravenous administration of scAAV9-Hexb normalizes lifespan and prevents pathology in Sandhoff disease mice. Human Molecular Genetics. PMID 29325092 DOI: 10.1093/hmg/ddy012  0.103
2022 Takahashi K, Nelvagal HR, Lange J, Cooper JD. Glial Dysfunction and Its Contribution to the Pathogenesis of the Neuronal Ceroid Lipofuscinoses. Frontiers in Neurology. 13: 886567. PMID 35444603 DOI: 10.3389/fneur.2022.886567  0.101
1991 Cooper JJ, Nicol CJ. Stereotypic behaviour affects environmental preference in bank voles, Clethrionomys glareolus Animal Behaviour. 41: 971-977. DOI: 10.1016/S0003-3472(05)80635-9  0.101
2014 Grishchuk Y, Sri S, Rudinskiy N, Ma W, Stember KG, Cottle MW, Sapp E, Difiglia M, Muzikansky A, Betensky RA, Wong AM, Bacskai BJ, Hyman BT, Kelleher RJ, Cooper JD, et al. Behavioral deficits, early gliosis, dysmyelination and synaptic dysfunction in a mouse model of mucolipidosis IV. Acta Neuropathologica Communications. 2: 133. PMID 25200117 DOI: 10.1186/S40478-014-0133-7  0.101
2004 Pontikis CC, Cella CV, Parihar N, Lim MJ, Chakrabarti S, Mitchison HM, Mobley WC, Rezaie P, Pearce DA, Cooper JD. Late onset neurodegeneration in the Cln3-/- mouse model of juvenile neuronal ceroid lipofuscinosis is preceded by low level glial activation. Brain Research. 1023: 231-42. PMID 15374749 DOI: 10.1016/J.Brainres.2004.07.030  0.1
2003 Cooper JD. Progress towards understanding the neurobiology of Batten disease or neuronal ceroid lipofuscinosis Current Opinion in Neurology. 16: 121-128. PMID 12644737 DOI: 10.1097/00019052-200304000-00001  0.1
2004 Tyynelä J, Cooper JD, Khan MN, Shemilts SJ, Haltia M. Hippocampal pathology in the human neuronal ceroid-lipofuscinoses: distinct patterns of storage deposition, neurodegeneration and glial activation. Brain Pathology (Zurich, Switzerland). 14: 349-57. PMID 15605981 DOI: 10.1111/J.1750-3639.2004.Tb00077.X  0.1
1995 Cooper JJ, Appleby MC. Nesting behaviour of hens: Effects of experience on motivation Applied Animal Behaviour Science. 42: 283-295. DOI: 10.1016/0168-1591(94)00543-N  0.1
1996 Cooper JJ, Ödberg F, Nicol CJ. Limitations on the effectiveness of environmental improvement in reducing stereotypic behaviour in bank voles (Clethrionomys glareolus) Applied Animal Behaviour Science. 48: 237-248. DOI: 10.1016/0168-1591(95)01020-3  0.099
2016 Fietz M, AlSayed M, Burke D, Cohen-Pfeffer J, Cooper JD, Dvořáková L, Giugliani R, Izzo E, Jahnová H, Lukacs Z, Mole SE, Noher de Halac I, Pearce DA, Poupetova H, Schulz A, et al. Diagnosis of neuronal ceroid lipofuscinosis type 2 (CLN2 disease): Expert recommendations for early detection and laboratory diagnosis. Molecular Genetics and Metabolism. PMID 27553878 DOI: 10.1016/J.Ymgme.2016.07.011  0.098
2013 Blom T, Schmiedt ML, Wong AM, Kyttälä A, Soronen J, Jauhiainen M, Tyynelä J, Cooper JD, Jalanko A. Exacerbated neuronal ceroid lipofuscinosis phenotype in Cln1/5 double-knockout mice. Disease Models & Mechanisms. 6: 342-57. PMID 23065637 DOI: 10.1242/dmm.010140  0.098
2012 Hu J, Lu JY, Wong AM, Hynan LS, Birnbaum SG, Yilmaz DS, Streit BM, Lenartowicz EM, Thompson TC, Cooper JD, Hofmann SL. Intravenous high-dose enzyme replacement therapy with recombinant palmitoyl-protein thioesterase reduces visceral lysosomal storage and modestly prolongs survival in a preclinical mouse model of infantile neuronal ceroid lipofuscinosis. Molecular Genetics and Metabolism. 107: 213-21. PMID 22704978 DOI: 10.1016/j.ymgme.2012.05.009  0.098
2016 Aldrich A, Bosch ME, Fallet R, Odvody J, Burkovetskaya M, Rama Rao KV, Cooper JD, Drack AV, Kielian T. Efficacy of phosphodiesterase-4 inhibitors in juvenile Batten disease (CLN3). Annals of Neurology. PMID 27804148 DOI: 10.1002/Ana.24815  0.096
2019 Reboud J, Xu G, Garrett A, Adriko M, Yang Z, Tukahebwa EM, Rowell C, Cooper JM. Paper-based microfluidics for DNA diagnostics of malaria in low resource underserved rural communities. Proceedings of the National Academy of Sciences of the United States of America. PMID 30782834 DOI: 10.1073/pnas.1812296116  0.096
2008 Chang M, Cooper JD, Sleat DE, Cheng SH, Dodge JC, Passini MA, Lobel P, Davidson BL. Intraventricular enzyme replacement improves disease phenotypes in a mouse model of late infantile neuronal ceroid lipofuscinosis. Molecular Therapy : the Journal of the American Society of Gene Therapy. 16: 649-56. PMID 18362923 DOI: 10.1038/Mt.2008.9  0.096
2013 Mitchell JC, McGoldrick P, Vance C, Hortobagyi T, Sreedharan J, Rogelj B, Tudor EL, Smith BN, Klasen C, Miller CC, Cooper JD, Greensmith L, Shaw CE. Overexpression of human wild-type FUS causes progressive motor neuron degeneration in an age- and dose-dependent fashion. Acta Neuropathologica. 125: 273-88. PMID 22961620 DOI: 10.1007/S00401-012-1043-Z  0.096
2012 Pressey SN, Smith DA, Wong AM, Platt FM, Cooper JD. Early glial activation, synaptic changes and axonal pathology in the thalamocortical system of Niemann-Pick type C1 mice. Neurobiology of Disease. 45: 1086-100. PMID 22198570 DOI: 10.1016/j.nbd.2011.12.027  0.095
2023 Takahashi K, Eultgen EM, Wang SH, Rensing NR, Nelvagal HR, Dearborn JT, Danos O, Buss N, Sands MS, Wong M, Cooper JD. Gene therapy ameliorates spontaneous seizures associated with cortical neuron loss in a Cln2R207X mouse model. The Journal of Clinical Investigation. PMID 37104037 DOI: 10.1172/JCI165908  0.095
2009 Weimer JM, Benedict JW, Getty AL, Pontikis CC, Lim MJ, Cooper JD, Pearce DA. Cerebellar defects in a mouse model of juvenile neuronal ceroid lipofuscinosis. Brain Research. 1266: 93-107. PMID 19230832 DOI: 10.1016/J.Brainres.2009.02.009  0.094
2016 Wager K, Zdebik AA, Fu S, Cooper JD, Harvey RJ, Russell C. Neurodegeneration and Epilepsy in a Zebrafish Model of CLN3 Disease (Batten Disease). Plos One. 11: e0157365. PMID 27327661 DOI: 10.1371/journal.pone.0157365  0.094
2004 Bible E, Gupta P, Hofmann SL, Cooper JD. Regional and cellular neuropathology in the palmitoyl protein thioesterase-1 null mutant mouse model of infantile neuronal ceroid lipofuscinosis. Neurobiology of Disease. 16: 346-59. PMID 15193291 DOI: 10.1016/j.nbd.2004.02.010  0.094
2011 Kovács AD, Saje A, Wong A, Szénási G, Kiricsi P, Szabó E, Cooper JD, Pearce DA. Temporary inhibition of AMPA receptors induces a prolonged improvement of motor performance in a mouse model of juvenile Batten disease. Neuropharmacology. 60: 405-9. PMID 20971125 DOI: 10.1016/j.neuropharm.2010.10.010  0.094
2013 Hawkins-Salsbury JA, Cooper JD, Sands MS. Pathogenesis and therapies for infantile neuronal ceroid lipofuscinosis (infantile CLN1 disease). Biochimica Et Biophysica Acta. 1832: 1906-9. PMID 23747979 DOI: 10.1016/j.bbadis.2013.05.026  0.094
2012 Tegelberg S, Kopra O, Joensuu T, Cooper JD, Lehesjoki AE. Early microglial activation precedes neuronal loss in the brain of the Cstb-/- mouse model of progressive myoclonus epilepsy, EPM1. Journal of Neuropathology and Experimental Neurology. 71: 40-53. PMID 22157618 DOI: 10.1097/Nen.0B013E31823E68E1  0.094
2008 von Schantz C, Saharinen J, Kopra O, Cooper JD, Gentile M, Hovatta I, Peltonen L, Jalanko A. Brain gene expression profiles of Cln1 and Cln5 deficient mice unravels common molecular pathways underlying neuronal degeneration in NCL diseases. Bmc Genomics. 9: 146. PMID 18371231 DOI: 10.1186/1471-2164-9-146  0.093
2007 Klauke N, Smith GL, Cooper JM. Microfluidic partitioning of the extracellular space around single cardiac myocytes. Analytical Chemistry. 79: 1205-12. PMID 17263355 DOI: 10.1021/Ac061547K  0.093
2009 Bukhatwa S, Iravani MM, Zeng BY, Cooper JD, Rose S, Jenner P. An immunohistochemical and stereological analysis of PSI-induced nigral neuronal degeneration in the rat. Journal of Neurochemistry. 109: 52-9. PMID 19187437 DOI: 10.1111/J.1471-4159.2009.05956.X  0.093
2008 Garny A, Nickerson DP, Cooper J, Weber dos Santos R, Miller AK, McKeever S, Nielsen PM, Hunter PJ. CellML and associated tools and techniques. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 366: 3017-43. PMID 18579471 DOI: 10.1098/Rsta.2008.0094  0.093
1994 Cooper JJ, Appleby MC. Individual variation in hens' pre-laying behaviour and the incidence of floor eggs Applied Animal Behaviour Science. 41: 271. DOI: 10.1016/0168-1591(94)90032-9  0.092
2021 Hendrix M, Clerx M, Tamuri AU, Keating SM, Johnstone RH, Cooper J, Mirams GR. chaste codegen: automatic CellML to C++ code generation with fixes for singularities and automatically generated Jacobians. Wellcome Open Research. 6: 261. PMID 35299708 DOI: 10.12688/wellcomeopenres.17206.1  0.092
2012 Deeming DC, Hodges HR, Cooper JJ. Effect of sight barriers in pens of breeding ring-necked pheasants (Phasianus colchicus) II. Reproductive parameters. British Poultry Science. 52: 415-22. PMID 21919568 DOI: 10.1080/00071668.2011.587182  0.091
2011 Farfel-Becker T, Vitner EB, Pressey SN, Eilam R, Cooper JD, Futerman AH. Spatial and temporal correlation between neuron loss and neuroinflammation in a mouse model of neuronopathic Gaucher disease. Human Molecular Genetics. 20: 1375-86. PMID 21252206 DOI: 10.1093/Hmg/Ddr019  0.091
2012 Khoshmanesh K, Akagi J, Hall CJ, Crosier KE, Crosier PS, Cooper JM, Wlodkowic D. New rationale for large metazoan embryo manipulations on chip-based devices. Biomicrofluidics. 6: 24102-2410214. PMID 22655014 DOI: 10.1063/1.3699971  0.091
2020 Karda R, Rahim AA, Wong AMS, Suff N, Diaz JA, Perocheau DP, Tijani M, Ng J, Baruteau J, Martin NP, Hughes M, Delhove JMKM, Counsell JR, Cooper JD, Henckaerts E, et al. Generation of light-producing somatic-transgenic mice using adeno-associated virus vectors. Scientific Reports. 10: 2121. PMID 32034258 DOI: 10.1038/s41598-020-59075-3  0.091
2011 Cooper J, Mirams GR, Niederer SA. High-throughput functional curation of cellular electrophysiology models. Progress in Biophysics and Molecular Biology. 107: 11-20. PMID 21704062 DOI: 10.1016/j.pbiomolbio.2011.06.003  0.09
2014 Sondhi D, Scott EC, Chen A, Hackett NR, Wong AM, Kubiak A, Nelvagal HR, Pearse Y, Cotman SL, Cooper JD, Crystal RG. Partial correction of the CNS lysosomal storage defect in a mouse model of juvenile neuronal ceroid lipofuscinosis by neonatal CNS administration of an adeno-associated virus serotype rh.10 vector expressing the human CLN3 gene. Human Gene Therapy. 25: 223-39. PMID 24372003 DOI: 10.1089/Hum.2012.253  0.089
2013 Simó S, Cooper JA. Rbx2 regulates neuronal migration through different cullin 5-RING ligase adaptors. Developmental Cell. 27: 399-411. PMID 24210661 DOI: 10.1016/j.devcel.2013.09.022  0.089
2017 Parviainen L, Dihanich S, Anderson GW, Wong AM, Brooks HR, Abeti R, Rezaie P, Lalli G, Pope S, Heales SJ, Mitchison HM, Williams BP, Cooper JD. Glial cells are functionally impaired in juvenile neuronal ceroid lipofuscinosis and detrimental to neurons. Acta Neuropathologica Communications. 5: 74. PMID 29041969 DOI: 10.1186/S40478-017-0476-Y  0.089
2012 Thelen M, Damme M, Da??e M, Schweizer M, Hagel C, Wong AM, Cooper JD, Braulke T, Galliciotti G. Disruption of the autophagy-lysosome pathway is involved in neuropathology of the nclf mouse model of neuronal ceroid lipofuscinosis. Plos One. 7: e35493. PMID 22536393 DOI: 10.1371/journal.pone.0035493  0.089
2017 Llavero Hurtado M, Fuller HR, Wong AMS, Eaton SL, Gillingwater TH, Pennetta G, Cooper JD, Wishart TM. Proteomic mapping of differentially vulnerable pre-synaptic populations identifies regulators of neuronal stability in vivo. Scientific Reports. 7: 12412. PMID 28963550 DOI: 10.1038/s41598-017-12603-0  0.089
2002 Herrick TM, Cooper JA. A hypomorphic allele of dab1 reveals regional differences in reelin-Dab1 signaling during brain development. Development (Cambridge, England). 129: 787-96. PMID 11830577 DOI: 10.1242/dev.129.3.787  0.089
2018 Yang Z, Xu G, Reboud J, Ali SA, Kaur G, McGiven J, Boby N, Gupta P, Chaudhuri P, Cooper JM. Rapid Veterinary Diagnosis of Bovine Reproductive Infectious Diseases from Semen using Paper-Origami DNA Microfluidics. Acs Sensors. PMID 29322764 DOI: 10.1021/acssensors.7b00825  0.089
2018 Bennett M, Cantini M, Reboud J, Cooper JM, Roca-Cusachs P, Salmeron-Sanchez M. Molecular clutch drives cell response to surface viscosity. Proceedings of the National Academy of Sciences of the United States of America. PMID 29358406 DOI: 10.1073/pnas.1710653115  0.089
2018 Daly AC, Clerx M, Beattie KA, Cooper J, Gavaghan DJ, Mirams GR. Reproducible model development in the cardiac electrophysiology Web Lab. Progress in Biophysics and Molecular Biology. PMID 29842853 DOI: 10.1016/j.pbiomolbio.2018.05.011  0.089
2003 Heine C, Tyynelä J, Cooper JD, Palmer DN, Elleder M, Kohlschütter A, Braulke T. Enhanced expression of manganese-dependent superoxide dismutase in human and sheep CLN6 tissues. The Biochemical Journal. 376: 369-76. PMID 12946273 DOI: 10.1042/BJ20030598  0.088
2018 Cox LL, Cox TC, Moreno Uribe LM, Zhu Y, Richter CT, Nidey N, Standley JM, Deng M, Blue E, Chong JX, Yang Y, Carstens RP, Anand D, Lachke SA, Smith JD, ... ... Cooper JA, et al. Mutations in the Epithelial Cadherin-p120-Catenin Complex Cause Mendelian Non-Syndromic Cleft Lip with or without Cleft Palate. American Journal of Human Genetics. PMID 29805042 DOI: 10.1016/J.Ajhg.2018.04.009  0.088
2022 Chhetri I, Hunt JEA, Mendis JR, Forni LG, Kirk-Bayley J, White I, Cooper J, Somasundaram K, Shah N, Patterson SD, Puthucheary ZA, Montgomery HE, Creagh-Brown BC. Safety and Feasibility Assessment of Repetitive Vascular Occlusion Stimulus (RVOS) Application to Multi-Organ Failure Critically Ill Patients: A Pilot Randomised Controlled Trial. Journal of Clinical Medicine. 11. PMID 35887701 DOI: 10.3390/jcm11143938  0.088
2014 Bergmann FT, Adams R, Moodie S, Cooper J, Glont M, Golebiewski M, Hucka M, Laibe C, Miller AK, Nickerson DP, Olivier BG, Rodriguez N, Sauro HM, Scharm M, Soiland-Reyes S, et al. COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project. Bmc Bioinformatics. 15: 369. PMID 25494900 DOI: 10.1186/S12859-014-0369-Z  0.087
2023 Ge Y, Tang C, Li H, Chen Z, Wang J, Li W, Cooper J, Chetty K, Faccio D, Imran M, Abbasi QH. A comprehensive multimodal dataset for contactless lip reading and acoustic analysis. Scientific Data. 10: 895. PMID 38092796 DOI: 10.1038/s41597-023-02793-w  0.087
2016 Crum WR, Sawiak SJ, Chege W, Cooper JD, C R Williams S, Vernon AC. Evolution of structural abnormalities in the rat brain following in utero exposure to maternal immune activation: a longitudinal in vivo MRI study. Brain, Behavior, and Immunity. PMID 27940258 DOI: 10.1016/J.Bbi.2016.12.008  0.087
2022 Nelvagal HR, Eaton SL, Wang SH, Eultgen EM, Takahashi K, Le SQ, Nesbitt R, Dearborn JT, Siano N, Puhl AC, Dickson PI, Thompson G, Murdoch F, Brennan PM, Gray M, ... ... Cooper JD, et al. Cross-species efficacy of enzyme replacement therapy for CLN1 disease in mice and sheep. The Journal of Clinical Investigation. PMID 36040802 DOI: 10.1172/JCI163107  0.087
2002 Sandison ME, Anicet N, Glidle A, Cooper JM. Optimization of the geometry and porosity of microelectrode arrays for sensor design. Analytical Chemistry. 74: 5717-25. PMID 12463354 DOI: 10.1021/ac025649w  0.087
2023 de Almeida JG, Gudgin E, Besser M, Dunn WG, Cooper J, Haferlach T, Vassiliou GS, Gerstung M. Computational analysis of peripheral blood smears detects disease-associated cytomorphologies. Nature Communications. 14: 4378. PMID 37474506 DOI: 10.1038/s41467-023-39676-y  0.087
2010 Wlodkowic D, Cooper JM. Microfluidic cell arrays in tumor analysis: New prospects for integrated cytomics Expert Review of Molecular Diagnostics. 10: 521-530. PMID 20465506 DOI: 10.1586/erm.10.28  0.087
2017 Cooper JM, Ou YH, McMillan E, Vaden RM, Zaman A, Bodemann BO, Makkar G, Posner BA, White M. TBK1 Provides Context-Selective Support of the Activated AKT/mTOR Pathway in Lung Cancer. Cancer Research. PMID 28716898 DOI: 10.1158/0008-5472.CAN-17-0829  0.086
2006 Kay GW, Palmer DN, Rezaie P, Cooper JD. Activation of non-neuronal cells within the prenatal developing brain of sheep with neuronal ceroid lipofuscinosis. Brain Pathology (Zurich, Switzerland). 16: 110-6. PMID 16768750 DOI: 10.1111/j.1750-3639.2006.00002.x  0.086
2017 Pal D, Boby N, Kumar S, Kaur G, Ali SA, Reboud J, Shrivastava S, Gupta PK, Cooper JM, Chaudhuri P. Visual detection of Brucella in bovine biological samples using DNA-activated gold nanoparticles. Plos One. 12: e0180919. PMID 28719613 DOI: 10.1371/journal.pone.0180919  0.086
2022 Ochoa-Gutierrez V, Guerrero-Zuñiga S, Reboud J, Pazmino-Betancourth M, Harvey AR, Cooper JM. Changes in Oxygenation Levels During Moderate Altitude Simulation (Hypoxia-Induced): A Pilot Study Investigating the Impact of Skin Pigmentation in Pulse Oximetry. Advances in Experimental Medicine and Biology. 1395: 391-396. PMID 36527668 DOI: 10.1007/978-3-031-14190-4_64  0.086
2012 Akagi J, Khoshmanesh K, Evans B, Hall CJ, Crosier KE, Cooper JM, Crosier PS, Wlodkowic D. Miniaturized embryo array for automated trapping, immobilization and microperfusion of zebrafish embryos. Plos One. 7: e36630. PMID 22606275 DOI: 10.1371/journal.pone.0036630  0.086
2021 Witkowska McConnell W, Davis C, Sabir SR, Garrett A, Bradley-Stewart A, Jajesniak P, Reboud J, Xu G, Yang Z, Gunson R, Thomson EC, Cooper JM. Paper microfluidic implementation of loop mediated isothermal amplification for early diagnosis of hepatitis C virus. Nature Communications. 12: 6994. PMID 34848705 DOI: 10.1038/s41467-021-27076-z  0.086
2017 Daly AC, Cooper J, Gavaghan DJ, Holmes C. Comparing two sequential Monte Carlo samplers for exact and approximate Bayesian inference on biological models. Journal of the Royal Society, Interface. 14. PMID 28931636 DOI: 10.1098/rsif.2017.0340  0.086
2013 Smith KR, Dahl HH, Canafoglia L, Andermann E, Damiano J, Morbin M, Bruni AC, Giaccone G, Cossette P, Saftig P, Grötzinger J, Schwake M, Andermann F, Staropoli JF, Sims KB, ... ... Cooper JD, et al. Cathepsin F mutations cause Type B Kufs disease, an adult-onset neuronal ceroid lipofuscinosis. Human Molecular Genetics. 22: 1417-23. PMID 23297359 DOI: 10.1093/Hmg/Dds558  0.085
2014 Osborne JM, Bernabeu MO, Bruna M, Calderhead B, Cooper J, Dalchau N, Dunn SJ, Fletcher AG, Freeman R, Groen D, Knapp B, McInerny GJ, Mirams GR, Pitt-Francis J, Sengupta B, et al. Ten simple rules for effective computational research. Plos Computational Biology. 10: e1003506. PMID 24675742 DOI: 10.1371/Journal.Pcbi.1003506  0.085
2002 Keir R, Igata E, Arundell M, Smith WE, Graham D, McHugh C, Cooper JM. SERRS. In situ substrate formation and improved detection using microfluidics. Analytical Chemistry. 74: 1503-8. PMID 12033237  0.085
2011 Cooper J, Corrias A, Gavaghan D, Noble D. Considerations for the use of cellular electrophysiology models within cardiac tissue simulations. Progress in Biophysics and Molecular Biology. 107: 74-80. PMID 21703295 DOI: 10.1016/j.pbiomolbio.2011.06.002  0.085
2012 Kovács AD, Saje A, Wong A, Ramji S, Cooper JD, Pearce DA. Age-dependent therapeutic effect of memantine in a mouse model of juvenile Batten disease. Neuropharmacology. 63: 769-75. PMID 22683643 DOI: 10.1016/j.neuropharm.2012.05.040  0.085
2018 Mole SE, Anderson G, Band HA, Berkovic SF, Cooper JD, Kleine Holthaus SM, McKay TR, Medina DL, Rahim AA, Schulz A, Smith AJ. Clinical challenges and future therapeutic approaches for neuronal ceroid lipofuscinosis. The Lancet. Neurology. PMID 30470609 DOI: 10.1016/S1474-4422(18)30368-5  0.085
2011 Rahim AA, Wong AM, Hoefer K, Buckley SM, Mattar CN, Cheng SH, Chan JK, Cooper JD, Waddington SN. Intravenous administration of AAV2/9 to the fetal and neonatal mouse leads to differential targeting of CNS cell types and extensive transduction of the nervous system. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 25: 3505-18. PMID 21746868 DOI: 10.1096/fj.11-182311  0.085
2021 Takahashi K, Le SQ, Kan SH, Jansen MJ, Dickson PI, Cooper JD. Neuropathology of murine Sanfilippo D syndrome. Molecular Genetics and Metabolism. 134: 323-329. PMID 34844863 DOI: 10.1016/j.ymgme.2021.11.010  0.084
2009 Wlodkowic D, Skommer J, Faley S, Darzynkiewicz Z, Cooper JM. Dynamic analysis of apoptosis using cyanine SYTO probes: From classical to microfluidic cytometry Experimental Cell Research. 315: 1706-1714. PMID 19298813 DOI: 10.1016/J.Yexcr.2009.03.006  0.084
2012 Roberts MS, Macauley SL, Wong AM, Yilmas D, Hohm S, Cooper JD, Sands MS. Combination small molecule PPT1 mimetic and CNS-directed gene therapy as a treatment for infantile neuronal ceroid lipofuscinosis. Journal of Inherited Metabolic Disease. 35: 847-57. PMID 22310926 DOI: 10.1007/s10545-011-9446-x  0.084
2012 Reboud J, Bourquin Y, Wilson R, Pall GS, Jiwaji M, Pitt AR, Graham A, Waters AP, Cooper JM. Shaping acoustic fields as a toolset for microfluidic manipulations in diagnostic technologies. Proceedings of the National Academy of Sciences of the United States of America. 109: 15162-7. PMID 22949692 DOI: 10.1073/pnas.1206055109  0.084
2019 Ivleva VB, Cooper JW, Arnold FJ, Lei QP. Overcoming Challenges in Structural Characterization of HIV-1 Envelope Glycoprotein by LC-MS/MS. Journal of the American Society For Mass Spectrometry. PMID 31111416 DOI: 10.1007/s13361-019-02225-3  0.084
2019 Cai CX, Schneck NA, Harris D, Blackstock D, Ivleva VB, Cheng KC, Charlton A, Arnold FJ, Cooper JW, Lei QP. Quantification of residual AEBSF-related impurities by reversed-phase liquid chromatography. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 1116: 19-23. PMID 30953918 DOI: 10.1016/j.jchromb.2019.03.022  0.084
2021 White KA, Nelvagal HR, Poole TA, Lu B, Johnson TB, Davis S, Pratt MA, Brudvig J, Assis AB, Likhite S, Meyer K, Kaspar BK, Cooper JD, Wang S, Weimer JM. Intracranial delivery of AAV9 gene therapy partially prevents retinal degeneration and visual deficits in CLN6-Batten disease mice. Molecular Therapy. Methods & Clinical Development. 20: 497-507. PMID 33665223 DOI: 10.1016/j.omtm.2020.12.014  0.084
2015 Cooper JD, Brooks HR, Nelvagal HR. Quantifying storage material accumulation in tissue sections. Methods in Cell Biology. 126: 349-56. PMID 25665454 DOI: 10.1016/bs.mcb.2014.11.010  0.083
2015 Cotel MC, Lenartowicz EM, Natesan S, Modo MM, Cooper JD, Williams SC, Kapur S, Vernon AC. Microglial activation in the rat brain following chronic antipsychotic treatment at clinically relevant doses. European Neuropsychopharmacology : the Journal of the European College of Neuropsychopharmacology. PMID 26321204 DOI: 10.1016/J.Euroneuro.2015.08.004  0.083
2020 Nelvagal HR, Hurtado ML, Eaton SL, Kline RA, Lamont DJ, Sands MS, Wishart TM, Cooper JD. Comparative proteomic profiling reveals mechanisms for early spinal cord vulnerability in CLN1 disease. Scientific Reports. 10: 15157. PMID 32938982 DOI: 10.1038/s41598-020-72075-7  0.083
2017 Naseer SM, Manbachi A, Samandari M, Walch P, Gao Y, Zhang YS, Davoudi F, Wang W, Abrinia K, Cooper JM, Khademhosseini A, Shin SR. Surface acoustic waves induced micropatterning of cells in gelatin methacryloyl (GelMA) hydrogels. Biofabrication. 9: 015020. PMID 28195834 DOI: 10.1088/1758-5090/Aa585E  0.082
2021 Kan SH, Elsharkawi I, Le SQ, Prill H, Mangini L, Cooper JD, Lawrence R, Sands MS, Crawford BE, Dickson PI. Biochemical evaluation of intracerebroventricular rhNAGLU-IGF2 enzyme replacement therapy in neonatal mice with Sanfilippo B syndrome. Molecular Genetics and Metabolism. PMID 33839004 DOI: 10.1016/j.ymgme.2021.03.013  0.082
2004 Griffey M, Bible E, Vogler C, Levy B, Gupta P, Cooper J, Sands MS. Adeno-associated virus 2-mediated gene therapy decreases autofluorescent storage material and increases brain mass in a murine model of infantile neuronal ceroid lipofuscinosis. Neurobiology of Disease. 16: 360-9. PMID 15193292 DOI: 10.1016/J.Nbd.2004.03.005  0.082
2018 Lange J, Haslett LJ, Lloyd-Evans E, Pocock JM, Sands MS, Williams BP, Cooper JD. Compromised astrocyte function and survival negatively impact neurons in infantile neuronal ceroid lipofuscinosis. Acta Neuropathologica Communications. 6: 74. PMID 30089511 DOI: 10.1186/s40478-018-0575-4  0.081
2014 Williams S, Cooper J, Freeman S. Evaluation of normal findings using a detailed and focused technique for transcutaneous abdominal ultrasonography in the horse. Bmc Veterinary Research. 10: S5. PMID 25238559 DOI: 10.1186/1746-6148-10-S1-S5  0.081
2009 Tamaki SJ, Jacobs Y, Dohse M, Capela A, Cooper JD, Reitsma M, He D, Tushinski R, Belichenko PV, Salehi A, Mobley W, Gage FH, Huhn S, Tsukamoto AS, Weissman IL, et al. Neuroprotection of host cells by human central nervous system stem cells in a mouse model of infantile neuronal ceroid lipofuscinosis. Cell Stem Cell. 5: 310-9. PMID 19733542 DOI: 10.1016/J.Stem.2009.05.022  0.081
2010 Wlodkowic D, Cooper JM. Microfabricated analytical systems for integrated cancer cytomics Analytical and Bioanalytical Chemistry. 398: 193-203. PMID 20419489 DOI: 10.1007/s00216-010-3722-8  0.081
2007 Klauke N, Smith G, Cooper JM. Microfluidic systems to examine intercellular coupling of pairs of cardiac myocytes Lab On a Chip - Miniaturisation For Chemistry and Biology. 7: 731-739. PMID 17538715 DOI: 10.1039/B706175G  0.081
2022 Agrawal A, Wang K, Polonchuk L, Cooper J, Hendrix M, Gavaghan DJ, Mirams GR, Clerx M. Models of the cardiac L-type calcium current: A quantitative review. Wires Mechanisms of Disease. e1581. PMID 36028219 DOI: 10.1002/wsbm.1581  0.081
2014 Macauley SL, Wong AM, Shyng C, Augner DP, Dearborn JT, Pearse Y, Roberts MS, Fowler SC, Cooper JD, Watterson DM, Sands MS. An anti-neuroinflammatory that targets dysregulated glia enhances the efficacy of CNS-directed gene therapy in murine infantile neuronal ceroid lipofuscinosis. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 34: 13077-82. PMID 25253854 DOI: 10.1523/Jneurosci.2518-14.2014  0.08
2022 Dong Y, Zhao Y, Li S, Wan Z, Lu R, Yang X, Yu G, Reboud J, Cooper JM, Tian Z, Zhang C. Multiplex, Real-Time, Point-of-care RT-LAMP for SARS-CoV-2 Detection Using the HFman Probe. Acs Sensors. PMID 35192340 DOI: 10.1021/acssensors.1c02079  0.08
2017 Palmieri M, Pal R, Nelvagal HR, Lotfi P, Stinnett GR, Seymour ML, Chaudhury A, Bajaj L, Bondar VV, Bremner L, Saleem U, Tse DY, Sanagasetti D, Wu SM, Neilson JR, ... ... Cooper JD, et al. mTORC1-independent TFEB activation via Akt inhibition promotes cellular clearance in neurodegenerative storage diseases. Nature Communications. 8: 14338. PMID 28165011 DOI: 10.1038/Ncomms14338  0.08
2015 Mattar CN, Wong AM, Hoefer K, Alonso-Ferrero ME, Buckley SM, Howe SJ, Cooper JD, Waddington SN, Chan JK, Rahim AA. Systemic gene delivery following intravenous administration of AAV9 to fetal and neonatal mice and late-gestation nonhuman primates. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 26062602 DOI: 10.1096/fj.14-269092  0.08
2011 Salek RM, Pears MR, Cooper JD, Mitchison HM, Pearce DA, Mortishire-Smith RJ, Griffin JL. A metabolomic comparison of mouse models of the Neuronal Ceroid Lipofuscinoses. Journal of Biomolecular Nmr. 49: 175-84. PMID 21461951 DOI: 10.1007/s10858-011-9491-7  0.08
2013 Mirams GR, Arthurs CJ, Bernabeu MO, Bordas R, Cooper J, Corrias A, Davit Y, Dunn SJ, Fletcher AG, Harvey DG, Marsh ME, Osborne JM, Pathmanathan P, Pitt-Francis J, Southern J, et al. Chaste: an open source C++ library for computational physiology and biology. Plos Computational Biology. 9: e1002970. PMID 23516352 DOI: 10.1371/journal.pcbi.1002970  0.079
2017 Yang Z, Xu G, Reboud J, Kasprzyk-Hordern B, Cooper JM. Monitoring Genetic Population Biomarkers with Wastewater-Based Epidemiology. Analytical Chemistry. PMID 28814081 DOI: 10.1021/acs.analchem.7b02257  0.079
2023 Aslan Y, McGleish O, Reboud J, Cooper JM. Alignment-free construction of double emulsion droplet generation devices incorporating surface wettability contrast. Lab On a Chip. PMID 37966340 DOI: 10.1039/d3lc00584d  0.079
2005 Jordan P, Leach J, Padgett M, Blackburn P, Isaacs N, Goksör M, Hanstorp D, Wright A, Girkin J, Cooper J. Creating permanent 3D arrangements of isolated cells using holographic optical tweezers. Lab On a Chip. 5: 1224-8. PMID 16234944 DOI: 10.1039/B509218C  0.079
2018 Cooper JJ, Johnson M, Radcliffe J, Fisher J. Optimal Emotional Profiles for Peak Performance in Strength and Conditioning. Journal of Strength and Conditioning Research. PMID 30299388 DOI: 10.1519/JSC.0000000000002832  0.079
2012 Macauley SL, Roberts MS, Wong AM, McSloy F, Reddy AS, Cooper JD, Sands MS. Synergistic effects of central nervous system-directed gene therapy and bone marrow transplantation in the murine model of infantile neuronal ceroid lipofuscinosis. Annals of Neurology. 71: 797-804. PMID 22368049 DOI: 10.1002/ana.23545  0.079
2005 Inglis-Broadgate SL, Thomson RE, Pellicano F, Tartaglia MA, Pontikis CC, Cooper JD, Iwata T. FGFR3 regulates brain size by controlling progenitor cell proliferation and apoptosis during embryonic development Developmental Biology. 279: 73-85. PMID 15708559 DOI: 10.1016/J.Ydbio.2004.11.035  0.079
2010 Garwood CJ, Cooper JD, Hanger DP, Noble W. Anti-inflammatory impact of minocycline in a mouse model of tauopathy. Frontiers in Psychiatry. 1: 136. PMID 21423446 DOI: 10.3389/Fpsyt.2010.00136  0.079
2019 Nguyen CH, Glüxam T, Schlerka A, Bauer K, Grandits AM, Hackl H, Dovey O, Zöchbauer-Müller S, Cooper JL, Vassiliou GS, Stoiber D, Wieser R, Heller G. SOCS2 is part of a highly prognostic 4-gene signature in AML and promotes disease aggressiveness. Scientific Reports. 9: 9139. PMID 31235852 DOI: 10.1038/s41598-019-45579-0  0.078
2009 Wlodkowic D, Faley S, Zagnoni M, Wikswo JP, Cooper JM. Microfluidic single-cell array cytometry for the analysis of tumor apoptosis. Analytical Chemistry. 81: 5517-23. PMID 19514700 DOI: 10.1021/Ac9008463  0.078
2011 Hussey RJ, Coates L, Gill RS, Erskine PT, Coker SF, Mitchell E, Cooper JB, Wood S, Broadbridge R, Clarke IN, Lambden PR, Shoolingin-Jordan PM. A structural study of norovirus 3C protease specificity: binding of a designed active site-directed peptide inhibitor. Biochemistry. 50: 240-9. PMID 21128685 DOI: 10.1021/Bi1008497  0.078
2015 Salehi-Reyhani A, Gesellchen F, Mampallil D, Wilson R, Reboud J, Ces O, Willison KR, Cooper JM, Klug DR. Chemical-free lysis and fractionation of cells by use of surface acoustic waves for sensitive protein assays. Analytical Chemistry. 87: 2161-9. PMID 25514590 DOI: 10.1021/ac5033758  0.078
2008 Qian H, Cooper JA. Temporal cooperativity and sensitivity amplification in biological signal transduction. Biochemistry. 47: 2211-20. PMID 18193898 DOI: 10.1021/Bi702125S  0.078
2010 Miller AK, Marsh J, Reeve A, Garny A, Britten R, Halstead M, Cooper J, Nickerson DP, Nielsen PF. An overview of the CellML API and its implementation. Bmc Bioinformatics. 11: 178. PMID 20377909 DOI: 10.1186/1471-2105-11-178  0.078
2005 Pontikis CC, Cotman SL, MacDonald ME, Cooper JD. Thalamocortical neuron loss and localized astrocytosis in the Cln3Deltaex7/8 knock-in mouse model of Batten disease. Neurobiology of Disease. 20: 823-36. PMID 16006136 DOI: 10.1016/J.Nbd.2005.05.018  0.078
2015 Daly AC, Gavaghan DJ, Holmes C, Cooper J. Hodgkin-Huxley revisited: reparametrization and identifiability analysis of the classic action potential model with approximate Bayesian methods. Royal Society Open Science. 2: 150499. PMID 27019736 DOI: 10.1098/rsos.150499  0.078
2009 Wlodkowic D, Skommer J, McGuinness D, Faley S, Kolch W, Darzynkiewicz Z, Cooper JM. Chip-based dynamic real-time quantification of drug-induced cytotoxicity in human tumor cells Analytical Chemistry. 81: 6952-6959. PMID 19572560 DOI: 10.1021/Ac9010217  0.078
2022 Ostergaard JR, Nelvagal HR, Cooper JD. Top-down and bottom-up propagation of disease in the neuronal ceroid lipofuscinoses. Frontiers in Neurology. 13: 1061363. PMID 36438942 DOI: 10.3389/fneur.2022.1061363  0.078
2018 Li Y, Wang XE, Bender MF, Yang R, Cozine TJ, Atallah KM, Arnold F, Cooper JW, Lei QP. Overcoming the Multiple-Monomeric-Peak Profile of Broadly Neutralizing HIV-1 Antibody 10E8 with a Unique Size-Exclusion-Chromatography Method. Analytical Chemistry. PMID 30346697 DOI: 10.1021/acs.analchem.8b03594  0.078
2014 Herod MR, Prince CA, Skilton RJ, Ward VK, Cooper JB, Clarke IN. Structure-based design and functional studies of novel noroviral 3C protease chimaeras offer insights into substrate specificity. The Biochemical Journal. 464: 461-72. PMID 25275273 DOI: 10.1042/BJ20140959  0.077
2008 Partanen S, Haapanen A, Kielar C, Pontikis C, Alexander N, Inkinen T, Saftig P, Gillingwater TH, Cooper JD, Tyynelä J. Synaptic changes in the thalamocortical system of cathepsin D-deficient mice: a model of human congenital neuronal ceroid-lipofuscinosis. Journal of Neuropathology and Experimental Neurology. 67: 16-29. PMID 18091563 DOI: 10.1097/nen.0b013e31815f3899  0.077
2022 Dearborn JT, Nelvagal HR, Rensing NR, Takahashi K, Hughes SM, Wishart TM, Cooper JD, Wong M, Sands MS. Effects of chronic cannabidiol in a mouse model of naturally occurring neuroinflammation, neurodegeneration, and spontaneous seizures. Scientific Reports. 12: 11286. PMID 35789177 DOI: 10.1038/s41598-022-15134-5  0.077
2011 Faley SL, Copland M, Reboud J, Cooper JM. Cell chip array for microfluidic proteomics enabling rapid in situ assessment of intracellular protein phosphorylation. Biomicrofluidics. 5: 24106. PMID 21673844 DOI: 10.1063/1.3587095  0.077
2018 Clarke D, Pearse Y, Kan SH, Le SQ, Sanghez V, Cooper JD, Dickson PI, Iacovino M. Genetically Corrected iPSC-Derived Neural Stem Cell Grafts Deliver Enzyme Replacement to Affect CNS Disease in Sanfilippo B Mice. Molecular Therapy. Methods & Clinical Development. 10: 113-127. PMID 30101150 DOI: 10.1016/j.omtm.2018.06.005  0.077
2009 Wlodkowic D, Faley S, Skommer J, McGuinness D, Cooper JM. Biological implications of polymeric microdevices for live cell assays Analytical Chemistry. 81: 9828-9833. PMID 19902928 DOI: 10.1021/Ac902010S  0.077
2019 Cooper J. Testosterone: ‘the Best Discriminating Factor’ Philosophies. 4: 36. DOI: 10.3390/PHILOSOPHIES4030036  0.077
2016 Xu G, Nolder D, Reboud J, Oguike MC, van Schalkwyk DA, Sutherland CJ, Cooper JM. Paper-Origami-Based Multiplexed Malaria Diagnostics from Whole Blood. Angewandte Chemie (International Ed. in English). PMID 27554333 DOI: 10.1002/anie.201606060  0.077
2012 Li W, Cooper J, Karajannis MA, Giancotti FG. Merlin: a tumour suppressor with functions at the cell cortex and in the nucleus. Embo Reports. 13: 204-15. PMID 22482125 DOI: 10.1038/Embor.2012.11  0.077
2023 Papamatthaiou S, Boxall-Clasby J, Douglas EJA, Jajesniak P, Peyret H, Mercer-Chalmers J, Kumar VKS, Lomonossoff GP, Reboud J, Laabei M, Cooper JM, Kasprzyk-Hordern B, Moschou D. LoCKAmp: lab-on-PCB technology for <3 minute virus genetic detection. Lab On a Chip. PMID 37740394 DOI: 10.1039/d3lc00441d  0.077
2014 Akagi J, Hall CJ, Crosier KE, Cooper JM, Crosier PS, Wlodkowic D. OpenSource lab-on-a-chip physiometer for accelerated zebrafish embryo biotests. Current Protocols in Cytometry / Editorial Board, J. Paul Robinson, Managing Editor ... [Et Al.]. 67: Unit 9.44.. PMID 24510773 DOI: 10.1002/0471142956.cy0944s67  0.076
2013 Kühl TG, Dihanich S, Wong AM, Cooper JD. Regional brain atrophy in mouse models of neuronal ceroid lipofuscinosis: a new rostrocaudal perspective. Journal of Child Neurology. 28: 1117-22. PMID 24014506 DOI: 10.1177/0883073813494479  0.076
2018 Yuan X, Song Y, Song Y, Xu J, Wu Y, Glidle A, Cusack M, Ijaz UZ, Cooper JM, Huang WE, Yin H. Effect of laser irradiation on cell function and its implications in Raman spectroscopy. Applied and Environmental Microbiology. PMID 29427427 DOI: 10.1128/AEM.02508-17  0.076
2013 Groh J, Kühl TG, Ip CW, Nelvagal HR, Sri S, Duckett S, Mirza M, Langmann T, Cooper JD, Martini R. Immune cells perturb axons and impair neuronal survival in a mouse model of infantile neuronal ceroid lipofuscinosis. Brain : a Journal of Neurology. 136: 1083-101. PMID 23485853 DOI: 10.1093/Brain/Awt020  0.076
2016 Adamson SE, Griffiths R, Moravec R, Senthivinayagam S, Montgomery G, Chen W, Han J, Sharma PR, Mullins GR, Gorski SA, Cooper JA, Kadl A, Enfield K, Braciale TJ, Harris TE, et al. Disabled homolog 2 controls macrophage phenotypic polarization and adipose tissue inflammation. The Journal of Clinical Investigation. PMID 26927671 DOI: 10.1172/Jci79590  0.076
2009 Klauke N, Smith G, Cooper JM. Local regional stimulation of single isolated ventricular myocytes using microfluidics Analytical Chemistry. 81: 6390-6398. PMID 19572561 DOI: 10.1021/Ac9008429  0.076
2004 Ballif BA, Arnaud L, Arthur WT, Guris D, Imamoto A, Cooper JA. Activation of a Dab1/CrkL/C3G/Rap1 pathway in Reelin-stimulated neurons. Current Biology : Cb. 14: 606-10. PMID 15062102 DOI: 10.1016/J.Cub.2004.03.038  0.076
2022 Dunsmore L, Navo CD, Becher J, de Montes EG, Guerreiro A, Hoyt E, Brown L, Zelenay V, Mikutis S, Cooper J, Barbieri I, Lawrinowitz S, Siouve E, Martin E, Ruivo PR, et al. Controlled masking and targeted release of redox-cycling ortho-quinones via a C-C bond-cleaving 1,6-elimination. Nature Chemistry. PMID 35764792 DOI: 10.1038/s41557-022-00964-7  0.076
2010 Pressey SN, O'Donnell KJ, Stauber T, Fuhrmann JC, Tyynelä J, Jentsch TJ, Cooper JD. Distinct neuropathologic phenotypes after disrupting the chloride transport proteins ClC-6 or ClC-7/Ostm1. Journal of Neuropathology and Experimental Neurology. 69: 1228-46. PMID 21107136 DOI: 10.1097/Nen.0B013E3181Ffe742  0.075
2021 Simon G, Busch C, Andrade MAB, Reboud J, Cooper JM, Desmulliez MPY, Riehle MO, Bernassau AL. Bandpass sorting of heterogeneous cells using a single surface acoustic wave transducer pair. Biomicrofluidics. 15: 014105. PMID 33537112 DOI: 10.1063/5.0040181  0.075
2017 Goldfinger M, Zeile WL, Corado CR, O'Neill CA, Tsuruda LS, Laipis PJ, Cooper JD. Partial rescue of neuropathology in the murine model of PKU following administration of recombinant phenylalanine ammonia lyase (pegvaliase). Molecular Genetics and Metabolism. PMID 28506393 DOI: 10.1016/J.Ymgme.2017.04.013  0.075
2010 Cooper J, Cervenansky F, De Fabritiis G, Fenner J, Friboulet D, Giorgino T, Manos S, Martelli Y, Villà-Freixa J, Zasada S, Lloyd S, McCormack K, Coveney PV. The Virtual Physiological Human ToolKit. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 368: 3925-36. PMID 20643685 DOI: 10.1098/rsta.2010.0144  0.075
2020 Guo J, Douangamath A, Song W, Coker AR, Chan AWE, Wood SP, Cooper JB, Resnick E, London N, Delft FV. -screening for discovery of human norovirus 3C-like protease inhibitors. Journal of Structural Biology: X. 4: 100031. PMID 32743543 DOI: 10.1016/j.yjsbx.2020.100031  0.075
2007 Yin H, Zhang X, Pattrick N, Klauke N, Cordingley HC, Haswell SJ, Cooper JM. Influence of hydrodynamic conditions on quantitative cellular assays in microfluidic systems. Analytical Chemistry. 79: 7139-44. PMID 17658886 DOI: 10.1021/ac071146k  0.075
2004 Arthur WT, Quilliam LA, Cooper JA. Rap1 promotes cell spreading by localizing Rac guanine nucleotide exchange factors. The Journal of Cell Biology. 167: 111-22. PMID 15479739 DOI: 10.1083/Jcb.200404068  0.075
2019 Cai CX, Schneck NA, Zhao W, Blackstock D, Cai J, Harris D, Ivleva VB, Gollapudi D, Horwitz J, Arnold FJ, Cooper JW, Lei QP. Characterization of AEBSF-antibody modifications for a protease inhibitor supplementation strategy. Analytical and Bioanalytical Chemistry. PMID 31367804 DOI: 10.1007/s00216-019-01995-9  0.074
2014 Bourquin Y, Syed A, Reboud J, Ranford-Cartwright LC, Barrett MP, Cooper JM. Rare-cell enrichment by a rapid, label-free, ultrasonic isopycnic technique for medical diagnostics. Angewandte Chemie (International Ed. in English). 53: 5587-90. PMID 24677583 DOI: 10.1002/anie.201310401  0.074
2007 Cooper JM. Clinical decision making: doctor, when can I drive? American Journal of Orthopedics (Belle Mead, N.J.). 36: 78-80. PMID 17405636  0.074
2000 Cooper JJ, Mason GJ. Increasing costs of access to resources cause re-scheduling of behaviour in American mink (Mustela vison): implications for the assessment of behavioural priorities Applied Animal Behaviour Science. 66: 135-151. DOI: 10.1016/S0168-1591(99)00069-6  0.074
2009 Zagnoni M, Cooper JM. On-chip electrocoalescence of microdroplets as a function of voltage, frequency and droplet size Lab On a Chip - Miniaturisation For Chemistry and Biology. 9: 2652-2658. PMID 19704980 DOI: 10.1039/b906298j  0.074
2018 Lotfi P, Tse DY, di Ronza A, Seymour ML, Martano G, Cooper JD, Pereira FA, Passafaro M, Wu SM, Sardiello M. Trehalose reduces retinal degeneration, neuroinflammation and storage burden caused by a lysosomal hydrolase deficiency. Autophagy. PMID 29916295 DOI: 10.1080/15548627.2018.1474313  0.074
2020 Cooper JD, Mole SE. Future perspectives: What lies ahead for Neuronal Ceroid Lipofuscinosis research? Biochimica Et Biophysica Acta. Molecular Basis of Disease. 165681. PMID 31926264 DOI: 10.1016/J.Bbadis.2020.165681  0.074
2020 Au YZ, Gu M, De Braekeleer E, Gozdecka M, Aspris D, Tarumoto Y, Cooper J, Yu J, Ong SH, Chen X, Tzelepis K, Huntly BJP, Vassiliou G, Yusa K. KAT7 is a genetic vulnerability of acute myeloid leukemias driven by MLL rearrangements. Leukemia. PMID 32764680 DOI: 10.1038/s41375-020-1001-z  0.074
2005 Klauke N, Smith GL, Cooper JM. Stimulation of isolated ventricular myocytes within an open architecture microarray. Ieee Transactions On Bio-Medical Engineering. 52: 531-8. PMID 15759583 DOI: 10.1109/Tbme.2004.842971  0.074
2018 Massaro G, Mattar CNZ, Wong AMS, Sirka E, Buckley SMK, Herbert BR, Karlsson S, Perocheau DP, Burke D, Heales S, Richard-Londt A, Brandner S, Huebecker M, Priestman DA, Platt FM, ... ... Cooper JD, et al. Fetal gene therapy for neurodegenerative disease of infants. Nature Medicine. PMID 30013199 DOI: 10.1038/S41591-018-0106-7  0.074
2010 Anderson K, Cooper JM, Haswell SJ, Marshall D, Yin H, Zhang X. Microfluidic-based measurements of cytochrome P450 enzyme activity of primary mammalian hepatocytes. The Analyst. 135: 1282-7. PMID 20401410 DOI: 10.1039/c0an00031k  0.073
2015 Bergmann FT, Cooper J, Le Novère N, Nickerson D, Waltemath D. Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 2. Journal of Integrative Bioinformatics. 12: 262. PMID 26528560 DOI: 10.2390/biecoll-jib-2015-262  0.073
2017 Wang L, Cooper JA. Optogenetic control of the Dab1 signaling pathway. Scientific Reports. 7: 43760. PMID 28272509 DOI: 10.1038/srep43760  0.073
2016 Tzelepis K, Koike-Yusa H, De Braekeleer E, Li Y, Metzakopian E, Dovey OM, Mupo A, Grinkevich V, Li M, Mazan M, Gozdecka M, Ohnishi S, Cooper J, Patel M, McKerrell T, et al. A CRISPR Dropout Screen Identifies Genetic Vulnerabilities and Therapeutic Targets in Acute Myeloid Leukemia. Cell Reports. 17: 1193-1205. PMID 27760321 DOI: 10.1016/J.Celrep.2016.09.079  0.073
1995 Cooper JJ, Appleby MC. Individual variation in the demand for a nest-box and the incidence of floor eggs Applied Animal Behaviour Science. 44: 260. DOI: 10.1016/0168-1591(95)92343-R  0.073
2011 Zagnoni M, Le Lain G, Cooper JM. Electrocoalescence mechanisms of microdroplets using localized electric fields in microfluidic channels. Langmuir : the Acs Journal of Surfaces and Colloids. 26: 14443-9. PMID 20731333 DOI: 10.1021/la101517t  0.073
2011 Seehafer SS, Ramirez-Montealegre D, Wong AM, Chan CH, Castaneda J, Horak M, Ahmadi SM, Lim MJ, Cooper JD, Pearce DA. Immunosuppression alters disease severity in juvenile Batten disease mice. Journal of Neuroimmunology. 230: 169-72. PMID 20937531 DOI: 10.1016/j.jneuroim.2010.08.024  0.072
2014 Kremer C, Witte C, Neale SL, Reboud J, Barrett MP, Cooper JM. Shape-dependent optoelectronic cell lysis. Angewandte Chemie (International Ed. in English). 53: 842-6. PMID 24402800 DOI: 10.1002/anie.201307751  0.072
2007 Weimer JM, Benedict JW, Elshatory YM, Short DW, Ramirez-Montealegre D, Ryan DA, Alexander NA, Federoff HJ, Cooper JD, Pearce DA. Alterations in striatal dopamine catabolism precede loss of substantia nigra neurons in a mouse model of juvenile neuronal ceroid lipofuscinosis. Brain Research. 1162: 98-112. PMID 17617387 DOI: 10.1016/J.Brainres.2007.05.018  0.072
2018 Ivleva VB, Schneck NA, Gollapudi D, Arnold F, Cooper JW, Lei QP. Investigation of Sequence Clipping and Structural Heterogeneity of an HIV Broadly Neutralizing Antibody by a Comprehensive LC-MS Analysis. Journal of the American Society For Mass Spectrometry. PMID 29736600 DOI: 10.1007/s13361-018-1968-0  0.072
2009 Feng L, Cooper JA. Dual functions of Dab1 during brain development. Molecular and Cellular Biology. 29: 324-32. PMID 18981215 DOI: 10.1128/MCB.00663-08  0.072
2011 Cooper J, Li W, You L, Schiavon G, Pepe-Caprio A, Zhou L, Ishii R, Giovannini M, Hanemann CO, Long SB, Erdjument-Bromage H, Zhou P, Tempst P, Giancotti FG. Merlin/NF2 functions upstream of the nuclear E3 ubiquitin ligase CRL4DCAF1 to suppress oncogenic gene expression. Science Signaling. 4: pt6. PMID 21878678 DOI: 10.1126/Scisignal.2002314  0.072
2012 Faley S, Copland M, Reboud J, Cooper JM. Intracellular protein trafficking kinetics in chronic myeloid leukemia stem cells using a microfluidic platform. Integrative Biology : Quantitative Biosciences From Nano to Macro. 4: 368-73. PMID 22344285 DOI: 10.1039/C2Ib00086E  0.072
2021 Laverack K, Pike TW, Cooper JJ, Frasnelli E. The effect of sex and age on paw use within a large sample of dogs (Canis familiaris) Applied Animal Behaviour Science. 238: 105298. DOI: 10.1016/J.APPLANIM.2021.105298  0.072
2021 Li Y, Chen X, Zhao Y, Wan Z, Zeng Y, Ma Y, Zhou L, Xu G, Reboud J, Cooper JM, Zhang C. A rapid variant-tolerant reverse transcription loop-mediated isothermal amplification assay for the point of care detection of HIV-1. The Analyst. PMID 34323889 DOI: 10.1039/d1an00598g  0.072
2022 Xu G, Reboud J, Guo Y, Yang H, Gu H, Fan C, Qian X, Cooper JM. Programmable design of isothermal nucleic acid diagnostic assays through abstraction-based models. Nature Communications. 13: 1635. PMID 35347157 DOI: 10.1038/s41467-022-29101-1  0.072
2018 Xu G, Zhao H, Reboud J, Cooper JM. Cycling of Rational Hybridization Chain Reaction to Enable Enzyme-Free DNA-Based Clinical Diagnosis. Acs Nano. PMID 29965722 DOI: 10.1021/acsnano.8b03183  0.072
2020 Moreddu R, Elsherif M, Adams H, Moschou D, Cordeiro MF, Wolffsohn JS, Vigolo D, Butt H, Cooper JM, Yetisen AK. Integration of paper microfluidic sensors into contact lenses for tear fluid analysis. Lab On a Chip. PMID 32944726 DOI: 10.1039/d0lc00438c  0.071
2010 Buonocore F, Hill MJ, Campbell CD, Oladimeji PB, Jeffries AR, Troakes C, Hortobagyi T, Williams BP, Cooper JD, Bray NJ. Effects of cis-regulatory variation differ across regions of the adult human brain. Human Molecular Genetics. 19: 4490-6. PMID 20829226 DOI: 10.1093/hmg/ddq380  0.071
2010 Klauke N, Smith G, Cooper JM. Regional electroporation of single cardiac myocytes in a focused electric field Analytical Chemistry. 82: 585-592. PMID 20020746 DOI: 10.1021/Ac901886J  0.071
2016 Zhang S, Juvert J, Cooper JM, Neale SL. Manipulating and assembling metallic beads with Optoelectronic Tweezers. Scientific Reports. 6: 32840. PMID 27599445 DOI: 10.1038/srep32840  0.071
2003 Brich J, Shie FS, Howell BW, Li R, Tus K, Wakeland EK, Jin LW, Mumby M, Churchill G, Herz J, Cooper JA. Genetic modulation of tau phosphorylation in the mouse. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 23: 187-92. PMID 12514215  0.071
2012 Reboud J, Wilson R, Zhang Y, Ismail MH, Bourquin Y, Cooper JM. Nebulisation on a disposable array structured with phononic lattices. Lab On a Chip. 12: 1268-73. PMID 22327572 DOI: 10.1039/c2lc20705b  0.071
2018 Nordenfelt P, Cooper JM, Hochstetter A. Matrix-masking to balance nonuniform illumination in microscopy. Optics Express. 26: 17279-17288. PMID 30119541  0.071
2018 Chen Z, Mo J, Brosseau JP, Shipman T, Wang Y, Liao CP, Cooper JM, Allaway RJ, Gosline SJC, Guinney J, Carroll TJ, Le LQ. Spatiotemporal loss of NF1 in Schwann cell lineage leads to different types of cutaneous neurofibroma susceptible to modification by the Hippo pathway. Cancer Discovery. PMID 30348677 DOI: 10.1158/2159-8290.Cd-18-0151  0.071
2008 Pitt-Francis J, Bernabeu MO, Cooper J, Garny A, Momtahan L, Osborne J, Pathmanathan P, Rodriguez B, Whiteley JP, Gavaghan DJ. Chaste: using agile programming techniques to develop computational biology software. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 366: 3111-36. PMID 18565813 DOI: 10.1098/rsta.2008.0096  0.07
2005 Pears MR, Cooper JD, Mitchison HM, Mortishire-Smith RJ, Pearce DA, Griffin JL. High resolution 1H NMR-based metabolomics indicates a neurotransmitter cycling deficit in cerebral tissue from a mouse model of Batten disease. The Journal of Biological Chemistry. 280: 42508-14. PMID 16239221 DOI: 10.1074/jbc.M507380200  0.07
2005 Cooper JJ, Mcall N, Johnson S, Davidson H. The short-term effects of increasing meal frequency on stereotypic behaviour of stabled horses Applied Animal Behaviour Science. 90: 351-364. DOI: 10.1016/J.APPLANIM.2004.08.005  0.07
2006 Cheng W, Klauke N, Sedgwick H, Smith GL, Cooper JM. Metabolic monitoring of the electrically stimulated single heart cell within a microfluidic platform. Lab On a Chip. 6: 1424-31. PMID 17066165 DOI: 10.1039/B608202E  0.07
2011 Martino C, Zagnoni M, Sandison ME, Chanasakulniyom M, Pitt AR, Cooper JM. Intracellular protein determination using droplet-based immunoassays. Analytical Chemistry. 83: 5361-8. PMID 21574549 DOI: 10.1021/ac200876q  0.07
2015 Connor AJ, Nowak RP, Lorenzon E, Thomas M, Herting F, Hoert S, Quaiser T, Shochat E, Pitt-Francis J, Cooper J, Maini PK, Byrne HM. An integrated approach to quantitative modelling in angiogenesis research. Journal of the Royal Society, Interface / the Royal Society. 12: 0546. PMID 26289655 DOI: 10.1098/Rsif.2015.0546  0.07
2002 Cai X, Klauke N, Glidle A, Cobbold P, Smith GL, Cooper JM. Ultra-low-volume, real-time measurements of lactate from the single heart cell using microsystems technology. Analytical Chemistry. 74: 908-14. PMID 11866072 DOI: 10.1021/Ac010941+  0.07
2018 Adjogatse E, Erskine P, Wells SA, Kelly JM, Wilden JD, Chan AWE, Selwood D, Coker A, Wood S, Cooper JB. Structure and function of L-threonine-3-dehydrogenase from the parasitic protozoan Trypanosoma brucei revealed by X-ray crystallography and geometric simulations. Acta Crystallographica. Section D, Structural Biology. 74: 861-876. PMID 30198897 DOI: 10.1107/S2059798318009208  0.07
2022 Harris G, Rickard JJS, Butt G, Kelleher L, Blanch R, Cooper JM, Oppenheimer PG. Review: Emerging Oculomics Based Diagnostic Technologies for Traumatic Brain Injury. Ieee Reviews in Biomedical Engineering. PMID 35320105 DOI: 10.1109/RBME.2022.3161352  0.07
2016 Langan PS, Vandavasi VG, Weiss KL, Cooper JB, Ginell SL, Coates L. The structure of Toho1 β-lactamase in complex with penicillin reveals the role of Tyr105 in substrate recognition. Febs Open Bio. 6: 1170-1177. PMID 28255534 DOI: 10.1002/2211-5463.12132  0.07
2015 Cooper JA, Kaneko T, Li SS. Cell regulation by phosphotyrosine-targeted ubiquitin ligases. Molecular and Cellular Biology. 35: 1886-97. PMID 25776560 DOI: 10.1128/MCB.00098-15  0.07
2009 Yin H, Ji B, Dobson PS, Mosbahi K, Glidle A, Gadegaard N, Freer A, Cooper JM, Cusack M. Screening of biomineralization using microfluidics. Analytical Chemistry. 81: 473-8. PMID 19117468 DOI: 10.1021/ac801980b  0.07
2011 Wlodkowic D, Faley S, Darzynkiewicz Z, Cooper JM. Real-time cytotoxicity assays Methods in Molecular Biology (Clifton, N.J.). 731: 285-291. PMID 21516415 DOI: 10.1007/978-1-61779-080-5_23  0.07
2009 Gill R, Kolstoe SE, Mohammed F, Al D-Bass A, Mosely JE, Sarwar M, Cooper JB, Wood SP, Shoolingin-Jordan PM. Structure of human porphobilinogen deaminase at 2.8 Å: The molecular basis of acute intermittent porphyria Biochemical Journal. 420: 17-25. PMID 19207107 DOI: 10.1042/Bj20082077  0.07
2008 Oswald MJ, Palmer DN, Kay GW, Barwell KJ, Cooper JD. Location and connectivity determine GABAergic interneuron survival in the brains of South Hampshire sheep with CLN6 neuronal ceroid lipofuscinosis. Neurobiology of Disease. 32: 50-65. PMID 18634879 DOI: 10.1016/j.nbd.2008.06.004  0.069
2022 Pearse Y, Clarke D, Kan SH, Le SQ, Sanghez V, Luzzi A, Pham I, Nih LR, Cooper JD, Dickson PI, Iacovino M. Brain transplantation of genetically corrected Sanfilippo type B neural stem cells induces partial cross-correction of the disease. Molecular Therapy. Methods & Clinical Development. 27: 452-463. PMID 36419468 DOI: 10.1016/j.omtm.2022.10.013  0.069
2006 Williams P, Coates L, Mohammed F, Gill R, Erskine P, Bourgeois D, Wood SP, Anthony C, Cooper JB. The 1.6A X-ray structure of the unusual c-type cytochrome, cytochrome cL, from the methylotrophic bacterium Methylobacterium extorquens. Journal of Molecular Biology. 357: 151-62. PMID 16414073 DOI: 10.1016/j.jmb.2005.12.055  0.069
2010 Wlodkowic D, Cooper JM. Tumors on chips: Oncology meets microfluidics Current Opinion in Chemical Biology. 14: 556-567. PMID 20832352 DOI: 10.1016/j.cbpa.2010.08.016  0.069
2014 Jiwaji M, Sandison ME, Reboud J, Stevenson R, Daly R, Barkess G, Faulds K, Kolch W, Graham D, Girolami MA, Cooper JM, Pitt AR. Quantification of functionalised gold nanoparticle-targeted knockdown of gene expression in HeLa cells. Plos One. 9: e99458. PMID 24926959 DOI: 10.1371/journal.pone.0099458  0.069
2010 Dhami P, Bruce AW, Jim JH, Dillon SC, Hall A, Cooper JL, Bonhoure N, Chiang K, Ellis PD, Langford C, Andrews RM, Vetrie D. Genomic approaches uncover increasing complexities in the regulatory landscape at the human SCL (TAL1) locus. Plos One. 5: e9059. PMID 20140202 DOI: 10.1371/journal.pone.0009059  0.069
2024 Kim D, Olson JM, Cooper JA. N-cadherin dynamically regulates pediatric glioma cell migration in complex environments. Biorxiv : the Preprint Server For Biology. PMID 38260559 DOI: 10.1101/2023.04.04.535599  0.069
2008 Mushfique H, Leach J, Yin H, Di Leonardo R, Padgett MJ, Cooper JM. 3D mapping of microfluidic flow in laboratory-on-a-chip structures using optical tweezers. Analytical Chemistry. 80: 4237-40. PMID 18442263 DOI: 10.1021/ac8002006  0.069
2024 Kim D, Olson JM, Cooper JA. N-cadherin dynamically regulates pediatric glioma cell migration in complex environments. The Journal of Cell Biology. 223. PMID 38477830 DOI: 10.1083/jcb.202401057  0.069
2015 Hucka M, Nickerson DP, Bader GD, Bergmann FT, Cooper J, Demir E, Garny A, Golebiewski M, Myers CJ, Schreiber F, Waltemath D, Le Novère N. Promoting Coordinated Development of Community-Based Information Standards for Modeling in Biology: The COMBINE Initiative. Frontiers in Bioengineering and Biotechnology. 3: 19. PMID 25759811 DOI: 10.3389/Fbioe.2015.00019  0.069
2009 Faley SL, Copland M, Wlodkowic D, Kolch W, Seale KT, Wikswo JP, Cooper JM. Microfluidic single cell arrays to interrogate signalling dynamics of individual, patient-derived hematopoietic stem cells. Lab On a Chip. 9: 2659-64. PMID 19704981 DOI: 10.1039/B902083G  0.069
2002 Johannessen EA, Weaver JM, Bourova L, Svoboda P, Cobbold PH, Cooper JM. Micromachined nanocalorimetric sensor for ultra-low-volume cell-based assays. Analytical Chemistry. 74: 2190-7. PMID 12033326 DOI: 10.1021/Ac011028B  0.069
2011 Zagnoni M, Cooper JM. Droplet microfluidics for high-throughput analysis of cells and particles Methods in Cell Biology. 102: 23-48. PMID 21704834 DOI: 10.1016/B978-0-12-374912-3.00002-X  0.068
2005 Wang L, Johannessen EA, Hammond PA, Cui L, Reid SW, Cooper JM, Cumming DR. A programmable microsystem using system-on-chip for real-time biotelemetry. Ieee Transactions On Bio-Medical Engineering. 52: 1251-60. PMID 16041988 DOI: 10.1109/Tbme.2005.847562  0.068
2007 Castaneda JA, Lim MJ, Cooper JD, Pearce DA. Immune system irregularities in lysosomal storage disorders. Acta Neuropathologica. 115: 159-74. PMID 17924126 DOI: 10.1007/s00401-007-0296-4  0.068
2020 Wang Y, Sun S, Luo J, Xiong Y, Ming T, Liu J, Ma Y, Yan S, Yang Y, Yang Z, Reboud J, Yin H, Cooper JM, Cai X. Low sample volume origami-paper-based graphene-modified aptasensors for label-free electrochemical detection of cancer biomarker-EGFR. Microsystems & Nanoengineering. 6: 32. PMID 34567646 DOI: 10.1038/s41378-020-0146-2  0.068
2005 Kuo G, Arnaud L, Kronstad-O'Brien P, Cooper JA. Absence of Fyn and Src causes a reeler-like phenotype. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 25: 8578-86. PMID 16162939 DOI: 10.1523/JNEUROSCI.1656-05.2005  0.068
2008 Malik B, Currais A, Andres A, Towlson C, Pitsi D, Nunes A, Niblock M, Cooper J, Hortobágyi T, Soriano S. Loss of neuronal cell cycle control as a mechanism of neurodegeneration in the presenilin-1 Alzheimer's disease brain. Cell Cycle (Georgetown, Tex.). 7: 637-46. PMID 18239458 DOI: 10.4161/Cc.7.5.5427  0.068
2023 Kanan MK, Sheehan PW, Haines JN, Gomez PG, Dhuler A, Nadarajah CJ, Wargel ZM, Freeberg BM, Nelvagal HR, Izumo M, Takahashi JS, Cooper JD, Davis AA, Musiek ES. Neuronal deletion of the circadian clock gene Bmal1 induces cell-autonomous dopaminergic neurodegeneration. Jci Insight. PMID 38032732 DOI: 10.1172/jci.insight.162771  0.068
2011 Nunes A, Pressey SN, Cooper JD, Soriano S. Loss of amyloid precursor protein in a mouse model of Niemann-Pick type C disease exacerbates its phenotype and disrupts tau homeostasis. Neurobiology of Disease. 42: 349-59. PMID 21303697 DOI: 10.1016/J.Nbd.2011.01.028  0.068
2017 Simon G, Andrade MAB, Reboud J, Marques-Hueso J, Desmulliez MPY, Cooper JM, Riehle MO, Bernassau AL. Particle separation by phase modulated surface acoustic waves. Biomicrofluidics. 11: 054115. PMID 29152026 DOI: 10.1063/1.5001998  0.068
2010 Cheng W, Klauke N, Smith G, Cooper JM. Microfluidic cell arrays for metabolic monitoring of stimulated cardiomyocytes. Electrophoresis. 31: 1405-13. PMID 20333720 DOI: 10.1002/Elps.200900579  0.067
2010 Dixon LM, Hardiman JR, Cooper JJ. Floor area and the behavior of pet rabbits (Oryctolagus cuniculus) Journal of Veterinary Behavior. 5: 40-41. DOI: 10.1016/J.JVEB.2009.09.043  0.067
2013 Zemzemi N, Bernabeu MO, Saiz J, Cooper J, Pathmanathan P, Mirams GR, Pitt-Francis J, Rodriguez B. Computational assessment of drug-induced effects on the electrocardiogram: From ion channel to body surface potentials British Journal of Pharmacology. 168: 718-733. PMID 22946617 DOI: 10.1111/j.1476-5381.2012.02200.x  0.067
2007 Monaghan PB, McCarney KM, Ricketts A, Littleford RE, Docherty F, Smith WE, Graham D, Cooper JM. Bead-based DNA diagnostic assay for chlamydia using nanoparticle-mediated surface-enhanced resonance Raman scattering detection within a lab-on-a-chip format. Analytical Chemistry. 79: 2844-9. PMID 17326610 DOI: 10.1021/ac061769i  0.067
2017 Gollapudi D, Wycuff DL, Schwartz RM, Cooper JW, Cheng KC. Development of high-throughput and high sensitivity capillary gel electrophoresis platform method for Western, Eastern, and Venezuelan equine encephalitis (WEVEE) virus like particles (VLPs) purity determination and characterization. Electrophoresis. PMID 28842921 DOI: 10.1002/elps.201700217  0.067
2002 Yasukawa T, Glidle A, Cooper JM, Matsue T. Electroanalysis of metabolic flux from single cells in simple picoliter-volume microsystems. Analytical Chemistry. 74: 5001-8. PMID 12380823 DOI: 10.1021/Ac025836U  0.067
2014 Cooper JA. Molecules and mechanisms that regulate multipolar migration in the intermediate zone. Frontiers in Cellular Neuroscience. 8: 386. PMID 25452716 DOI: 10.3389/fncel.2014.00386  0.067
2004 Johannessen EA, Wang L, Cui L, Tang TB, Ahmadian M, Astaras A, Reid SW, Yam PS, Murray AF, Flynn BW, Beaumont SP, Cumming DR, Cooper JM. Implementation of multichannel sensors for remote biomedical measurements in a microsystems format. Ieee Transactions On Bio-Medical Engineering. 51: 525-35. PMID 15000383 DOI: 10.1109/Tbme.2003.820370  0.067
2018 Bergmann FT, Cooper J, König M, Moraru I, Nickerson D, Novère NL, Olivier BG, Sahle S, Smith L, Waltemath D. Simulation Experiment Description Markup Language (SED-ML) Level 1 Version 3 (L1V3). Journal of Integrative Bioinformatics. PMID 29550789 DOI: 10.1515/jib-2017-0086  0.067
2015 Vernon AC, So PW, Lythgoe DJ, Chege W, Cooper JD, Williams SC, Kapur S. Longitudinal in vivo maturational changes of metabolites in the prefrontal cortex of rats exposed to polyinosinic-polycytidylic acid in utero. European Neuropsychopharmacology : the Journal of the European College of Neuropsychopharmacology. PMID 26475576 DOI: 10.1016/J.Euroneuro.2015.09.022  0.067
2019 Xu G, Lai M, Wilson R, Glidle A, Reboud J, Cooper JM. Branched hybridization chain reaction-using highly dimensional DNA nanostructures for label-free, reagent-less, multiplexed molecular diagnostics. Microsystems & Nanoengineering. 5: 37. PMID 31636927 DOI: 10.1038/s41378-019-0076-z  0.067
2005 Gill R, Mohammed F, Badyal R, Coates L, Erskine P, Thompson D, Cooper J, Gore M, Wood S. High-resolution structure of myo-inositol monophosphatase, the putative target of lithium therapy. Acta Crystallographica. Section D, Biological Crystallography. 61: 545-55. PMID 15858264 DOI: 10.1107/S0907444905004038  0.066
2012 Schmiedt ML, Blom T, Blom T, Kopra O, Wong A, von Schantz-Fant C, Ikonen E, Kuronen M, Jauhiainen M, Cooper JD, Jalanko A. Cln5-deficiency in mice leads to microglial activation, defective myelination and changes in lipid metabolism. Neurobiology of Disease. 46: 19-29. PMID 22182690 DOI: 10.1016/j.nbd.2011.12.009  0.066
2010 Zagnoni M, Cooper JM. A microdroplet-based shift register Lab On a Chip - Miniaturisation For Chemistry and Biology. 10: 3069-3073. PMID 20856984 DOI: 10.1039/c0lc00219d  0.066
2004 Cooper JW, Gao J, Lee CS. Electronic gel protein transfer and identification using matrix-assisted laser desorption/ionization-mass spectrometry. Electrophoresis. 25: 1379-85. PMID 15174060 DOI: 10.1002/elps.200305857  0.066
2014 Condliffe D, Wong A, Troakes C, Proitsi P, Patel Y, Chouliaras L, Fernandes C, Cooper J, Lovestone S, Schalkwyk L, Mill J, Lunnon K. Cross-region reduction in 5-hydroxymethylcytosine in Alzheimer's disease brain. Neurobiology of Aging. 35: 1850-4. PMID 24679604 DOI: 10.1016/J.Neurobiolaging.2014.02.002  0.065
2006 Weimer JM, Custer AW, Benedict JW, Alexander NA, Kingsley E, Federoff HJ, Cooper JD, Pearce DA. Visual deficits in a mouse model of Batten disease are the result of optic nerve degeneration and loss of dorsal lateral geniculate thalamic neurons. Neurobiology of Disease. 22: 284-93. PMID 16412658 DOI: 10.1016/J.Nbd.2005.11.008  0.065
2009 Yao A, Tassieri M, Padgett M, Cooper J. Microrheology with optical tweezers. Lab On a Chip. 9: 2568-75. PMID 19680580 DOI: 10.1039/B907992K  0.065
2018 Kesireddy N, Kheireldin RK, Lu A, Cooper J, Liu J, Ebraheim NA. Current treatment of congenital pseudarthrosis of the tibia: a systematic review and meta-analysis. Journal of Pediatric Orthopedics. Part B. PMID 29878977 DOI: 10.1097/BPB.0000000000000524  0.065
2012 Matsuki T, Zaka M, Guerreiro R, van der Brug MP, Cooper JA, Cookson MR, Hardy JA, Howell BW. Identification of Stk25 as a genetic modifier of Tau phosphorylation in Dab1-mutant mice. Plos One. 7: e31152. PMID 22355340 DOI: 10.1371/Journal.Pone.0031152  0.065
2006 An Y, Cooper JW, Balgley BM, Lee CS. Selective enrichment and ultrasensitive identification of trace peptides in proteome analysis using transient capillary isotachophoresis/zone electrophoresis coupled with nano-ESI-MS. Electrophoresis. 27: 3599-608. PMID 16927423 DOI: 10.1002/elps.200600093  0.065
2019 Kon E, Calvo-Jimenez E, Cossard A, Na Y, Cooper JA, Jossin Y. N-cadherin-regulated FGFR ubiquitination and degradation control mammalian neocortical projection neuron migration. Elife. 8. PMID 31577229 DOI: 10.7554/Elife.47673  0.065
2015 Chanasakulniyom M, Glidle A, Cooper JM. Cell proliferation and migration inside single cell arrays. Lab On a Chip. 15: 208-15. PMID 25340681 DOI: 10.1039/c4lc00774c  0.065
2003 Kesavapany S, Lau KF, Ackerley S, Banner SJ, Shemilt SJ, Cooper JD, Leigh PN, Shaw CE, McLoughlin DM, Miller CC. Identification of a novel, membrane-associated neuronal kinase, cyclin-dependent kinase 5/p35-regulated kinase. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 23: 4975-83. PMID 12832520 DOI: 10.1523/Jneurosci.23-12-04975.2003  0.065
2010 Dixon LM, Hardiman JR, Cooper JJ. The effects of spatial restriction on the behavior of rabbits (Oryctolagus cuniculus) Journal of Veterinary Behavior. 5: 302-308. DOI: 10.1016/J.JVEB.2010.07.002  0.065
2004 Cooper JW, Wang Y, Lee CS. Recent advances in capillary separations for proteomics. Electrophoresis. 25: 3913-26. PMID 15597423 DOI: 10.1002/elps.200406154  0.064
2011 Waltemath D, Adams R, Beard DA, Bergmann FT, Bhalla US, Britten R, Chelliah V, Cooling MT, Cooper J, Crampin EJ, Garny A, Hoops S, Hucka M, Hunter P, Klipp E, et al. Minimum Information About a Simulation Experiment (MIASE). Plos Computational Biology. 7: e1001122. PMID 21552546 DOI: 10.1371/Journal.Pcbi.1001122  0.064
2018 Pluta P, Roversi P, Bernardo-Seisdedos G, Rojas AL, Cooper JB, Gu S, Pickersgill RW, Millet O. Structural basis of pyrrole polymerization in human porphobilinogen deaminase. Biochimica Et Biophysica Acta. PMID 29908816 DOI: 10.1016/J.Bbagen.2018.06.013  0.064
2013 Cooper JA. Cell biology in neuroscience: mechanisms of cell migration in the nervous system. The Journal of Cell Biology. 202: 725-34. PMID 23999166 DOI: 10.1083/jcb.201305021  0.064
2002 Chattopadhyay S, Ito M, Cooper JD, Brooks AI, Curran TM, Powers JM, Pearce DA. An autoantibody inhibitory to glutamic acid decarboxylase in the neurodegenerative disorder Batten disease. Human Molecular Genetics. 11: 1421-31. PMID 12023984 DOI: 10.1093/hmg/11.12.1421  0.064
2003 Cooper JW, Chen J, Li Y, Lee CS. Membrane-based nanoscale proteolytic reactor enabling protein digestion, peptide separation, and protein identification using mass spectrometry. Analytical Chemistry. 75: 1067-74. PMID 12641224 DOI: 10.1021/Ac025768B  0.064
2022 Cui H, Glidle A, Cooper JM. Tracking Molecular Diffusion across Biomaterials' Interfaces Using Stimulated Raman Scattering. Acs Applied Materials & Interfaces. PMID 35801584 DOI: 10.1021/acsami.2c04444  0.064
2019 Khalid MA, Ray A, Cohen S, Tassieri M, Andriejus D, Tseng D, Reboud J, Ozcan A, Cooper JM. Computational Image Analysis of Guided Acoustic Waves Enables Rheological Assessment of Sub-Nanoliter Volumes. Acs Nano. PMID 31490647 DOI: 10.1021/Acsnano.9B03219  0.064
2018 Daly AC, Gavaghan D, Cooper J, Tavener S. Inference-based assessment of parameter identifiability in nonlinear biological models. Journal of the Royal Society, Interface. 15. PMID 30021928 DOI: 10.1098/Rsif.2018.0318  0.064
2017 Pilling C, Cooper JA. SOCS2 Binds to and Regulates EphA2 through Multiple Mechanisms. Scientific Reports. 7: 10838. PMID 28883622 DOI: 10.1038/s41598-017-11040-3  0.064
2011 Khoshmanesh K, Akagi J, Nahavandi S, Kalantar-zadeh K, Baratchi S, Williams DE, Cooper JM, Wlodkowic D. Interfacing cell-based assays in environmental scanning electron microscopy using dielectrophoresis. Analytical Chemistry. 83: 3217-21. PMID 21443166 DOI: 10.1021/ac2002142  0.063
2020 Clerx M, Cooling MT, Cooper J, Garny A, Moyle K, Nickerson DP, Nielsen PMF, Sorby H. CellML 2.0. Journal of Integrative Bioinformatics. PMID 32759406 DOI: 10.1515/jib-2020-0021  0.063
2015 Li Z, Clark AW, Cooper JM. Dual Color Plasmonic Pixels Create a Polarization Controlled Nano Color Palette. Acs Nano. PMID 26631346 DOI: 10.1021/acsnano.5b05411  0.063
2009 Kielar C, Wishart TM, Palmer A, Dihanich S, Wong AM, Macauley SL, Chan CH, Sands MS, Pearce DA, Cooper JD, Gillingwater TH. Molecular correlates of axonal and synaptic pathology in mouse models of Batten disease. Human Molecular Genetics. 18: 4066-80. PMID 19640925 DOI: 10.1093/hmg/ddp355  0.063
2007 Kielar C, Maddox L, Bible E, Pontikis CC, Macauley SL, Griffey MA, Wong M, Sands MS, Cooper JD. Successive neuron loss in the thalamus and cortex in a mouse model of infantile neuronal ceroid lipofuscinosis. Neurobiology of Disease. 25: 150-62. PMID 17046272 DOI: 10.1016/J.Nbd.2006.09.001  0.063
2009 Zagnoni M, Baroud CN, Cooper JM. Electrically initiated upstream coalescence cascade of droplets in a microfluidic flow. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 80: 046303. PMID 19905432 DOI: 10.1103/Physreve.80.046303  0.063
2013 Pommella A, Preziosi V, Caserta S, Cooper JM, Guido S, Tassieri M. Using optical tweezers for the characterization of polyelectrolyte solutions with very low viscoelasticity. Langmuir : the Acs Journal of Surfaces and Colloids. 29: 9224-30. PMID 23786307 DOI: 10.1021/La4015948  0.063
2017 Jossin Y, Lee M, Klezovitch O, Kon E, Cossard A, Lien WH, Fernandez TE, Cooper JA, Vasioukhin V. Llgl1 Connects Cell Polarity with Cell-Cell Adhesion in Embryonic Neural Stem Cells. Developmental Cell. PMID 28552558 DOI: 10.1016/J.Devcel.2017.05.002  0.063
2004 Cooper JM, Cubitt R, Dalgliesh RM, Gadegaard N, Glidle A, Hillman AR, Mortimer RJ, Ryder KS, Smith EL. Dynamic in situ electrochemical neutron reflectivity measurements. Journal of the American Chemical Society. 126: 15362-3. PMID 15563146 DOI: 10.1021/Ja044682S  0.063
2020 Na Y, Jiménez EC, Kon E, Cao H, Jossin Y, Cooper JA. Fbxo45 binds SPRY motifs in the extracellular domain of N-cadherin and regulates neuron migration during brain development. Molecular and Cellular Biology. PMID 32341084 DOI: 10.1128/Mcb.00539-19  0.063
2017 Chung WJ, Daemen A, Cheng JH, Long JE, Cooper JE, Wang BE, Tran C, Singh M, Gnad F, Modrusan Z, Foreman O, Junttila MR. Kras mutant genetically engineered mouse models of human cancers are genomically heterogeneous. Proceedings of the National Academy of Sciences of the United States of America. PMID 29203670 DOI: 10.1073/Pnas.1708391114  0.062
1993 Cooper JJ, Nicol CJ. Influence of neighbours on the development of locomotor stereotypies in the bank vole Applied Animal Behaviour Science. 38: 80. DOI: 10.1016/0168-1591(93)90051-P  0.062
2011 Haupt M, Blakeley MP, Teixeira SC, Mason SA, Mitchell EP, Cooper JB, Forsyth VT. Preliminary neutron crystallographic study of human transthyretin. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 67: 1428-31. PMID 22102249 DOI: 10.1107/S1744309111036244  0.062
2004 Cooper JJ, Albentosa MJ, Redgate SE. The 24 hour activity budgets of hens in furnished cages. British Poultry Science. S38-40. PMID 15222361 DOI: 10.1080/00071660410001698191  0.062
2002 Morris SM, Arden SD, Roberts RC, Kendrick-Jones J, Cooper JA, Luzio JP, Buss F. Myosin VI binds to and localises with Dab2, potentially linking receptor-mediated endocytosis and the actin cytoskeleton. Traffic (Copenhagen, Denmark). 3: 331-41. PMID 11967127 DOI: 10.1034/J.1600-0854.2002.30503.X  0.062
2007 Yin H, Pattrick N, Zhang X, Klauke N, Cordingley HC, Haswell SJ, Cooper JM. Quantitative comparison between microfluidic and microtiter plate formats for cell-based assays. Analytical Chemistry. 80: 179-85. PMID 18052343 DOI: 10.1021/AC701958Z  0.061
2015 Tassieri M, Del Giudice F, Robertson EJ, Jain N, Fries B, Wilson R, Glidle A, Greco F, Netti PA, Maffettone PL, Bicanic T, Cooper JM. Microrheology with optical tweezers: measuring the relative viscosity of solutions 'at a glance'. Scientific Reports. 5: 8831. PMID 25743468 DOI: 10.1038/Srep08831  0.061
2002 Morris SM, Tallquist MD, Rock CO, Cooper JA. Dual roles for the Dab2 adaptor protein in embryonic development and kidney transport Embo Journal. 21: 1555-1564. PMID 11927540 DOI: 10.1093/Emboj/21.7.1555  0.061
2004 Cooper JW, Lee CS. Integrated and ultrasensitive gel protein identification. Analytical Chemistry. 76: 2196-202. PMID 15080728 DOI: 10.1021/ac035318z  0.061
2011 Koch S, Molchanova SM, Wright AK, Edwards A, Cooper JD, Taira T, Gillingwater TH, Tyynelä J. Morphologic and functional correlates of synaptic pathology in the cathepsin D knockout mouse model of congenital neuronal ceroid lipofuscinosis. Journal of Neuropathology and Experimental Neurology. 70: 1089-96. PMID 22082660 DOI: 10.1097/NEN.0b013e318238fc28  0.061
2002 Cary LA, Klinghoffer RA, Sachsenmaier C, Cooper JA. Src catalytic but not scaffolding function is needed for integrin-regulated tyrosine phosphorylation, cell migration, and cell spreading Molecular and Cellular Biology. 22: 2427-2440. PMID 11909938 DOI: 10.1128/MCB.22.8.2427-2440.2002  0.061
2021 Gulla K, Cibelli N, Cooper JW, Fuller HC, Schneiderman Z, Witter S, Zhang Y, Changela A, Geng H, Hatcher C, Narpala S, Tsybovsky Y, Zhang B, Vrc Production Program, McDermott AB, et al. A non-affinity purification process for GMP production of prefusion-closed HIV-1 envelope trimers from clades A and C for clinical evaluation. Vaccine. PMID 34020817 DOI: 10.1016/j.vaccine.2021.04.063  0.061
2013 Bourquin Y, Cooper JM. Swimming using surface acoustic waves. Plos One. 8: e42686. PMID 23431358 DOI: 10.1371/journal.pone.0042686  0.061
2018 Hino K, Simó S, Cooper JA. Comparative analysis of cul5 and rbx2 expression in the developing and adult murine brain and their essentiality during mouse embryogenesis. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 30269386 DOI: 10.1002/dvdy.24675  0.061
2014 Tsai HJ, Huang CL, Chang YW, Huang DY, Lin CC, Cooper JA, Cheng JC, Tseng CP. Disabled-2 is required for efficient hemostasis and platelet activation by thrombin in mice. Arteriosclerosis, Thrombosis, and Vascular Biology. 34: 2404-12. PMID 25212232 DOI: 10.1161/ATVBAHA.114.302602  0.061
2011 Sirimuthu NM, Syme CD, Cooper JM. Investigation of the stability of labelled nanoparticles for SE(R)RS measurements in cells. Chemical Communications (Cambridge, England). 47: 4099-101. PMID 21359326 DOI: 10.1039/c0cc05723a  0.06
2006 Sandison ME, Cooper JM. Nanofabrication of electrode arrays by electron-beam and nanoimprint lithographies. Lab On a Chip. 6: 1020-5. PMID 16874372 DOI: 10.1039/b516598a  0.06
2019 Buechler MB, Kim KW, Onufer EJ, Williams JW, Little CC, Dominguez CX, Li Q, Sandoval W, Cooper JE, Harris CA, Junttila MR, Randolph GJ, Turley SJ. A Stromal Niche Defined by Expression of the Transcription Factor WT1 Mediates Programming and Homeostasis of Cavity-Resident Macrophages. Immunity. PMID 31231034 DOI: 10.1016/J.Immuni.2019.05.010  0.06
2003 Erskine PT, Coates L, Butler D, Youell JH, Brindley AA, Wood SP, Warren MJ, Shoolingin-Jordan PM, Cooper JB. X-ray structure of a putative reaction intermediate of 5-aminolaevulinic acid dehydratase Biochemical Journal. 373: 733-738. PMID 12777167 DOI: 10.1042/Bj20030513  0.06
2015 Soffe R, Tang SY, Baratchi S, Nahavandi S, Nasabi M, Cooper JM, Mitchell A, Khoshmanesh K. Controlled rotation and vibration of patterned cell clusters using dielectrophoresis. Analytical Chemistry. 87: 2389-95. PMID 25611070 DOI: 10.1021/ac5043335  0.06
2022 Xu J, Yi X, Jin G, Peng D, Fan G, Xu X, Chen X, Yin H, Cooper JM, Huang WE. High-Speed Diagnosis of Bacterial Pathogens at the Single Cell Level by Raman Microspectroscopy with Machine Learning Filters and Denoising Autoencoders. Acs Chemical Biology. PMID 35026119 DOI: 10.1021/acschembio.1c00834  0.06
2010 Zagnoni M, Anderson J, Cooper JM. Hysteresis in multiphase microfluidics at a T-junction. Langmuir : the Acs Journal of Surfaces and Colloids. 26: 9416-22. PMID 20465264 DOI: 10.1021/la1004243  0.06
2011 Khoshmanesh K, Kiss N, Nahavandi S, Evans CW, Cooper JM, Williams DE, Wlodkowic D. Trapping and imaging of micron-sized embryos using dielectrophoresis. Electrophoresis. 32: 3129-32. PMID 21792997 DOI: 10.1002/elps.201100160  0.06
2012 Mulkearns EE, Cooper JA. FCH domain only-2 organizes clathrin-coated structures and interacts with Disabled-2 for low-density lipoprotein receptor endocytosis. Molecular Biology of the Cell. 23: 1330-42. PMID 22323290 DOI: 10.1091/mbc.E11-09-0812  0.06
2017 Guo J, Erskine P, Coker AR, Wood SP, Cooper JB. Structural studies of domain movement in active-site mutants of porphobilinogen deaminase from Bacillus megaterium. Acta Crystallographica. Section F, Structural Biology Communications. 73: 612-620. PMID 29095155 DOI: 10.1107/S2053230X17015436  0.06
2016 Kwon YD, Georgiev IS, Ofek G, Zhang B, Asokan M, Bailer RT, Bao A, Caruso W, Chen X, Choe M, Druz A, Ko SY, Louder MK, McKee K, O'Dell S, ... ... Cooper JW, et al. Optimization of the Solubility of HIV-1-Neutralizing Antibody 10E8 through Somatic Variation and Structure-Based Design. Journal of Virology. PMID 27053554 DOI: 10.1128/Jvi.03246-15  0.06
2017 Dovey OM, Cooper JL, Mupo A, Grove CS, Lynn C, Conte N, Andrews RM, Pacharne S, Tzelepis K, Vijayabaskar MS, Green P, Rad R, Arends M, Wright P, Yusa K, et al. Molecular synergy underlies the co-occurrence patterns and phenotype of NPM1-mutant acute myeloid leukemia. Blood. PMID 28835438 DOI: 10.1182/blood-2017-01-760595  0.06
2014 Cooper J, Giancotti FG. Molecular insights into NF2/Merlin tumor suppressor function. Febs Letters. 588: 2743-52. PMID 24726726 DOI: 10.1016/J.Febslet.2014.04.001  0.06
2018 Guo J, Coker AR, Wood SP, Cooper JB, Keegan RM, Ahmad N, Muhammad MA, Rashid N, Akhtar M. Structure and function of the type III pullulan hydrolase from Thermococcus kodakarensis. Acta Crystallographica. Section D, Structural Biology. 74: 305-314. PMID 29652257 DOI: 10.1107/S2059798318001754  0.06
2023 Xu G, Yang H, Qiu J, Reboud J, Zhen L, Ren W, Xu H, Cooper JM, Gu H. Sequence terminus dependent PCR for site-specific mutation and modification detection. Nature Communications. 14: 1169. PMID 36859350 DOI: 10.1038/s41467-023-36884-4  0.059
2014 Li W, Cooper J, Zhou L, Yang C, Erdjument-Bromage H, Zagzag D, Snuderl M, Ladanyi M, Hanemann CO, Zhou P, Karajannis MA, Giancotti FG. Merlin/NF2 loss-driven tumorigenesis linked to CRL4(DCAF1)-mediated inhibition of the hippo pathway kinases Lats1 and 2 in the nucleus. Cancer Cell. 26: 48-60. PMID 25026211 DOI: 10.1016/J.Ccr.2014.05.001  0.059
2010 Li Y, Hu J, Höfer K, Wong AM, Cooper JD, Birnbaum SG, Hammer RE, Hofmann SL. DHHC5 interacts with PDZ domain 3 of post-synaptic density-95 (PSD-95) protein and plays a role in learning and memory. The Journal of Biological Chemistry. 285: 13022-31. PMID 20178993 DOI: 10.1074/jbc.M109.079426  0.059
2024 Huyen DT, Reboud J, Quyen DT, Cooper JM, Velavan TP, Trung NT, Song LH. An isothermal CRISPR- based lateral flow assay for detection of Neisseria meningitidis. Annals of Clinical Microbiology and Antimicrobials. 23: 28. PMID 38555443 DOI: 10.1186/s12941-024-00688-1  0.059
2010 Iczkiewicz J, Broom L, Cooper JD, Wong AM, Rose S, Jenner P. The RGD-containing peptide fragment of osteopontin protects tyrosine hydroxylase positive cells against toxic insult in primary ventral mesencephalic cultures and in the rat substantia nigra. Journal of Neurochemistry. 114: 1792-804. PMID 20626561 DOI: 10.1111/J.1471-4159.2010.06896.X  0.059
2016 Xu G, Zhao H, Cooper JM, Reboud J. A capillary-based multiplexed isothermal nucleic acid-based test for sexually transmitted diseases in patients. Chemical Communications (Cambridge, England). 52: 12187-12190. PMID 27722490 DOI: 10.1039/c6cc05679b  0.058
2011 Hu M, Cooper J, Beamish R, Jones E, Butterworth R, Catterall L, Ben-Shlomo Y. How well do we recognise non-motor symptoms in a British Parkinson's disease population? Journal of Neurology. 258: 1513-7. PMID 21394490 DOI: 10.1007/s00415-011-5972-6  0.058
2017 Cooper J, Xu Q, Zhou L, Pavlovic M, Ojeda V, Moulick K, de Stanchina E, Poirier JT, Zauderer M, Rudin CM, Karajannis MA, Hanemann CO, Giancotti FG. Combined Inhibition of NEDD8-Activating Enzyme and mTOR Suppresses NF2 Loss-Driven Tumorigenesis. Molecular Cancer Therapeutics. PMID 28468780 DOI: 10.1158/1535-7163.Mct-16-0821  0.058
2020 Le SQ, Nestrasil I, Kan SH, Egeland M, Cooper JD, Elashoff D, Guo R, Tolar J, Yee JK, Dickson PI. Myelin and Lipid Composition of the Corpus Callosum in Mucopolysaccharidosis Type I Mice. Lipids. PMID 32537944 DOI: 10.1002/Lipd.12261  0.058
2010 Li W, You L, Cooper J, Schiavon G, Pepe-Caprio A, Zhou L, Ishii R, Giovannini M, Hanemann CO, Long SB, Erdjument-Bromage H, Zhou P, Tempst P, Giancotti FG. Merlin/NF2 suppresses tumorigenesis by inhibiting the E3 ubiquitin ligase CRL4(DCAF1) in the nucleus. Cell. 140: 477-90. PMID 20178741 DOI: 10.1016/J.Cell.2010.01.029  0.058
2003 Albentosa M, Cooper J. 2003 Spring Meeting of the WPSA UK Branch British Poultry Science. 44: 5-6. DOI: 10.1080/000716603000085472  0.058
2018 Le SQ, Kan SH, Clarke D, Sanghez V, Egeland M, Vondrak KN, Doherty TM, Vera MU, Iacovino M, Cooper JD, Sands MS, Dickson PI. A Humoral Immune Response Alters the Distribution of Enzyme Replacement Therapy in Murine Mucopolysaccharidosis Type I. Molecular Therapy. Methods & Clinical Development. 8: 42-51. PMID 29159202 DOI: 10.1016/j.omtm.2017.09.008  0.058
2011 Cai H, Smith DA, Memarzadeh S, Lowell CA, Cooper JA, Witte ON. Differential transformation capacity of Src family kinases during the initiation of prostate cancer. Proceedings of the National Academy of Sciences of the United States of America. 108: 6579-84. PMID 21464326 DOI: 10.1073/Pnas.1103904108  0.057
2019 Cooper J, Giancotti FG. Integrin Signaling in Cancer: Mechanotransduction, Stemness, Epithelial Plasticity, and Therapeutic Resistance. Cancer Cell. 35: 347-367. PMID 30889378 DOI: 10.1016/j.ccell.2019.01.007  0.057
2022 Cai CX, Doria-Rose NA, Schneck NA, Ivleva VB, Tippett B, Shadrick WR, O'Connell S, Cooper JW, Schneiderman Z, Zhang B, Gowetski DB, Blackstock D, Demirji J, Lin BC, Gorman J, et al. Tyrosine O-sulfation proteoforms affect HIV-1 monoclonal antibody potency. Scientific Reports. 12: 8433. PMID 35589938 DOI: 10.1038/s41598-022-12423-x  0.057
2011 Vassiliou GS, Cooper JL, Rad R, Li J, Rice S, Uren A, Rad L, Ellis P, Andrews R, Banerjee R, Grove C, Wang W, Liu P, Wright P, Arends M, et al. Mutant nucleophosmin and cooperating pathways drive leukemia initiation and progression in mice. Nature Genetics. 43: 470-5. PMID 21441929 DOI: 10.1038/Ng.796  0.057
2002 Park C, Finger JH, Cooper JA, Ackerman SL. The cerebellar deficient folia (cdf) gene acts intrinsically in Purkinje cell migrations Genesis. 32: 32-41. PMID 11835672 DOI: 10.1002/Gene.10024  0.057
2021 Zaman A, Wu X, Lemoff A, Yadavalli S, Lee J, Wang C, Cooper J, McMillan EA, Yeaman C, Mirzaei H, White MA, Bivona TG. Exocyst protein subnetworks integrate Hippo and mTOR signaling to promote virus detection and cancer. Cell Reports. 36: 109491. PMID 34348154 DOI: 10.1016/j.celrep.2021.109491  0.057
2017 Guo J, Zhang W, Coker AR, Wood SP, Cooper JB, Ahmad S, Ali S, Rashid N, Akhtar M. Structure of the family B DNA polymerase from the hyperthermophilic archaeon Pyrobaculum calidifontis. Acta Crystallographica. Section D, Structural Biology. 73: 420-427. PMID 28471366 DOI: 10.1107/S2059798317004090  0.057
2014 Witte C, Kremer C, Chanasakulniyom M, Reboud J, Wilson R, Cooper JM, Neale SL. Spatially selecting a single cell for lysis using light-induced electric fields. Small (Weinheim An Der Bergstrasse, Germany). 10: 3026-31. PMID 24719234 DOI: 10.1002/smll.201400247  0.057
2002 Chaudhary A, Brugge JS, Cooper JA. Direct phosphorylation of focal adhesion kinase by c-Src: evidence using a modified nucleotide pocket kinase and ATP analog. Biochemical and Biophysical Research Communications. 294: 293-300. PMID 12051709 DOI: 10.1016/S0006-291X(02)00475-8  0.057
2021 Pacharne S, Dovey OM, Cooper JL, Gu M, Friedrich MJ, Rajan SS, Barenboim M, Collord G, Vijayabaskar MS, Ponstingl H, De Braekeleer E, Bautista R, Mazan M, Rad R, Tzelepis K, et al. SETBP1 overexpression acts in the place of class-defining mutations to drive FLT3-ITD-mutant AML. Blood Advances. 5: 2412-2425. PMID 33956058 DOI: 10.1182/bloodadvances.2020003443  0.056
2013 Cheng C, Ansari MM, Cooper JA, Gong X. EphA2 and Src regulate equatorial cell morphogenesis during lens development. Development (Cambridge, England). 140: 4237-45. PMID 24026120 DOI: 10.1242/dev.100727  0.056
2002 Bunting KA, Cooper JB, Tickle IJ, Young DB. Engineering of an intersubunit disulfide bridge in the iron-superoxide dismutase of Mycobacterium tuberculosis. Archives of Biochemistry and Biophysics. 397: 69-76. PMID 11747311 DOI: 10.1006/abbi.2001.2635  0.056
2011 Mirams GR, Cui Y, Sher A, Fink M, Cooper J, Heath BM, McMahon NC, Gavaghan DJ, Noble D. Simulation of multiple ion channel block provides improved early prediction of compounds' clinical torsadogenic risk. Cardiovascular Research. 91: 53-61. PMID 21300721 DOI: 10.1093/cvr/cvr044  0.056
2009 Limaye S, Cooper J. The right scan at the right time: reversible posterior leukoencephalopathy syndrome mimicking bilateral occipital lobe infarcts. Age and Ageing. 38: 483-4. PMID 19276096 DOI: 10.1093/ageing/afp026  0.056
2016 Yee AW, Moulin M, Breteau N, Haertlein M, Mitchell EP, Cooper JB, Boeri Erba E, Forsyth VT. Impact of Deuteration on the Assembly Kinetics of Transthyretin Monitored by Native Mass Spectrometry and Implications for Amyloidoses. Angewandte Chemie (International Ed. in English). PMID 27311939 DOI: 10.1002/Anie.201602747  0.056
2015 Mampallil D, Reboud J, Wilson R, Wylie D, Klug DR, Cooper JM. Acoustic suppression of the coffee-ring effect. Soft Matter. 11: 7207-13. PMID 26264649 DOI: 10.1039/c5sm01196e  0.055
2011 Tomanicek SJ, Wang KK, Weiss KL, Blakeley MP, Cooper J, Chen Y, Coates L. The active site protonation states of perdeuterated Toho-1 β-lactamase determined by neutron diffraction support a role for Glu166 as the general base in acylation. Febs Letters. 585: 364-8. PMID 21168411 DOI: 10.1016/j.febslet.2010.12.017  0.055
2021 Guo J, Keegan RM, Rigden DJ, Erskine PT, Wood SP, Li S, Cooper JB. The X-ray structure of juvenile hormone diol kinase from the silkworm Bombyx mori. Acta Crystallographica. Section F, Structural Biology Communications. 77: 465-472. PMID 34866602 DOI: 10.1107/S2053230X21012012  0.055
2017 Shyng C, Nelvagal HR, Dearborn JT, Tyynelä J, Schmidt RE, Sands MS, Cooper JD. Synergistic effects of treating the spinal cord and brain in CLN1 disease. Proceedings of the National Academy of Sciences of the United States of America. PMID 28673981 DOI: 10.1073/Pnas.1701832114  0.055
2009 Cooper JB, Cohen EE. Mechanisms of resistance to EGFR inhibitors in head and neck cancer. Head & Neck. 31: 1086-94. PMID 19378324 DOI: 10.1002/hed.21109  0.055
2022 Gupta S, Dovey OM, Domingues AF, Cyran OW, Cash CM, Giotopoulos G, Rak J, Cooper J, Gozdecka M, Dijkhuis L, Asby RJ, Al-Jabery N, Hernandez-Hernandez V, Prabakaran S, Huntly BJ, et al. Transcriptional variability accelerates preleukemia by cell diversification and perturbation of protein synthesis. Science Advances. 8: eabn4886. PMID 35921412 DOI: 10.1126/sciadv.abn4886  0.055
1994 Cooper JJ, Nicol CJ. Neighbour effects on the development of locomotor stereotypies in bank voles, Clethrionomys glareolus Animal Behaviour. 47: 214-216. DOI: 10.1006/anbe.1994.1025  0.055
2011 Bourquin Y, Reboud J, Wilson R, Zhang Y, Cooper JM. Integrated immunoassay using tuneable surface acoustic waves and lensfree detection. Lab On a Chip. 11: 2725-30. PMID 21725557 DOI: 10.1039/c1lc20320g  0.055
2009 Bernabeu MO, Bordas R, Pathmanathan P, Pitt-Francis J, Cooper J, Garny A, Gavaghan DJ, Rodriguez B, Southern JA, Whiteley JP. Chaste: Incorporating a novel multi-scale spatial and temporal algorithm into a large-scale open source library Philosophical Transactions of the Royal Society a: Mathematical, Physical and Engineering Sciences. 367: 1907-1930. PMID 19380318 DOI: 10.1098/rsta.2008.0309  0.055
2014 Vernon AC, Crum WR, Lerch JP, Chege W, Natesan S, Modo M, Cooper JD, Williams SC, Kapur S. Reduced cortical volume and elevated astrocyte density in rats chronically treated with antipsychotic drugs-linking magnetic resonance imaging findings to cellular pathology. Biological Psychiatry. 75: 982-90. PMID 24143881 DOI: 10.1016/J.Biopsych.2013.09.012  0.054
2010 Wilson R, Bowden SA, Parnell J, Cooper JM. Signal enhancement of surface enhanced Raman scattering and surface enhanced resonance Raman scattering using in situ colloidal synthesis in microfluidics. Analytical Chemistry. 82: 2119-23. PMID 20121214 DOI: 10.1021/Ac100060G  0.054
2015 Vandavasi VG, Weiss KL, Cooper JB, Erskine PT, Tomanicek SJ, Ostermann A, Schrader TE, Ginell SL, Coates L. Exploring the Mechanism of β-Lactam Ring Protonation in the Class A β-lactamase Acylation Mechanism Using Neutron and X-ray Crystallography. Journal of Medicinal Chemistry. PMID 26630115 DOI: 10.1021/acs.jmedchem.5b01215  0.054
2015 Roberts DA, Pilgrim BS, Cooper JD, Ronson TK, Zarra S, Nitschke JR. Post-assembly Modification of Tetrazine-Edged Fe(II)4L6 Tetrahedra. Journal of the American Chemical Society. 137: 10068-71. PMID 26252626 DOI: 10.1021/Jacs.5B05080  0.054
2009 Clark AW, Glidle A, Cumming DR, Cooper JM. Plasmonic split-ring resonators as dichroic nanophotonic DNA biosensors. Journal of the American Chemical Society. 131: 17615-9. PMID 19911784 DOI: 10.1021/Ja905910Q  0.054
2017 Guo J, Coker AR, Wood SP, Cooper JB, Chohan SM, Rashid N, Akhtar M. Structure and function of the thermostable L-asparaginase from Thermococcus kodakarensis. Acta Crystallographica. Section D, Structural Biology. 73: 889-895. PMID 29095161 DOI: 10.1107/S2059798317014711  0.054
2010 Matsuki T, Matthews RT, Cooper JA, van der Brug MP, Cookson MR, Hardy JA, Olson EC, Howell BW. Reelin and stk25 have opposing roles in neuronal polarization and dendritic Golgi deployment. Cell. 143: 826-36. PMID 21111240 DOI: 10.1016/J.Cell.2010.10.029  0.054
2007 Wilson R, Monaghan P, Bowden SA, Parnell J, Cooper JM. Surface-enhanced Raman signatures of pigmentation of cyanobacteria from within geological samples in a spectroscopic-microfluidic flow cell. Analytical Chemistry. 79: 7036-41. PMID 17711297 DOI: 10.1021/ac070994c  0.053
2003 Arnaud L, Ballif BA, Förster E, Cooper JA. Fyn tyrosine kinase is a critical regulator of disabled-1 during brain development. Current Biology : Cb. 13: 9-17. PMID 12526739 DOI: 10.1016/s0960-9822(02)01397-0  0.053
2013 Reboud J, Auchinvole C, Syme CD, Wilson R, Cooper JM. Acoustically controlled enhancement of molecular sensing to assess oxidative stress in cells. Chemical Communications (Cambridge, England). 49: 2918-20. PMID 23459663 DOI: 10.1039/C3Cc37931K  0.053
2008 Walter RB, Häusermann P, Raden BW, Teckchandani AM, Kamikura DM, Bernstein ID, Cooper JA. Phosphorylated ITIMs enable ubiquitylation of an inhibitory cell surface receptor. Traffic (Copenhagen, Denmark). 9: 267-79. PMID 18062779 DOI: 10.1111/j.1600-0854.2007.00682.x  0.053
2023 Ibarra-Chávez R, Reboud J, Penadés JR, Cooper JM. Phage-Inducible Chromosomal Islands as a Diagnostic Platform to Capture and Detect Bacterial Pathogens. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). e2301643. PMID 37358000 DOI: 10.1002/advs.202301643  0.053
2015 Xu G, Gunson RN, Cooper JM, Reboud J. Rapid ultrasonic isothermal amplification of DNA with multiplexed melting analysis – applications in the clinical diagnosis of sexually transmitted diseases. Chemical Communications (Cambridge, England). 51: 2589-92. PMID 25569801 DOI: 10.1039/c4cc08389j  0.052
2017 Cooper J, Giancotti FG. New evidence for non-canonical Hippo signaling in cancer. Cell Research. PMID 28244491 DOI: 10.1038/cr.2017.27  0.052
2016 Teckchandani A, Cooper JA. The ubiquitin-proteasome system regulates focal adhesions at the leading edge of migrating cells. Elife. 5. PMID 27656905 DOI: 10.7554/eLife.17440  0.052
2010 Syme CD, Sirimuthu NM, Faley SL, Cooper JM. SERS mapping of nanoparticle labels in single cells using a microfluidic chip. Chemical Communications (Cambridge, England). 46: 7921-3. PMID 20859575 DOI: 10.1039/C0Cc02209H  0.052
2006 Coates L, Erskine PT, Mall S, Gill R, Wood SP, Myles DA, Cooper JB. X-ray, neutron and NMR studies of the catalytic mechanism of aspartic proteinases. European Biophysics Journal : Ebj. 35: 559-66. PMID 16673078 DOI: 10.1007/s00249-006-0065-7  0.052
2004 Wang L, Hammond P, Johannesson E, Tang TB, Astaras A, Cumming DR, Beaumont SP, Murray AF, Cooper JM. An on-chip programmable instrumentation microsystem for gastrointestinal telemetry applications. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 3: 2109-12. PMID 17272139 DOI: 10.1109/IEMBS.2004.1403619  0.052
2015 O'Neill AS, Terry SY, Brown K, Meader L, Wong AM, Cooper JD, Crocker PR, Wong W, Mullen GE. Non-invasive molecular imaging of inflammatory macrophages in allograft rejection. Ejnmmi Research. 5: 69. PMID 26611870 DOI: 10.1186/s13550-015-0146-7  0.052
2016 Keegan R, Waterman DG, Hopper DJ, Coates L, Taylor G, Guo J, Coker AR, Erskine PT, Wood SP, Cooper JB. The 1.1 Å resolution structure of a periplasmic phosphate-binding protein from Stenotrophomonas maltophilia: a crystallization contaminant identified by molecular replacement using the entire Protein Data Bank. Acta Crystallographica. Section D, Structural Biology. 72: 933-43. PMID 27487824 DOI: 10.1107/S2059798316010433  0.052
2011 Clark AW, Cooper JM. Nanogap ring antennae as plasmonically coupled SERRS substrates. Small (Weinheim An Der Bergstrasse, Germany). 7: 119-25. PMID 21105051 DOI: 10.1002/smll.201001438  0.051
2013 Cooper JM, Bodemann BO, White MA. The RalGEF/Ral pathway: evaluating an intervention opportunity for Ras cancers. The Enzymes. 34: 137-56. PMID 25034103 DOI: 10.1016/B978-0-12-420146-0.00006-8  0.051
2017 Palmieri M, Pal R, Nelvagal HR, Lotfi P, Stinnett GR, Seymour ML, Chaudhury A, Bajaj L, Bondar VV, Bremner L, Saleem U, Tse DY, Sanagasetti D, Wu SM, Neilson JR, ... ... Cooper JD, et al. Corrigendum: mTORC1-independent TFEB activation via Akt inhibition promotes cellular clearance in neurodegenerative storage diseases. Nature Communications. 8: 15793. PMID 28607479 DOI: 10.1038/Ncomms15793  0.051
2020 Ray A, Khalid MA, Demčenko A, Daloglu M, Tseng D, Reboud J, Cooper JM, Ozcan A. Holographic detection of nanoparticles using acoustically actuated nanolenses. Nature Communications. 11: 171. PMID 31949134 DOI: 10.1038/S41467-019-13802-1  0.051
2024 Lyu M, Xu G, Zhou J, Reboud J, Wang Y, Lai H, Chen Y, Zhou Y, Zhu G, Cooper JM, Ying B. Single-Cell Sequencing Reveals Functional Alterations in Tuberculosis. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). e2305592. PMID 38192178 DOI: 10.1002/advs.202305592  0.051
2020 Mao K, Yang Z, Zhang H, Li X, Cooper JM. Paper-based nanosensors to evaluate community-wide illicit drug use for wastewater-based epidemiology. Water Research. 189: 116559. PMID 33161329 DOI: 10.1016/j.watres.2020.116559  0.051
2016 Vandavasi VG, Langan PS, Weiss KL, Parks JM, Cooper JB, Ginell SL, Coates L. Active Site Protonation States in an Acyl-enzyme Intermediate of a Class A β-lactamase with a Monobactam Substrate. Antimicrobial Agents and Chemotherapy. PMID 27795378 DOI: 10.1128/Aac.01636-16  0.051
2011 Zarowna-Dabrowska A, Neale SL, Massoubre D, McKendry J, Rae BR, Henderson RK, Rose MJ, Yin H, Cooper JM, Gu E, Dawson MD. Miniaturized optoelectronic tweezers controlled by GaN micro-pixel light emitting diode arrays. Optics Express. 19: 2720-8. PMID 21369093 DOI: 10.1364/OE.19.002720  0.05
2019 Schneck NA, Ivleva VB, Rosales-Zavala E, Wang X, Gollapudi D, Cooper JW, Lei QP. Using LC-MS to Identify Clipping in Self-Assembled Nanoparticles During Vaccine Development. Journal of the American Society For Mass Spectrometry. PMID 31595432 DOI: 10.1007/s13361-019-02318-z  0.05
2021 Dowrick T, Ahmed M, Thompson S, Hetherington J, Cooper J, Clarkson M. CMakeCatchTemplate: A C++ template project. Journal of Open Research Software. 9: 17. PMID 34434553 DOI: 10.5334/jors.319  0.05
2003 Ruano JM, Glidle A, Cleary A, Walmsley A, Aitchison JS, Cooper JM. Design and fabrication of a silica on silicon integrated optical biochip as a fluorescence microarray platform. Biosensors & Bioelectronics. 18: 175-84. PMID 12485763 DOI: 10.1016/S0956-5663(02)00170-7  0.05
2019 Crank MC, Ruckwardt TJ, Chen M, Morabito KM, Phung E, Costner PJ, Holman LA, Hickman SP, Berkowitz NM, Gordon IJ, Yamshchikov GV, Gaudinski MR, Kumar A, Chang LA, Moin SM, ... ... Cooper JW, et al. A proof of concept for structure-based vaccine design targeting RSV in humans. Science (New York, N.Y.). 365: 505-509. PMID 31371616 DOI: 10.1126/science.aav9033  0.049
2002 Li Y, Cooper JW, Lee CS. Miniaturized membrane-based reversed-phase chromatography and enzyme reactor for protein digestion, peptide separation, and protein identification using electrospray ionization mass spectrometry. Journal of Chromatography. A. 979: 241-7. PMID 12498254 DOI: 10.1016/S0021-9673(02)01242-6  0.049
2002 Cooper JW, Gao J, Lee CS. Gel protein capillary extraction apparatus. electronic protein transfer. Analytical Chemistry. 74: 1182-6. PMID 11924982 DOI: 10.1021/Ac0110000  0.049
2012 Teckchandani A, Mulkearns EE, Randolph TW, Toida N, Cooper JA. The clathrin adaptor Dab2 recruits EH domain scaffold proteins to regulate integrin β1 endocytosis. Molecular Biology of the Cell. 23: 2905-16. PMID 22648170 DOI: 10.1091/mbc.E11-12-1007  0.049
2020 Tao R, McHale G, Reboud J, Cooper JM, Torun H, Luo J, Luo J, Yang X, Zhou J, Canyelles-Pericas P, Wu Q, Fu Y. Hierarchical nanotexturing enables acoustofluidics on slippery yet sticky, flexible surfaces. Nano Letters. PMID 32233442 DOI: 10.1021/Acs.Nanolett.0C00005  0.049
2016 Chataigner L, Guo J, Erskine PT, Coker AR, Wood SP, Gombos Z, Cooper JB. Binding of Gd(3+) to the neuronal signalling protein calexcitin identifies an exchangeable Ca(2+)-binding site. Acta Crystallographica. Section F, Structural Biology Communications. 72: 276-281. PMID 27050260 DOI: 10.1107/S2053230X16003526  0.049
2010 Pathmanathan P, Bernabeu MO, Bordas R, Cooper J, Garny A, Pitt-Francis JM, Whiteley JP, Gavaghan DJ. A numerical guide to the solution of the bidomain equations of cardiac electrophysiology Progress in Biophysics and Molecular Biology. 102: 136-155. PMID 20553747 DOI: 10.1016/j.pbiomolbio.2010.05.006  0.049
2010 Bourquin Y, Reboud J, Wilson R, Cooper JM. Tuneable surface acoustic waves for fluid and particle manipulations on disposable chips. Lab On a Chip. 10: 1898-901. PMID 20535420 DOI: 10.1039/c004506c  0.048
2006 Cooper JM, McAndrews PT, LaPrade RF. Posterolateral corner injuries of the knee: Anatomy, diagnosis, and treatment Sports Medicine and Arthroscopy Review. 14: 213-220. PMID 17135971 DOI: 10.1097/01.jsa.0000212324.46430.60  0.048
2021 Cui H, Glidle A, Cooper JM. Spatial Heterodyne Offset Raman Spectroscopy Enabling Rapid, High Sensitivity Characterization of Materials' Interfaces. Small (Weinheim An Der Bergstrasse, Germany). e2101114. PMID 34013665 DOI: 10.1002/smll.202101114  0.048
2009 von Schantz C, Kielar C, Hansen SN, Pontikis CC, Alexander NA, Kopra O, Jalanko A, Cooper JD. Progressive thalamocortical neuron loss in Cln5 deficient mice: Distinct effects in Finnish variant late infantile NCL. Neurobiology of Disease. 34: 308-19. PMID 19385065 DOI: 10.1016/j.nbd.2009.02.001  0.048
2011 Wlodkowic D, Khoshmanesh K, Sharpe JC, Darzynkiewicz Z, Cooper JM. Apoptosis goes on a chip: advances in the microfluidic analysis of programmed cell death. Analytical Chemistry. 83: 6439-46. PMID 21630641 DOI: 10.1021/Ac200588G  0.048
2015 Henry SL, Withers JM, Singh I, Cooper JM, Clark AW, Burley GA, Cogdell RJ. DNA-directed spatial assembly of photosynthetic light-harvesting proteins. Organic & Biomolecular Chemistry. PMID 26660647 DOI: 10.1039/c5ob02351c  0.048
2016 Agnew G, Grier A, Taimre T, Lim YL, Bertling K, Ikonić Z, Valavanis A, Dean P, Cooper J, Khanna SP, Lachab M, Linfield EH, Davies AG, Harrison P, Indjin D, et al. Model for a pulsed terahertz quantum cascade laser under optical feedback. Optics Express. 24: 20554-20570. PMID 27607659  0.048
2018 Gozdecka M, Meduri E, Mazan M, Tzelepis K, Dudek M, Knights AJ, Pardo M, Yu L, Choudhary JS, Metzakopian E, Iyer V, Yun H, Park N, Varela I, Bautista R, ... ... Cooper J, et al. UTX-mediated enhancer and chromatin remodeling suppresses myeloid leukemogenesis through noncatalytic inverse regulation of ETS and GATA programs. Nature Genetics. PMID 29736013 DOI: 10.1038/S41588-018-0114-Z  0.047
2016 Thomas JC, Cooper JM, Clayton NS, Wang C, White MA, Abell C, Owen D, Mott HR. Inhibition of Ral GTPases Using a Stapled Peptide Approach. The Journal of Biological Chemistry. PMID 27334922 DOI: 10.1074/Jbc.M116.720243  0.047
2003 Lee JH, Lau KF, Perkinton MS, Standen CL, Shemilt SJ, Mercken L, Cooper JD, McLoughlin DM, Miller CC. The neuronal adaptor protein X11alpha reduces Abeta levels in the brains of Alzheimer's APPswe Tg2576 transgenic mice. The Journal of Biological Chemistry. 278: 47025-9. PMID 12970358 DOI: 10.1074/Jbc.M300503200  0.047
2011 Sirimuthu NM, Syme CD, Cooper JM. Monitoring the uptake and redistribution of metal nanoparticles during cell culture using surface-enhanced Raman scattering spectroscopy. Analytical Chemistry. 82: 7369-73. PMID 20695440 DOI: 10.1021/ac101480t  0.047
2016 Grier A, Dean P, Valavanis A, Keeley J, Kundu I, Cooper JD, Agnew G, Taimre T, Lim YL, Bertling K, Rakić AD, Li LH, Harrison P, Linfield EH, Ikonić Z, et al. Origin of terminal voltage variations due to self-mixing in terahertz frequency quantum cascade lasers. Optics Express. 24: 21948-21956. PMID 27661929  0.047
2007 Cooper JJ. Equine learning behaviour: common knowledge and systematic research. Behavioural Processes. 76: 24-6; discussion 57-. PMID 17412528 DOI: 10.1016/j.beproc.2006.12.009  0.047
2009 Laszlo GS, Cooper JA. Restriction of Src activity by Cullin-5. Current Biology : Cb. 19: 157-62. PMID 19147357 DOI: 10.1016/j.cub.2008.12.007  0.047
2014 Teckchandani A, Laszlo GS, Simó S, Shah K, Pilling C, Strait AA, Cooper JA. Cullin 5 destabilizes Cas to inhibit Src-dependent cell transformation. Journal of Cell Science. 127: 509-20. PMID 24284072 DOI: 10.1242/jcs.127829  0.046
2013 Singh I, Wendeln C, Clark AW, Cooper JM, Ravoo BJ, Burley GA. Sequence-selective detection of double-stranded DNA sequences using pyrrole-imidazole polyamide microarrays. Journal of the American Chemical Society. 135: 3449-57. PMID 23379840 DOI: 10.1021/ja309677h  0.046
2008 Vinke CM, Hansen SW, Mononen J, Korhonen H, Cooper JJ, Mohaibes M, Bakken M, Spruijt BM. To swim or not to swim: An interpretation of farmed mink's motivation for a water bath Applied Animal Behaviour Science. 111: 1-27. DOI: 10.1016/J.APPLANIM.2008.02.006  0.046
2010 Tassieri M, Gibson GM, Evans RM, Yao AM, Warren R, Padgett MJ, Cooper JM. Measuring storage and loss moduli using optical tweezers: broadband microrheology. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 81: 026308. PMID 20365652  0.046
2005 Cooper J, Feely M. The difficulty in diagnosing non-convulsive status epilepticus during routine medical practice. Age and Ageing. 33: 518-9; author reply . PMID 15315926 DOI: 10.1093/ageing/afh161  0.046
2005 Oswald MJ, Palmer DN, Kay GW, Shemilt SJ, Rezaie P, Cooper JD. Glial activation spreads from specific cerebral foci and precedes neurodegeneration in presymptomatic ovine neuronal ceroid lipofuscinosis (CLN6). Neurobiology of Disease. 20: 49-63. PMID 16137566 DOI: 10.1016/j.nbd.2005.01.025  0.046
2011 Irvine EE, Drinkwater L, Radwanska K, Al-Qassab H, Smith MA, O'Brien M, Kielar C, Choudhury AI, Krauss S, Cooper JD, Withers DJ, Giese KP. Insulin receptor substrate 2 is a negative regulator of memory formation. Learning & Memory (Cold Spring Harbor, N.Y.). 18: 375-83. PMID 21597043 DOI: 10.1101/lm.2111311  0.046
2022 Liu Y, Pinto F, Wan X, Yang Z, Peng S, Li M, Cooper JM, Xie Z, French CE, Wang B. Reprogrammed tracrRNAs enable repurposing of RNAs as crRNAs and sequence-specific RNA biosensors. Nature Communications. 13: 1937. PMID 35410423 DOI: 10.1038/s41467-022-29604-x  0.046
2005 Bros V, Shemilt SJ, Cooper JD, Skaper SD, Leigh PN, Gallo JM. A novel somatodendritic marker defined by a peptide derived from the ALS2 protein. Neuroreport. 15: 2155-9. PMID 15371724 DOI: 10.1097/00001756-200410050-00002  0.046
2010 Blanco-Gomez G, Flendrig LM, Cooper JM. Hysteresis and reversibility of a superhydrophobic photopatternable silicone elastomer. Langmuir : the Acs Journal of Surfaces and Colloids. 26: 7248-53. PMID 20180571 DOI: 10.1021/la904374g  0.045
2010 Simó S, Jossin Y, Cooper JA. Cullin 5 regulates cortical layering by modulating the speed and duration of Dab1-dependent neuronal migration. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 5668-76. PMID 20410119 DOI: 10.1523/JNEUROSCI.0035-10.2010  0.045
2018 Li Q, Ingram L, Kim S, Beharry Z, Cooper JA, Cai H. Paracrine Fibroblast Growth Factor Initiates Oncogenic Synergy with Epithelial FGFR/Src Transformation in Prostate Tumor Progression. Neoplasia (New York, N.Y.). 20: 233-243. PMID 29444487 DOI: 10.1016/j.neo.2018.01.006  0.045
2020 Daemen A, Cooper J, Myrta S, Wongchenko MJ, Lin E, Long JE, Foreman O, Modrusan Z, Tremayne JR, de la Cruz CC, Merchant M, Martin SE, Yan Y, Junttila MR. Transcriptional subtypes resolve tumor heterogeneity and identify vulnerabilities to MEK inhibition in lung adenocarcinoma. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 33023953 DOI: 10.1158/1078-0432.CCR-20-1835  0.045
2015 Cooper J, Vik JO, Waltemath D. A call for virtual experiments: accelerating the scientific process. Progress in Biophysics and Molecular Biology. 117: 99-106. PMID 25433232 DOI: 10.1016/j.pbiomolbio.2014.10.001  0.045
2009 Keen S, Yao A, Leach J, Di Leonardo R, Saunter C, Love G, Cooper J, Padgett M. Multipoint viscosity measurements in microfluidic channels using optical tweezers. Lab On a Chip. 9: 2059-62. PMID 19568675 DOI: 10.1039/B900934E  0.044
2007 Lim MJ, Alexander N, Benedict JW, Chattopadhyay S, Shemilt SJ, Guérin CJ, Cooper JD, Pearce DA. IgG entry and deposition are components of the neuroimmune response in Batten disease. Neurobiology of Disease. 25: 239-51. PMID 17070688 DOI: 10.1016/j.nbd.2006.09.005  0.044
2006 Xu C, van Zalinge H, Pearson JL, Glidle A, Cooper JM, Cumming DR, Haiss W, Yao J, Schiffrin DJ, Proupín-Pérez M, Cosstick R, Nichols RJ. A combined top-down bottom-up approach for introducing nanoparticle networks into nanoelectrode gaps. Nanotechnology. 17: 3333-9. PMID 19661573 DOI: 10.1088/0957-4484/17/14/001  0.044
2017 Paterson DJ, Tassieri M, Reboud J, Wilson R, Cooper JM. Lipid topology and electrostatic interactions underpin lytic activity of linear cationic antimicrobial peptides in membranes. Proceedings of the National Academy of Sciences of the United States of America. PMID 28931578 DOI: 10.1073/pnas.1704489114  0.044
2004 Orton KC, Ling J, Waskiewicz AJ, Cooper JA, Merrick WC, Korneeva NL, Rhoads RE, Sonenberg N, Traugh JA. Phosphorylation of Mnk1 by caspase-activated Pak2/gamma-PAK inhibits phosphorylation and interaction of eIF4G with Mnk. The Journal of Biological Chemistry. 279: 38649-57. PMID 15234964 DOI: 10.1074/Jbc.M407337200  0.044
2008 Cooper JA, Qian H. A mechanism for SRC kinase-dependent signaling by noncatalytic receptors. Biochemistry. 47: 5681-8. PMID 18444664 DOI: 10.1021/Bi8003044  0.043
2020 Schneck NA, Ivleva VB, Cai CX, Cooper JW, Lei QP. Characterization of the furin cleavage motif for HIV-1 trimeric envelope glycoprotein by intact LC-MS analysis. The Analyst. PMID 31932825 DOI: 10.1039/c9an02098e  0.043
2009 Teckchandani A, Toida N, Goodchild J, Henderson C, Watts J, Wollscheid B, Cooper JA. Quantitative proteomics identifies a Dab2/integrin module regulating cell migration. The Journal of Cell Biology. 186: 99-111. PMID 19581412 DOI: 10.1083/jcb.200812160  0.043
2016 Lewis J, Breeze CE, Charlesworth J, Maclaren OJ, Cooper J. Where next for the reproducibility agenda in computational biology? Bmc Systems Biology. 10: 52. PMID 27422148 DOI: 10.1186/s12918-016-0288-x  0.043
2004 Ackerley S, Grierson AJ, Banner S, Perkinton MS, Brownlees J, Byers HL, Ward M, Thornhill P, Hussain K, Waby JS, Anderton BH, Cooper JD, Dingwall C, Leigh PN, Shaw CE, et al. p38alpha stress-activated protein kinase phosphorylates neurofilaments and is associated with neurofilament pathology in amyotrophic lateral sclerosis. Molecular and Cellular Neurosciences. 26: 354-64. PMID 15207859 DOI: 10.1016/J.Mcn.2004.02.009  0.043
2013 Nakayama M, Nakayama A, van Lessen M, Yamamoto H, Hoffmann S, Drexler HC, Itoh N, Hirose T, Breier G, Vestweber D, Cooper JA, Ohno S, Kaibuchi K, Adams RH. Spatial regulation of VEGF receptor endocytosis in angiogenesis. Nature Cell Biology. 15: 249-60. PMID 23354168 DOI: 10.1038/Ncb2679  0.043
2023 Kumar S, Stainer A, Dubrulle J, Simpkins C, Cooper JA. Cas phosphorylation regulates focal adhesion assembly. Elife. 12. PMID 37489578 DOI: 10.7554/eLife.90234  0.043
2013 Mole SE, Williams RE, Cooper JD. Special issue: molecular basis of the NCLs. Biochimica Et Biophysica Acta. 1832: 1793-4. PMID 23727410 DOI: 10.1016/J.Bbadis.2013.05.025  0.042
2019 Le LQ, Cooper JM, Patel AJ, Chen Z, Liao CP, Chen K, Wang Y, Mo J. Overcoming BET inhibitor resistance in malignant peripheral nerve sheath tumors. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 30796033 DOI: 10.1158/1078-0432.Ccr-18-2437  0.042
2022 Bigouette JP, Owen EC, Lantz BBA, Hoellrich RG, Wright RW, Huston LJ, Haas AK, Allen CR, Cooper DE, DeBerardino TM, Dunn WR, Spindler KP, Stuart MJ, Albright JP, Amendola AN, ... ... Cooper JM, et al. Returning to Activity After Anterior Cruciate Ligament Revision Surgery: An Analysis of the Multicenter Anterior Cruciate Ligament Revision Study (MARS) Cohort at 2 Years Postoperative. The American Journal of Sports Medicine. 50: 1788-1797. PMID 35648628 DOI: 10.1177/03635465221094621  0.042
2019 Bigouette JP, Owen EC, Lantz BBA, Hoellrich RG, Huston LJ, Haas AK, Allen CR, Anderson AF, Cooper DE, DeBerardino TM, Dunn WR, Mann B, Spindler KP, Stuart MJ, ... ... Cooper JM, et al. Relationship Between Sports Participation After Revision Anterior Cruciate Ligament Reconstruction and 2-Year Patient-Reported Outcome Measures. The American Journal of Sports Medicine. 363546519856348. PMID 31225999 DOI: 10.1177/0363546519856348  0.042
2012 Martino C, Kim SH, Horsfall L, Abbaspourrad A, Rosser SJ, Cooper J, Weitz DA. Protein expression, aggregation, and triggered release from polymersomes as artificial cell-like structures. Angewandte Chemie (International Ed. in English). 51: 6416-20. PMID 22644870 DOI: 10.1002/Anie.201201443  0.042
2006 Bates AD, Callen BP, Cooper JM, Cosstick R, Geary C, Glidle A, Jaeger L, Pearson JL, Proupín-Pérez M, Xu C, Cumming DR. Construction and characterization of a gold nanoparticle wire assembled using Mg2+-dependent RNA-RNA interactions. Nano Letters. 6: 445-8. PMID 16522039 DOI: 10.1021/Nl052316G  0.042
2020 Yang GJ, Yang Y, Shaddeau A, Cai CX, Li Y, Gulla K, Zhang Y, Ou L, Cooper JW, Lei QP. A unique algorithm for the determination of peptide-carrier protein conjugation ratio by amino acid analysis using intrinsic internal standard. Vaccine. PMID 32448620 DOI: 10.1016/j.vaccine.2020.04.080  0.041
2011 Jossin Y, Cooper JA. Reelin, Rap1 and N-cadherin orient the migration of multipolar neurons in the developing neocortex. Nature Neuroscience. 14: 697-703. PMID 21516100 DOI: 10.1038/nn.2816  0.041
2010 Heron SR, Wilson R, Shaffer SA, Goodlett DR, Cooper JM. Surface acoustic wave nebulization of peptides as a microfluidic interface for mass spectrometry. Analytical Chemistry. 82: 3985-9. PMID 20364823 DOI: 10.1021/Ac100372C  0.041
2015 Guo J, Erskine PT, Coker AR, Wood SP, Cooper JB. Structure of a Kunitz-type potato cathepsin D inhibitor. Journal of Structural Biology. PMID 26542926 DOI: 10.1016/j.jsb.2015.10.020  0.041
2019 Shaddeau AW, Schneck NA, Li Y, Ivleva VB, Arnold FJ, Cooper JW, Lei QP. Development of a New Tandem Ion Exchange and Size Exclusion Chromatography Method To Monitor Vaccine Particle Titer in Cell Culture Media. Analytical Chemistry. PMID 31034206 DOI: 10.1021/acs.analchem.9b00095  0.041
2012 Curran A, Lee MP, Padgett MJ, Cooper JM, Di Leonardo R. Partial synchronization of stochastic oscillators through hydrodynamic coupling. Physical Review Letters. 108: 240601. PMID 23004250 DOI: 10.1103/PhysRevLett.108.240601  0.041
2005 Xu M, Arnaud L, Cooper JA. Both the phosphoinositide and receptor binding activities of Dab1 are required for Reelin-stimulated Dab1 tyrosine phosphorylation. Brain Research. Molecular Brain Research. 139: 300-5. PMID 16046028 DOI: 10.1016/j.molbrainres.2005.06.001  0.04
2021 Steenkiste EM, Berndt JD, Pilling C, Simpkins C, Cooper JA. A Cas-BCAR3 co-regulatory circuit controls lamellipodia dynamics. Elife. 10. PMID 34169835 DOI: 10.7554/eLife.67078  0.04
2009 Jain N, Nguyen H, Friedline RH, Malhotra N, Brehm M, Koyanagi M, Bix M, Cooper JA, Chambers CA, Kang J. Cutting edge: Dab2 is a FOXP3 target gene required for regulatory T cell function. Journal of Immunology (Baltimore, Md. : 1950). 183: 4192-6. PMID 19767570 DOI: 10.4049/jimmunol.0902041  0.04
2012 Martino C, Horsfall L, Chen Y, Chanasakulniyom M, Paterson D, Brunet A, Rosser S, Yuan YJ, Cooper JM. Cytoskeletal protein expression and its association within the hydrophobic membrane of artificial cell models. Chembiochem : a European Journal of Chemical Biology. 13: 792-5. PMID 22411693 DOI: 10.1002/cbic.201200038  0.04
2012 Vernon AC, Natesan S, Crum WR, Cooper JD, Modo M, Williams SC, Kapur S. Contrasting effects of haloperidol and lithium on rodent brain structure: a magnetic resonance imaging study with postmortem confirmation. Biological Psychiatry. 71: 855-63. PMID 22244831 DOI: 10.1016/J.Biopsych.2011.12.004  0.04
2015 Tveen-Jensen K, Gesellchen F, Wilson R, Spickett CM, Cooper JM, Pitt AR. Interfacing low-energy SAW nebulization with Liquid Chromatography-Mass Spectrometry for the analysis of biological samples. Scientific Reports. 5: 9736. PMID 25978651 DOI: 10.1038/srep09736  0.04
2010 Hannigan A, Smith P, Kalna G, Lo Nigro C, Orange C, O'Brien DI, Shah R, Syed N, Spender LC, Herrera B, Thurlow JK, Lattanzio L, Monteverde M, Maurer ME, Buffa FM, ... ... Cooper JA, et al. Epigenetic downregulation of human disabled homolog 2 switches TGF-beta from a tumor suppressor to a tumor promoter. The Journal of Clinical Investigation. 120: 2842-57. PMID 20592473 DOI: 10.1172/JCI36125  0.039
2020 Brophy RH, Wright RW, Huston LJ, Haas AK, Nwosu SK, Allen CR, Anderson AF, Cooper DE, DeBerardino TM, Dunn WR, Lantz BBA, Mann B, Spindler KP, Stuart MJ, ... ... Cooper JM, et al. Rate of Infection Following Revision Anterior Cruciate Ligament Reconstruction and associated patient- and surgeon- dependent risk factors: Retrospective results from MOON and MARS data collected from 2002 to 2011. Journal of Orthopaedic Research : Official Publication of the Orthopaedic Research Society. PMID 33002248 DOI: 10.1002/jor.24871  0.039
2018 Demcenko A, Mazilu M, Wilson R, Volker AWF, Cooper JM. Hyperelastic Tuning of One-Dimensional Phononic Band Gaps Using Directional Stress. Ieee Transactions On Ultrasonics, Ferroelectrics, and Frequency Control. 65: 1056-1061. PMID 29856723 DOI: 10.1109/TUFFC.2018.2821440  0.039
2019 Papaioannou D, Petri A, Dovey OM, Terreri S, Wang E, Collins FA, Woodward LA, Walker AE, Nicolet D, Pepe F, Kumchala P, Bill M, Walker CJ, Karunasiri M, Mrózek K, ... ... Cooper JL, et al. The long non-coding RNA HOXB-AS3 regulates ribosomal RNA transcription in NPM1-mutated acute myeloid leukemia. Nature Communications. 10: 5351. PMID 31767858 DOI: 10.1038/S41467-019-13259-2  0.039
2006 Taranow WS, Moutsatson MJ, Cooper JM. Contemporary approaches to stage II and III hallux rigidus: the role of metallic hemiarthroplasty of the proximal phalanx. Foot and Ankle Clinics. 10: 713-28, ix-x. PMID 16297829 DOI: 10.1016/j.fcl.2005.06.011  0.039
2007 Feng L, Allen NS, Simo S, Cooper JA. Cullin 5 regulates Dab1 protein levels and neuron positioning during cortical development. Genes & Development. 21: 2717-30. PMID 17974915 DOI: 10.1101/gad.1604207  0.039
2017 Flynn GE, Withers JM, Macias G, Sperling JR, Henry SL, Cooper JM, Burley GA, Clark AW. Reversible DNA micro-patterning using the fluorous effect. Chemical Communications (Cambridge, England). PMID 28243661 DOI: 10.1039/c7cc00288b  0.039
2015 Dent MR, López-Duarte I, Dickson CJ, Geoghegan ND, Cooper JM, Gould IR, Krams R, Bull JA, Brooks NJ, Kuimova MK. Imaging phase separation in model lipid membranes through the use of BODIPY based molecular rotors. Physical Chemistry Chemical Physics : Pccp. 17: 18393-402. PMID 26104504 DOI: 10.1039/c5cp01937k  0.038
2004 Chibazakura T, McGrew SG, Cooper JA, Yoshikawa H, Roberts JM. Regulation of cyclin-dependent kinase activity during mitotic exit and maintenance of genome stability by p21, p27, and p107. Proceedings of the National Academy of Sciences of the United States of America. 101: 4465-70. PMID 15070741 DOI: 10.1073/pnas.0400655101  0.038
2005 Brown MC, Cary LA, Jamieson JS, Cooper JA, Turner CE. Src and FAK kinases cooperate to phosphorylate paxillin kinase linker, stimulate its focal adhesion localization, and regulate cell spreading and protrusiveness. Molecular Biology of the Cell. 16: 4316-28. PMID 16000375 DOI: 10.1091/Mbc.E05-02-0131  0.038
2004 Herrick TM, Cooper JA. High affinity binding of Dab1 to Reelin receptors promotes normal positioning of upper layer cortical plate neurons. Brain Research. Molecular Brain Research. 126: 121-8. PMID 15249135 DOI: 10.1016/j.molbrainres.2004.03.022  0.037
2021 Adjogatse E, Bennett J, Guo J, Erskine PT, Wood SP, Wren BW, Cooper JB. The X-ray structure of L-threonine dehydrogenase from the common hospital pathogen Clostridium difficile. Acta Crystallographica. Section F, Structural Biology Communications. 77: 269-274. PMID 34341193 DOI: 10.1107/S2053230X21007135  0.037
2005 Maurer ME, Cooper JA. Endocytosis of megalin by visceral endoderm cells requires the Dab2 adaptor protein. Journal of Cell Science. 118: 5345-55. PMID 16263760 DOI: 10.1242/jcs.02650  0.037
2014 Cooper J, Lee L. Editorial--probe and chip approaches to cell analysis. The Analyst. 139: 3205. PMID 24855659 DOI: 10.1039/c4an90044h  0.036
2019 Yang G, Schneck NA, Barefoot N, Yang Y, Gollapudi D, Arnold FJ, Cooper JW, Lei QP. Titer measurement of HIV-1 envelope trimeric glycoprotein in cell culture media by a new tandem ion exchange and size exclusion chromatography (IEC-SEC) method. Vaccine. PMID 31060952 DOI: 10.1016/j.vaccine.2019.04.089  0.036
2006 Kamikura DM, Cooper JA. Clathrin interaction and subcellular localization of Ce-DAB-1, an adaptor for protein secretion in Caenorhabditis elegans. Traffic (Copenhagen, Denmark). 7: 324-36. PMID 16497226 DOI: 10.1111/j.1600-0854.2006.00386.x  0.036
2009 Bowden SA, Wilson R, Parnell J, Cooper JM. Determination of the asphaltene and carboxylic acid content of a heavy oil using a microfluidic device. Lab On a Chip. 9: 828-32. PMID 19255665 DOI: 10.1039/B814495H  0.036
2003 Mukherjee A, Arnaud L, Cooper JA. Lipid-dependent recruitment of neuronal Src to lipid rafts in the brain. The Journal of Biological Chemistry. 278: 40806-14. PMID 12912979 DOI: 10.1074/jbc.M306440200  0.035
2021 Cooper J, Xu Q, Zhou L, Pavlovic M, Ojeda V, Moulick K, de Stanchina E, Poirier JT, Zauderer M, Rudin CM, Karajannis MA, Hanemann CO, Giancotti FG. Correction: Combined Inhibition of NEDD8-activating Enzyme and mTOR Suppresses NF2 Loss-driven Tumorigenesis. Molecular Cancer Therapeutics. 20: 450. PMID 33547247 DOI: 10.1158/1535-7163.MCT-20-1027  0.035
2018 Demčenko A, Wilson R, Cooper JM, Mazilu M, Volker AWF. Ultrasonic waves in uniaxially stressed multilayered and one-dimensional phononic structures: Guided and Floquet wave analysis. The Journal of the Acoustical Society of America. 144: 81. PMID 30075637 DOI: 10.1121/1.5044528  0.035
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