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Susan E Abbatiello - Publications

Affiliations: 
Northeastern University, The Barnett Institute 
Area:
Mass Spectrometry, Proteomics, LC-MS
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26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Onishi T, Nonaka M, Maruno T, Yamaguchi Y, Fukuhara M, Torisu T, Maeda M, Abbatiello S, Haris A, Richardson K, Giles K, Preece S, Yamano-Adachi N, Omasa T, Uchiyama S. Enhancement of recombinant adeno-associated virus activity by improved stoichiometry and homogeneity of capsid protein assembly. Molecular Therapy. Methods & Clinical Development. 31: 101142. PMID 38027055 DOI: 10.1016/j.omtm.2023.101142  0.668
2022 Yang Z, Arja RD, Zhu T, Sarkis GA, Patterson RL, Romo P, Rathore DS, Moghieb A, Abbatiello S, Robertson CS, Haskins WE, Kobeissy F, Wang KKW. Characterization of Calpain and Caspase-6-Generated Glial Fibrillary Acidic Protein Breakdown Products Following Traumatic Brain Injury and Astroglial Cell Injury. International Journal of Molecular Sciences. 23. PMID 36012232 DOI: 10.3390/ijms23168960  0.679
2022 Melani RD, Gerbasi VR, Anderson LC, Sikora JW, Toby TK, Hutton JE, Butcher DS, Negrão F, Seckler HS, Srzentić K, Fornelli L, Camarillo JM, LeDuc RD, Cesnik AJ, Lundberg E, ... ... Abbatiello SE, et al. The Blood Proteoform Atlas: A reference map of proteoforms in human hematopoietic cells. Science (New York, N.Y.). 375: 411-418. PMID 35084980 DOI: 10.1126/science.aaz5284  0.7
2021 Gerbasi VR, Melani RD, Abbatiello SE, Belford MW, Huguet R, McGee JP, Dayhoff D, Thomas PM, Kelleher NL. Deeper Protein Identification Using Field Asymmetric Ion Mobility Spectrometry in Top-Down Proteomics. Analytical Chemistry. PMID 33844503 DOI: 10.1021/acs.analchem.1c00402  0.753
2020 Greguš M, Kostas JC, Ray S, Abbatiello SE, Ivanov AR. Improved Sensitivity of Ultralow Flow LC-MS-Based Proteomic Profiling of Limited Samples Using Monolithic Capillary Columns and FAIMS Technology. Analytical Chemistry. PMID 33054160 DOI: 10.1021/acs.analchem.0c03262  0.752
2020 Addona T, Abbatiello S, Carr SA. From Skepticism to Embrace: The Role of Targeted Mass Spectrometry in Validating Proteomics. Clinical Chemistry. 66: 973-974. PMID 32628755 DOI: 10.1093/clinchem/hvaa111  0.735
2020 Schweppe DK, Prasad S, Belford MW, Navarrete-Perea J, Bailey DJ, Huguet R, Jedrychowski MP, Rad R, McAlister G, Abbatiello SE, Wouters ER, Zabrouskov V, Dunyach JJ, Paulo JA, Gygi SP. Correction to Characterization and Optimization of Multiplexed Quantitative Analyses Using High-Field Asymmetric-Waveform Ion Mobility Mass Spectrometry. Analytical Chemistry. PMID 32134636 DOI: 10.1021/acs.analchem.0c00888  0.714
2020 Griffiths RL, Hughes J, Abbatiello SE, Belford MW, Styles IB, Cooper HJ. Comprehensive LESA mass spectrometry imaging of intact proteins by integration of cylindrical FAIMS. Analytical Chemistry. PMID 31967787 DOI: 10.1021/acs.analchem.9b05124  0.732
2019 Schweppe DK, Prasad S, Belford MW, Navarrete-Perea J, Bailey D, Huguet R, Jedrychowski MP, Rad R, McAlister G, Abbatiello SE, Woulters ER, Zabrouskov V, Dunyach JJ, Paulo JA, Gygi SP. Characterization and optimization of multiplexed quantitative analyses using high-field asymmetric-waveform ion mobility mass spectrometry. Analytical Chemistry. PMID 30672687 DOI: 10.1021/Acs.Analchem.8B05399  0.769
2018 Hebert AS, Prasad S, Belford MW, Bailey DJ, McAlister GC, Abbatiello SE, Huguet R, Wouters ER, Dunyach JJ, Brademan DR, Westphall MS, Coon JJ. Rapid and Comprehensive Single Shot Proteomics with LC-FAIMS-MS/MS. Analytical Chemistry. PMID 29969236 DOI: 10.1021/Acs.Analchem.8B02233  0.766
2018 Galitzine C, Egertson J, Abbatiello SE, Henderson CM, Pino L, MacCoss MJ, Hoofnagle AN, Vitek O. Nonlinear regression improves accuracy of characterization of multiplexed mass spectrometric assays. Molecular & Cellular Proteomics : McP. PMID 29438992 DOI: 10.1074/Mcp.Ra117.000322  0.728
2017 Dogu E, Mohammad-Taheri S, Abbatiello SE, Bereman MS, MacLean B, Schilling B, Vitek O. MSstatsQC: Longitudinal system suitability monitoring and quality control for targeted proteomic experiments. Molecular & Cellular Proteomics : McP. PMID 28483925 DOI: 10.1074/Mcp.M116.064774  0.743
2017 Abbatiello SE, Ackermann BL, Borchers CH, Bradshaw RA, Carr SA, Chalkley RJ, Choi M, Deutsch EW, Domon B, Hoofnagle AN, Keshishian H, Kuhn E, Liebler DC, MacCoss MJ, MacLean B, et al. New Guidelines for Publication of Manuscripts Describing Development and Application of Targeted Mass Spectrometry Measurements of Peptides and Proteins. Molecular & Cellular Proteomics : McP. PMID 28183812 DOI: 10.1074/Mcp.E117.067801  0.75
2016 Abelin JG, Patel J, Lu X, Feeney CM, Fagbami L, Creech AL, Hu R, Lam D, Davison D, Pino L, Qiao JW, Kuhn E, Officer A, Li J, Abbatiello S, et al. Reduced-representation phosphosignatures measured by quantitative targeted MS capture cellular states and enable large-scale comparison of drug-induced phenotypes. Molecular & Cellular Proteomics : McP. PMID 26912667 DOI: 10.1074/Mcp.M116.058354  0.746
2015 Abbatiello SE, Schilling B, Mani DR, Zimmerman LJ, Hall SC, MacLean B, Albertolle M, Allen S, Burgess M, Cusack MP, Ghosh M, Hedrick V, Held JM, Inerowicz HD, Jackson A, et al. Large-scale inter-laboratory study to develop, analytically validate and apply highly multiplexed, quantitative peptide assays to measure cancer-relevant proteins in plasma. Molecular & Cellular Proteomics : McP. PMID 25693799 DOI: 10.1074/Mcp.M114.047050  0.79
2014 Broudy D, Killeen T, Choi M, Shulman N, Mani DR, Abbatiello SE, Mani D, Ahmad R, Sahu AK, Schilling B, Tamura K, Boss Y, Sharma V, Gibson BW, Carr SA, et al. A framework for installable external tools in Skyline. Bioinformatics (Oxford, England). 30: 2521-3. PMID 24813211 DOI: 10.1093/Bioinformatics/Btu148  0.713
2014 Carr SA, Abbatiello SE, Ackermann BL, Borchers C, Domon B, Deutsch EW, Grant RP, Hoofnagle AN, Hüttenhain R, Koomen JM, Liebler DC, Liu T, MacLean B, Mani DR, Mansfield E, et al. Targeted peptide measurements in biology and medicine: best practices for mass spectrometry-based assay development using a fit-for-purpose approach. Molecular & Cellular Proteomics : McP. 13: 907-17. PMID 24443746 DOI: 10.1074/Mcp.M113.036095  0.776
2014 Kennedy JJ, Abbatiello SE, Kim K, Yan P, Whiteaker JR, Lin C, Kim JS, Zhang Y, Wang X, Ivey RG, Zhao L, Min H, Lee Y, Yu MH, Yang EG, et al. Demonstrating the feasibility of large-scale development of standardized assays to quantify human proteins. Nature Methods. 11: 149-55. PMID 24317253 DOI: 10.1038/Nmeth.2763  0.745
2013 Abbatiello SE, Mani DR, Schilling B, Maclean B, Zimmerman LJ, Feng X, Cusack MP, Sedransk N, Hall SC, Addona T, Allen S, Dodder NG, Ghosh M, Held JM, Hedrick V, et al. Design, implementation and multisite evaluation of a system suitability protocol for the quantitative assessment of instrument performance in liquid chromatography-multiple reaction monitoring-MS (LC-MRM-MS). Molecular & Cellular Proteomics : McP. 12: 2623-39. PMID 23689285 DOI: 10.1074/Mcp.M112.027078  0.77
2012 Mani DR, Abbatiello SE, Carr SA. Statistical characterization of multiple-reaction monitoring mass spectrometry (MRM-MS) assays for quantitative proteomics. Bmc Bioinformatics. 13: S9. PMID 23176545  0.785
2011 Whiteaker JR, Zhao L, Abbatiello SE, Burgess M, Kuhn E, Lin C, Pope ME, Razavi M, Anderson NL, Pearson TW, Carr SA, Paulovich AG. Evaluation of large scale quantitative proteomic assay development using peptide affinity-based mass spectrometry. Molecular & Cellular Proteomics : McP. 10: M110.005645. PMID 21245105 DOI: 10.1074/Mcp.M110.005645  0.761
2010 MacLean B, Tomazela DM, Abbatiello SE, Zhang S, Whiteaker JR, Paulovich AG, Carr SA, MacCoss MJ. Effect of collision energy optimization on the measurement of peptides by selected reaction monitoring (SRM) mass spectrometry Analytical Chemistry. 82: 10116-10124. PMID 21090646 DOI: 10.1021/Ac102179J  0.74
2010 Abbatiello SE, Mani DR, Keshishian H, Carr SA. Automated detection of inaccurate and imprecise transitions in peptide quantification by multiple reaction monitoring mass spectrometry. Clinical Chemistry. 56: 291-305. PMID 20022980 DOI: 10.1373/clinchem.2009.138420  0.778
2009 Addona TA, Abbatiello SE, Schilling B, Skates SJ, Mani DR, Bunk DM, Spiegelman CH, Zimmerman LJ, Ham AJ, Keshishian H, Hall SC, Allen S, Blackman RK, Borchers CH, Buck C, et al. Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma. Nature Biotechnology. 27: 633-41. PMID 19561596 DOI: 10.1038/Nbt.1546  0.773
2008 Abbatiello SE, Pan YX, Zhou M, Wayne AS, Veenstra TD, Hunger SP, Kilberg MS, Eyler JR, Richards NG, Conrads TP. Mass spectrometric quantification of asparagine synthetase in circulating leukemia cells from acute lymphoblastic leukemia patients. Journal of Proteomics. 71: 61-70. PMID 18541474 DOI: 10.1016/J.Jprot.2007.11.009  0.78
2005 Ciustea M, Gutierrez JA, Abbatiello SE, Eyler JR, Richards NG. Efficient expression, purification, and characterization of C-terminally tagged, recombinant human asparagine synthetase. Archives of Biochemistry and Biophysics. 440: 18-27. PMID 16023613 DOI: 10.1016/J.Abb.2005.05.023  0.735
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