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Jiefu Li - Publications

Affiliations: 
2013-2014 Physiology University of California, San Francisco, San Francisco, CA 
 2014-2020 Biology Stanford University, Palo Alto, CA 
 2020-2022 Institute for Immunity, Transplantation, and Infection Stanford University, Palo Alto, CA 
Area:
neurobiology, immunology
Website:
https://lilab.science
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19/37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Shuster SA, Li J, Chon U, Sinantha-Hu MC, Luginbuhl DJ, Udeshi ND, Carey DK, Takeo YH, Xie Q, Xu C, Mani DR, Han S, Ting AY, Carr SA, Luo L. In situ cell-type-specific cell-surface proteomic profiling in mice. Neuron. PMID 36220098 DOI: 10.1016/j.neuron.2022.09.025  0.744
2022 Xie Q, Li J, Li H, Udeshi ND, Svinkina T, Orlin D, Kohani S, Guajardo R, Mani DR, Xu C, Li T, Han S, Wei W, Shuster SA, Luginbuhl DJ, et al. Transcription factor Acj6 controls dendrite targeting via a combinatorial cell-surface code. Neuron. PMID 35613619 DOI: 10.1016/j.neuron.2022.04.026  0.789
2022 Li H, Janssens J, De Waegeneer M, Kolluru SS, Davie K, Gardeux V, Saelens W, David FPA, Brbić M, Spanier K, Leskovec J, McLaughlin CN, Xie Q, Jones RC, Brueckner K, ... Li J, ... Li JSS, et al. Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly. Science (New York, N.Y.). 375: eabk2432. PMID 35239393 DOI: 10.1126/science.abk2432  0.691
2021 McLaughlin CN, Brbić M, Xie Q, Li T, Horns F, Kolluru SS, Kebschull JM, Vacek D, Xie A, Li J, Jones RC, Leskovec J, Quake SR, Luo L, Li H. Single-cell transcriptomes of developing and adult olfactory receptor neurons in . Elife. 10. PMID 33555999 DOI: 10.7554/eLife.63856  0.792
2021 Xie Q, Brbic M, Horns F, Kolluru SS, Jones RC, Li J, Reddy AR, Xie A, Kohani S, Li Z, McLaughlin CN, Li T, Xu C, Vacek D, Luginbuhl DJ, et al. Temporal evolution of single-cell transcriptomes of olfactory projection neurons. Elife. 10. PMID 33427646 DOI: 10.7554/eLife.63450  0.785
2020 Li J, Luo L. Nurturing Undergraduate Researchers in Biomedical Sciences. Cell. 182: 1-4. PMID 32649872 DOI: 10.1016/J.Cell.2020.05.008  0.352
2020 Li H, Li T, Horns F, Li J, Xie Q, Xu C, Wu B, Kebschull JM, McLaughlin CN, Kolluru SS, Jones RC, Vacek D, Xie A, Luginbuhl DJ, Quake SR, et al. Single-Cell Transcriptomes Reveal Diverse Regulatory Strategies for Olfactory Receptor Expression and Axon Targeting. Current Biology : Cb. PMID 32059767 DOI: 10.1016/J.Cub.2020.01.049  0.739
2020 Li J, Han S, Li H, Udeshi ND, Svinkina T, Mani DR, Xu C, Guajardo R, Xie Q, Li T, Luginbuhl DJ, Wu B, McLaughlin CN, Xie A, Kaewsapsak P, et al. Cell-Surface Proteomic Profiling in the Fly Brain Uncovers Wiring Regulators. Cell. PMID 31955847 DOI: 10.1016/J.Cell.2019.12.029  0.787
2019 Xie Q, Wu B, Li J, Xu C, Li H, Luginbuhl DJ, Wang X, Ward A, Luo L. Transsynaptic Fish-lips signaling prevents misconnections between nonsynaptic partner olfactory neurons. Proceedings of the National Academy of Sciences of the United States of America. PMID 31341080 DOI: 10.1073/Pnas.1905832116  0.795
2019 Guajardo R, Luginbuhl DJ, Han S, Luo L, Li J. Functional divergence of Plexin B structural motifs in distinct steps of olfactory circuit assembly. Elife. 8. PMID 31225795 DOI: 10.7554/Elife.48594  0.529
2018 Li J, Guajardo R, Xu C, Wu B, Li H, Li T, Luginbuhl DJ, Xie X, Luo L. Stepwise wiring of the Drosophila olfactory map requires specific Plexin B levels. Elife. 7. PMID 30136927 DOI: 10.7554/Elife.39088  0.777
2018 Li H, Shuster SA, Li J, Luo L. Linking neuronal lineage and wiring specificity. Neural Development. 13: 5. PMID 29653548 DOI: 10.1186/S13064-018-0102-0  0.6
2017 Li H, Horns F, Wu B, Xie Q, Li J, Li T, Luginbuhl DJ, Quake SR, Luo L. Classifying Drosophila Olfactory Projection Neuron Subtypes by Single-Cell RNA Sequencing. Cell. 171: 1206-1220.e22. PMID 29149607 DOI: 10.1016/J.Cell.2017.10.019  0.793
2017 Li J, Luo L. Neurobiology: A bitter-sweet symphony. Nature. PMID 28792928 DOI: 10.1038/Nature23537  0.647
2017 Wu B, Li J, Chou YH, Luginbuhl D, Luo L. Fibroblast growth factor signaling instructs ensheathing glia wrapping of Drosophila olfactory glomeruli. Proceedings of the National Academy of Sciences of the United States of America. PMID 28674010 DOI: 10.1073/Pnas.1706533114  0.664
2016 Li J, Zhang W, Guo Z, Wu S, Jan LY, Jan YN. A Defensive Kicking Behavior in Response to Mechanical Stimuli Mediated by Drosophila Wing Margin Bristles. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 36: 11275-11282. PMID 27807168 DOI: 10.1523/Jneurosci.1416-16.2016  0.612
2016 Guo Y, Wang Y, Zhang W, Meltzer S, Zanini D, Yu Y, Li J, Cheng T, Guo Z, Wang Q, Jacobs JS, Sharma Y, Eberl DF, Göpfert MC, Jan LY, et al. Transmembrane channel-like (tmc) gene regulates Drosophila larval locomotion. Proceedings of the National Academy of Sciences of the United States of America. PMID 27298354 DOI: 10.1073/Pnas.1606537113  0.683
2015 Zhang W, Cheng LE, Kittelmann M, Li J, Petkovic M, Cheng T, Jin P, Guo Z, Göpfert MC, Jan LY, Jan YN. Ankyrin Repeats Convey Force to Gate the NOMPC Mechanotransduction Channel. Cell. 162: 1391-403. PMID 26359990 DOI: 10.1016/J.Cell.2015.08.024  0.564
2015 Gao XJ, Riabinina O, Li J, Potter CJ, Clandinin TR, Luo L. A transcriptional reporter of intracellular Ca(2+) in Drosophila. Nature Neuroscience. 18: 917-25. PMID 25961791 DOI: 10.1038/Nn.4016  0.678
Low-probability matches (unlikely to be authored by this person)
2017 Han S, Li J, Ting AY. Proximity labeling: spatially resolved proteomic mapping for neurobiology. Current Opinion in Neurobiology. 50: 17-23. PMID 29125959 DOI: 10.1016/J.Conb.2017.10.015  0.229
2023 Robles Luna G, Li J, Wang X, Liao L, Lee JY. Targeting of plasmodesmal proteins requires unconventional signals. The Plant Cell. PMID 37225403 DOI: 10.1093/plcell/koad152  0.202
2017 Wei HH, Liu Y, Wang Y, Lu Q, Yang X, Li J, Wang Z. Engineering Artificial Factors to Specifically Manipulate Alternative Splicing in Human Cells. Journal of Visualized Experiments : Jove. PMID 28518098 DOI: 10.3791/54967  0.167
2015 Ma Y, Nie H, Chen H, Li J, Hong Y, Wang B, Wang C, Zhang J, Cao W, Zhang M, Xu Y, Ding X, Yin SK, Qu X, Ying W. NAD⁺/NADH metabolism and NAD⁺-dependent enzymes in cell death and ischemic brain injury: current advances and therapeutic implications. Current Medicinal Chemistry. 22: 1239-47. PMID 25666794 DOI: 10.2174/0929867322666150209154420  0.144
2014 Li S, Hsu DD, Li B, Luo X, Alderson N, Qiao L, Ma L, Zhu HH, He Z, Suino-Powell K, Ji K, Li J, Shao J, Xu HE, Li T, et al. Cytoplasmic tyrosine phosphatase Shp2 coordinates hepatic regulation of bile acid and FGF15/19 signaling to repress bile acid synthesis. Cell Metabolism. 20: 320-32. PMID 24981838 DOI: 10.1016/J.Cmet.2014.05.020  0.137
2022 Li J, Zaslavsky M, Su Y, Guo J, Sikora MJ, van Unen V, Christophersen A, Chiou SH, Chen L, Li J, Ji X, Wilhelmy J, McSween AM, Palanski BA, Mallajosyula VVA, et al. KIRCD8 T cells suppress pathogenic T cells and are active in autoimmune diseases and COVID-19. Science (New York, N.Y.). eabi9591. PMID 35258337 DOI: 10.1126/science.abi9591  0.134
2021 Li J, Zaslavsky M, Su Y, Sikora MJ, van Unen V, Christophersen A, Chiou SH, Chen L, Li J, Ji X, Wilhelmy J, McSween AM, Palanski BA, Aditya Mallajosyula VV, Dhondalay GKR, et al. Human KIR CD8 T cells target pathogenic T cells in Celiac disease and are active in autoimmune diseases and COVID-19. Biorxiv : the Preprint Server For Biology. PMID 34981055 DOI: 10.1101/2021.12.23.473930  0.126
2017 Zou B, Li J, Zhou Q, Quan ZX. MIPE: A metagenome-based community structure explorer and SSU primer evaluation tool. Plos One. 12: e0174609. PMID 28350876 DOI: 10.1371/journal.pone.0174609  0.107
2023 Gao F, Mallajoysula V, Arunachalam PS, van der Ploeg K, Manohar M, Röltgen K, Yang F, Wirz O, Hoh R, Haraguchi E, Lee JY, Willis R, Ramachandiran V, Li J, Kathuria KR, et al. Spheromers reveal robust T cell responses to the Pfizer/BioNTech vaccine and attenuated peripheral CD8 T cell responses post SARS-CoV-2 infection. Immunity. PMID 36996809 DOI: 10.1016/j.immuni.2023.03.005  0.105
2022 Ling Y, Cao R, Qian J, Li J, Zhou H, Yuan L, Wang Z, Ma L, Zheng G, Zhao G, Wang Z, Zhang G, Li Y. An interactive viral genome evolution network analysis system enabling rapid large-scale molecular tracing of SARS-CoV-2. Science Bulletin. PMID 35036033 DOI: 10.1016/j.scib.2022.01.001  0.104
2021 Li J, Lee JY, Liao L. A new algorithm to train hidden Markov models for biological sequences with partial labels. Bmc Bioinformatics. 22: 162. PMID 33771095 DOI: 10.1186/s12859-021-04080-0  0.08
2023 Li J, Sawhney A, Lee JY, Liao L. Improving Inter-Helix Contact Prediction With Local 2D Topological Information. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 37155404 DOI: 10.1109/TCBB.2023.3274361  0.078
2023 Sawhney A, Li J, Liao L. Improving AlphaFold predicted contacts inalpha-helical transmembrane proteins structuresusing structural features. Research Square. PMID 37961476 DOI: 10.21203/rs.3.rs-3475769/v1  0.077
2017 Dufault-Thompson K, Jian H, Cheng R, Li J, Wang F, Zhang Y. A Genome-Scale Model of Shewanella piezotolerans Simulates Mechanisms of Metabolic Diversity and Energy Conservation. Msystems. 2. PMID 28382331 DOI: 10.1128/mSystems.00165-16  0.072
2024 Li J, Wang Z, Fan X, Yao R, Zhang G, Fan R, Wang Z. Rapid multiple protein sequence search by parallel and heterogeneous computation. Bioinformatics (Oxford, England). PMID 38547405 DOI: 10.1093/bioinformatics/btae151  0.065
2017 Sun J, Su C, Zhang X, Li J, Zhang WB, Zhao N, Xu J, Yang S. Responsive complex capsules prepared with polymerization of dopamine, hydrogen-bonding assembly, and catechol dismutation. Journal of Colloid and Interface Science. 513: 470-479. PMID 29175741 DOI: 10.1016/j.jcis.2017.10.021  0.04
2018 Sun J, Li J, Liu D, Ma Y, Yang S. pH-Responsive Janus Film Constructed with Hydrogen-Bonding Assembly and Dopamine Chemistry. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 29715430 DOI: 10.1021/acs.langmuir.7b04339  0.033
2016 Li J, Wang Z, Wen L, Nie J, Yang S, Xu J, Cheng SZD. Highly Elastic Fibers Made from Hydrogen-Bonded Polymer Complex. Acs Macro Letters. 5: 814-818. PMID 35614769 DOI: 10.1021/acsmacrolett.6b00346  0.01
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