KiJung Yoon - Related publications

University of Texas at Austin, Austin, Texas, U.S.A. 
Computational and Theoretical Neuroscience
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Chen Y, Liang D, Bai X, Xu Y, Yang X. Cell Localization and Counting Using Direction Field Map. Ieee Journal of Biomedical and Health Informatics. PMID 34406952 DOI: 10.1109/JBHI.2021.3105545   
2021 van der Leun AM, Hoekstra ME, Reinalda L, Scheele CLGJ, Toebes M, van de Graaff MJ, Chen LYY, Li H, Bercovich A, Lubling Y, David E, Thommen DS, Tanay A, van Rheenen J, Amit I, et al. Single-cell analysis of regions of interest (SCARI) using a photosensitive tag. Nature Chemical Biology. PMID 34504322 DOI: 10.1038/s41589-021-00839-x   
2021 Sun J, Gao L, Wang L, Sun X. Recent advances in single-cell analysis: Encapsulation materials, analysis methods and integrative platform for microfluidic technology. Talanta. 234: 122671. PMID 34364472 DOI: 10.1016/j.talanta.2021.122671   
2021 Hu S, Wang X, Tan Y, Liu J, Zhao H. 'Chain and running' induced by mechanical interactions among cells of different phenotypes in the Bacillus subtilis biofilm. European Biophysics Journal : Ebj. PMID 34308485 DOI: 10.1007/s00249-021-01562-0   
2021 Wang C, Li S, Ademiloye AS, Nithiarasu P. Biomechanics of cells and subcellular components: A comprehensive review of computational models and applications. International Journal For Numerical Methods in Biomedical Engineering. e3520. PMID 34390323 DOI: 10.1002/cnm.3520   
2021 Langseth CM, Gyllborg D, Miller JA, Close JL, Long B, Lein ES, Hilscher MM, Nilsson M. Comprehensive in situ mapping of human cortical transcriptomic cell types. Communications Biology. 4: 998. PMID 34429496 DOI: 10.1038/s42003-021-02517-z   
2021 Wu P, Sawaki S, Hakamada M, Mabuchi M. Effects of actuation of nanoporous gold on cell orientation in a fibroblast sheet. Journal of Materials Science. Materials in Medicine. 32: 103. PMID 34406495 DOI: 10.1007/s10856-021-06584-w   
2021 Wong HS, Germain RN. Mesoscale T cell antigen discrimination emerges from intercellular feedback. Trends in Immunology. PMID 34493455 DOI: 10.1016/   
2021 Merah-Mourah F, Cohen SO, Haziot A. A Two-Stage Flow Cytometry Strategy to Distinguish Single Cells from Doublets in Heterogeneous Cell Mixtures and Improve Cell Cluster Identification: Application to Human Monocyte Subpopulations. Current Protocols. 1: e229. PMID 34416100 DOI: 10.1002/cpz1.229   
2021 Guet-McCreight A, Skinner FK. Deciphering how interneuron specific 3 cells control oriens lacunosum-moleculare cells to contribute to circuit function. Journal of Neurophysiology. PMID 34379493 DOI: 10.1152/jn.00204.2021   
2021 Durand M. Large-scale simulations of biological cell sorting driven by differential adhesion follow diffusion-limited domain coalescence regime. Plos Computational Biology. 17: e1008576. PMID 34398883 DOI: 10.1371/journal.pcbi.1008576   
2021 Metzner C, Hörsch F, Mark C, Czerwinski T, Winterl A, Voskens C, Fabry B. Detecting long-range interactions between migrating cells. Scientific Reports. 11: 15031. PMID 34294808 DOI: 10.1038/s41598-021-94458-0   
2021 Geuenich MJ, Hou J, Lee S, Ayub S, Jackson HW, Campbell KR. Automated assignment of cell identity from single-cell multiplexed imaging and proteomic data. Cell Systems. PMID 34536381 DOI: 10.1016/j.cels.2021.08.012   
2021 Kok L, Masopust D, Schumacher TN. The precursors of CD8 tissue resident memory T cells: from lymphoid organs to infected tissues. Nature Reviews. Immunology. PMID 34480118 DOI: 10.1038/s41577-021-00590-3   
2021 Ginosar G, Aljadeff J, Burak Y, Sompolinsky H, Las L, Ulanovsky N. Locally ordered representation of 3D space in the entorhinal cortex. Nature. PMID 34381211 DOI: 10.1038/s41586-021-03783-x   
2021 Kamperman T, Henke S, Crispim JF, Willemen NGA, Dijkstra PJ, Lee W, Offerhaus HL, Neubauer M, Smink AM, de Vos P, de Haan BJ, Karperien M, Shin SR, Leijten J. Tethering Cells via Enzymatic Oxidative Crosslinking Enables Mechanotransduction in Non-Cell-Adhesive Materials. Advanced Materials (Deerfield Beach, Fla.). e2102660. PMID 34476848 DOI: 10.1002/adma.202102660   
2021 Xie T, St Pierre SR, Olaranont N, Brown LE, Wu M, Sun Y. Condensation tendency and planar isotropic actin gradient induce radial alignment in confined monolayers. Elife. 10. PMID 34542405 DOI: 10.7554/eLife.60381   
2021 Rodriguez-Granrose D, Zurawski J, Heaton W, Tandeski T, Dulatov G, Highsmith AA, Conen M, Clark G, Jones A, Loftus H, LeBaron C, Scull E, Farhang N, Erickson I, Bingham J, et al. Transition from static culture to stirred tank bioreactor for the allogeneic production of therapeutic discogenic cell spheres. Stem Cell Research & Therapy. 12: 455. PMID 34384480 DOI: 10.1186/s13287-021-02525-0   
2021 Christo SN, Evrard M, Park SL, Gandolfo LC, Burn TN, Fonseca R, Newman DM, Alexandre YO, Collins N, Zamudio NM, Souza-Fonseca-Guimaraes F, Pellicci DG, Chisanga D, Shi W, Bartholin L, et al. Discrete tissue microenvironments instruct diversity in resident memory T cell function and plasticity. Nature Immunology. PMID 34426691 DOI: 10.1038/s41590-021-01004-1   
2021 Philip M, Schietinger A. CD8 T cell differentiation and dysfunction in cancer. Nature Reviews. Immunology. PMID 34253904 DOI: 10.1038/s41577-021-00574-3   
2021 Genshaft AS, Ziegler CGK, Tzouanas CN, Mead BE, Jaeger AM, Navia AW, King RP, Mana MD, Huang S, Mitsialis V, Snapper SB, Yilmaz ÖH, Jacks T, Van Humbeck JF, Shalek AK. Live cell tagging tracking and isolation for spatial transcriptomics using photoactivatable cell dyes. Nature Communications. 12: 4995. PMID 34404785 DOI: 10.1038/s41467-021-25279-y   
2021 Nogimori T, Sugawara Y, Higashiguchi M, Murakami H, Akita H, Takahama S, Tanaka S, Yamamoto T. OMIP 078: A 31-parameter panel for comprehensive immunophenotyping of multiple immune cells in human peripheral blood mononuclear cells. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 34355867 DOI: 10.1002/cyto.a.24490   
2021 Osorio D, Kuijjer ML, Cai JJ. rPanglaoDB: an R package to download and merge labeled single-cell RNA-seq data from the PanglaoDB database. Bioinformatics (Oxford, England). PMID 34320637 DOI: 10.1093/bioinformatics/btab549   
2021 Torres M, Dickson AJ. Overexpression of transcription factor BLIMP1/prdm1 leads to growth inhibition and enhanced secretory capacity in Chinese hamster ovary cells. Metabolic Engineering. 67: 237-249. PMID 34265400 DOI: 10.1016/j.ymben.2021.07.004   
2021 Ali A, Canaday LM, Feldman HA, Cevik H, Moran MT, Rajaram S, Lakes N, Tuazon JA, Seelamneni H, Krishnamurthy D, Blass E, Barouch DH, Waggoner SN. Natural killer cell immunosuppressive function requires CXCR3-dependent redistribution within lymphoid tissues. The Journal of Clinical Investigation. PMID 34314390 DOI: 10.1172/JCI146686   
2021 Berent ZT, Wagoner Johnson AJ. Morphological switch is associated with increase in cell-cell contacts, ALP, and confluence above a minimum island area to perimeter ratio. Journal of Biomedical Materials Research. Part A. PMID 34331408 DOI: 10.1002/jbm.a.37274   
2021 Wang S, Perkins NG, Ji F, Chaudhuri R, Guo Z, Sarkar P, Shao S, Li Z, Xue M. Digitonin-facilitated delivery of imaging probes enables single-cell analysis of AKT signalling activities in suspension cells. The Analyst. PMID 34351328 DOI: 10.1039/d1an00751c   
2021 Corselli M, Saksena S, Nakamoto M, Lomas WE, Taylor I, Chattopadhyay PK. Single cell multiomic analysis of T cell exhaustion in vitro. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 34390166 DOI: 10.1002/cyto.a.24496   
2021 Hickey JW, Tan Y, Nolan GP, Goltsev Y. Strategies for Accurate Cell Type Identification in CODEX Multiplexed Imaging Data. Frontiers in Immunology. 12: 727626. PMID 34484237 DOI: 10.3389/fimmu.2021.727626   
2021 Stein CM, Weiskirchen R, Damm F, Strzelecka PM. Single-cell omics: Overview, analysis, and application in biomedical science. Journal of Cellular Biochemistry. PMID 34459502 DOI: 10.1002/jcb.30134   
2021 Verma A, Jena SG, Isakov DR, Aoki K, Toettcher JE, Engelhardt BE. A self-exciting point process to study multicellular spatial signaling patterns. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34362843 DOI: 10.1073/pnas.2026123118   
2021 Kim MS, Monfredi O, Maltseva LA, Lakatta EG, Maltsev VA. β-Adrenergic Stimulation Synchronizes a Broad Spectrum of Action Potential Firing Rates of Cardiac Pacemaker Cells toward a Higher Population Average. Cells. 10. PMID 34440893 DOI: 10.3390/cells10082124   
2021 Prins MMC, van Roest M, Vermeulen JLM, Tjabringa GS, van de Graaf SFJ, Koelink PJ, Wildenberg ME. Applicability of different cell line-derived dendritic cell-like cells in autophagy research. Journal of Immunological Methods. 113106. PMID 34324891 DOI: 10.1016/j.jim.2021.113106   
2021 Karachi A, Dastmalchi F, Nazarian S, Huang J, Sayour EJ, Jin L, Yang C, Mitchell DA, Rahman M. Optimizing T Cell-Based Therapy for Glioblastoma. Frontiers in Immunology. 12: 705580. PMID 34421912 DOI: 10.3389/fimmu.2021.705580   
2021 Charles-Orszag A, Lord SJ, Mullins RD. High-Temperature Live-Cell Imaging of Cytokinesis, Cell Motility, and Cell-Cell Interactions in the Thermoacidophilic Crenarchaeon . Frontiers in Microbiology. 12: 707124. PMID 34447359 DOI: 10.3389/fmicb.2021.707124   
2021 Bai D, Peng J, Yi C. Advances in single-cell multi-omics profiling. Rsc Chemical Biology. 2: 441-449. PMID 34458793 DOI: 10.1039/d0cb00163e   
2021 Brasch ME, Peña AN, Henderson JH. Image-based cell subpopulation identification through automated cell tracking, principal component analysis, and partitioning around medoids clustering. Medical & Biological Engineering & Computing. PMID 34331635 DOI: 10.1007/s11517-021-02418-7   
2021 Bode D, Cull AH, Rubio-Lara JA, Kent DG. Exploiting Single-Cell Tools in Gene and Cell Therapy. Frontiers in Immunology. 12: 702636. PMID 34322133 DOI: 10.3389/fimmu.2021.702636   
2021 Quake SR. The cell as a bag of RNA. Trends in Genetics : Tig. PMID 34462156 DOI: 10.1016/j.tig.2021.08.003   
2021 Jing Y, Cao M, Zhang B, Long X, Wang X. cDC1 Dependent Accumulation of Memory T Cells Is Required for Chronic Autoimmune Inflammation in Murine Testis. Frontiers in Immunology. 12: 651860. PMID 34381443 DOI: 10.3389/fimmu.2021.651860   
2021 Wang X, Chen Y, Li Z, Huang B, Xu L, Lai J, Lu Y, Zha X, Liu B, Lan Y, Li Y. Single-Cell RNA-Seq of T Cells in B-ALL Patients Reveals an Exhausted Subset with Remarkable Heterogeneity. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). e2101447. PMID 34365737 DOI: 10.1002/advs.202101447   
2021 Nguyen VL, Obara H. Investigation of vessel occlusion during cell seeding process. Biomechanics and Modeling in Mechanobiology. PMID 34480225 DOI: 10.1007/s10237-021-01517-6   
2021 Adlung L, Stapor P, Tönsing C, Schmiester L, Schwarzmüller LE, Postawa L, Wang D, Timmer J, Klingmüller U, Hasenauer J, Schilling M. Cell-to-cell variability in JAK2/STAT5 pathway components and cytoplasmic volumes defines survival threshold in erythroid progenitor cells. Cell Reports. 36: 109507. PMID 34380040 DOI: 10.1016/j.celrep.2021.109507   
2021 Olivi L, Berger M, Creyghton RNP, De Franceschi N, Dekker C, Mulder BM, Claassens NJ, Ten Wolde PR, van der Oost J. Towards a synthetic cell cycle. Nature Communications. 12: 4531. PMID 34312383 DOI: 10.1038/s41467-021-24772-8   
2021 Lovett-Racke AE, Yang Y, Liu Y, Gormley M, Kraus E, Graham C, Wray S, Racke MK, Alvarez E, Bass A, Fox E. B cell depletion changes the immune cell profile in multiple sclerosis patients: One-year report. Journal of Neuroimmunology. 359: 577676. PMID 34364105 DOI: 10.1016/j.jneuroim.2021.577676   
2021 Chin DS, Lim CSY, Nordin F, Arifin N, Jun TG. Antibody-dependent cell-mediated cytotoxicity through Natural Killer (NK) cells: unlocking NK cells for future immunotherapy. Current Pharmaceutical Biotechnology. PMID 34414871 DOI: 10.2174/1389201022666210820093608   
2021 Janelle V, Neault M, Lebel MÈ, De Sousa DM, Boulet S, Durrieu L, Carli C, Muzac C, Lemieux S, Labrecque N, Melichar HJ, Mallette FA, Delisle JS. p16 Regulates Cellular Senescence in PD-1-Expressing Human T Cells. Frontiers in Immunology. 12: 698565. PMID 34434190 DOI: 10.3389/fimmu.2021.698565   
2021 Cordero-Espinoza L, Dowbaj AM, Kohler TN, Strauss B, Sarlidou O, Belenguer G, Pacini C, Martins NP, Dobie R, Wilson-Kanamori JR, Butler R, Prior N, Serup P, Jug F, Henderson NC, et al. Dynamic cell contacts between periportal mesenchyme and ductal epithelium act as a rheostat for liver cell proliferation. Cell Stem Cell. PMID 34343491 DOI: 10.1016/j.stem.2021.07.002   
2021 Wong M, Gilmour D. Going your own way: Self-guidance mechanisms in cell migration. Current Opinion in Cell Biology. 72: 116-123. PMID 34403875 DOI: 10.1016/   
2021 Vella JL, Molodtsov A, Angeles CV, Branchini BR, Turk MJ, Huang YH. Dendritic cells maintain anti-tumor immunity by positioning CD8 skin-resident memory T cells. Life Science Alliance. 4. PMID 34362825 DOI: 10.26508/lsa.202101056