John Novembre - Publications

Affiliations: 
University of Chicago, Chicago, IL 
Area:
Population genetics

93 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Sohail M, Palma-Martínez MJ, Chong AY, Quinto-Cortés CD, Barberena-Jonas C, Medina-Muñoz SG, Ragsdale A, Delgado-Sánchez G, Cruz-Hervert LP, Ferreyra-Reyes L, Ferreira-Guerrero E, Mongua-Rodríguez N, Canizales-Quintero S, Jimenez-Kaufmann A, Moreno-Macías H, ... ... Novembre J, et al. Mexican Biobank advances population and medical genomics of diverse ancestries. Nature. 622: 775-783. PMID 37821706 DOI: 10.1038/s41586-023-06560-0  0.424
2023 Gloss AD, Steiner MC, Novembre J, Bergelson J. The design of mapping populations: Impacts of geographic scale on genetic architecture and mapping efficacy for defense and immunity. Current Opinion in Plant Biology. 74: 102399. PMID 37307746 DOI: 10.1016/j.pbi.2023.102399  0.392
2023 Cotter DJ, Hofgard EF, Novembre J, Szpiech ZA, Rosenberg NA. A rarefaction approach for measuring population differences in rare and common variation. Genetics. PMID 37075098 DOI: 10.1093/genetics/iyad070  0.342
2022 Muktupavela RA, Petr M, Ségurel L, Korneliussen T, Novembre J, Racimo F. Modeling the spatiotemporal spread of beneficial alleles using ancient genomes. Elife. 11. PMID 36537881 DOI: 10.7554/eLife.73767  0.686
2022 Steiner MC, Novembre J. Population genetic models for the spatial spread of adaptive variants: A review in light of SARS-CoV-2 evolution. Plos Genetics. 18: e1010391. PMID 36137003 DOI: 10.1371/journal.pgen.1010391  0.416
2022 Novembre J. The background and legacy of Lewontin's apportionment of human genetic diversity. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 377: 20200406. PMID 35430890 DOI: 10.1098/rstb.2020.0406  0.354
2022 Biddanda A, Steinrücken M, Novembre J. Properties of Two-Locus Genealogies and Linkage Disequilibrium in Temporally Structured Samples. Genetics. PMID 35294015 DOI: 10.1093/genetics/iyac038  0.303
2022 Liu CC, Witonsky D, Gosling A, Lee JH, Ringbauer H, Hagan R, Patel N, Stahl R, Novembre J, Aldenderfer M, Warinner C, Di Rienzo A, Jeong C. Ancient genomes from the Himalayas illuminate the genetic history of Tibetans and their Tibeto-Burman speaking neighbors. Nature Communications. 13: 1203. PMID 35260549 DOI: 10.1038/s41467-022-28827-2  0.437
2022 Vecchyo DO, Lohmueller KE, Novembre J. Haplotype-based inference of the distribution of fitness effects. Genetics. PMID 35100400 DOI: 10.1093/genetics/iyac002  0.392
2021 Spangenberg L, Fariello MI, Arce D, Illanes G, Greif G, Shin JY, Yoo SK, Seo JS, Robello C, Kim C, Novembre J, Sans M, Naya H. Indigenous Ancestry and Admixture in the Uruguayan Population. Frontiers in Genetics. 12: 733195. PMID 34630523 DOI: 10.3389/fgene.2021.733195  0.384
2021 Marcus J, Ha W, Barber RF, Novembre J. Fast and flexible estimation of effective migration surfaces. Elife. 10. PMID 34328078 DOI: 10.7554/eLife.61927  0.373
2020 Biddanda A, Rice DP, Novembre J. A variant-centric perspective on geographic patterns of human allele frequency variation. Elife. 9. PMID 33350384 DOI: 10.7554/eLife.60107  0.461
2020 Marcus JH, Posth C, Ringbauer H, Lai L, Skeates R, Sidore C, Beckett J, Furtwängler A, Olivieri A, Chiang CWK, Al-Asadi H, Dey K, Joseph TA, Liu CC, Der Sarkissian C, ... ... Novembre J, et al. Genetic history from the Middle Neolithic to present on the Mediterranean island of Sardinia. Nature Communications. 11: 939. PMID 32094358 DOI: 10.1038/S41467-020-14523-6  0.535
2020 Liu CC, Shringarpure S, Lange K, Novembre J. Exploring Population Structure with Admixture Models and Principal Component Analysis. Methods in Molecular Biology (Clifton, N.J.). 2090: 67-86. PMID 31975164 DOI: 10.1007/978-1-0716-0199-0_4  0.562
2020 Novembre J, Sethuraman A, Mathieson S. Decision letter: A community-maintained standard library of population genetic models Elife. DOI: 10.7554/Elife.54967.Sa1  0.418
2019 Peter BM, Petkova D, Novembre J. Genetic landscapes reveal how human genetic diversity aligns with geography. Molecular Biology and Evolution. PMID 31778174 DOI: 10.1093/Molbev/Msz280  0.799
2019 Koch E, Schweizer RM, Schweizer TM, Stahler DR, Smith DW, Wayne RK, Novembre J. De novo mutation rate estimation in wolves of known pedigree. Molecular Biology and Evolution. PMID 31297530 DOI: 10.1093/Molbev/Msz159  0.335
2019 Al-Asadi H, Petkova D, Stephens M, Novembre J. Estimating recent migration and population-size surfaces. Plos Genetics. 15: e1007908. PMID 30640906 DOI: 10.1371/Journal.Pgen.1007908  0.538
2018 Lindo J, Haas R, Hofman C, Apata M, Moraga M, Verdugo RA, Watson JT, Viviano Llave C, Witonsky D, Beall C, Warinner C, Novembre J, Aldenderfer M, Di Rienzo A. The genetic prehistory of the Andean highlands 7000 years BP though European contact. Science Advances. 4: eaau4921. PMID 30417096 DOI: 10.1126/Sciadv.Aau4921  0.561
2018 Chiang CWK, Marcus JH, Sidore C, Biddanda A, Al-Asadi H, Zoledziewska M, Pitzalis M, Busonero F, Maschio A, Pistis G, Steri M, Angius A, Lohmueller KE, Abecasis GR, Schlessinger D, ... ... Novembre J, et al. Genomic history of the Sardinian population. Nature Genetics. PMID 30224645 DOI: 10.1038/S41588-018-0215-8  0.548
2018 Jeong C, Witonsky DB, Basnyat B, Neupane M, Beall CM, Childs G, Craig SR, Novembre J, Di Rienzo A. Detecting past and ongoing natural selection among ethnically Tibetan women at high altitude in Nepal. Plos Genetics. 14: e1007650. PMID 30188897 DOI: 10.1371/Journal.Pgen.1007650  0.386
2018 de Barros Damgaard P, Martiniano R, Kamm J, Moreno-Mayar JV, Kroonen G, Peyrot M, Barjamovic G, Rasmussen S, Zacho C, Baimukhanov N, Zaibert V, Merz V, Biddanda A, Merz I, Loman V, ... ... Novembre J, et al. The first horse herders and the impact of early Bronze Age steppe expansions into Asia. Science (New York, N.Y.). PMID 29743352 DOI: 10.1126/Science.Aar7711  0.52
2018 Schweizer RM, Durvasula A, Smith J, Vohr SH, Stahler DR, Galaverni M, Thalmann O, Smith DW, Randi E, Ostrander EA, Green RE, Lohmueller KE, Novembre J, Wayne RK. Natural Selection and Origin of a Melanistic Allele in North American Gray Wolves. Molecular Biology and Evolution. 35: 1190-1209. PMID 29688543 DOI: 10.1093/Molbev/Msy031  0.508
2018 Reppell M, Novembre J. Using pseudoalignment and base quality to accurately quantify microbial community composition. Plos Computational Biology. 14: e1006096. PMID 29659582 DOI: 10.1371/Journal.Pcbi.1006096  0.357
2018 Novembre J, Barton NH. Tread Lightly Interpreting Polygenic Tests of Selection. Genetics. 208: 1351-1355. PMID 29618592 DOI: 10.1534/Genetics.118.300786  0.428
2018 Smith J, Coop G, Stephens M, Novembre J. Estimating time to the common ancestor for a beneficial allele. Molecular Biology and Evolution. PMID 29361025 DOI: 10.1093/Molbev/Msy006  0.432
2017 Serres-Armero A, Povolotskaya IS, Quilez J, Ramirez O, Santpere G, Kuderna LFK, Hernandez-Rodriguez J, Fernandez-Callejo M, Gomez-Sanchez D, Freedman AH, Fan Z, Novembre J, Navarro A, Boyko A, Wayne R, et al. Similar genomic proportions of copy number variation within gray wolves and modern dog breeds inferred from whole genome sequencing. Bmc Genomics. 18: 977. PMID 29258433 DOI: 10.1186/S12864-017-4318-X  0.475
2017 Jeong C, Peter BM, Basnyat B, Neupane M, Beall CM, Childs G, Craig SR, Novembre J, Di Rienzo A. Correction: A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau. Plos One. 12: e0183407. PMID 28797074 DOI: 10.1371/Journal.Pone.0183407  0.779
2017 Jeong C, Peter BM, Basnyat B, Neupane M, Beall CM, Childs G, Craig SR, Novembre J, Di Rienzo A. A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau. Plos One. 12: e0175885. PMID 28448508 DOI: 10.1371/Journal.Pone.0175885  0.813
2017 Steri M, Orrù V, Idda ML, Pitzalis M, Pala M, Zara I, Sidore C, Faà V, Floris M, Deiana M, Asunis I, Porcu E, Mulas A, Piras MG, Lobina M, ... ... Novembre J, et al. Overexpression of the Cytokine BAFF and Autoimmunity Risk. The New England Journal of Medicine. 376: 1615-1626. PMID 28445677 DOI: 10.1056/Nejmoa1610528  0.378
2017 Pala M, Zappala Z, Marongiu M, Li X, Davis JR, Cusano R, Crobu F, Kukurba KR, Gloudemans MJ, Reinier F, Berutti R, Piras MG, Mulas A, Zoledziewska M, Marongiu M, ... ... Novembre J, et al. Population- and individual-specific regulatory variation in Sardinia. Nature Genetics. PMID 28394350 DOI: 10.1038/Ng.3840  0.486
2017 Koch E, Novembre J. A Temporal Perspective on the Interplay of Demography and Selection on Deleterious Variation in Humans. G3 (Bethesda, Md.). PMID 28159863 DOI: 10.1534/G3.117.039651  0.504
2016 Wong EH, Khrunin A, Nichols L, Pushkarev D, Khokhrin D, Verbenko D, Evgrafov O, Knowles J, Novembre J, Limborska S, Valouev A. Reconstructing genetic history of Siberian and Northeastern European populations. Genome Research. PMID 27965293 DOI: 10.1101/Gr.202945.115  0.55
2016 de Manuel M, Kuhlwilm M, Frandsen P, Sousa VC, Desai T, Prado-Martinez J, Hernandez-Rodriguez J, Dupanloup I, Lao O, Hallast P, Schmidt JM, Heredia-Genestar JM, Benazzo A, Barbujani G, Peter BM, ... ... Novembre J, et al. Chimpanzee genomic diversity reveals ancient admixture with bonobos. Science (New York, N.Y.). 354: 477-481. PMID 27789843 DOI: 10.1126/Science.Aag2602  0.768
2016 Marcus JH, Novembre J. Visualizing the Geography of Genetic Variants. Bioinformatics (Oxford, England). PMID 27742697 DOI: 10.1093/Bioinformatics/Btw643  0.528
2016 Novembre J. Pritchard, Stephens, and Donnelly on Population Structure. Genetics. 204: 391-393. PMID 27729489 DOI: 10.1534/Genetics.116.195164  0.465
2016 Novembre J, Peter BM. Recent advances in the study of fine-scale population structure in humans. Current Opinion in Genetics & Development. 41: 98-105. PMID 27662060 DOI: 10.1016/J.Gde.2016.08.007  0.788
2016 Freedman AH, Schweizer RM, Ortega-Del Vecchyo D, Han E, Davis BW, Gronau I, Silva PM, Galaverni M, Fan Z, Marx P, Lorente-Galdos B, Ramirez O, Hormozdiari F, Alkan C, Vilà C, ... ... Novembre J, et al. Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs. Plos Genetics. 12: e1005851. PMID 26943675 DOI: 10.1371/Journal.Pgen.1005851  0.375
2016 Chiang CW, Ralph P, Novembre J. Conflation of Short Identity-by-Descent Segments Bias their Inferred Length Distribution. G3 (Bethesda, Md.). PMID 26935417 DOI: 10.1534/G3.116.027581  0.544
2015 Petkova D, Novembre J, Stephens M. Visualizing spatial population structure with estimated effective migration surfaces. Nature Genetics. PMID 26642242 DOI: 10.1038/Ng.3464  0.549
2015 Schweizer RM, Robinson J, Harrigan R, Silva P, Galverni M, Musiani M, Green RE, Novembre J, Wayne RK. Targeted capture and resequencing of 1040 genes reveal environmentally driven functional variation in gray wolves. Molecular Ecology. PMID 26562361 DOI: 10.1111/Mec.13467  0.421
2015 Sidore C, Busonero F, Maschio A, Porcu E, Naitza S, Zoledziewska M, Mulas A, Pistis G, Steri M, Danjou F, Kwong A, Ortega Del Vecchyo VD, Chiang CW, Bragg-Gresham J, Pitzalis M, ... ... Novembre J, et al. Genome sequencing elucidates Sardinian genetic architecture and augments association analyses for lipid and blood inflammatory markers. Nature Genetics. PMID 26366554 DOI: 10.1038/Ng.3368  0.629
2015 Zoledziewska M, Sidore C, Chiang CW, Sanna S, Mulas A, Steri M, Busonero F, Marcus JH, Marongiu M, Maschio A, Del Vecchyo DO, Floris M, Meloni A, Delitala A, Concas MP, ... ... Novembre J, et al. Height-reducing variants and selection for short stature in Sardinia. Nature Genetics. PMID 26366551 DOI: 10.1038/Ng.3403  0.624
2015 Schweizer RM, vonHoldt BM, Harrigan R, Knowles JC, Musiani M, Coltman D, Novembre J, Wayne RK. Genetic subdivision and candidate genes under selection in North American gray wolves. Molecular Ecology. PMID 26333947 DOI: 10.1111/Mec.13364  0.482
2015 Novembre J. Human evolution: ancient DNA steps into the language debate. Nature. 522: 164-5. PMID 26062506 DOI: 10.1038/522164A  0.434
2015 Kessner D, Novembre J. Power analysis of artificial selection experiments using efficient whole genome simulation of quantitative traits. Genetics. 199: 991-1005. PMID 25672748 DOI: 10.1534/Genetics.115.175075  0.455
2015 Han E, Sinsheimer JS, Novembre J. Fast and accurate site frequency spectrum estimation from low coverage sequence data. Bioinformatics (Oxford, England). 31: 720-7. PMID 25359894 DOI: 10.1093/Bioinformatics/Btu725  0.388
2014 Reppell M, Koch E, Peter BM, Novembre J. Surfing waves of data in San Diego: sophisticated analyses provide a broad view of human genetic diversity. Genome Biology. 15: 562. PMID 25651070 DOI: 10.1186/S13059-014-0562-4  0.774
2014 Yang WY, Platt A, Chiang CW, Eskin E, Novembre J, Pasaniuc B. Spatial localization of recent ancestors for admixed individuals. G3 (Bethesda, Md.). 4: 2505-18. PMID 25371484 DOI: 10.1534/G3.114.014274  0.651
2014 Veeramah KR, Novembre J. Demographic events and evolutionary forces shaping European genetic diversity Cold Spring Harbor Perspectives in Biology. 6. PMID 25059709 DOI: 10.1101/Cshperspect.A008516  0.518
2014 Novembre J. Variations on a common STRUCTURE: new algorithms for a valuable model. Genetics. 197: 809-11. PMID 25024035 DOI: 10.1534/Genetics.114.166264  0.414
2014 Rañola JMi, Novembre J, Lange K. Fast spatial ancestry via flexible allele frequency surfaces Bioinformatics (Oxford, England). 30: 2915-2922. PMID 25012181 DOI: 10.1093/Bioinformatics/Btu418  0.367
2014 Olalde I, Allentoft ME, Sánchez-Quinto F, Santpere G, Chiang CW, DeGiorgio M, Prado-Martinez J, Rodríguez JA, Rasmussen S, Quilez J, Ramírez O, Marigorta UM, Fernández-Callejo M, Prada ME, Encinas JM, ... ... Novembre J, et al. Derived immune and ancestral pigmentation alleles in a 7,000-year-old Mesolithic European. Nature. 507: 225-8. PMID 24463515 DOI: 10.1038/Nature12960  0.677
2014 Freedman AH, Gronau I, Schweizer RM, Ortega-Del Vecchyo D, Han E, Silva PM, Galaverni M, Fan Z, Marx P, Lorente-Galdos B, Beale H, Ramirez O, Hormozdiari F, Alkan C, Vilà C, ... ... Novembre J, et al. Genome sequencing highlights the dynamic early history of dogs. Plos Genetics. 10: e1004016. PMID 24453982 DOI: 10.1371/Journal.Pgen.1004016  0.453
2014 Zawistowski M, Reppell M, Wegmann D, St Jean PL, Ehm MG, Nelson MR, Novembre J, Zöllner S. Analysis of rare variant population structure in Europeans explains differential stratification of gene-based tests. European Journal of Human Genetics : Ejhg. 22: 1137-44. PMID 24398795 DOI: 10.1038/Ejhg.2013.297  0.404
2014 Kessner D, Novembre J. Forqs: Forward-in-time simulation of recombination, quantitative traits and selection Bioinformatics. 30: 576-577. PMID 24336146 DOI: 10.1093/Bioinformatics/Btt712  0.339
2014 Han E, Sinsheimer JS, Novembre J. Characterizing bias in population genetic inferences from low-coverage sequencing data Molecular Biology and Evolution. 31: 723-735. PMID 24288159 DOI: 10.1093/Molbev/Mst229  0.463
2013 Schaibley VM, Zawistowski M, Wegmann D, Ehm MG, Nelson MR, St Jean PL, Abecasis GR, Novembre J, Zöllner S, Li JZ. The influence of genomic context on mutation patterns in the human genome inferred from rare variants. Genome Research. 23: 1974-84. PMID 23990608 DOI: 10.1101/Gr.154971.113  0.47
2013 Rundel CW, Wunder MB, Alvarado AH, Ruegg KC, Harrigan R, Schuh A, Kelly JF, Siegel RB, Desante DF, Smith TB, Novembre J. Novel statistical methods for integrating genetic and stable isotope data to infer individual-level migratory connectivity. Molecular Ecology. 22: 4163-76. PMID 23906339 DOI: 10.1111/Mec.12393  0.455
2013 Kessner D, Turner TL, Novembre J. Maximum likelihood estimation of frequencies of known haplotypes from pooled sequence data. Molecular Biology and Evolution. 30: 1145-58. PMID 23364324 DOI: 10.1093/Molbev/Mst016  0.339
2012 Novembre J. Commentary on Sokal, Oden, and Thomson's "a problem with synthetic maps" (1999). Human Biology. 84: 623-626. PMID 23526348 DOI: 10.3378/027.084.0512  0.353
2012 Platt A, Novembre J. A new era of human population genetics. Genome Biology. 13: 182. PMID 23268745 DOI: 10.1186/Gb-2012-13-12-182  0.55
2012 Yang WY, Novembre J, Eskin E, Halperin E. A model-based approach for analysis of spatial structure in genetic data Nature Genetics. 44: 725-731. PMID 22610118 DOI: 10.7490/F1000Research.1093100.1  0.496
2012 Nelson MR, Wegmann D, Ehm MG, Kessner D, St Jean P, Verzilli C, Shen J, Tang Z, Bacanu SA, Fraser D, Warren L, Aponte J, Zawistowski M, Liu X, Zhang H, ... ... Novembre J, et al. An abundance of rare functional variants in 202 drug target genes sequenced in 14,002 people. Science (New York, N.Y.). 337: 100-4. PMID 22604722 DOI: 10.1126/Science.1217876  0.484
2012 Rubio JP, Topp S, Warren L, St Jean PL, Wegmann D, Kessner D, Novembre J, Shen J, Fraser D, Aponte J, Nangle K, Cardon LR, Ehm MG, Chissoe SL, Whittaker JC, et al. Deep sequencing of the LRRK2 gene in 14,002 individuals reveals evidence of purifying selection and independent origin of the p.Arg1628Pro mutation in Europe. Human Mutation. 33: 1087-98. PMID 22415848 DOI: 10.1002/Humu.22075  0.395
2012 Novembre J, Han E. Human population structure and the adaptive response to pathogen-induced selection pressures Philosophical Transactions of the Royal Society B: Biological Sciences. 367: 878-886. PMID 22312055 DOI: 10.1098/Rstb.2011.0305  0.466
2012 Platt A, Novembre J. A new era of human population genetics Genome Biology. 182. DOI: 10.1186/gb4066  0.446
2011 Novembre J, Ramachandran S. Perspectives on human population structure at the cusp of the sequencing Era Annual Review of Genomics and Human Genetics. 12: 245-274. PMID 21801023 DOI: 10.1146/Annurev-Genom-090810-183123  0.568
2011 Gross A, Tönjes A, Kovacs P, Veeramah KR, Ahnert P, Roshyara NR, Gieger C, Rueckert IM, Loeffler M, Stoneking M, Wichmann HE, Novembre J, Stumvoll M, Scholz M. Population-genetic comparison of the Sorbian isolate population in Germany with the German KORA population using genome-wide SNP arrays. Bmc Genetics. 12: 67. PMID 21798003 DOI: 10.1186/1471-2156-12-67  0.538
2011 Wegmann D, Kessner DE, Veeramah KR, Mathias RA, Nicolae DL, Yanek LR, Sun YV, Torgerson DG, Rafaels N, Mosley T, Becker LC, Ruczinski I, Beaty TH, Kardia SL, Meyers DA, ... ... Novembre J, et al. Recombination rates in admixed individuals identified by ancestry-based inference. Nature Genetics. 43: 847-53. PMID 21775992 DOI: 10.1038/Ng.894  0.612
2011 vonHoldt BM, Pollinger JP, Earl DA, Knowles JC, Boyko AR, Parker H, Geffen E, Pilot M, Jedrzejewski W, Jedrzejewska B, Sidorovich V, Greco C, Randi E, Musiani M, Kays R, ... ... Novembre J, et al. A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids. Genome Research. 21: 1294-305. PMID 21566151 DOI: 10.1101/Gr.116301.110  0.469
2011 Veeramah KR, Tönjes A, Kovacs P, Gross A, Wegmann D, Geary P, Gasperikova D, Klimes I, Scholz M, Novembre J, Stumvoll M. Genetic variation in the Sorbs of eastern Germany in the context of broader European genetic diversity. European Journal of Human Genetics : Ejhg. 19: 995-1001. PMID 21559053 DOI: 10.1038/Ejhg.2011.65  0.524
2010 Destro-Bisol G, Jobling MA, Rocha J, Novembre J, Richards MB, Mulligan C, Batini C, Manni F. Molecular Anthropology in the genomic era Journal of Anthropological Sciences. 88: 93-112. PMID 20834052  0.372
2010 Boyko AR, Quignon P, Li L, Schoenebeck JJ, Degenhardt JD, Lohmueller KE, Zhao K, Brisbin A, Parker HG, vonHoldt BM, Cargill M, Auton A, Reynolds A, Elkahloun AG, Castelhano M, ... ... Novembre J, et al. A simple genetic architecture underlies morphological variation in dogs. Plos Biology. 8: e1000451. PMID 20711490 DOI: 10.1371/Journal.Pbio.1000451  0.472
2010 Royal CD, Novembre J, Fullerton SM, Goldstein DB, Long JC, Bamshad MJ, Clark AG. Inferring genetic ancestry: opportunities, challenges, and implications. American Journal of Human Genetics. 86: 661-73. PMID 20466090 DOI: 10.1016/J.Ajhg.2010.03.011  0.447
2010 Vonholdt BM, Pollinger JP, Lohmueller KE, Han E, Parker HG, Quignon P, Degenhardt JD, Boyko AR, Earl DA, Auton A, Reynolds A, Bryc K, Brisbin A, Knowles JC, Mosher DS, ... ... Novembre J, et al. Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication. Nature. 464: 898-902. PMID 20237475 DOI: 10.1038/Nature08837  0.541
2010 Franois O, Currat M, Ray N, Han E, Excoffier L, Novembre J. Principal component analysis under population genetic models of range expansion and admixture Molecular Biology and Evolution. 27: 1257-1268. PMID 20097660 DOI: 10.1093/Molbev/Msq010  0.643
2010 Ostrander EA, Boyko A, Quignon P, Li L, Schoenebeck JJ, Degenhardt JD, Lohmueller KE, Zhao K, Brisbin A, Parker HG, Holdt BMV, Cargill M, Auton A, Reynolds A, Elkahloun AG, ... ... Novembre J, et al. Tracking genes and finding mutations: finding genes for complex traits in the domestic dog (Canis familiaris) Genome Biology. 11: 1-1. DOI: 10.1186/Gb-2010-11-S1-I23  0.461
2009 Novembre J, Di Rienzo A. Spatial patterns of variation due to natural selection in humans. Nature Reviews. Genetics. 10: 745-55. PMID 19823195 DOI: 10.1038/Nrg2632  0.499
2009 Alexander DH, Novembre J, Lange K. Fast model-based estimation of ancestry in unrelated individuals Genome Research. 19: 1655-1664. PMID 19648217 DOI: 10.1101/Gr.094052.109  0.361
2009 Novembre J, Slatkin M. Likelihood-based inference in isolation-by-distance models using the spatial distribution of low-frequency alleles. Evolution; International Journal of Organic Evolution. 63: 2914-25. PMID 19624728 DOI: 10.1111/J.1558-5646.2009.00775.X  0.69
2009 Coop G, Pickrell JK, Novembre J, Kudaravalli S, Li J, Absher D, Myers RM, Cavalli-Sforza LL, Feldman MW, Pritchard JK. The role of geography in human adaptation. Plos Genetics. 5: e1000500. PMID 19503611 DOI: 10.1371/Journal.Pgen.1000500  0.54
2009 Pickrell JK, Coop G, Novembre J, Kudaravalli S, Li JZ, Absher D, Srinivasan BS, Barsh GS, Myers RM, Feldman MW, Pritchard JK. Signals of recent positive selection in a worldwide sample of human populations. Genome Research. 19: 826-37. PMID 19307593 DOI: 10.1101/Gr.087577.108  0.509
2009 Auton A, Bryc K, Boyko AR, Lohmueller KE, Novembre J, Reynolds A, Indap A, Wright MH, Degenhardt JD, Gutenkunst RN, King KS, Nelson MR, Bustamante CD. Global distribution of genomic diversity underscores rich complex history of continental human populations Genome Research. 19: 795-803. PMID 19218534 DOI: 10.1101/Gr.088898.108  0.567
2008 Nelson MR, Bryc K, King KS, Indap A, Boyko AR, Novembre J, Briley LP, Maruyama Y, Waterworth DM, Waeber G, Vollenweider P, Oksenberg JR, Hauser SL, Stirnadel HA, Kooner JS, et al. The Population Reference Sample, POPRES: a resource for population, disease, and pharmacological genetics research. American Journal of Human Genetics. 83: 347-58. PMID 18760391 DOI: 10.1016/J.Ajhg.2008.08.005  0.529
2008 Novembre J, Johnson T, Bryc K, Kutalik Z, Boyko AR, Auton A, Indap A, King KS, Bergmann S, Nelson MR, Stephens M, Bustamante CD. Genes mirror geography within Europe. Nature. 456: 98-101. PMID 18758442 DOI: 10.1038/Nature07331  0.564
2008 Novembre J, Stephens M. Interpreting principal component analyses of spatial population genetic variation Nature Genetics. 40: 646-649. PMID 18425127 DOI: 10.1038/Ng.139  0.497
2007 Novembre J, Pritchard JK, Coop G. Adaptive drool in the gene pool. Nature Genetics. 39: 1188-90. PMID 17898775 DOI: 10.1038/Ng1007-1188  0.394
2007 Rosenblum EB, Novembre J. Ascertainment bias in spatially structured populations: a case study in the eastern fence lizard. The Journal of Heredity. 98: 331-6. PMID 17611259 DOI: 10.1093/Jhered/Esm031  0.489
2005 Novembre J, Galvani AP, Slatkin M. The geographic spread of the CCR5 Delta32 HIV-resistance allele. Plos Biology. 3: e339. PMID 16216086 DOI: 10.1371/Journal.Pbio.0030339  0.676
2005 Galvani AP, Novembre J. The evolutionary history of the CCR5-Delta32 HIV-resistance mutation. Microbes and Infection / Institut Pasteur. 7: 302-309. PMID 15715976 DOI: 10.1016/J.Micinf.2004.12.006  0.351
2003 Herbeck JT, Novembre J. Codon usage patterns in cytochrome oxidase I across multiple insect orders Journal of Molecular Evolution. 56: 691-701. PMID 12911032 DOI: 10.1007/S00239-002-2437-7  0.352
2000 Excoffier L, Novembre J, Schneider S. SIMCOAL: A general coalescent program for the simulation of molecular data in interconnected populations with arbitrary demography Journal of Heredity. 91: 506-509. PMID 11218093 DOI: 10.1093/Jhered/91.6.506  0.566
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