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Gaudenz Danuser, PhD - Publications

Affiliations: 
2012- Cell Biology University of Texas Southwestern Medical Center, Dallas, TX, United States 
Area:
computer vision, light sheet microscopy
Website:
http://lccb.hms.harvard.edu/
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73 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Han SJ, Azarova EV, Whitewood AJ, Bachir A, Guttierrez E, Groisman A, Horwitz AR, Goult BT, Dean KM, Danuser G. Pre-complexation of talin and vinculin without tension is required for efficient nascent adhesion maturation. Elife. 10. PMID 33783351 DOI: 10.7554/eLife.66151  0.588
2020 Welf ES, Miles CE, Huh J, Sapoznik E, Chi J, Driscoll MK, Isogai T, Noh J, Weems AD, Pohlkamp T, Dean K, Fiolka R, Mogilner A, Danuser G. Actin-Membrane Release Initiates Cell Protrusions. Developmental Cell. PMID 33308479 DOI: 10.1016/j.devcel.2020.11.024  0.671
2020 Bhave M, Mino RE, Wang X, Lee J, Grossman HM, Lakoduk AM, Danuser G, Schmid SL, Mettlen M. Functional characterization of 67 endocytic accessory proteins using multiparametric quantitative analysis of CCP dynamics. Proceedings of the National Academy of Sciences of the United States of America. PMID 33257546 DOI: 10.1073/pnas.2020346117  0.787
2020 Wang X, Chen Z, Mettlen M, Noh J, Schmid SL, Danuser G. DASC, a sensitive classifier for measuring discrete early stages in clathrin-mediated endocytosis. Elife. 9. PMID 32352376 DOI: 10.7554/Elife.53686  0.507
2020 Segal D, Chang B, Mazloom-Farsibaf H, Fiolka R, Amatruda J, Danuser G. Abstract PHB01: The zebrafish as a mechanical filter: Using zebrafish xenografts to model Ewing sarcoma metastasis in vivo Cancer Research. 80. DOI: 10.1158/1538-7445.Camodels2020-Phb01  0.678
2019 Chakraborty T, Driscoll MK, Jeffery E, Murphy MM, Roudot P, Chang BJ, Vora S, Wong WM, Nielson CD, Zhang H, Zhemkov V, Hiremath C, De La Cruz ED, Yi Y, Bezprozvanny I, ... ... Danuser G, et al. Light-sheet microscopy of cleared tissues with isotropic, subcellular resolution. Nature Methods. 16: 1109-1113. PMID 31673159 DOI: 10.1038/S41592-019-0615-4  0.764
2019 Driscoll MK, Welf ES, Jamieson AR, Dean KM, Isogai T, Fiolka R, Danuser G. Robust and automated detection of subcellular morphological motifs in 3D microscopy images. Nature Methods. PMID 31501548 DOI: 10.1038/S41592-019-0539-Z  0.788
2019 Murali VS, Chang BJ, Fiolka R, Danuser G, Cobanoglu MC, Welf ES. An image-based assay to quantify changes in proliferation and viability upon drug treatment in 3D microenvironments. Bmc Cancer. 19: 502. PMID 31138163 DOI: 10.1186/S12885-019-5694-1  0.672
2019 Mohan AS, Dean KM, Isogai T, Kasitinon SY, Murali VS, Roudot P, Groisman A, Reed DK, Welf ES, Han SJ, Noh J, Danuser G. Enhanced Dendritic Actin Network Formation in Extended Lamellipodia Drives Proliferation in Growth-Challenged Rac1 Melanoma Cells. Developmental Cell. 49: 444-460.e9. PMID 31063759 DOI: 10.1016/J.Devcel.2019.04.007  0.649
2019 Renkawitz J, Kopf A, Stopp J, de Vries I, Driscoll MK, Merrin J, Hauschild R, Welf ES, Danuser G, Fiolka R, Sixt M. Nuclear positioning facilitates amoeboid migration along the path of least resistance. Nature. PMID 30944468 DOI: 10.1038/S41586-019-1087-5  0.702
2019 Wang X, Chen Z, Schmid SL, Danuser GM. Differential Roles of Pioneer Proteins in Initiation and Stabilization of Early Clathrin Coat Unveiled by a Novel Disassembly Bias Score Biophysical Journal. 116: 91a. DOI: 10.1016/j.bpj.2018.11.534  0.408
2018 Ma X, Dagliyan O, Hahn KM, Danuser G. Profiling cellular morphodynamics by spatiotemporal spectrum decomposition. Plos Computational Biology. 14: e1006321. PMID 30071020 DOI: 10.1371/Journal.Pcbi.1006321  0.735
2018 Srinivasan S, Burckhardt CJ, Bhave M, Chen Z, Chen PH, Wang X, Danuser G, Schmid SL. A noncanonical role for dynamin-1 in regulating early stages of clathrin-mediated endocytosis in non-neuronal cells. Plos Biology. 16: e2005377. PMID 29668686 DOI: 10.1371/Journal.Pbio.2005377  0.486
2018 Mettlen M, Chen PH, Srinivasan S, Danuser G, Schmid SL. Regulation of Clathrin-Mediated Endocytosis. Annual Review of Biochemistry. PMID 29661000 DOI: 10.1146/Annurev-Biochem-062917-012644  0.463
2018 Mohan A, Dean K, Murali V, Yuan S, Isogai T, Han S, Welf E, Danuser G. 1264 Rac1P29S coordinates the actin cytoskeleton to mediate a mechanosensitive proliferative advantage in melanoma Journal of Investigative Dermatology. 138: S214. DOI: 10.1016/J.Jid.2018.03.1279  0.586
2018 Fiolka RP, Dean KM, Driscoll M, Welf E, Danuser G. Quantitative Imaging of Cellular Morphodynamics and Signaling with Light-Sheet Microscopy Biophysical Journal. 114: 6a-7a. DOI: 10.1016/J.Bpj.2017.11.068  0.748
2017 Roudot P, Liya Ding, Jaqaman K, Kervrann C, Danuser G. Piecewise-Stationary Motion Modeling and Iterative Smoothing to Track Heterogeneous Particle Motions in Dense Environments. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. 26: 5395-5410. PMID 29388914 DOI: 10.1109/Tip.2017.2707803  0.653
2017 Werbin JL, Avendaño MS, Becker V, Jungmann R, Yin P, Danuser G, Sorger PK. Multiplexed Exchange-PAINT imaging reveals ligand-dependent EGFR and Met interactions in the plasma membrane. Scientific Reports. 7: 12150. PMID 28939861 DOI: 10.1038/S41598-017-12257-Y  0.782
2017 Zaritsky A, Obolski U, Gan Z, Reis CR, Kadlecova Z, Du Y, Schmid SL, Danuser G. Decoupling global biases and local interactions between cell biological variables. Elife. 6. PMID 28287393 DOI: 10.7554/Elife.22323  0.465
2017 Mohan A, Dean K, Han S, Welf E, Danuser G. LB993 Focal adhesions mediate Rac1P29S-dependent drug resistance to MAPK inhibitors in melanoma Journal of Investigative Dermatology. 137: B11. DOI: 10.1016/J.Jid.2017.07.075  0.586
2017 Ma X, Dagliyan O, Hahn K, Danuser G. Morphodynamic Profiling of Cell Protrusion Based on Spatiotemporal Spectrum Decomposition and Unsupervised Clustering Biophysical Journal. 112: 45a. DOI: 10.1016/J.Bpj.2016.11.285  0.741
2017 Azoitei ML, Noh J, Sandi MJ, Roudot P, Rottapel R, Danuser G, Hahn KM. Novel Biosensor Design Reveals the Role and Regulation of GEF-H1 in Cell Migration Biophysical Journal. 112: 461a. DOI: 10.1016/J.Bpj.2016.11.2471  0.304
2016 Hodgson L, Spiering D, Sabouri-Ghomi M, Dagliyan O, DerMardirossian C, Danuser G, Hahn KM. FRET binding antenna reports spatiotemporal dynamics of GDI-Cdc42 GTPase interactions. Nature Chemical Biology. PMID 27501396 DOI: 10.1038/Nchembio.2145  0.737
2016 Welf ES, Driscoll MK, Dean KM, Schäfer C, Chu J, Davidson MW, Lin MZ, Danuser G, Fiolka R. Quantitative Multiscale Cell Imaging in Controlled 3D Microenvironments. Developmental Cell. 36: 462-75. PMID 26906741 DOI: 10.1016/J.Devcel.2016.01.022  0.798
2015 Dean KM, Roudot P, Welf ES, Danuser G, Fiolka R. Deconvolution-free Subcellular Imaging with Axially Swept Light Sheet Microscopy. Biophysical Journal. 108: 2807-15. PMID 26083920 DOI: 10.1016/J.Bpj.2015.05.013  0.768
2015 Dean KM, Roudot P, Welf ES, Danuser G, Fiolka R. Deconvolution-free Subcellular Imaging with Axially Swept Light Sheet Microscopy Biophysical Journal. 108: 2807-2815. DOI: 10.1016/j.bpj.2015.05.013  0.748
2015 Jaqaman K, Galbraith JA, Davidson M, Danuser G, Galbraith CG. Multi-Scale Linkages between Single-Molecule Integrin Dynamics and Cell Protrusion Biophysical Journal. 108: 418a. DOI: 10.1016/J.Bpj.2014.11.2287  0.692
2013 Lowery LA, Stout A, Faris AE, Ding L, Baird MA, Davidson MW, Danuser G, Van Vactor D. Growth cone-specific functions of XMAP215 in restricting microtubule dynamics and promoting axonal outgrowth. Neural Development. 8: 22. PMID 24289819 DOI: 10.1186/1749-8104-8-22  0.764
2013 Marco E, Dorn JF, Hsu PH, Jaqaman K, Sorger PK, Danuser G. S. cerevisiae chromosomes biorient via gradual resolution of syntely between S phase and anaphase. Cell. 154: 1127-39. PMID 23993100 DOI: 10.1016/J.Cell.2013.08.008  0.788
2013 Aguet F, Antonescu CN, Mettlen M, Schmid SL, Danuser G. Advances in analysis of low signal-to-noise images link dynamin and AP2 to the functions of an endocytic checkpoint. Developmental Cell. 26: 279-91. PMID 23891661 DOI: 10.1016/J.Devcel.2013.06.019  0.451
2013 Long JB, Bagonis M, Lowery LA, Lee H, Danuser G, Van Vactor D. Multiparametric analysis of CLASP-interacting protein functions during interphase microtubule dynamics. Molecular and Cellular Biology. 33: 1528-45. PMID 23382075 DOI: 10.1128/Mcb.01442-12  0.773
2013 Florian S, Chittajallu DR, Kohler RH, Orth JD, Sorger PK, Weissleder R, Danuser G, Mitchison TJ. Abstract A297: Microtubule targeting antimitotic drugs induce a lower mitotic arrest than clinically less effective antimitotic Eg5 inhibitors in mouse xenografts. Molecular Cancer Therapeutics. 12. DOI: 10.1158/1535-7163.Targ-13-A297  0.475
2012 Chanda A, Githaka J, Danuser G, Touret N, Jaqaman K. Single Molecule Study of Thrombospondin-1 Receptors in the Endothelial Cell Plasma Membrane Biophysical Journal. 102: 513a. DOI: 10.1016/J.Bpj.2011.11.2811  0.684
2012 Schmidt U, Werbin JL, Sorger PK, Danuser G. Single Molecule Counting using STORM/PALM Biophysical Journal. 102: 384a-385a. DOI: 10.1016/J.Bpj.2011.11.2104  0.794
2011 Nunez D, Antonescu C, Mettlen M, Liu A, Schmid SL, Loerke D, Danuser G. Hotspots organize clathrin-mediated endocytosis by efficient recruitment and retention of nucleating resources. Traffic (Copenhagen, Denmark). 12: 1868-78. PMID 21883765 DOI: 10.1111/J.1600-0854.2011.01273.X  0.485
2011 Jaqaman K, Kuwata H, Touret N, Collins R, Trimble WS, Danuser G, Grinstein S. Cytoskeletal control of CD36 diffusion promotes its receptor and signaling function. Cell. 146: 593-606. PMID 21854984 DOI: 10.1016/J.Cell.2011.06.049  0.65
2011 Applegate KT, Besson S, Matov A, Bagonis MH, Jaqaman K, Danuser G. plusTipTracker: Quantitative image analysis software for the measurement of microtubule dynamics. Journal of Structural Biology. 176: 168-84. PMID 21821130 DOI: 10.1016/J.Jsb.2011.07.009  0.686
2011 Antonescu CN, Aguet F, Danuser G, Schmid SL. Phosphatidylinositol-(4,5)-bisphosphate regulates clathrin-coated pit initiation, stabilization, and size. Molecular Biology of the Cell. 22: 2588-600. PMID 21613550 DOI: 10.1091/Mbc.E11-04-0362  0.458
2011 Loerke D, Mettlen M, Schmid SL, Danuser G. Measuring the hierarchy of molecular events during clathrin-mediated endocytosis. Traffic (Copenhagen, Denmark). 12: 815-25. PMID 21447041 DOI: 10.1111/J.1600-0854.2011.01197.X  0.473
2011 Lowery LA, Lee H, Danuser G, Van Vactor D. Antagonism between the microtubule plus-end-tracking proteins Msps and CLASP during Abl kinase-mediated axon pathfinding Developmental Biology. 356: 200. DOI: 10.1016/J.Ydbio.2011.05.281  0.637
2011 Jaqaman K, Kuwata H, Touret N, Collins R, Trimble WS, Danuser G, Grinstein S. Cytoskeletal Control of Receptor Diffusion in Membrane Promotes CD36 Function and Signaling Biophysical Journal. 100: 21a. DOI: 10.1016/J.Bpj.2010.12.323  0.67
2010 Liu AP, Aguet F, Danuser G, Schmid SL. Local clustering of transferrin receptors promotes clathrin-coated pit initiation. The Journal of Cell Biology. 191: 1381-93. PMID 21187331 DOI: 10.1083/Jcb.201008117  0.454
2010 Antonescu CN, Danuser G, Schmid SL. Phosphatidic acid plays a regulatory role in clathrin-mediated endocytosis. Molecular Biology of the Cell. 21: 2944-52. PMID 20573978 DOI: 10.1091/Mbc.E10-05-0421  0.434
2010 Mettlen M, Loerke D, Yarar D, Danuser G, Schmid SL. Cargo- and adaptor-specific mechanisms regulate clathrin-mediated endocytosis. The Journal of Cell Biology. 188: 919-33. PMID 20231386 DOI: 10.1083/Jcb.200908078  0.466
2010 Jaqaman K, King EM, Amaro AC, Winter JR, Dorn JF, Elliott HL, McHedlishvili N, McClelland SE, Porter IM, Posch M, Toso A, Danuser G, McAinsh AD, Meraldi P, Swedlow JR. Kinetochore alignment within the metaphase plate is regulated by centromere stiffness and microtubule depolymerases. The Journal of Cell Biology. 188: 665-79. PMID 20212316 DOI: 10.1083/Jcb.200909005  0.779
2010 Gatlin JC, Matov A, Danuser G, Mitchison TJ, Salmon ED. Directly probing the mechanical properties of the spindle and its matrix. The Journal of Cell Biology. 188: 481-9. PMID 20176922 DOI: 10.1083/Jcb.200907110  0.459
2010 Kanchanawong P, Hou JH, Zajac AL, Aguet F, Davidson MW, Danuser G, Jaqaman K, Waterman CM. Analysis of Single Integrin Behavior in Living Cells Biophysical Journal. 98: 558a. DOI: 10.1016/J.Bpj.2009.12.3023  0.682
2010 Applegate KT, Yang G, Danuser G. High‐Content Analysis of Cytoskeleton Functions by Fluorescent Speckle Microscopy Nanotechnology. 167-206. DOI: 10.1002/9783527628155.Nanotech055  0.341
2009 Jaqaman K, Danuser G. Computational image analysis of cellular dynamics: a case study based on particle tracking. Cold Spring Harbor Protocols. 2009: pdb.top65. PMID 20150102 DOI: 10.1101/Pdb.Top65  0.688
2009 Liu AP, Loerke D, Schmid SL, Danuser G. Global and local regulation of clathrin-coated pit dynamics detected on patterned substrates. Biophysical Journal. 97: 1038-47. PMID 19686651 DOI: 10.1016/J.Bpj.2009.06.003  0.499
2009 Mettlen M, Stoeber M, Loerke D, Antonescu CN, Danuser G, Schmid SL. Endocytic accessory proteins are functionally distinguished by their differential effects on the maturation of clathrin-coated pits. Molecular Biology of the Cell. 20: 3251-60. PMID 19458185 DOI: 10.1091/Mbc.E09-03-0256  0.493
2009 Loerke D, Mettlen M, Yarar D, Jaqaman K, Jaqaman H, Danuser G, Schmid SL. Cargo and dynamin regulate clathrin-coated pit maturation. Plos Biology. 7: e57. PMID 19296720 DOI: 10.1371/Journal.Pbio.1000057  0.727
2009 Gatlin JC, Matov A, Groen AC, Needleman DJ, Maresca TJ, Danuser G, Mitchison TJ, Salmon ED. Spindle fusion requires dynein-mediated sliding of oppositely oriented microtubules. Current Biology : Cb. 19: 287-96. PMID 19230671 DOI: 10.1016/J.Cub.2009.01.055  0.469
2009 Liu AP, Loerke D, Schmid SL, Danuser G. Cortical Tension Affects the Spatial Heterogeneity of Clathrin-Coated Pit Dynamics Biophysical Journal. 96: 570a. DOI: 10.1016/J.Bpj.2008.12.3734  0.515
2009 Jaqaman K, Kuwata H, Trimble W, Grinstein S, Danuser G. Cortical Cytoskeletal Structures Constrain CD36 Receptor Motion at the Cell Surface to Enhance Aggregation and Signaling Biophysical Journal. 96: 281a-282a. DOI: 10.1016/J.Bpj.2008.12.1394  0.675
2008 Yang G, Cameron LA, Maddox PS, Salmon ED, Danuser G. Regional variation of microtubule flux reveals microtubule organization in the metaphase meiotic spindle. The Journal of Cell Biology. 182: 631-9. PMID 18710922 DOI: 10.1083/Jcb.200801105  0.644
2008 Jaqaman K, Loerke D, Mettlen M, Kuwata H, Grinstein S, Schmid SL, Danuser G. Robust single-particle tracking in live-cell time-lapse sequences. Nature Methods. 5: 695-702. PMID 18641657 DOI: 10.1038/Nmeth.1237  0.704
2008 Dorn JF, Danuser G, Yang G. Computational processing and analysis of dynamic fluorescence image data. Methods in Cell Biology. 85: 497-538. PMID 18155477 DOI: 10.1016/S0091-679X(08)85022-4  0.786
2007 Soutoglou E, Dorn JF, Sengupta K, Jasin M, Nussenzweig A, Ried T, Danuser G, Misteli T. Positional stability of single double-strand breaks in mammalian cells. Nature Cell Biology. 9: 675-82. PMID 17486118 DOI: 10.1038/Ncb1591  0.768
2007 Jaqaman K, Dorn JF, Marco E, Sorger PK, Danuser G. Phenotypic clustering of yeast mutants based on kinetochore microtubule dynamics. Bioinformatics (Oxford, England). 23: 1666-73. PMID 17483508 DOI: 10.1093/Bioinformatics/Btm230  0.795
2006 Jaqaman K, Danuser G. Linking data to models: data regression. Nature Reviews. Molecular Cell Biology. 7: 813-9. PMID 17006434 DOI: 10.1038/Nrm2030  0.635
2006 Jaqaman K, Dorn JF, Jelson GS, Tytell JD, Sorger PK, Danuser G. Comparative autoregressive moving average analysis of kinetochore microtubule dynamics in yeast. Biophysical Journal. 91: 2312-25. PMID 16940476 DOI: 10.1529/Biophysj.106.080333  0.783
2006 Danuser G, Waterman-Storer CM. Quantitative fluorescent speckle microscopy of cytoskeleton dynamics. Annual Review of Biophysics and Biomolecular Structure. 35: 361-87. PMID 16689641 DOI: 10.1146/Annurev.Biophys.35.040405.102114  0.315
2006 Cameron LA, Yang G, Cimini D, Canman JC, Kisurina-Evgenieva O, Khodjakov A, Danuser G, Salmon ED. Kinesin 5-independent poleward flux of kinetochore microtubules in PtK1 cells. The Journal of Cell Biology. 173: 173-9. PMID 16636143 DOI: 10.1083/Jcb.200601075  0.471
2005 Dorn JF, Jaqaman K, Rines DR, Jelson GS, Sorger PK, Danuser G. Yeast kinetochore microtubule dynamics analyzed by high-resolution three-dimensional microscopy. Biophysical Journal. 89: 2835-54. PMID 16192284 DOI: 10.1529/Biophysj.104.058461  0.795
2003 Thomann D, Dorn J, Sorger PK, Danuser G. Automatic fluorescent tag localization II: Improvement in super-resolution by relative tracking. Journal of Microscopy. 211: 230-48. PMID 12950472 DOI: 10.1046/J.1365-2818.2003.01223.X  0.797
2003 Danuser G, Waterman-Storer CM. Quantitative fluorescent speckle microscopy: where it came from and where it is going. Journal of Microscopy. 211: 191-207. PMID 12950468 DOI: 10.1046/J.1365-2818.2003.01222.X  0.332
2003 Vallotton P, Ponti A, Waterman-Storer CM, Salmon ED, Danuser G. Recovery, visualization, and analysis of actin and tubulin polymer flow in live cells: a fluorescent speckle microscopy study. Biophysical Journal. 85: 1289-306. PMID 12885672 DOI: 10.1016/S0006-3495(03)74564-0  0.522
2002 Thomann D, Rines DR, Sorger PK, Danuser G. Automatic fluorescent tag detection in 3D with super-resolution: application to the analysis of chromosome movement. Journal of Microscopy. 208: 49-64. PMID 12366597 DOI: 10.1046/J.1365-2818.2002.01066.X  0.512
2001 Maddox P, Danuser G. Fluorescent speckle microscopy - A tutorial European Cells and Materials. 1: 16.  0.485
2000 Danuser G, Oldenbourg R. Probing f-actin flow by tracking shape fluctuations of radial bundles in lamellipodia of motile cells Biophysical Journal. 79: 191-201. PMID 10866947 DOI: 10.1016/S0006-3495(00)76283-7  0.597
2000 Danuser G, Tran PT, Salmon ED. Tracking differential interference contrast diffraction line images with nanometre sensitivity. Journal of Microscopy. 198: 34-53. PMID 10781207 DOI: 10.1046/J.1365-2818.2000.00678.X  0.503
2000 Oldenbourg R, Katoh K, Danuser G. Mechanism of lateral movement of filopodia and radial actin bundles across neuronal growth cones Biophysical Journal. 78: 1176-1182. PMID 10692307 DOI: 10.1016/S0006-3495(00)76675-6  0.584
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