Gaudenz Danuser, PhD - Publications

Affiliations: 
2012- Cell Biology University of Texas Southwestern Medical Center, Dallas, TX, United States 
Area:
computer vision, light sheet microscopy
Website:
http://lccb.hms.harvard.edu/

155 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Chakraborty T, Driscoll MK, Jeffery E, Murphy MM, Roudot P, Chang BJ, Vora S, Wong WM, Nielson CD, Zhang H, Zhemkov V, Hiremath C, De La Cruz ED, Yi Y, Bezprozvanny I, ... ... Danuser G, et al. Light-sheet microscopy of cleared tissues with isotropic, subcellular resolution. Nature Methods. 16: 1109-1113. PMID 31673159 DOI: 10.1038/s41592-019-0615-4  0.6
2019 Manandhar S, Bouthemy P, Welf E, Danuser G, Roudot P, Kervrann C. 3D Flow Field Estimation and Assessment for Live Cell Fluorescence Microscopy. Bioinformatics (Oxford, England). PMID 31633779 DOI: 10.1093/bioinformatics/btz780  0.6
2019 Driscoll MK, Welf ES, Jamieson AR, Dean KM, Isogai T, Fiolka R, Danuser G. Robust and automated detection of subcellular morphological motifs in 3D microscopy images. Nature Methods. PMID 31501548 DOI: 10.1038/s41592-019-0539-z  0.6
2019 Azoitei ML, Noh J, Marston DJ, Roudot P, Marshall CB, Daugird TA, Lisanza SL, Sandí MJ, Ikura M, Sondek J, Rottapel R, Hahn KM, Danuser G. Spatiotemporal dynamics of GEF-H1 activation controlled by microtubule- and Src-mediated pathways. The Journal of Cell Biology. PMID 31420453 DOI: 10.1083/jcb.201812073  0.6
2019 Murali VS, Chang BJ, Fiolka R, Danuser G, Cobanoglu MC, Welf ES. An image-based assay to quantify changes in proliferation and viability upon drug treatment in 3D microenvironments. Bmc Cancer. 19: 502. PMID 31138163 DOI: 10.1186/s12885-019-5694-1  0.6
2019 David AF, Roudot P, Legant WR, Betzig E, Danuser G, Gerlich DW. Augmin accumulation on long-lived microtubules drives amplification and kinetochore-directed growth. The Journal of Cell Biology. PMID 31113824 DOI: 10.1083/jcb.201805044  0.6
2019 Mohan AS, Dean KM, Isogai T, Kasitinon SY, Murali VS, Roudot P, Groisman A, Reed DK, Welf ES, Han SJ, Noh J, Danuser G. Enhanced Dendritic Actin Network Formation in Extended Lamellipodia Drives Proliferation in Growth-Challenged Rac1 Melanoma Cells. Developmental Cell. 49: 444-460.e9. PMID 31063759 DOI: 10.1016/j.devcel.2019.04.007  0.6
2019 Renkawitz J, Kopf A, Stopp J, de Vries I, Driscoll MK, Merrin J, Hauschild R, Welf ES, Danuser G, Fiolka R, Sixt M. Nuclear positioning facilitates amoeboid migration along the path of least resistance. Nature. PMID 30944468 DOI: 10.1038/s41586-019-1087-5  0.6
2018 Ma X, Dagliyan O, Hahn KM, Danuser G. Profiling cellular morphodynamics by spatiotemporal spectrum decomposition. Plos Computational Biology. 14: e1006321. PMID 30071020 DOI: 10.1371/journal.pcbi.1006321  0.48
2018 Isogai T, Danuser G. Discovery of functional interactions among actin regulators by analysis of image fluctuations in an unperturbed motile cell system. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 373. PMID 29632262 DOI: 10.1098/rstb.2017.0110  0.52
2017 Roudot P, Liya Ding, Jaqaman K, Kervrann C, Danuser G. Piecewise-Stationary Motion Modeling and Iterative Smoothing to Track Heterogeneous Particle Motions in Dense Environments. Ieee Transactions On Image Processing : a Publication of the Ieee Signal Processing Society. 26: 5395-5410. PMID 29388914 DOI: 10.1109/TIP.2017.2707803  0.6
2017 Isogai T, Park JS, Danuser G. Cell forces meet cell metabolism. Nature Cell Biology. 19: 591-593. PMID 28561051 DOI: 10.1038/ncb3542  0.52
2017 Costigliola N, Ding L, Burckhardt CJ, Han SJ, Gutierrez E, Mota A, Groisman A, Mitchison TJ, Danuser G. Vimentin fibers orient traction stress. Proceedings of the National Academy of Sciences of the United States of America. PMID 28465431 DOI: 10.1073/pnas.1614610114  0.32
2016 Gan Z, Ding L, Burckhardt CJ, Lowery J, Zaritsky A, Sitterley K, Mota A, Costigliola N, Starker CG, Voytas DF, Tytell J, Goldman RD, Danuser G. Vimentin Intermediate Filaments Template Microtubule Networks to Enhance Persistence in Cell Polarity and Directed Migration. Cell Systems. PMID 27667364 DOI: 10.1016/j.cels.2016.08.007  1
2016 Hodgson L, Spiering D, Sabouri-Ghomi M, Dagliyan O, DerMardirossian C, Danuser G, Hahn KM. FRET binding antenna reports spatiotemporal dynamics of GDI-Cdc42 GTPase interactions. Nature Chemical Biology. PMID 27501396 DOI: 10.1038/nchembio.2145  0.48
2016 Wang H, Vilela M, Winkler A, Tarnawski M, Schlichting I, Yumerefendi H, Kuhlman B, Liu R, Danuser G, Hahn KM. LOVTRAP: an optogenetic system for photoinduced protein dissociation. Nature Methods. PMID 27427858 DOI: 10.1038/nmeth.3926  0.48
2016 Welf ES, Driscoll MK, Dean KM, Schäfer C, Chu J, Davidson MW, Lin MZ, Danuser G, Fiolka R. Quantitative Multiscale Cell Imaging in Controlled 3D Microenvironments. Developmental Cell. 36: 462-75. PMID 26906741 DOI: 10.1016/j.devcel.2016.01.022  1
2015 Zaritsky A, Welf ES, Tseng YY, Angeles Rabadán M, Serra-Picamal X, Trepat X, Danuser G. Seeds of Locally Aligned Motion and Stress Coordinate a Collective Cell Migration. Biophysical Journal. 109: 2492-500. PMID 26682808 DOI: 10.1016/j.bpj.2015.11.001  1
2015 Driscoll MK, Danuser G. Quantifying Modes of 3D Cell Migration. Trends in Cell Biology. PMID 26603943 DOI: 10.1016/j.tcb.2015.09.010  1
2015 Lomakin AJ, Lee KC, Han SJ, Bui DA, Davidson M, Mogilner A, Danuser G. Competition for actin between two distinct F-actin networks defines a bistable switch for cell polarization. Nature Cell Biology. PMID 26414403 DOI: 10.1038/ncb3246  1
2015 Dean KM, Roudot P, Welf ES, Danuser G, Fiolka R. Deconvolution-free Subcellular Imaging with Axially Swept Light Sheet Microscopy. Biophysical Journal. 108: 2807-15. PMID 26083920 DOI: 10.1016/j.bpj.2015.05.013  0.6
2015 Han SJ, Oak Y, Groisman A, Danuser G. Traction microscopy to identify force modulation in subresolution adhesions. Nature Methods. 12: 653-6. PMID 26030446 DOI: 10.1038/nmeth.3430  1
2015 Mendoza MC, Vilela M, Juarez JE, Blenis J, Danuser G. ERK reinforces actin polymerization to power persistent edge protrusion during motility. Science Signaling. 8: ra47. PMID 25990957 DOI: 10.1126/scisignal.aaa8859  1
2015 Chittajallu DR, Florian S, Kohler RH, Iwamoto Y, Orth JD, Weissleder R, Danuser G, Mitchison TJ. In vivo cell-cycle profiling in xenograft tumors by quantitative intravital microscopy. Nature Methods. 12: 577-85. PMID 25867850 DOI: 10.1038/nmeth.3363  1
2015 Hookway C, Ding L, Davidson MW, Rappoport JZ, Danuser G, Gelfand VI. Microtubule-dependent transport and dynamics of vimentin intermediate filaments. Molecular Biology of the Cell. 26: 1675-86. PMID 25717187 DOI: 10.1091/mbc.E14-09-1398  1
2015 Elliott H, Fischer RS, Myers KA, Desai RA, Gao L, Chen CS, Adelstein RS, Waterman CM, Danuser G. Myosin II controls cellular branching morphogenesis and migration in three dimensions by minimizing cell-surface curvature. Nature Cell Biology. 17: 137-47. PMID 25621949 DOI: 10.1038/ncb3092  1
2015 Kwon M, Bagonis M, Danuser G, Pellman D. Direct Microtubule-Binding by Myosin-10 Orients Centrosomes toward Retraction Fibers and Subcortical Actin Clouds Developmental Cell. 34: 323-337. DOI: 10.1016/j.devcel.2015.06.013  1
2015 Lee K, Elliott HL, Oak Y, Zee CT, Groisman A, Tytell JD, Danuser G. Functional Hierarchy of Redundant Actin Assembly Factors Revealed by Fine-Grained Registration of Intrinsic Image Fluctuations Cell Systems. 1: 37-50. DOI: 10.1016/j.cels.2015.07.001  1
2015 Dean KM, Roudot P, Welf ES, Danuser G, Fiolka R. Deconvolution-free Subcellular Imaging with Axially Swept Light Sheet Microscopy Biophysical Journal. 108: 2807-2815. DOI: 10.1016/j.bpj.2015.05.013  1
2014 Welf ES, Danuser G. Using fluctuation analysis to establish causal relations between cellular events without experimental perturbation. Biophysical Journal. 107: 2492-8. PMID 25468328 DOI: 10.1016/j.bpj.2014.10.032  1
2014 Martin K, Vilela M, Jeon NL, Danuser G, Pertz O. A growth factor-induced, spatially organizing cytoskeletal module enables rapid and persistent fibroblast migration. Developmental Cell. 30: 701-16. PMID 25268172 DOI: 10.1016/j.devcel.2014.07.022  1
2014 Mettlen M, Danuser G. Imaging and modeling the dynamics of clathrin-mediated endocytosis. Cold Spring Harbor Perspectives in Biology. 6: a017038. PMID 25167858 DOI: 10.1101/cshperspect.a017038  1
2014 Yi JJ, Wang H, Vilela M, Danuser G, Hahn KM. Manipulation of endogenous kinase activity in living cells using photoswitchable inhibitory peptides. Acs Synthetic Biology. 3: 788-95. PMID 24905630 DOI: 10.1021/sb5001356  1
2014 Cai D, Chen SC, Prasad M, He L, Wang X, Choesmel-Cadamuro V, Sawyer JK, Danuser G, Montell DJ. Mechanical feedback through E-cadherin promotes direction sensing during collective cell migration. Cell. 157: 1146-59. PMID 24855950 DOI: 10.1016/j.cell.2014.03.045  1
2014 Danuser G. Reply to "Acquisition frame rate affects microtubule plus-end tracking analysis". Nature Methods. 11: 220. PMID 24577269 DOI: 10.1038/nmeth.2860  1
2014 Smole Z, Thoma CR, Applegate KT, Duda M, Gutbrodt KL, Danuser G, Krek W. Tumor suppressor NF2/Merlin is a microtubule stabilizer. Cancer Research. 74: 353-62. PMID 24282279 DOI: 10.1158/0008-5472.CAN-13-1334  1
2013 Lowery LA, Stout A, Faris AE, Ding L, Baird MA, Davidson MW, Danuser G, Van Vactor D. Growth cone-specific functions of XMAP215 in restricting microtubule dynamics and promoting axonal outgrowth. Neural Development. 8: 22. PMID 24289819 DOI: 10.1186/1749-8104-8-22  1
2013 Zawistowski JS, Sabouri-Ghomi M, Danuser G, Hahn KM, Hodgson L. A RhoC biosensor reveals differences in the activation kinetics of RhoA and RhoC in migrating cells. Plos One. 8: e79877. PMID 24224016 DOI: 10.1371/journal.pone.0079877  1
2013 Marco E, Dorn JF, Hsu PH, Jaqaman K, Sorger PK, Danuser G. S. cerevisiae chromosomes biorient via gradual resolution of syntely between S phase and anaphase. Cell. 154: 1127-39. PMID 23993100 DOI: 10.1016/j.cell.2013.08.008  1
2013 Danuser G, Allard J, Mogilner A. Mathematical modeling of eukaryotic cell migration: insights beyond experiments. Annual Review of Cell and Developmental Biology. 29: 501-28. PMID 23909278 DOI: 10.1146/annurev-cellbio-101512-122308  1
2013 Aguet F, Antonescu CN, Mettlen M, Schmid SL, Danuser G. Advances in analysis of low signal-to-noise images link dynamin and AP2 to the functions of an endocytic checkpoint. Developmental Cell. 26: 279-91. PMID 23891661 DOI: 10.1016/j.devcel.2013.06.019  1
2013 Long JB, Bagonis M, Lowery LA, Lee H, Danuser G, Van Vactor D. Multiparametric analysis of CLASP-interacting protein functions during interphase microtubule dynamics. Molecular and Cellular Biology. 33: 1528-45. PMID 23382075 DOI: 10.1128/MCB.01442-12  1
2013 Vilela M, Halidi N, Besson S, Elliott H, Hahn K, Tytell J, Danuser G. Fluctuation analysis of activity biosensor images for the study of information flow in signaling pathways. Methods in Enzymology. 519: 253-76. PMID 23280114 DOI: 10.1016/B978-0-12-405539-1.00009-9  1
2012 Ng MR, Besser A, Danuser G, Brugge JS. Substrate stiffness regulates cadherin-dependent collective migration through myosin-II contractility. The Journal of Cell Biology. 199: 545-63. PMID 23091067 DOI: 10.1083/jcb.201207148  1
2012 Mendoza MC, Besson S, Danuser G. Quantitative fluorescent speckle microscopy (QFSM) to measure actin dynamics. Current Protocols in Cytometry / Editorial Board, J. Paul Robinson, Managing Editor ... [Et Al.]. Unit2.18. PMID 23042526 DOI: 10.1002/0471142956.cy0218s62  1
2012 Nishimura Y, Applegate K, Davidson MW, Danuser G, Waterman CM. Automated screening of microtubule growth dynamics identifies MARK2 as a regulator of leading edge microtubules downstream of Rac1 in migrating cells. Plos One. 7: e41413. PMID 22848487 DOI: 10.1371/journal.pone.0041413  1
2012 Loerke D, le Duc Q, Blonk I, Kerstens A, Spanjaard E, Machacek M, Danuser G, de Rooij J. Quantitative imaging of epithelial cell scattering identifies specific inhibitors of cell motility and cell-cell dissociation. Science Signaling. 5: rs5. PMID 22763340 DOI: 10.1126/scisignal.2002677  1
2012 Reis GF, Yang G, Szpankowski L, Weaver C, Shah SB, Robinson JT, Hays TS, Danuser G, Goldstein LS. Molecular motor function in axonal transport in vivo probed by genetic and computational analysis in Drosophila. Molecular Biology of the Cell. 23: 1700-14. PMID 22398725 DOI: 10.1091/mbc.E11-11-0938  1
2012 Swedlow J, Danuser G. Scale integration: the structure and dynamics of macromolecular assemblies, cells and tissues. Current Opinion in Cell Biology. 24: 1-3. PMID 22342264 DOI: 10.1016/j.ceb.2012.01.012  1
2012 Dittrich C, Burckhardt CJ, Danuser G. Delivery of membrane impermeable cargo into CHO cells by peptide nanoparticles targeted by a protein corona. Biomaterials. 33: 2746-53. PMID 22226586 DOI: 10.1016/j.biomaterials.2011.12.016  1
2011 Iwanicki MP, Davidowitz RA, Ng MR, Besser A, Muranen T, Merritt M, Danuser G, Ince TA, Ince T, Brugge JS. Ovarian cancer spheroids use myosin-generated force to clear the mesothelium. Cancer Discovery. 1: 144-57. PMID 22303516 DOI: 10.1158/2159-8274.CD-11-0010  1
2011 Danuser G. Computer vision in cell biology. Cell. 147: 973-8. PMID 22118455 DOI: 10.1016/j.cell.2011.11.001  1
2011 Welch CM, Elliott H, Danuser G, Hahn KM. Imaging the coordination of multiple signalling activities in living cells. Nature Reviews. Molecular Cell Biology. 12: 749-56. PMID 22016058 DOI: 10.1038/nrm3212  1
2011 Gutierrez E, Tkachenko E, Besser A, Sundd P, Ley K, Danuser G, Ginsberg MH, Groisman A. High refractive index silicone gels for simultaneous total internal reflection fluorescence and traction force microscopy of adherent cells. Plos One. 6: e23807. PMID 21961031 DOI: 10.1371/journal.pone.0023807  1
2011 Vilela M, Danuser G. What's wrong with correlative experiments? Nature Cell Biology. 13: 1011. PMID 21892139 DOI: 10.1038/ncb2325  1
2011 Nunez D, Antonescu C, Mettlen M, Liu A, Schmid SL, Loerke D, Danuser G. Hotspots organize clathrin-mediated endocytosis by efficient recruitment and retention of nucleating resources. Traffic (Copenhagen, Denmark). 12: 1868-78. PMID 21883765 DOI: 10.1111/j.1600-0854.2011.01273.x  1
2011 Jaqaman K, Kuwata H, Touret N, Collins R, Trimble WS, Danuser G, Grinstein S. Cytoskeletal control of CD36 diffusion promotes its receptor and signaling function. Cell. 146: 593-606. PMID 21854984 DOI: 10.1016/j.cell.2011.06.049  1
2011 Applegate KT, Besson S, Matov A, Bagonis MH, Jaqaman K, Danuser G. plusTipTracker: Quantitative image analysis software for the measurement of microtubule dynamics. Journal of Structural Biology. 176: 168-84. PMID 21821130 DOI: 10.1016/j.jsb.2011.07.009  1
2011 Matov A, Edvall MM, Yang G, Danuser G. Optimal-Flow Minimum-Cost Correspondence Assignment in Particle Flow Tracking. Computer Vision and Image Understanding : Cviu. 115: 531-540. PMID 21720496 DOI: 10.1016/j.cviu.2011.01.001  1
2011 Delorme-Walker VD, Peterson JR, Chernoff J, Waterman CM, Danuser G, DerMardirossian C, Bokoch GM. Pak1 regulates focal adhesion strength, myosin IIA distribution, and actin dynamics to optimize cell migration. The Journal of Cell Biology. 193: 1289-303. PMID 21708980 DOI: 10.1083/jcb.201010059  1
2011 Antonescu CN, Aguet F, Danuser G, Schmid SL. Phosphatidylinositol-(4,5)-bisphosphate regulates clathrin-coated pit initiation, stabilization, and size. Molecular Biology of the Cell. 22: 2588-600. PMID 21613550 DOI: 10.1091/mbc.E11-04-0362  1
2011 Tkachenko E, Sabouri-Ghomi M, Pertz O, Kim C, Gutierrez E, Machacek M, Groisman A, Danuser G, Ginsberg MH. Protein kinase A governs a RhoA-RhoGDI protrusion-retraction pacemaker in migrating cells. Nature Cell Biology. 13: 660-7. PMID 21572420 DOI: 10.1038/ncb2231  1
2011 Loerke D, Mettlen M, Schmid SL, Danuser G. Measuring the hierarchy of molecular events during clathrin-mediated endocytosis. Traffic (Copenhagen, Denmark). 12: 815-25. PMID 21447041 DOI: 10.1111/j.1600-0854.2011.01197.x  1
2011 Mendoza MC, Er EE, Zhang W, Ballif BA, Elliott HL, Danuser G, Blenis J. ERK-MAPK drives lamellipodia protrusion by activating the WAVE2 regulatory complex. Molecular Cell. 41: 661-71. PMID 21419341 DOI: 10.1016/j.molcel.2011.02.031  1
2011 Myers KA, Applegate KT, Danuser G, Fischer RS, Waterman CM. Distinct ECM mechanosensing pathways regulate microtubule dynamics to control endothelial cell branching morphogenesis. The Journal of Cell Biology. 192: 321-34. PMID 21263030 DOI: 10.1083/jcb.201006009  1
2010 Liu AP, Aguet F, Danuser G, Schmid SL. Local clustering of transferrin receptors promotes clathrin-coated pit initiation. The Journal of Cell Biology. 191: 1381-93. PMID 21187331 DOI: 10.1083/jcb.201008117  1
2010 Thoma CR, Matov A, Gutbrodt KL, Hoerner CR, Smole Z, Krek W, Danuser G. Quantitative image analysis identifies pVHL as a key regulator of microtubule dynamic instability. The Journal of Cell Biology. 190: 991-1003. PMID 20855504 DOI: 10.1083/jcb.201006059  1
2010 Matov A, Applegate K, Kumar P, Thoma C, Krek W, Danuser G, Wittmann T. Analysis of microtubule dynamic instability using a plus-end growth marker. Nature Methods. 7: 761-8. PMID 20729842 DOI: 10.1038/nmeth.1493  1
2010 Antonescu CN, Danuser G, Schmid SL. Phosphatidic acid plays a regulatory role in clathrin-mediated endocytosis. Molecular Biology of the Cell. 21: 2944-52. PMID 20573978 DOI: 10.1091/mbc.E10-05-0421  1
2010 Wilson CA, Tsuchida MA, Allen GM, Barnhart EL, Applegate KT, Yam PT, Ji L, Keren K, Danuser G, Theriot JA. Myosin II contributes to cell-scale actin network treadmilling through network disassembly. Nature. 465: 373-7. PMID 20485438 DOI: 10.1038/nature08994  1
2010 Enculescu M, Sabouri-Ghomi M, Danuser G, Falcke M. Modeling of protrusion phenotypes driven by the actin-membrane interaction. Biophysical Journal. 98: 1571-81. PMID 20409477 DOI: 10.1016/j.bpj.2009.12.4311  1
2010 Lim JI, Sabouri-Ghomi M, Machacek M, Waterman CM, Danuser G. Protrusion and actin assembly are coupled to the organization of lamellar contractile structures. Experimental Cell Research. 316: 2027-41. PMID 20406634 DOI: 10.1016/j.yexcr.2010.04.011  1
2010 Mettlen M, Loerke D, Yarar D, Danuser G, Schmid SL. Cargo- and adaptor-specific mechanisms regulate clathrin-mediated endocytosis. The Journal of Cell Biology. 188: 919-33. PMID 20231386 DOI: 10.1083/jcb.200908078  1
2010 Jaqaman K, King EM, Amaro AC, Winter JR, Dorn JF, Elliott HL, McHedlishvili N, McClelland SE, Porter IM, Posch M, Toso A, Danuser G, McAinsh AD, Meraldi P, Swedlow JR. Kinetochore alignment within the metaphase plate is regulated by centromere stiffness and microtubule depolymerases. The Journal of Cell Biology. 188: 665-79. PMID 20212316 DOI: 10.1083/jcb.200909005  1
2010 Gatlin JC, Matov A, Danuser G, Mitchison TJ, Salmon ED. Directly probing the mechanical properties of the spindle and its matrix. The Journal of Cell Biology. 188: 481-9. PMID 20176922 DOI: 10.1083/jcb.200907110  1
2009 Jaqaman K, Danuser G. Computational image analysis of cellular dynamics: a case study based on particle tracking. Cold Spring Harbor Protocols. 2009: pdb.top65. PMID 20150102 DOI: 10.1101/pdb.top65  1
2009 Houghtaling BR, Yang G, Matov A, Danuser G, Kapoor TM. Op18 reveals the contribution of nonkinetochore microtubules to the dynamic organization of the vertebrate meiotic spindle. Proceedings of the National Academy of Sciences of the United States of America. 106: 15338-43. PMID 19706424 DOI: 10.1073/pnas.0902317106  1
2009 Machacek M, Hodgson L, Welch C, Elliott H, Pertz O, Nalbant P, Abell A, Johnson GL, Hahn KM, Danuser G. Coordination of Rho GTPase activities during cell protrusion. Nature. 461: 99-103. PMID 19693013 DOI: 10.1038/nature08242  1
2009 Liu AP, Loerke D, Schmid SL, Danuser G. Global and local regulation of clathrin-coated pit dynamics detected on patterned substrates. Biophysical Journal. 97: 1038-47. PMID 19686651 DOI: 10.1016/j.bpj.2009.06.003  1
2009 Lim J, Danuser G. Live cell imaging of F-actin dynamics via Fluorescent Speckle Microscopy (FSM). Journal of Visualized Experiments : Jove. PMID 19684563 DOI: 10.3791/1325  1
2009 Danuser G. Testing the lamella hypothesis: the next steps on the agenda. Journal of Cell Science. 122: 1959-62. PMID 19494124 DOI: 10.1242/jcs.054379  1
2009 Mettlen M, Stoeber M, Loerke D, Antonescu CN, Danuser G, Schmid SL. Endocytic accessory proteins are functionally distinguished by their differential effects on the maturation of clathrin-coated pits. Molecular Biology of the Cell. 20: 3251-60. PMID 19458185 DOI: 10.1091/mbc.E09-03-0256  1
2009 Loerke D, Mettlen M, Yarar D, Jaqaman K, Jaqaman H, Danuser G, Schmid SL. Cargo and dynamin regulate clathrin-coated pit maturation. Plos Biology. 7: e57. PMID 19296720 DOI: 10.1371/journal.pbio.1000057  1
2009 Kumar P, Lyle KS, Gierke S, Matov A, Danuser G, Wittmann T. GSK3beta phosphorylation modulates CLASP-microtubule association and lamella microtubule attachment. The Journal of Cell Biology. 184: 895-908. PMID 19289791 DOI: 10.1083/jcb.200901042  1
2009 Gatlin JC, Matov A, Groen AC, Needleman DJ, Maresca TJ, Danuser G, Mitchison TJ, Salmon ED. Spindle fusion requires dynein-mediated sliding of oppositely oriented microtubules. Current Biology : Cb. 19: 287-96. PMID 19230671 DOI: 10.1016/j.cub.2009.01.055  1
2008 Gardel ML, Sabass B, Ji L, Danuser G, Schwarz US, Waterman CM. Traction stress in focal adhesions correlates biphasically with actin retrograde flow speed. The Journal of Cell Biology. 183: 999-1005. PMID 19075110 DOI: 10.1083/jcb.200810060  1
2008 Ji L, Lim J, Danuser G. Fluctuations of intracellular forces during cell protrusion. Nature Cell Biology. 10: 1393-400. PMID 19011623 DOI: 10.1038/ncb1797  1
2008 Yang G, Cameron LA, Maddox PS, Salmon ED, Danuser G. Regional variation of microtubule flux reveals microtubule organization in the metaphase meiotic spindle. The Journal of Cell Biology. 182: 631-9. PMID 18710922 DOI: 10.1083/jcb.200801105  1
2008 Jaqaman K, Loerke D, Mettlen M, Kuwata H, Grinstein S, Schmid SL, Danuser G. Robust single-particle tracking in live-cell time-lapse sequences. Nature Methods. 5: 695-702. PMID 18641657 DOI: 10.1038/nmeth.1237  1
2008 Burnette DT, Ji L, Schaefer AW, Medeiros NA, Danuser G, Forscher P. Myosin II activity facilitates microtubule bundling in the neuronal growth cone neck. Developmental Cell. 15: 163-9. PMID 18606149 DOI: 10.1016/j.devcel.2008.05.016  1
2008 Schaefer AW, Schoonderwoert VT, Ji L, Mederios N, Danuser G, Forscher P. Coordination of actin filament and microtubule dynamics during neurite outgrowth. Developmental Cell. 15: 146-62. PMID 18606148 DOI: 10.1016/j.devcel.2008.05.003  1
2008 Sabouri-Ghomi M, Wu Y, Hahn K, Danuser G. Visualizing and quantifying adhesive signals. Current Opinion in Cell Biology. 20: 541-50. PMID 18586481 DOI: 10.1016/j.ceb.2008.05.004  1
2008 Dorn JF, Danuser G, Yang G. Computational processing and analysis of dynamic fluorescence image data. Methods in Cell Biology. 85: 497-538. PMID 18155477 DOI: 10.1016/S0091-679X(08)85022-4  1
2008 Chen SC, Danuser G. Quantitative analysis of border cell migration Conference Record - Asilomar Conference On Signals, Systems and Computers. 56-60. DOI: 10.1109/ACSSC.2008.5074360  1
2007 Burnette DT, Schaefer AW, Ji L, Danuser G, Forscher P. Filopodial actin bundles are not necessary for microtubule advance into the peripheral domain of Aplysia neuronal growth cones. Nature Cell Biology. 9: 1360-9. PMID 18026092 DOI: 10.1038/ncb1655  1
2007 Delorme V, Machacek M, DerMardirossian C, Anderson KL, Wittmann T, Hanein D, Waterman-Storer C, Danuser G, Bokoch GM. Cofilin activity downstream of Pak1 regulates cell protrusion efficiency by organizing lamellipodium and lamella actin networks. Developmental Cell. 13: 646-62. PMID 17981134 DOI: 10.1016/j.devcel.2007.08.011  1
2007 Yang G, Houghtaling BR, Gaetz J, Liu JZ, Danuser G, Kapoor TM. Architectural dynamics of the meiotic spindle revealed by single-fluorophore imaging. Nature Cell Biology. 9: 1233-42. PMID 17934454 DOI: 10.1038/ncb1643  1
2007 Yam PT, Wilson CA, Ji L, Hebert B, Barnhart EL, Dye NA, Wiseman PW, Danuser G, Theriot JA. Actin-myosin network reorganization breaks symmetry at the cell rear to spontaneously initiate polarized cell motility. The Journal of Cell Biology. 178: 1207-21. PMID 17893245 DOI: 10.1083/jcb.200706012  1
2007 Csucs G, Quirin K, Danuser G. Locomotion of fish epidermal keratocytes on spatially selective adhesion patterns. Cell Motility and the Cytoskeleton. 64: 856-67. PMID 17712861 DOI: 10.1002/cm.20230  1
2007 Ji L, Loerke D, Gardel M, Danuser G. Probing intracellular force distributions by high-resolution live cell imaging and inverse dynamics. Methods in Cell Biology. 83: 199-235. PMID 17613310 DOI: 10.1016/S0091-679X(07)83009-3  1
2007 Soutoglou E, Dorn JF, Sengupta K, Jasin M, Nussenzweig A, Ried T, Danuser G, Misteli T. Positional stability of single double-strand breaks in mammalian cells. Nature Cell Biology. 9: 675-82. PMID 17486118 DOI: 10.1038/ncb1591  1
2007 Jaqaman K, Dorn JF, Marco E, Sorger PK, Danuser G. Phenotypic clustering of yeast mutants based on kinetochore microtubule dynamics. Bioinformatics (Oxford, England). 23: 1666-73. PMID 17483508 DOI: 10.1093/bioinformatics/btm230  1
2007 Hu K, Ji L, Applegate KT, Danuser G, Waterman-Storer CM. Differential transmission of actin motion within focal adhesions. Science (New York, N.Y.). 315: 111-5. PMID 17204653 DOI: 10.1126/science.1135085  1
2007 Shah SB, Yang G, Danuser G, Goldstein LSB. Axonal transport: Imaging and modeling of a neuronal process Lecture Notes in Physics. 711: 65-84. DOI: 10.1007/3-540-49522-3_4  1
2006 Jaqaman K, Danuser G. Linking data to models: data regression. Nature Reviews. Molecular Cell Biology. 7: 813-9. PMID 17006434 DOI: 10.1038/nrm2030  1
2006 Jaqaman K, Dorn JF, Jelson GS, Tytell JD, Sorger PK, Danuser G. Comparative autoregressive moving average analysis of kinetochore microtubule dynamics in yeast. Biophysical Journal. 91: 2312-25. PMID 16940476 DOI: 10.1529/biophysj.106.080333  1
2006 Danuser G, Waterman-Storer CM. Quantitative fluorescent speckle microscopy of cytoskeleton dynamics. Annual Review of Biophysics and Biomolecular Structure. 35: 361-87. PMID 16689641 DOI: 10.1146/annurev.biophys.35.040405.102114  1
2006 Cameron LA, Yang G, Cimini D, Canman JC, Kisurina-Evgenieva O, Khodjakov A, Danuser G, Salmon ED. Kinesin 5-independent poleward flux of kinetochore microtubules in PtK1 cells. The Journal of Cell Biology. 173: 173-9. PMID 16636143 DOI: 10.1083/jcb.200601075  1
2006 Machacek M, Danuser G. Morphodynamic profiling of protrusion phenotypes. Biophysical Journal. 90: 1439-52. PMID 16326902 DOI: 10.1529/biophysj.105.070383  1
2006 Meijering E, Smal I, Danuser G. Tracking in molecular bioimaging Ieee Signal Processing Magazine. 23: 46-53. DOI: 10.1109/MSP.2006.1628877  1
2006 Danuser G. Computer vision for systems biology 2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 2006: 241-244.  1
2005 Ji L, Danuser G. Tracking quasi-stationary flow of weak fluorescent signals by adaptive multi-frame correlation. Journal of Microscopy. 220: 150-67. PMID 16363999 DOI: 10.1111/j.1365-2818.2005.01522.x  1
2005 Danuser G. Coupling the dynamics of two actin networks--new views on the mechanics of cell protrusion. Biochemical Society Transactions. 33: 1250-3. PMID 16246090 DOI: 10.1042/BST20051250  1
2005 de Rooij J, Kerstens A, Danuser G, Schwartz MA, Waterman-Storer CM. Integrin-dependent actomyosin contraction regulates epithelial cell scattering. The Journal of Cell Biology. 171: 153-64. PMID 16216928 DOI: 10.1083/jcb.200506152  1
2005 Dorn JF, Jaqaman K, Rines DR, Jelson GS, Sorger PK, Danuser G. Yeast kinetochore microtubule dynamics analyzed by high-resolution three-dimensional microscopy. Biophysical Journal. 89: 2835-54. PMID 16192284 DOI: 10.1529/biophysj.104.058461  1
2005 Ponti A, Matov A, Adams M, Gupton S, Waterman-Storer CM, Danuser G. Periodic patterns of actin turnover in lamellipodia and lamellae of migrating epithelial cells analyzed by quantitative Fluorescent Speckle Microscopy. Biophysical Journal. 89: 3456-69. PMID 16100274 DOI: 10.1529/biophysj.104.058701  1
2005 Gupton SL, Anderson KL, Kole TP, Fischer RS, Ponti A, Hitchcock-DeGregori SE, Danuser G, Fowler VM, Wirtz D, Hanein D, Waterman-Storer CM. Cell migration without a lamellipodium: translation of actin dynamics into cell movement mediated by tropomyosin. The Journal of Cell Biology. 168: 619-31. PMID 15716379 DOI: 10.1083/jcb.200406063  1
2005 Vallotton P, Danuser G, Bohnet S, Meister JJ, Verkhovsky AB. Tracking retrograde flow in keratocytes: news from the front. Molecular Biology of the Cell. 16: 1223-31. PMID 15635099 DOI: 10.1091/mbc.E04-07-0615  1
2005 Murphy RF, Meijering E, Danuser G. Guest editorial Ieee Transactions On Image Processing. 14: 1233-1236. DOI: 10.1109/TIP.2005.855701  1
2005 Lussi JW, Tang C, Kuenzi PA, Staufer U, Csucs G, Vörös J, Danuser G, Hubbell JA, Textor M. Selective molecular assembly patterning at the nanoscale: A novel platform for producing protein patterns by electron-beam lithography on SiO 2/indium tin oxide-coated glass substrates Nanotechnology. 16: 1781-1786. DOI: 10.1088/0957-4484/16/9/062  1
2005 Künzi PA, Lussi J, Aeschimann L, Danuser G, Textor M, De Rooij NF, Staufer U. Nanofabrication of protein-patterned substrates for future cell adhesion experiments Microelectronic Engineering. 78: 582-586. DOI: 10.1016/j.mee.2004.12.073  1
2004 Adams MC, Matov A, Yarar D, Gupton SL, Danuser G, Waterman-Storer CM. Signal analysis of total internal reflection fluorescent speckle microscopy (TIR-FSM) and wide-field epi-fluorescence FSM of the actin cytoskeleton and focal adhesions in living cells. Journal of Microscopy. 216: 138-52. PMID 15516225 DOI: 10.1111/j.0022-2720.2004.01408.x  1
2004 Ponti A, Machacek M, Gupton SL, Waterman-Storer CM, Danuser G. Two distinct actin networks drive the protrusion of migrating cells. Science (New York, N.Y.). 305: 1782-6. PMID 15375270 DOI: 10.1126/science.1100533  1
2004 Vallotton P, Gupton SL, Waterman-Storer CM, Danuser G. Simultaneous mapping of filamentous actin flow and turnover in migrating cells by quantitative fluorescent speckle microscopy. Proceedings of the National Academy of Sciences of the United States of America. 101: 9660-5. PMID 15210979 DOI: 10.1073/pnas.0300552101  1
2004 Danuser G, Mazza E. Observing deformations of 20 nanometer with a low-numerical-aperture light microscope Proceedings of Spie - the International Society For Optical Engineering. 2782: 180-191. DOI: 10.1117/12.250744  1
2004 Mazza E, Dual J, Musil CR, Danuser G, Vetterli M. Measurement of the strain field in a micrometer-sized region at a notch tip Proceedings of Spie - the International Society For Optical Engineering. 2782: 160-168. DOI: 10.1117/12.250741  1
2004 Waterman-Storer CM, Ponti A, Gupton SL, Littlefield R, Adams M, Danuser G. Quantitative fluorescent speckle microscopy of the actin cytoskeleton in migrating cells Microscopy and Microanalysis. 10: 1234-1235. DOI: 10.1017/S1431927604886811  1
2004 Danuser G. Super-resolution tracking of weak fluorescent markers in 3D: Application in dissecting the mechanics of chromosome segregation using fluorescence imaging and molecular genetics in yeast 2004 2nd Ieee International Symposium On Biomedical Imaging: Macro to Nano. 1: 61-64.  1
2003 Thomann D, Dorn J, Sorger PK, Danuser G. Automatic fluorescent tag localization II: Improvement in super-resolution by relative tracking. Journal of Microscopy. 211: 230-48. PMID 12950472  1
2003 Danuser G, Waterman-Storer CM. Quantitative fluorescent speckle microscopy: where it came from and where it is going. Journal of Microscopy. 211: 191-207. PMID 12950468  1
2003 Vallotton P, Ponti A, Waterman-Storer CM, Salmon ED, Danuser G. Recovery, visualization, and analysis of actin and tubulin polymer flow in live cells: a fluorescent speckle microscopy study. Biophysical Journal. 85: 1289-306. PMID 12885672 DOI: 10.1016/S0006-3495(03)74564-0  1
2003 Müller M, Vörös J, Csúcs G, Walter E, Danuser G, Merkle HP, Spencer ND, Textor M. Surface modification of PLGA microspheres. Journal of Biomedical Materials Research. Part A. 66: 55-61. PMID 12833431 DOI: 10.1002/jbm.a.10502  1
2003 Berney C, Danuser G. FRET or no FRET: a quantitative comparison. Biophysical Journal. 84: 3992-4010. PMID 12770904 DOI: 10.1016/S0006-3495(03)75126-1  1
2003 Ponti A, Vallotton P, Salmon WC, Waterman-Storer CM, Danuser G. Computational analysis of F-actin turnover in cortical actin meshworks using fluorescent speckle microscopy. Biophysical Journal. 84: 3336-52. PMID 12719263 DOI: 10.1016/S0006-3495(03)70058-7  1
2003 Csucs G, Michel R, Lussi JW, Textor M, Danuser G. Microcontact printing of novel co-polymers in combination with proteins for cell-biological applications. Biomaterials. 24: 1713-20. PMID 12593952 DOI: 10.1016/S0142-9612(02)00568-9  1
2003 Scotchford CA, Ball M, Winkelmann M, Vörös J, Csucs C, Brunette DM, Danuser G, Textor M. Chemically patterned, metal-oxide-based surfaces produced by photolithographic techniques for studying protein- and cell-interactions. II: Protein adsorption and early cell interactions Biomaterials. 24: 1147-1158. PMID 12527255 DOI: 10.1016/S0142-9612(02)00488-X  1
2002 Waterman-Storer CM, Danuser G. New directions for fluorescent speckle microscopy. Current Biology : Cb. 12: R633-40. PMID 12372272 DOI: 10.1016/S0960-9822(02)01139-9  1
2002 Thomann D, Rines DR, Sorger PK, Danuser G. Automatic fluorescent tag detection in 3D with super-resolution: application to the analysis of chromosome movement. Journal of Microscopy. 208: 49-64. PMID 12366597 DOI: 10.1046/j.1365-2818.2002.01066.x  1
2002 Denoth J, Stüssi E, Csucs G, Danuser G. Single muscle fiber contraction is dictated by inter-sarcomere dynamics. Journal of Theoretical Biology. 216: 101-22. PMID 12076131 DOI: 10.1006/jtbi.2001.2519  1
2002 Michel R, Reviakine I, Sutherland D, Fokas C, Csucs G, Danuser G, Spencer ND, Textor M. A novel approach to produce biologically relevant chemical patterns at the nanometer scale: Selective molecular assembly patterning combined with colloidal lithography Langmuir. 18: 8580-8586. DOI: 10.1021/la0258244  1
2002 Michel R, Lussi JW, Csucs G, Reviakine I, Danuser G, Ketterer B, Hubbell JA, Textor M, Spencer ND. Selective molecular assembly patterning: A new approach to micro- and nanochemical patterning of surfaces for biological applications Langmuir. 18: 3281-3287. DOI: 10.1021/la011715y  1
2001 Danuser G. Super-resolution microscopy using normal flow decoding and geometric constraints Journal of Microscopy. 204: 136-149. PMID 11737546 DOI: 10.1046/j.1365-2818.2001.00950.x  1
2001 Thomann D, Stüssi E, Danuser G. One-step calibration of specimen induced focal shifts and spherical aberration for quantitative 3D microscopy: Approach and first results Proceedings of Spie - the International Society For Optical Engineering. 4261: 69-80. DOI: 10.1117/12.424521  1
2001 Michel R, Lussi JW, Csucs G, Goessl A, Reviakine I, Hubbell JA, Danuser G, Textor M, Spencer ND. Selective molecular assembly patterning - A new approach to micro- and nanochemical patterning of surfaces for biological applications European Cells and Materials. 2: 13.  1
2001 Danuser G, Ponti A, Waterman-Storer C. Quantitative fluorescent speckle microscopy of lamellipodial actin meshwork activity European Cells and Materials. 2: 24.  1
2001 Maddox P, Danuser G. Fluorescent speckle microscopy - A tutorial European Cells and Materials. 1: 16.  1
2000 Danuser G, Oldenbourg R. Probing f-actin flow by tracking shape fluctuations of radial bundles in lamellipodia of motile cells Biophysical Journal. 79: 191-201. PMID 10866947  1
2000 Danuser G, Tran PT, Salmon ED. Tracking differential interference contrast diffraction line images with nanometre sensitivity. Journal of Microscopy. 198: 34-53. PMID 10781207 DOI: 10.1046/j.1365-2818.2000.00678.x  1
2000 Oldenbourg R, Katoh K, Danuser G. Mechanism of lateral movement of filopodia and radial actin bundles across neuronal growth cones Biophysical Journal. 78: 1176-1182. PMID 10692307  1
2000 Lucchinetti E, Thomann D, Danuser G. Micromechanical testing of bone trabeculae - potentials and limitations Journal of Materials Science. 35: 6057-6064. DOI: 10.1023/A:1026748913553  1
1999 Messerli MA, Danuser G, Robinson KR. Pulsatile influxes of H+, K+ and Ca2+ lag growth pulses of Lilium longiflorum pollen tubes. Journal of Cell Science. 112: 1497-509. PMID 10212144  1
1999 Danuser G. Photogrammetric calibration of a stereo light microscope Journal of Microscopy. 193: 62-83. DOI: 10.1046/j.1365-2818.1999.00425.x  1
1998 Danuser G, Stricker M. Parametric model fitting: from inlier characterization to outlier detection Ieee Transactions On Pattern Analysis and Machine Intelligence. 20: 263-280. DOI: 10.1109/34.667884  1
1996 Mazza E, Danuser G, Dual J. Light optical deformation measurements in microbars with nanometer resolution Microsystem Technologies. 2: 83-91. DOI: 10.1007/BF02739536  1
1995 Kahle HG, Müller MV, Geiger A, Danuser G, Mueller S, Veis G, Billiris H, Paradissis D. The strain field in northwestern Greece and the Ionian Islands: results inferred from GPS measurements Tectonophysics. 249: 41-52. DOI: 10.1016/0040-1951(95)00042-L  1
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