Herbert Levine - Publications

Affiliations: 
2012 Physics University of California, San Diego, La Jolla, CA 
 2012- Bioengineering Rice University, Houston, TX 
Area:
dynamics of biological systems
Website:
http://bioengineering.rice.edu/faculty/Herbert_Levine.aspx

206 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Nihan Kilinc A, Sugiyama N, Reddy Kalathur RK, Antoniadis H, Birogul H, Ishay-Ronen D, George JT, Levine H, Kumar Jolly M, Christofori G. Histone deacetylases, Mbd3/NuRD, and Tet2 hydroxylase are crucial regulators of epithelial-mesenchymal plasticity and tumor metastasis. Oncogene. PMID 31666683 DOI: 10.1038/s41388-019-1081-2  0.44
2019 Thangavel H, Angelis C, Vasaikar S, Bhat R, Jolly MK, Nagi C, Creighton CJ, Chen F, Dobrolecki LE, George JT, Kumar T, Abdulkareem NM, Mao S, Nardone A, Rimawi M, ... ... Levine H, et al. A CTC-Cluster-Specific Signature Derived from OMICS Analysis of Patient-Derived Xenograft Tumors Predicts Outcomes in Basal-Like Breast Cancer. Journal of Clinical Medicine. 8. PMID 31652963 DOI: 10.3390/jcm8111772  0.84
2019 Yang Y, Jolly MK, Levine H. Computational Modeling of Collective Cell Migration: Mechanical and Biochemical Aspects. Advances in Experimental Medicine and Biology. 1146: 1-11. PMID 31612450 DOI: 10.1007/978-3-030-17593-1_1  0.92
2019 Jia W, Deshmukh A, Mani SA, Jolly MK, Levine H. A possible role for epigenetic feedback regulation in the dynamics of the Epithelial-Mesenchymal Transition (EMT). Physical Biology. PMID 31342918 DOI: 10.1088/1478-3975/ab34df  0.84
2019 Bocci F, Tripathi SC, Vilchez Mercedes SA, George JT, Casabar JP, Wong PK, Hanash SM, Levine H, Onuchic JN, Jolly MK. NRF2 activates a partial epithelial-mesenchymal transition and is maximally present in a hybrid epithelial/mesenchymal phenotype. Integrative Biology : Quantitative Biosciences From Nano to Macro. PMID 31329868 DOI: 10.1093/intbio/zyz021  1
2019 Feng J, Levine H, Mao X, Sander LM. Cell motility, contact guidance, and durotaxis. Soft Matter. PMID 31161163 DOI: 10.1039/c8sm02564a  0.84
2019 Jia D, Li X, Bocci F, Tripathi S, Deng Y, Jolly MK, Onuchic JN, Levine H. Quantifying Cancer Epithelial-Mesenchymal Plasticity and its Association with Stemness and Immune Response. Journal of Clinical Medicine. 8. PMID 31121840 DOI: 10.3390/jcm8050725  1
2019 Jolly MK, Ware KE, Xu S, Gilja S, Shetler S, Yang Y, Wang X, Austin RG, Runyambo D, Hish AJ, Bartholf DeWitt S, George JT, Kreulen RT, Boss MK, Lazarides AL, ... ... Levine H, et al. E-cadherin represses anchorage-independent growth in sarcomas through both signaling and mechanical mechanisms. Molecular Cancer Research : McR. PMID 30862685 DOI: 10.1158/1541-7786.MCR-18-0763  0.92
2019 Lin X, Kulkarni P, Bocci F, Schafer NP, Roy S, Tsai MY, He Y, Chen Y, Rajagopalan K, Mooney SM, Zeng Y, Weninger K, Grishaev A, Onuchic JN, Levine H, et al. Structural and Dynamical Order of a Disordered Protein: Molecular Insights into Conformational Switching of PAGE4 at the Systems Level. Biomolecules. 9. PMID 30813315 DOI: 10.3390/biom9020077  1
2019 Li X, Gruosso T, Zuo D, Omeroglu A, Meterissian S, Guiot MC, Salazar A, Park M, Levine H. Infiltration of CD8 T cells into tumor cell clusters in triple-negative breast cancer. Proceedings of the National Academy of Sciences of the United States of America. PMID 30733298 DOI: 10.1073/pnas.1817652116  0.52
2019 Jia D, Lu M, Jung KH, Park JH, Yu L, Onuchic JN, Kaipparettu BA, Levine H. Elucidating cancer metabolic plasticity by coupling gene regulation with metabolic pathways. Proceedings of the National Academy of Sciences of the United States of America. PMID 30733294 DOI: 10.1073/pnas.1816391116  1
2019 Shinde A, Hardy SD, Kim D, Akhand SS, Jolly MK, Wang WH, Anderson JC, Khodadadi RB, Brown WS, George JT, Liu S, Wan J, Levine H, Willey CD, Krusemark CJ, et al. Spleen tyrosine kinase-mediated autophagy is required for epithelial-mesenchymal plasticity and metastasis in breast cancer. Cancer Research. PMID 30733195 DOI: 10.1158/0008-5472.CAN-18-2636  0.84
2019 Li X, Jolly MK, George JT, Pienta KJ, Levine H. Computational Modeling of the Crosstalk Between Macrophage Polarization and Tumor Cell Plasticity in the Tumor Microenvironment. Frontiers in Oncology. 9: 10. PMID 30729096 DOI: 10.3389/fonc.2019.00010  0.84
2019 Cao Y, Karmakar R, Ghabache E, Gutierrez E, Zhao Y, Groisman A, Levine H, Camley BA, Rappel WJ. Cell motility dependence on adhesive wetting. Soft Matter. PMID 30724956 DOI: 10.1039/c8sm01832d  0.84
2019 Bocci F, Jolly MK, Levine H, Onuchic JN. Quantitative Characteristic of ncRNA Regulation in Gene Regulatory Networks. Methods in Molecular Biology (Clifton, N.J.). 1912: 341-366. PMID 30635901 DOI: 10.1007/978-1-4939-8982-9_14  1
2019 Bocci F, Gearhart-Serna L, Boareto M, Ribeiro M, Ben-Jacob E, Devi GR, Levine H, Onuchic JN, Jolly MK. Toward understanding cancer stem cell heterogeneity in the tumor microenvironment. Proceedings of the National Academy of Sciences of the United States of America. 116: 148-157. PMID 30587589 DOI: 10.1073/pnas.1815345116  1
2018 Jolly MK, Preca BT, Tripathi SC, Jia D, George JT, Hanash SM, Brabletz T, Stemmler MP, Maurer J, Levine H. Interconnected feedback loops among ESRP1, HAS2, and CD44 regulate epithelial-mesenchymal plasticity in cancer. Apl Bioengineering. 2: 031908. PMID 31069317 DOI: 10.1063/1.5024874  0.84
2018 Jia D, George J, Tripathi S, Kundnani D, Lu M, Hanash S, Onuchic J, Jolly MK, Levine H. Testing the gene expression classification of the EMT spectrum. Physical Biology. PMID 30557866 DOI: 10.1088/1478-3975/aaf8d4  0.84
2018 Jolly MK, Somarelli JA, Sheth M, Biddle A, Tripathi SC, Armstrong AJ, Hanash SM, Bapat SA, Rangarajan A, Levine H. Hybrid epithelial/mesenchymal phenotypes promote metastasis and therapy resistance across carcinomas. Pharmacology & Therapeutics. PMID 30268772 DOI: 10.1016/j.pharmthera.2018.09.007  0.84
2018 George JT, Levine H. Stochastic modeling of tumor progression and immune evasion. Journal of Theoretical Biology. PMID 30218648 DOI: 10.1016/j.jtbi.2018.09.012  0.44
2018 Cheng RR, Haglund E, Tiee NS, Morcos F, Levine H, Adams JA, Jennings PA, Onuchic JN. Designing bacterial signaling interactions with coevolutionary landscapes. Plos One. 13: e0201734. PMID 30125296 DOI: 10.1371/journal.pone.0201734  1
2018 Bocci F, Jolly MK, George JT, Levine H, Onuchic JN. A mechanism-based computational model to capture the interconnections among epithelial-mesenchymal transition, cancer stem cells and Notch-Jagged signaling. Oncotarget. 9: 29906-29920. PMID 30042822 DOI: 10.18632/oncotarget.25692  1
2018 Tripathi S, Jolly MK, Woodward WA, Levine H, Deem MW. Analysis of Hierarchical Organization in Gene Expression Networks Reveals Underlying Principles of Collective Tumor Cell Dissemination and Metastatic Aggressiveness of Inflammatory Breast Cancer. Frontiers in Oncology. 8: 244. PMID 30023340 DOI: 10.3389/fonc.2018.00244  0.84
2018 Jolly MK, Mani SA, Levine H. Hybrid epithelial/mesenchymal phenotype(s): The 'fittest' for metastasis? Biochimica Et Biophysica Acta. PMID 29997040 DOI: 10.1016/j.bbcan.2018.07.001  0.84
2018 Huang B, Jia D, Feng J, Levine H, Onuchic JN, Lu M. RACIPE: a computational tool for modeling gene regulatory circuits using randomization. Bmc Systems Biology. 12: 74. PMID 29914482 DOI: 10.1186/s12918-018-0594-6  1
2018 Sevier SA, Levine H. Properties of gene expression and chromatin structure with mechanically regulated elongation. Nucleic Acids Research. PMID 29860397 DOI: 10.1093/nar/gky382  0.8
2018 Yang Y, Levine H. Role of the supracellular actomyosin cable during epithelial wound healing. Soft Matter. PMID 29850664 DOI: 10.1039/c7sm02521a  0.92
2018 Lin X, Roy S, Jolly MK, Bocci F, Schafer NP, Tsai MY, Chen Y, He Y, Grishaev A, Weninger K, Orban J, Kulkarni P, Rangarajan G, Levine H, Onuchic JN. PAGE4 and Conformational Switching: Insights from Molecular Dynamics Simulations and Implications for Prostate Cancer. Journal of Molecular Biology. PMID 29758263 DOI: 10.1016/j.jmb.2018.05.011  1
2018 Ye F, Jia D, Lu M, Levine H, Deem MW. Modularity of the metabolic gene network as a prognostic biomarker for hepatocellular carcinoma. Oncotarget. 9: 15015-15026. PMID 29599922 DOI: 10.18632/oncotarget.24551  0.84
2018 Jolly MK, Kulkarni P, Weninger K, Orban J, Levine H. Phenotypic Plasticity, Bet-Hedging, and Androgen Independence in Prostate Cancer: Role of Non-Genetic Heterogeneity. Frontiers in Oncology. 8: 50. PMID 29560343 DOI: 10.3389/fonc.2018.00050  0.84
2018 Jia D, Park JH, Jung KH, Levine H, Kaipparettu BA. Elucidating the Metabolic Plasticity of Cancer: Mitochondrial Reprogramming and Hybrid Metabolic States. Cells. 7. PMID 29534029 DOI: 10.3390/cells7030021  0.84
2018 Evans MK, Brown MC, Geradts J, Bao X, Robinson TJ, Jolly MK, Vermeulen P, Palmer GM, Gromeier M, Levine H, Morse MA, Van Laere S, Devi GR. XIAP regulation by MNK links MAPK and NFκB signaling to determine an aggressive breast cancer phenotype. Cancer Research. PMID 29351901 DOI: 10.1158/0008-5472.CAN-17-1667  0.84
2017 Jia D, Jolly MK, Tripathi SC, Den Hollander P, Huang B, Lu M, Celiktas M, Ramirez-Peña E, Ben-Jacob E, Onuchic JN, Hanash SM, Mani SA, Levine H. Distinguishing mechanisms underlying EMT tristability. Cancer Convergence. 1: 2. PMID 29623961 DOI: 10.1186/s41236-017-0005-8  1
2017 Blagoev KB, Ting DT, Levine H, Saenger Y, Tlsty TD, Sun B. Introducing cancer convergence. Cancer Convergence. 1: 3. PMID 29623955 DOI: 10.1186/s41236-017-0003-x  0.68
2017 Ghosh P, Levine H. Morphodynamics of a growing microbial colony driven by cell death. Physical Review. E. 96: 052404. PMID 29347664 DOI: 10.1103/PhysRevE.96.052404  0.64
2017 Yu G, Feng J, Man H, Levine H. Phenomenological modeling of durotaxis. Physical Review. E. 96: 010402. PMID 29347081 DOI: 10.1103/PhysRevE.96.010402  0.84
2017 Zhang Y, Feng J, Heizler SI, Levine H. Hindrances to precise recovery of cellular forces in fibrous biopolymer networks. Physical Biology. PMID 29231177 DOI: 10.1088/1478-3975/aaa107  0.84
2017 Bocci F, Jolly MK, Tripathi SC, Aguilar M, Hanash SM, Levine H, Onuchic JN. Numb prevents a complete epithelial-mesenchymal transition by modulating Notch signalling. Journal of the Royal Society, Interface. 14. PMID 29187638 DOI: 10.1098/rsif.2017.0512  1
2017 Sun L, Noel JK, Levine H, Onuchic JN. Molecular Simulations Suggest a Force-Dependent Mechanism of Vinculin Activation. Biophysical Journal. 113: 1697-1710. PMID 29045864 DOI: 10.1016/j.bpj.2017.08.037  1
2017 Kim J, Feng J, Jones CAR, Mao X, Sander LM, Levine H, Sun B. Stress-induced plasticity of dynamic collagen networks. Nature Communications. 8: 842. PMID 29018207 DOI: 10.1038/s41467-017-01011-7  0.84
2017 George JT, Jolly MK, Xu J, Somarelli J, Levine H. Survival outcomes in cancer patients predicted by a partial EMT gene expression scoring metric. Cancer Research. PMID 28947416 DOI: 10.1158/0008-5472.CAN-16-3521  0.84
2017 George JT, Kessler DA, Levine H. Effects of thymic selection on T cell recognition of foreign and tumor antigenic peptides. Proceedings of the National Academy of Sciences of the United States of America. PMID 28874554 DOI: 10.1073/pnas.1708573114  0.84
2017 Li X, Balagam R, He TF, Lee PP, Igoshin OA, Levine H. On the mechanism of long-range orientational order of fibroblasts. Proceedings of the National Academy of Sciences of the United States of America. PMID 28784754 DOI: 10.1073/pnas.1707210114  0.52
2017 Sevier SA, Levine H. Mechanical Properties of Transcription. Physical Review Letters. 118: 268101. PMID 28707908 DOI: 10.1103/PhysRevLett.118.268101  0.8
2017 Jolly MK, Boareto M, Debeb BG, Aceto N, Farach-Carson MC, Woodward WA, Levine H. Inflammatory breast cancer: a model for investigating cluster-based dissemination. Npj Breast Cancer. 3: 21. PMID 28649661 DOI: 10.1038/s41523-017-0023-9  0.84
2017 Jolly MK, Ward C, Eapen MS, Myers S, Hallgren O, Levine H, Sohal SS. Epithelial mesenchymal transition (EMT), a spectrum of states: role in lung development, homeostasis and disease. Developmental Dynamics : An Official Publication of the American Association of Anatomists. PMID 28646553 DOI: 10.1002/dvdy.24541  0.84
2017 Tripathi SC, Fahrmann JF, Celiktas M, Aguilar M, Marini KD, Jolly MK, Katayama H, Wang H, Murage EN, Dennison JB, Watkins DN, Levine H, Ostrin EJ, Taguchi A, Hanash SM. MCAM mediates chemoresistance in small cell lung cancer via the PI3K/AKT/SOX2 signaling pathway. Cancer Research. PMID 28646020 DOI: 10.1158/0008-5472.CAN-16-2874  0.84
2017 Jia D, Jolly MK, Kulkarni P, Levine H. Phenotypic Plasticity and Cell Fate Decisions in Cancer: Insights from Dynamical Systems Theory. Cancers. 9. PMID 28640191 DOI: 10.3390/cancers9070070  0.84
2017 Jolly MK, Tripathi SC, Somarelli JA, Hanash SM, Levine H. Epithelial-mesenchymal plasticity: How have quantitative mathematical models helped improve our understanding? Molecular Oncology. PMID 28548388 DOI: 10.1002/1878-0261.12084  0.84
2017 Jolly MK, Ware KE, Gilja S, Somarelli JA, Levine H. EMT and MET: necessary or permissive for metastasis? Molecular Oncology. PMID 28548345 DOI: 10.1002/1878-0261.12083  0.84
2017 Ware KE, Gilja S, Xu S, Shetler S, Jolly MK, Wang X, Bartholf Dewitt S, Hish AJ, Jordan S, Eward W, Levine H, Armstrong AJ, Somarelli JA. Induction of Mesenchymal-Epithelial Transitions in Sarcoma Cells. Journal of Visualized Experiments : Jove. PMID 28448023 DOI: 10.3791/55520  0.84
2017 Jia D, Jolly MK, Harrison W, Boareto M, Ben-Jacob E, Levine H. Operating principles of tristable circuits regulating cellular differentiation. Physical Biology. PMID 28443829 DOI: 10.1088/1478-3975/aa6f90  1
2017 Huang B, Lu M, Jia D, Ben-Jacob E, Levine H, Onuchic JN. Interrogating the topological robustness of gene regulatory circuits by randomization. Plos Computational Biology. 13: e1005456. PMID 28362798 DOI: 10.1371/journal.pcbi.1005456  1
2017 Kulkarni P, Jolly MK, Jia D, Mooney SM, Bhargava A, Kagohara LT, Chen Y, Hao P, He Y, Veltri RW, Grishaev A, Weninger K, Levine H, Orban J. Phosphorylation-induced conformational dynamics in an intrinsically disordered protein and potential role in phenotypic heterogeneity. Proceedings of the National Academy of Sciences of the United States of America. PMID 28289210 DOI: 10.1073/pnas.1700082114  0.84
2017 Mooney SM, Talebian V, Jolly MK, Jia D, Gromala M, Levine H, McConkey BJ. The GRHL2/ZEB Feedback Loop - A Key Axis in the Regulation of EMT in Breast Cancer. Journal of Cellular Biochemistry. PMID 28266048 DOI: 10.1002/jcb.25974  0.84
2017 Camley BA, Zhao Y, Li B, Levine H, Rappel WJ. Crawling and turning in a minimal reaction-diffusion cell motility model: Coupling cell shape and biochemistry. Physical Review. E. 95: 012401. PMID 28208438 DOI: 10.1103/PhysRevE.95.012401  0.84
2017 Yu L, Lu M, Jia D, Ma J, Ben-Jacob E, Levine H, Kaipparettu BA, Onuchic JN. Modeling the Genetic Regulation of Cancer Metabolism: Interplay Between Glycolysis and Oxidative Phosphorylation. Cancer Research. PMID 28202516 DOI: 10.1158/0008-5472.CAN-16-2074  1
2016 Sevier SA, Kessler DA, Levine H. Mechanical bounds to transcriptional noise. Proceedings of the National Academy of Sciences of the United States of America. PMID 27911801 DOI: 10.1073/pnas.1612651113  0.84
2016 Feng J, Sevier SA, Huang B, Jia D, Levine H. Modeling delayed processes in biological systems. Physical Review. E. 94: 032408. PMID 27739721 DOI: 10.1103/PhysRevE.94.032408  1
2016 Mooney SM, Jolly MK, Levine H, Kulkarni P. Phenotypic plasticity in prostate cancer: role of intrinsically disordered proteins. Asian Journal of Andrology. PMID 27427552  0.84
2016 Somarelli JA, Shelter S, Jolly MK, Wang X, Bartholf Dewitt S, Hish AJ, Gilja S, Eward WC, Ware KE, Levine H, Armstrong AJ, Garcia-Blanco MA. Mesenchymal-epithelial transition in sarcomas is controlled by the combinatorial expression of miR-200s and GRHL2. Molecular and Cellular Biology. PMID 27402864 DOI: 10.1128/MCB.00373-16  0.84
2016 Camley BA, Zimmermann J, Levine H, Rappel WJ. Collective Signal Processing in Cluster Chemotaxis: Roles of Adaptation, Amplification, and Co-attraction in Collective Guidance. Plos Computational Biology. 12: e1005008. PMID 27367541 DOI: 10.1371/journal.pcbi.1005008  0.84
2016 Boareto M, Jolly MK, Goldman A, Pietilä M, Mani SA, Sengupta S, Ben-Jacob E, Levine H, Onuchic JN. Notch-Jagged signalling can give rise to clusters of cells exhibiting a hybrid epithelial/mesenchymal phenotype. Journal of the Royal Society, Interface / the Royal Society. 13. PMID 27170649 DOI: 10.1098/rsif.2015.1106  1
2016 Grigore AD, Jolly MK, Jia D, Farach-Carson MC, Levine H. Tumor Budding: The Name is EMT. Partial EMT. Journal of Clinical Medicine. 5. PMID 27136592 DOI: 10.3390/jcm5050051  0.84
2016 Jolly MK, Tripathi SC, Jia D, Mooney SM, Celiktas M, Hanash SM, Mani SA, Pienta KJ, Ben-Jacob E, Levine H. Stability of the hybrid epithelial/mesenchymal phenotype. Oncotarget. PMID 27008704 DOI: 10.18632/oncotarget.8166  1
2016 Camley BA, Zimmermann J, Levine H, Rappel WJ. Emergent Collective Chemotaxis without Single-Cell Gradient Sensing. Physical Review Letters. 116: 098101. PMID 26991203 DOI: 10.1103/PhysRevLett.116.098101  0.56
2016 Tripathi SC, Peters HL, Taguchi A, Katayama H, Wang H, Momin A, Jolly MK, Celiktas M, Rodriguez-Canales J, Liu H, Behrens C, Wistuba II, Ben-Jacob E, Levine H, Molldrem JJ, et al. Immunoproteasome deficiency is a feature of non-small cell lung cancer with a mesenchymal phenotype and is associated with a poor outcome. Proceedings of the National Academy of Sciences of the United States of America. PMID 26929325 DOI: 10.1073/pnas.1521812113  1
2016 Zimmermann J, Camley BA, Rappel WJ, Levine H. Contact inhibition of locomotion determines cell-cell and cell-substrate forces in tissues. Proceedings of the National Academy of Sciences of the United States of America. PMID 26903658 DOI: 10.1073/pnas.1522330113  1
2016 Li DS, Zimmermann J, Levine H. Modeling closure of circular wounds through coordinated collective motion. Physical Biology. 13: 016006. PMID 26871883 DOI: 10.1088/1478-3975/13/1/016006  1
2016 Hartz AM, Zhong Y, Wolf A, LeVine H, Miller DS, Bauer B. Aβ40 Reduces P-Glycoprotein at the Blood-Brain Barrier through the Ubiquitin-Proteasome Pathway. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 36: 1930-41. PMID 26865616 DOI: 10.1523/JNEUROSCI.0350-15.2016  0.32
2016 Bhowmik A, Rappel WJ, Levine H. Excitable waves and direction-sensing in Dictyostelium discoideum: steps towards a chemotaxis model. Physical Biology. 13: 016002. PMID 26824302 DOI: 10.1088/1478-3975/13/1/016002  1
2016 Schwarcz D, Levine H, Ben-Jacob E, Ariel G. Uniform modeling of bacterial colony patterns with varying nutrient and substrate Physica D: Nonlinear Phenomena. 318: 91-99. DOI: 10.1016/j.physd.2015.11.002  0.56
2015 Kessler DA, Levine H. Scaling solution in the large population limit of the general asymmetric stochastic Luria-Delbrück evolution process. Journal of Statistical Physics. 158: 783-805. PMID 26900175 DOI: 10.1007/s10955-014-1143-3  0.84
2015 Feng J, Levine H, Mao X, Sander LM. Nonlinear elasticity of disordered fiber networks. Soft Matter. PMID 26616428 DOI: 10.1039/c5sm01856k  0.56
2015 Hecht I, Natan S, Zaritsky A, Levine H, Tsarfaty I, Ben-Jacob E. The motility-proliferation-metabolism interplay during metastatic invasion. Scientific Reports. 5: 13538. PMID 26337223 DOI: 10.1038/srep13538  1
2015 Jones CA, Cibula M, Feng J, Krnacik EA, McIntyre DH, Levine H, Sun B. Micromechanics of cellularized biopolymer networks. Proceedings of the National Academy of Sciences of the United States of America. 112: E5117-22. PMID 26324923 DOI: 10.1073/pnas.1509663112  1
2015 Jolly MK, Jia D, Boareto M, Mani SA, Pienta KJ, Ben-Jacob E, Levine H. Coupling the modules of EMT and stemness: A tunable 'stemness window' model. Oncotarget. PMID 26317796 DOI: 10.18632/oncotarget.4629  1
2015 Jolly MK, Boareto M, Huang B, Jia D, Lu M, Ben-Jacob E, Onuchic JN, Levine H. Implications of the Hybrid Epithelial/Mesenchymal Phenotype in Metastasis. Frontiers in Oncology. 5: 155. PMID 26258068 DOI: 10.3389/fonc.2015.00155  1
2015 Sevier SA, Levine H. Properties of cooperatively induced phases in sensing models. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 91: 052707. PMID 26066199 DOI: 10.1103/PhysRevE.91.052707  0.56
2015 Feng J, Levine H, Mao X, Sander LM. Alignment and nonlinear elasticity in biopolymer gels. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 91: 042710. PMID 25974530 DOI: 10.1103/PhysRevE.91.042710  0.56
2015 Jia D, Jolly MK, Boareto M, Parsana P, Mooney SM, Pienta KJ, Levine H, Ben-Jacob E. OVOL guides the epithelial-hybrid-mesenchymal transition. Oncotarget. PMID 25944618  1
2015 Ghosh P, Mondal J, Ben-Jacob E, Levine H. Mechanically-driven phase separation in a growing bacterial colony. Proceedings of the National Academy of Sciences of the United States of America. 112: E2166-73. PMID 25870260 DOI: 10.1073/pnas.1504948112  1
2015 Jolly MK, Boareto M, Huang B, Jia D, Lu M, Onuchic JN, Levine H, Ben-Jacob E. Implications of the hybrid epithelial/mesenchymal phenotype in metastasis Frontiers in Oncology. 5. DOI: 10.3389/fonc.2015.00155  1
2015 Jolly MK, Boareto M, Huang B, Jia D, Lu M, Onuchic JN, Levine H, Ben-Jacob E. Implications of the hybrid epithelial/mesenchymal phenotype in metastasis Frontiers in Oncology. 5. DOI: 10.3389/fonc.2015.00155  1
2015 Levine HA, Seo YJ. Discrete dynamical systems in multiple target and alternate selex Siam Journal On Applied Dynamical Systems. 14: 1048-1101. DOI: 10.1137/130946368  0.36
2015 Feng J, Levine H, Mao X, Sander LM. Alignment and nonlinear elasticity in biopolymer gels Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 91. DOI: 10.1103/PhysRevE.91.042710  0.56
2015 Fosso MY, LeVine H, Green KD, Tsodikov OV, Garneau-Tsodikova S. Effects of structural modifications on the metal binding, anti-amyloid activity, and cholinesterase inhibitory activity of chalcones Organic and Biomolecular Chemistry. 13: 9418-9426. DOI: 10.1039/c5ob01478f  0.32
2014 Sun L, Noel JK, Sulkowska JI, Levine H, Onuchic JN. Connecting thermal and mechanical protein (un)folding landscapes. Biophysical Journal. 107: 2950-61. PMID 25517160 DOI: 10.1016/j.bpj.2014.10.021  1
2014 Izzo NJ, Xu J, Zeng C, Kirk MJ, Mozzoni K, Silky C, Rehak C, Yurko R, Look G, Rishton G, Safferstein H, Cruchaga C, Goate A, Cahill MA, Arancio O, ... ... LeVine H, et al. Alzheimer's therapeutics targeting amyloid beta 1-42 oligomers II: Sigma-2/PGRMC1 receptors mediate Abeta 42 oligomer binding and synaptotoxicity. Plos One. 9: e111899. PMID 25390692 DOI: 10.1371/journal.pone.0111899  0.32
2014 Izzo NJ, Staniszewski A, To L, Fa M, Teich AF, Saeed F, Wostein H, Walko T, Vaswani A, Wardius M, Syed Z, Ravenscroft J, Mozzoni K, Silky C, Rehak C, ... ... LeVine H, et al. Alzheimer's therapeutics targeting amyloid beta 1-42 oligomers I: Abeta 42 oligomer binding to specific neuronal receptors is displaced by drug candidates that improve cognitive deficits. Plos One. 9: e111898. PMID 25390368 DOI: 10.1371/journal.pone.0111898  0.32
2014 Jolly MK, Huang B, Lu M, Mani SA, Levine H, Ben-Jacob E. Towards elucidating the connection between epithelial-mesenchymal transitions and stemness. Journal of the Royal Society, Interface / the Royal Society. 11: 20140962. PMID 25339690 DOI: 10.1098/rsif.2014.0962  1
2014 Hu B, Rappel WJ, Levine H. How input noise limits biochemical sensing in ultrasensitive systems. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 90: 032702. PMID 25314468 DOI: 10.1103/PhysRevE.90.032702  1
2014 Levine H. Learning physics of living systems from Dictyostelium. Physical Biology. 11: 053011. PMID 25294248 DOI: 10.1088/1478-3975/11/5/053011  1
2014 Camley BA, Zhang Y, Zhao Y, Li B, Ben-Jacob E, Levine H, Rappel WJ. Polarity mechanisms such as contact inhibition of locomotion regulate persistent rotational motion of mammalian cells on micropatterns. Proceedings of the National Academy of Sciences of the United States of America. 111: 14770-5. PMID 25258412 DOI: 10.1073/pnas.1414498111  1
2014 Skoge M, Yue H, Erickstad M, Bae A, Levine H, Groisman A, Loomis WF, Rappel WJ. Cellular memory in eukaryotic chemotaxis. Proceedings of the National Academy of Sciences of the United States of America. 111: 14448-53. PMID 25249632 DOI: 10.1073/pnas.1412197111  1
2014 Kessler DA, Austin RH, Levine H. Resistance to chemotherapy: patient variability and cellular heterogeneity. Cancer Research. 74: 4663-70. PMID 25183790 DOI: 10.1158/0008-5472.CAN-14-0118  1
2014 Levine H. Introduction to physics in cancer research. Cancer Research. 74: 4572-3. PMID 25183782 DOI: 10.1158/0008-5472.CAN-14-0486  1
2014 Zimmermann J, Hayes RL, Basan M, Onuchic JN, Rappel WJ, Levine H. Intercellular stress reconstitution from traction force data. Biophysical Journal. 107: 548-54. PMID 25099794 DOI: 10.1016/j.bpj.2014.06.036  1
2014 Matveev SV, Spielmann HP, Metts BM, Chen J, Onono F, Zhu H, Scheff SW, Walker LC, LeVine H. A distinct subfraction of Aβ is responsible for the high-affinity Pittsburgh compound B-binding site in Alzheimer's disease brain. Journal of Neurochemistry. 131: 356-68. PMID 24995708 DOI: 10.1111/jnc.12815  0.32
2014 Seo YJ, Nilsen-Hamilton M, Levine HA. A computational study of alternate SELEX. Bulletin of Mathematical Biology. 76: 1455-521. PMID 24878869 DOI: 10.1007/s11538-014-9954-6  0.36
2014 Levine H. Physical Biology : challenges for our second decade. Physical Biology. 11: 030201. PMID 24732666 DOI: 10.1088/1478-3975/11/3/030201  1
2014 Cheng RR, Morcos F, Levine H, Onuchic JN. Toward rationally redesigning bacterial two-component signaling systems using coevolutionary information. Proceedings of the National Academy of Sciences of the United States of America. 111: E563-71. PMID 24449878 DOI: 10.1073/pnas.1323734111  1
2014 Feng J, Kessler DA, Ben-Jacob E, Levine H. Growth feedback as a basis for persister bistability. Proceedings of the National Academy of Sciences of the United States of America. 111: 544-9. PMID 24344277 DOI: 10.1073/pnas.1320396110  1
2014 Zimmermann J, Basan M, Levine H. An instability at the edge of a tissue of collectively migrating cells can lead to finger formation during wound healing European Physical Journal: Special Topics. 223: 1259-1264. DOI: 10.1140/epjst/e2014-02189-7  1
2014 Zimmermann J, Basan M, Levine H. An instability at the edge of a tissue of collectively migrating cells can lead to finger formation during wound healing European Physical Journal: Special Topics. 223: 1259-1264. DOI: 10.1140/epjst/e2014-02189-7  0.4
2014 Kessler DA, Levine H. Scaling Solution in the Large Population Limit of the General Asymmetric Stochastic Luria–Delbrück Evolution Process Journal of Statistical Physics. 158: 783-805. DOI: 10.1007/s10955-014-1143-3  1
2014 Kessler DA, Levine H. Scaling Solution in the Large Population Limit of the General Asymmetric Stochastic Luria–Delbrück Evolution Process Journal of Statistical Physics. 158: 783-805. DOI: 10.1007/s10955-014-1143-3  0.84
2013 Levine H, Rappel WJ. The physics of eukaryotic chemotaxis. Physics Today. 66. PMID 24363460 DOI: 10.1063/PT.3.1884  1
2013 Ghosh P, Ben-Jacob E, Levine H. Modeling cell-death patterning during biofilm formation. Physical Biology. 10: 066006. PMID 24275528 DOI: 10.1088/1478-3975/10/6/066006  1
2013 Camley BA, Zhao Y, Li B, Levine H, Rappel WJ. Periodic migration in a physical model of cells on micropatterns. Physical Review Letters. 111: 158102. PMID 24160631 DOI: 10.1103/PhysRevLett.111.158102  1
2013 Lu M, Jolly MK, Levine H, Onuchic JN, Ben-Jacob E. MicroRNA-based regulation of epithelial-hybrid-mesenchymal fate determination. Proceedings of the National Academy of Sciences of the United States of America. 110: 18144-9. PMID 24154725 DOI: 10.1073/pnas.1318192110  1
2013 Samuel A, Levine H, Blagoev KB. Scientific priorities for the BRAIN Initiative. Nature Methods. 10: 713-4. PMID 23900253 DOI: 10.1038/nmeth.2565  1
2013 Blagoev KB, Shukla K, Levine H. We need theoretical physics approaches to study living systems. Physical Biology. 10: 040201. PMID 23883648 DOI: 10.1088/1478-3975/10/4/040201  1
2013 Yang S, Ravikumar KM, Levine H. Energy evaluation of β-strand packing in a fibril-forming SH3 domain. The Journal of Physical Chemistry. B. 117: 13051-7. PMID 23819485 DOI: 10.1021/jp402442p  1
2013 Kessler DA, Levine H. Large population solution of the stochastic Luria-Delbruck evolution model. Proceedings of the National Academy of Sciences of the United States of America. 110: 11682-7. PMID 23818583 DOI: 10.1073/pnas.1309667110  1
2013 Mimouni D, Levine H, Tzurel Ferber A, Rajuan-Galor I, Huerta-Hartal M. Secular trends of chickenpox among military population in Israel in relation to introduction of varicella zoster vaccine 1979-2010. Human Vaccines & Immunotherapeutics. 9: 1303-7. PMID 23412473 DOI: 10.4161/hv.23943  0.08
2013 Basan M, Elgeti J, Hannezo E, Rappel WJ, Levine H. Alignment of cellular motility forces with tissue flow as a mechanism for efficient wound healing. Proceedings of the National Academy of Sciences of the United States of America. 110: 2452-9. PMID 23345440 DOI: 10.1073/pnas.1219937110  1
2012 Hu B, Kessler DA, Rappel WJ, Levine H. How input fluctuations reshape the dynamics of a biological switching system. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 86: 061910. PMID 23367979 DOI: 10.1103/PhysRevE.86.061910  1
2012 Niedowicz DM, Beckett TL, Matveev S, Weidner AM, Baig I, Kryscio RJ, Mendiondo MS, LeVine H, Keller JN, Murphy MP. Pittsburgh compound B and the postmortem diagnosis of Alzheimer disease. Annals of Neurology. 72: 564-70. PMID 23109151 DOI: 10.1002/ana.23633  0.32
2012 Nadkarni S, Bartol TM, Stevens CF, Sejnowski TJ, Levine H. Short-term plasticity constrains spatial organization of a hippocampal presynaptic terminal. Proceedings of the National Academy of Sciences of the United States of America. 109: 14657-62. PMID 22908295 DOI: 10.1073/pnas.1211971109  1
2012 Walker LC, LeVine H. Corruption and spread of pathogenic proteins in neurodegenerative diseases. The Journal of Biological Chemistry. 287: 33109-15. PMID 22879600 DOI: 10.1074/jbc.R112.399378  0.32
2012 Ben-Jacob E, Coffey DS, Levine H. Bacterial survival strategies suggest rethinking cancer cooperativity. Trends in Microbiology. 20: 403-10. PMID 22750098 DOI: 10.1016/j.tim.2012.06.001  1
2012 Howk CL, Levine HA, Smiley MW, Mallapragada SK, Nilsen-Hamilton M, Oh J, Sakaguchi DS. A mathematical model for selective differentiation of neural progenitor cells on micropatterned polymer substrates. Mathematical Biosciences. 238: 65-79. PMID 22569338 DOI: 10.1016/j.mbs.2012.04.001  0.36
2012 Shao D, Levine H, Rappel WJ. Coupling actin flow, adhesion, and morphology in a computational cell motility model. Proceedings of the National Academy of Sciences of the United States of America. 109: 6851-6. PMID 22493219 DOI: 10.1073/pnas.1203252109  1
2012 Bostani N, Kessler DA, Shnerb NM, Rappel WJ, Levine H. Noise effects in nonlinear biochemical signaling. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 85: 011901. PMID 22400585 DOI: 10.1103/PhysRevE.85.011901  1
2012 Takeda K, Shao D, Adler M, Charest PG, Loomis WF, Levine H, Groisman A, Rappel WJ, Firtel RA. Incoherent feedforward control governs adaptation of activated ras in a eukaryotic chemotaxis pathway. Science Signaling. 5: ra2. PMID 22215733 DOI: 10.1126/scisignal.2002413  1
2012 Rosen RF, Fritz JJ, Dooyema J, Cintron AF, Hamaguchi T, Lah JJ, LeVine H, Jucker M, Walker LC. Exogenous seeding of cerebral β-amyloid deposition in βAPP-transgenic rats. Journal of Neurochemistry. 120: 660-6. PMID 22017494 DOI: 10.1111/j.1471-4159.2011.07551.x  0.32
2012 Cenini G, Dowling AL, Beckett TL, Barone E, Mancuso C, Murphy MP, Levine H, Lott IT, Schmitt FA, Butterfield DA, Head E. Association between frontal cortex oxidative damage and beta-amyloid as a function of age in Down syndrome. Biochimica Et Biophysica Acta. 1822: 130-8. PMID 22009041 DOI: 10.1016/j.bbadis.2011.10.001  0.32
2012 Levine HA, Seo YJ, Nilsen-Hamilton M. A discrete dynamical system arising in molecular biology Discrete and Continuous Dynamical Systems - Series B. 17: 2091-2151. DOI: 10.3934/dcdsb.2012.17.2091  0.36
2011 Hu B, Kessler DA, Rappel WJ, Levine H. Effects of input noise on a simple biochemical switch. Physical Review Letters. 107: 148101. PMID 22107236 DOI: 10.1103/PhysRevLett.107.148101  1
2011 Weidner AM, Bradley MA, Beckett TL, Niedowicz DM, Dowling AL, Matveev SV, LeVine H, Lovell MA, Murphy MP. RNA oxidation adducts 8-OHG and 8-OHA change with Aβ42 levels in late-stage Alzheimer's disease. Plos One. 6: e24930. PMID 21949792 DOI: 10.1371/journal.pone.0024930  0.32
2011 Heizler SI, Kessler DA, Levine H. Propagating mode-I fracture in amorphous materials using the continuous random network model. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 84: 026102. PMID 21929059 DOI: 10.1103/PhysRevE.84.026102  1
2011 Hecht I, Levine H, Rappel WJ, Ben-Jacob E. "Self-assisted" amoeboid navigation in complex environments. Plos One. 6: e21955. PMID 21829602 DOI: 10.1371/journal.pone.0021955  1
2011 Hecht I, Skoge ML, Charest PG, Ben-Jacob E, Firtel RA, Loomis WF, Levine H, Rappel WJ. Activated membrane patches guide chemotactic cell motility. Plos Computational Biology. 7: e1002044. PMID 21738453 DOI: 10.1371/journal.pcbi.1002044  1
2011 Hu B, Chen W, Levine H, Rappel WJ. Quantifying information transmission in eukaryotic gradient sensing and chemotactic response. Journal of Statistical Physics. 142: 1167-1186. PMID 21643513 DOI: 10.1007/s10955-011-0156-4  1
2011 Hu B, Chen W, Rappel WJ, Levine H. How geometry and internal bias affect the accuracy of eukaryotic gradient sensing. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 83: 021917. PMID 21405873 DOI: 10.1103/PhysRevE.83.021917  1
2011 Hu B, Levine H, Rappel WJ. Design principles and specificity in biological networks with cross activation. Physical Biology. 8: 026001. PMID 21263168 DOI: 10.1088/1478-3975/8/2/026001  1
2010 Nadkarni S, Bartol TM, Sejnowski TJ, Levine H. Modelling vesicular release at hippocampal synapses. Plos Computational Biology. 6: e1000983. PMID 21085682 DOI: 10.1371/journal.pcbi.1000983  1
2010 Volman V, Levine H, Sejnowski TJ. Shunting inhibition controls the gain modulation mediated by asynchronous neurotransmitter release in early development. Plos Computational Biology. 6: e1000973. PMID 21079676 DOI: 10.1371/journal.pcbi.1000973  1
2010 Skoge M, Adler M, Groisman A, Levine H, Loomis WF, Rappel WJ. Gradient sensing in defined chemotactic fields. Integrative Biology : Quantitative Biosciences From Nano to Macro. 2: 659-68. PMID 20882228 DOI: 10.1039/c0ib00033g  1
2010 Hu B, Chen W, Rappel WJ, Levine H. Physical limits on cellular sensing of spatial gradients. Physical Review Letters. 105: 048104. PMID 20867888 DOI: 10.1103/PhysRevLett.105.048104  1
2010 Shao D, Rappel WJ, Levine H. Computational model for cell morphodynamics. Physical Review Letters. 105: 108104. PMID 20867552 DOI: 10.1103/PhysRevLett.105.108104  1
2010 Wylie CS, Trout AD, Kessler DA, Levine H. Optimal strategy for competence differentiation in bacteria. Plos Genetics. 6: e1001108. PMID 20838595 DOI: 10.1371/journal.pgen.1001108  1
2010 Buenemann M, Levine H, Rappel WJ, Sander LM. The role of cell contraction and adhesion in dictyostelium motility. Biophysical Journal. 99: 50-8. PMID 20655832 DOI: 10.1016/j.bpj.2010.03.057  1
2010 Modchang C, Nadkarni S, Bartol TM, Triampo W, Sejnowski TJ, Levine H, Rappel WJ. A comparison of deterministic and stochastic simulations of neuronal vesicle release models. Physical Biology. 7: 026008. PMID 20505227 DOI: 10.1088/1478-3975/7/2/026008  1
2010 Hecht I, Kessler DA, Levine H. Transient localized patterns in noise-driven reaction-diffusion systems. Physical Review Letters. 104: 158301. PMID 20482022 DOI: 10.1103/PhysRevLett.104.158301  1
2010 Fuller D, Chen W, Adler M, Groisman A, Levine H, Rappel WJ, Loomis WF. External and internal constraints on eukaryotic chemotaxis. Proceedings of the National Academy of Sciences of the United States of America. 107: 9656-9. PMID 20457897 DOI: 10.1073/pnas.0911178107  1
2010 Hu B, Fuller D, Loomis WF, Levine H, Rappel WJ. Phenomenological approach to eukaryotic chemotactic efficiency. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 81: 031906. PMID 20365769 DOI: 10.1103/PhysRevE.81.031906  1
2009 Chen W, Levine H, Rappel WJ. Compartmentalization of second messengers in neurons: a mathematical analysis. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 80: 041901. PMID 19905336 DOI: 10.1103/PhysRevE.80.041901  1
2009 Volman V, Levine H. Signal processing in local neuronal circuits based on activity-dependent noise and competition. Chaos (Woodbury, N.Y.). 19: 033107. PMID 19791987 DOI: 10.1063/1.3184806  1
2009 Volman V, Levine H, Ben-Jacob E, Sejnowski TJ. Locally balanced dendritic integration by short-term synaptic plasticity and active dendritic conductances. Journal of Neurophysiology. 102: 3234-50. PMID 19759328 DOI: 10.1152/jn.00260.2009  1
2009 Hu B, Rappel WJ, Levine H. Mechanisms and constraints on yeast MAPK signaling specificity. Biophysical Journal. 96: 4755-63. PMID 19527636 DOI: 10.1016/j.bpj.2009.02.065  1
2009 Hecht I, Rappel WJ, Levine H. Determining the scale of the Bicoid morphogen gradient. Proceedings of the National Academy of Sciences of the United States of America. 106: 1710-5. PMID 19190186 DOI: 10.1073/pnas.0807655106  1
2009 Wylie CS, Ghim CM, Kessler D, Levine H. The fixation probability of rare mutators in finite asexual populations. Genetics. 181: 1595-612. PMID 19153261 DOI: 10.1534/genetics.108.094532  1
2009 De Pittà M, Volman V, Levine H, Ben-Jacob E. Multimodal encoding in a simplified model of intracellular calcium signaling. Cognitive Processing. 10: S55-70. PMID 19030904 DOI: 10.1007/s10339-008-0242-y  1
2009 De Pittà M, Volman V, Levine H, Ben-Jacob E. Multimodal encoding in a simplified model of intracellular calcium signaling (Cognitive Processing DOI: 10.1007/s10339-008-0242-y) Cognitive Processing. 10: 127. DOI: 10.1007/s10339-008-0254-7  1
2009 Rappel WJ, Levine H. The role of receptor occupancy noise in eukaryotic chemotaxis Understanding Complex Systems. 2009: 61-69. DOI: 10.1007/978-3-540-85632-0_6  1
2008 Chen W, Levine H, Rappel WJ. A mathematical analysis of second messenger compartmentalization. Physical Biology. 5: 046006. PMID 19075354 DOI: 10.1088/1478-3975/5/4/046006  1
2008 Rappel WJ, Levine H. Receptor noise limitations on chemotactic sensing. Proceedings of the National Academy of Sciences of the United States of America. 105: 19270-5. PMID 19064934 DOI: 10.1073/pnas.0804702105  1
2008 Rappel WJ, Levine H. Receptor noise and directional sensing in eukaryotic chemotaxis. Physical Review Letters. 100: 228101. PMID 18643461 DOI: 10.1103/PhysRevLett.100.228101  1
2008 Volman V, Levine H. Activity-dependent stochastic resonance in recurrent neuronal networks. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 77: 060903. PMID 18643209 DOI: 10.1103/PhysRevE.77.060903  1
2008 De Pittà M, Volman V, Levine H, Pioggia G, De Rossi D, Ben-Jacob E. Coexistence of amplitude and frequency modulations in intracellular calcium dynamics. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 77: 030903. PMID 18517322 DOI: 10.1103/PhysRevE.77.030903  1
2008 Nadkarni S, Jung P, Levine H. Astrocytes optimize the synaptic transmission of information. Plos Computational Biology. 4: e1000088. PMID 18516277 DOI: 10.1371/journal.pcbi.1000088  1
2007 Levine E, McHale P, Levine H. Small regulatory RNAs may sharpen spatial expression patterns. Plos Computational Biology. 3: e233. PMID 18052540 DOI: 10.1371/journal.pcbi.0030233  1
2007 Hecht I, Ben-Jacob E, Levine H. Correlated phenotypic transitions to competence in bacterial colonies. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 76: 040901. PMID 17994927 DOI: 10.1103/PhysRevE.76.040901  1
2007 Levine E, Ben Jacob E, Levine H. Target-specific and global effectors in gene regulation by MicroRNA. Biophysical Journal. 93: L52-4. PMID 17872959 DOI: 10.1529/biophysj.107.118448  1
2007 Yang S, Onuchic JN, García AE, Levine H. Folding time predictions from all-atom replica exchange simulations. Journal of Molecular Biology. 372: 756-63. PMID 17681536 DOI: 10.1016/j.jmb.2007.07.010  1
2007 Wang K, Rappel WJ, Kerr R, Levine H. Quantifying noise levels of intercellular signals. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 75: 061905. PMID 17677298 DOI: 10.1103/PhysRevE.75.061905  1
2007 Volman V, Ben-Jacob E, Levine H. The astrocyte as a gatekeeper of synaptic information transfer. Neural Computation. 19: 303-26. PMID 17206866 DOI: 10.1162/neco.2007.19.2.303  1
2006 Yang S, Onuchic JN, Levine H. Effective stochastic dynamics on a protein folding energy landscape. The Journal of Chemical Physics. 125: 054910. PMID 16942260 DOI: 10.1063/1.2229206  1
2006 Wylie CS, Levine H, Kessler DA. Fluctuation-induced instabilities in front propagation up a comoving reaction gradient in two dimensions. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 74: 016119. PMID 16907163  0.84
2006 Ben-Jacob E, Levine H. Self-engineering capabilities of bacteria. Journal of the Royal Society, Interface / the Royal Society. 3: 197-214. PMID 16849231 DOI: 10.1098/rsif.2005.0089  1
2006 McHale P, Rappel WJ, Levine H. Embryonic pattern scaling achieved by oppositely directed morphogen gradients. Physical Biology. 3: 107-20. PMID 16829697 DOI: 10.1088/1478-3975/3/2/003  1
2006 Levine H, Kessler DA, Rappel WJ. Directional sensing in eukaryotic chemotaxis: a balanced inactivation model. Proceedings of the National Academy of Sciences of the United States of America. 103: 9761-6. PMID 16782813 DOI: 10.1073/pnas.0601302103  1
2006 Cohen E, Kessler DA, Levine H. Analytic approach to the evolutionary effects of genetic exchange. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 73: 016113. PMID 16486222 DOI: 10.1103/PhysRevE.73.016113  1
2006 Kerr RA, Levine H, Sejnowski TJ, Rappel WJ. Division accuracy in a stochastic model of Min oscillations in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 103: 347-52. PMID 16387859 DOI: 10.1073/pnas.0505825102  1
2006 Wylie CS, Levine H, Kessler DA. Fluctuation-induced instabilities in front propagation up a comoving reaction gradient in two dimensions Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 74. DOI: 10.1103/PhysRevE.74.016119  1
2006 Levine H, Ben-Jacob E, Cohen I, Rappel WJ. Swarming patterns in Microorganisms: Some new modeling results Proceedings of the Ieee Conference On Decision and Control. 5073-5077.  1
2005 Cohen E, Kessler DA, Levine H. Front propagation up a reaction rate gradient. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 72: 066126. PMID 16486029 DOI: 10.1103/PhysRevE.72.066126  1
2005 Levine H, Rappel WJ. Membrane-bound Turing patterns. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 72: 061912. PMID 16485979 DOI: 10.1103/PhysRevE.72.061912  1
2005 Yang S, Levine H, Onuchic JN, Cox DL. Structure of infectious prions: stabilization by domain swapping. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 19: 1778-82. PMID 16260647 DOI: 10.1096/fj.05-4067hyp  1
2005 Wang K, Tu Y, Rappel WJ, Levine H. Excitation-contraction coupling gain and cooperativity of the cardiac ryanodine receptor: a modeling approach. Biophysical Journal. 89: 3017-25. PMID 16126827 DOI: 10.1529/biophysj.105.058958  1
2005 Yang S, Levine H, Onuchic JN. Protein oligomerization through domain swapping: role of inter-molecular interactions and protein concentration. Journal of Molecular Biology. 352: 202-11. PMID 16061250 DOI: 10.1016/j.jmb.2005.06.062  1
2005 Cohen E, Kessler DA, Levine H. Fluctuation-regularized front propagation dynamics in reaction-diffusion systems. Physical Review Letters. 94: 158302. PMID 15904196 DOI: 10.1103/PhysRevLett.94.158302  1
2005 Cohen E, Kessler DA, Levine H. Recombination dramatically speeds up evolution of finite populations. Physical Review Letters. 94: 098102. PMID 15784005 DOI: 10.1103/PhysRevLett.94.098102  1
2005 Blinder P, Baruchi I, Volman V, Levine H, Baranes D, Ben Jacob E. Functional topology classification of biological computing networks Natural Computing. 4: 339-361. DOI: 10.1007/s11047-005-3667-6  1
2005 Henry H, Levine H. Instabilities of dynamic crack using a phase field model of brittle fracture under inplane loading 11th International Conference On Fracture 2005, Icf11. 7: 5246-5250.  1
2004 Wang K, Rappel WJ, Levine H. Cooperativity can reduce stochasticity in intracellular calcium dynamics. Physical Biology. 1: 27-34. PMID 16204819 DOI: 10.1088/1478-3967/1/1/003  0.84
2004 Levine H, Ben-Jacob E. Physical schemata underlying biological pattern formation-examples, issues and strategies. Physical Biology. 1: P14-22. PMID 16204813 DOI: 10.1088/1478-3967/1/2/P01  1
2004 Henry H, Levine H. Dynamic instabilities of fracture under biaxial strain using a phase field model. Physical Review Letters. 93: 105504. PMID 15447417 DOI: 10.1103/PhysRevLett.93.105504  1
2004 Yang S, Cho SS, Levy Y, Cheung MS, Levine H, Wolynes PG, Onuchic JN. Domain swapping is a consequence of minimal frustration. Proceedings of the National Academy of Sciences of the United States of America. 101: 13786-91. PMID 15361578 DOI: 10.1073/pnas.0403724101  1
2004 Ben Jacob E, Becker I, Shapira Y, Levine H. Bacterial linguistic communication and social intelligence. Trends in Microbiology. 12: 366-72. PMID 15276612 DOI: 10.1016/j.tim.2004.06.006  1
2004 Peng W, Levine H, Hwa T, Kessler DA. Analytical study of the effect of recombination on evolution via DNA shuffling. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 69: 051911. PMID 15244851  1
2003 Kockelkoren J, Levine H, Rappel WJ. Computational approach for modeling intra- and extracellular dynamics. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 68: 037702. PMID 14524934 DOI: 10.1103/PhysRevE.68.037702  0.84
2003 Kessler DA, Levine H. Does the continuum theory of dynamic fracture work? Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 68: 036118. PMID 14524843 DOI: 10.1103/PhysRevE.68.036118  0.84
2003 Strain MC, Günthard HF, Havlir DV, Ignacio CC, Smith DM, Leigh-Brown AJ, Macaranas TR, Lam RY, Daly OA, Fischer M, Opravil M, Levine H, Bacheler L, Spina CA, Richman DD, et al. Heterogeneous clearance rates of long-lived lymphocytes infected with HIV: intrinsic stability predicts lifelong persistence. Proceedings of the National Academy of Sciences of the United States of America. 100: 4819-24. PMID 12684537 DOI: 10.1073/pnas.0736332100  1
2002 Strain MC, Levine H. Comment on "dynamics of HIV infection: a cellular automata approach". Physical Review Letters. 89: 219805. PMID 12443459  1
2002 Ahrens KF, Levine H, Suhl H, Kleinfeld D. Spectral mixing of rhythmic neuronal signals in sensory cortex. Proceedings of the National Academy of Sciences of the United States of America. 99: 15176-81. PMID 12403828 DOI: 10.1073/pnas.222547199  1
2002 Strain MC, Richman DD, Wong JK, Levine H. Spatiotemporal dynamics of HIV propagation. Journal of Theoretical Biology. 218: 85-96. PMID 12297072 DOI: 10.1006/jtbi.2002.3055  1
2002 Heizler SI, Kessler DA, Levine H. Mode-I fracture in a nonlinear lattice with viscoelastic forces. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 66: 016126. PMID 12241445 DOI: 10.1103/PhysRevE.66.016126  0.84
2002 Rappel WJ, Thomas PJ, Levine H, Loomis WF. Establishing direction during chemotaxis in eukaryotic cells. Biophysical Journal. 83: 1361-7. PMID 12202361 DOI: 10.1016/S0006-3495(02)73906-4  1
2000 Guo C, Levine H. A statistical mechanics model for receptor clustering. Journal of Biological Physics. 26: 219-34. PMID 23345723 DOI: 10.1023/A:1010313529687  1
2000 Arouh S, Levine H. Nutrient chemotaxis suppression of a diffusive instability in bacterial colony dynamics. Physical Review. E, Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 62: 1444-7. PMID 11088611 DOI: 10.1103/PhysRevE.62.1444  1
2000 Guo C, Levine H, Kessler DA. Two state behavior in a solvable model of beta-hairpin folding. Physical Review Letters. 84: 3490-3. PMID 11019122  1
2000 Guo C, Levine H, Kessler DA. How does a beta -hairpin fold/unfold? competition between topology and heterogeneity in a solvable model. Proceedings of the National Academy of Sciences of the United States of America. 97: 10775-9. PMID 10995462 DOI: 10.1073/pnas.190103297  1
1999 Guo C, Levine H. A thermodynamic model for receptor clustering. Biophysical Journal. 77: 2358-65. PMID 10545339  1
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