Eneritz Agirre - Publications

Affiliations: 
Karolinska Institute, Stockholm, Sweden 

14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2025 Birk S, Bonafonte-Pardàs I, Feriz AM, Boxall A, Agirre E, Memi F, Maguza A, Yadav A, Armingol E, Fan R, Castelo-Branco G, Theis FJ, Bayraktar OA, Talavera-López C, Lotfollahi M. Quantitative characterization of cell niches in spatially resolved omics data. Nature Genetics. 57: 897-909. PMID 40102688 DOI: 10.1038/s41588-025-02120-6  0.593
2024 Macnair W, Calini D, Agirre E, Bryois J, Jäkel S, Smith RS, Kukanja P, Stokar-Regenscheit N, Ott V, Foo LC, Collin L, Schippling S, Urich E, Nutma E, Marzin M, et al. snRNA-seq stratifies multiple sclerosis patients into distinct white matter glial responses. Neuron. PMID 39708806 DOI: 10.1016/j.neuron.2024.11.016  0.646
2024 Kukanja P, Langseth CM, Rubio Rodríguez-Kirby LA, Agirre E, Zheng C, Raman A, Yokota C, Avenel C, Tiklová K, Guerreiro-Cacais AO, Olsson T, Hilscher MM, Nilsson M, Castelo-Branco G. Cellular architecture of evolving neuroinflammatory lesions and multiple sclerosis pathology. Cell. PMID 38513664 DOI: 10.1016/j.cell.2024.02.030  0.64
2023 Zhang D, Deng Y, Kukanja P, Agirre E, Bartosovic M, Dong M, Ma C, Ma S, Su G, Bao S, Liu Y, Xiao Y, Rosoklija GB, Dwork AJ, Mann JJ, et al. Spatial epigenome-transcriptome co-profiling of mammalian tissues. Nature. PMID 36922587 DOI: 10.1038/s41586-023-05795-1  0.593
2022 Meijer M, Agirre E, Kabbe M, van Tuijn CA, Heskol A, Zheng C, Mendanha Falcão A, Bartosovic M, Kirby L, Calini D, Johnson MR, Corces MR, Montine TJ, Chen X, Chang HY, et al. Epigenomic priming of immune genes implicates oligodendroglia in multiple sclerosis susceptibility. Neuron. PMID 35093191 DOI: 10.1016/j.neuron.2021.12.034  0.632
2021 Bonetti A, Agostini F, Suzuki AM, Hashimoto K, Pascarella G, Gimenez J, Roos L, Nash AJ, Ghilotti M, Cameron CJF, Valentine M, Medvedeva YA, Noguchi S, Agirre E, Kashi K, et al. Author Correction: RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions. Nature Communications. 12: 3128. PMID 34011993 DOI: 10.1038/s41467-021-23542-w  0.585
2020 Bonetti A, Agostini F, Suzuki AM, Hashimoto K, Pascarella G, Gimenez J, Roos L, Nash AJ, Ghilotti M, Cameron CJF, Valentine M, Medvedeva YA, Noguchi S, Agirre E, Kashi K, et al. RADICL-seq identifies general and cell type-specific principles of genome-wide RNA-chromatin interactions. Nature Communications. 11: 1018. PMID 32094342 DOI: 10.1038/S41467-020-14337-6  0.592
2020 Marisca R, Hoche T, Agirre E, Hoodless LJ, Barkey W, Auer F, Castelo-Branco G, Czopka T. Functionally distinct subgroups of oligodendrocyte precursor cells integrate neural activity and execute myelin formation. Nature Neuroscience. PMID 32066987 DOI: 10.1038/S41593-019-0581-2  0.616
2019 Tripathi A, Volsko C, Garcia JP, Agirre E, Allan KC, Tesar PJ, Trapp BD, Castelo-Branco G, Sim FJ, Dutta R. Oligodendrocyte Intrinsic miR-27a Controls Myelination and Remyelination. Cell Reports. 29: 904-919.e9. PMID 31644912 DOI: 10.1016/J.Celrep.2019.09.020  0.571
2019 Kupari J, Häring M, Agirre E, Castelo-Branco G, Ernfors P. An Atlas of Vagal Sensory Neurons and Their Molecular Specialization. Cell Reports. 27: 2508-2523.e4. PMID 31116992 DOI: 10.1016/J.Celrep.2019.04.096  0.559
2019 Falcão AM, Meijer M, Scaglione A, Rinwa P, Agirre E, Liang J, Larsen SC, Heskol A, Frawley R, Klingener M, Varas-Godoy M, Raposo AASF, Ernfors P, Castro DS, Nielsen ML, et al. PAD2-Mediated Citrullination Contributes to Efficient Oligodendrocyte Differentiation and Myelination. Cell Reports. 27: 1090-1102.e10. PMID 31018126 DOI: 10.1016/J.Celrep.2019.03.108  0.62
2019 Jäkel S, Agirre E, Falcão AM, van Bruggen D, Lee KW, Knuesel I, Malhotra D, Ffrench-Constant C, Williams A, Castelo-Branco G. Altered human oligodendrocyte heterogeneity in multiple sclerosis. Nature. PMID 30747918 DOI: 10.1038/S41586-019-0903-2  0.658
2018 Falcão AM, van Bruggen D, Marques S, Meijer M, Jäkel S, Agirre E, Samudyata, Floriddia EM, Vanichkina DP, Ffrench-Constant C, Williams A, Guerreiro-Cacais AO, Castelo-Branco G. Disease-specific oligodendrocyte lineage cells arise in multiple sclerosis. Nature Medicine. PMID 30420755 DOI: 10.1038/S41591-018-0236-Y  0.663
2017 van Bruggen D, Agirre E, Castelo-Branco G. Single-cell transcriptomic analysis of oligodendrocyte lineage cells. Current Opinion in Neurobiology. 47: 168-175. PMID 29126015 DOI: 10.1016/J.Conb.2017.10.005  0.633
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