Marnie E. Halpern - Publications

Carnegie Institution for Science, Dept. of Embryology 
development, midline, left-right asymmetry

67 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Duboué ER, Hong E, Eldred KC, Halpern ME. Left Habenular Activity Attenuates Fear Responses in Larval Zebrafish. Current Biology : Cb. PMID 28712566 DOI: 10.1016/j.cub.2017.06.017  0.44
2016 Rochard L, Monica SD, Ling IT, Kong Y, Roberson S, Harland R, Halpern M, Liao EC. Roles of Wnt pathway genes wls, wnt9a, wnt5b, frzb and gpc4 in regulating convergent-extension during palate morphogenesis. Development (Cambridge, England). PMID 27287801 DOI: 10.1242/dev.137000  1
2015 Facchin L, Duboué ER, Halpern ME. Disruption of Epithalamic Left-Right Asymmetry Increases Anxiety in Zebrafish. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 35: 15847-59. PMID 26631467 DOI: 10.1523/JNEUROSCI.2593-15.2015  1
2015 Kuan YS, Roberson S, Akitake CM, Fortuno L, Gamse J, Moens C, Halpern ME. Distinct requirements for Wntless in habenular development. Developmental Biology. PMID 26116173 DOI: 10.1016/J.Ydbio.2015.06.006  1
2014 Halpern ME, Hobert O, Wright CV. Left-right asymmetry: advances and enigmas. Genesis (New York, N.Y. : 2000). 52: 451-4. PMID 24943067 DOI: 10.1002/Dvg.22791  1
2014 Carroll KJ, Esain V, Garnaas MK, Cortes M, Dovey MC, Nissim S, Frechette GM, Liu SY, Kwan W, Cutting CC, Harris JM, Gorelick DA, Halpern ME, Lawson ND, Goessling W, et al. Estrogen defines the dorsal-ventral limit of VEGF regulation to specify the location of the hemogenic endothelial niche. Developmental Cell. 29: 437-53. PMID 24871948 DOI: 10.1016/J.Devcel.2014.04.012  1
2014 deCarvalho TN, Subedi A, Rock J, Harfe BD, Thisse C, Thisse B, Halpern ME, Hong E. Neurotransmitter map of the asymmetric dorsal habenular nuclei of zebrafish. Genesis (New York, N.Y. : 2000). 52: 636-55. PMID 24753112 DOI: 10.1002/dvg.22785  1
2014 Blasic JR, Matos-Cruz V, Ujla D, Cameron EG, Hattar S, Halpern ME, Robinson PR. Identification of critical phosphorylation sites on the carboxy tail of melanopsin. Biochemistry. 53: 2644-9. PMID 24678795 DOI: 10.1021/Bi401724R  1
2014 Gorelick DA, Iwanowicz LR, Hung AL, Blazer VS, Halpern ME. Transgenic zebrafish reveal tissue-specific differences in estrogen signaling in response to environmental water samples. Environmental Health Perspectives. 122: 356-62. PMID 24425189 DOI: 10.1289/Ehp.1307329  1
2014 Subedi A, Macurak M, Gee ST, Monge E, Goll MG, Potter CJ, Parsons MJ, Halpern ME. Adoption of the Q transcriptional regulatory system for zebrafish transgenesis. Methods (San Diego, Calif.). 66: 433-40. PMID 23792917 DOI: 10.1016/J.Ymeth.2013.06.012  1
2013 Hong E, Santhakumar K, Akitake CA, Ahn SJ, Thisse C, Thisse B, Wyart C, Mangin JM, Halpern ME. Cholinergic left-right asymmetry in the habenulo-interpeduncular pathway. Proceedings of the National Academy of Sciences of the United States of America. 110: 21171-6. PMID 24327734 DOI: 10.1073/pnas.1319566110  1
2013 deCarvalho TN, Akitake CM, Thisse C, Thisse B, Halpern ME. Aversive cues fail to activate fos expression in the asymmetric olfactory-habenula pathway of zebrafish. Frontiers in Neural Circuits. 7: 98. PMID 23734103 DOI: 10.3389/fncir.2013.00098  1
2012 Halpern ME, Storey KG. Layers of complexity: diverse molecular mechanisms transforming germ layers into organisms. Current Opinion in Genetics & Development. 22: 305-7. PMID 22841369 DOI: 10.1016/J.Gde.2012.07.007  1
2011 Matos-Cruz V, Blasic J, Nickle B, Robinson PR, Hattar S, Halpern ME. Unexpected diversity and photoperiod dependence of the zebrafish melanopsin system. Plos One. 6: e25111. PMID 21966429 DOI: 10.1371/Journal.Pone.0025111  1
2011 Doll CA, Burkart JT, Hope KD, Halpern ME, Gamse JT. Subnuclear development of the zebrafish habenular nuclei requires ER translocon function. Developmental Biology. 360: 44-57. PMID 21945073 DOI: 10.1016/j.ydbio.2011.09.003  1
2011 Gorelick DA, Halpern ME. Visualization of estrogen receptor transcriptional activation in zebrafish. Endocrinology. 152: 2690-703. PMID 21540282 DOI: 10.1210/En.2010-1257  1
2011 Goll MG, Halpern ME. DNA methylation in zebrafish. Progress in Molecular Biology and Translational Science. 101: 193-218. PMID 21507352 DOI: 10.1016/B978-0-12-387685-0.00005-6  1
2011 Akitake CM, Macurak M, Halpern ME, Goll MG. Transgenerational analysis of transcriptional silencing in zebrafish. Developmental Biology. 352: 191-201. PMID 21223961 DOI: 10.1016/j.ydbio.2011.01.002  1
2010 Anderson JL, Macurak ML, Halpern ME, Farber SA. A versatile aquatics facility inventory system with real-time barcode scan entry. Zebrafish. 7: 281-7. PMID 20874493 DOI: 10.1089/zeb.2010.0661  1
2009 Anderson RM, Bosch JA, Goll MG, Hesselson D, Dong PD, Shin D, Chi NC, Shin CH, Schlegel A, Halpern M, Stainier DY. Loss of Dnmt1 catalytic activity reveals multiple roles for DNA methylation during pancreas development and regeneration. Developmental Biology. 334: 213-23. PMID 19631206 DOI: 10.1016/J.Ydbio.2009.07.017  1
2009 Goll MG, Anderson R, Stainier DY, Spradling AC, Halpern ME. Transcriptional silencing and reactivation in transgenic zebrafish. Genetics. 182: 747-55. PMID 19433629 DOI: 10.1534/genetics.109.102079  1
2009 Facchin L, Burgess HA, Siddiqi M, Granato M, Halpern ME. Determining the function of zebrafish epithalamic asymmetry. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 364: 1021-32. PMID 19064346 DOI: 10.1098/Rstb.2008.0234  1
2009 Brösamle C, Halpern ME. Nogo-Nogo receptor signalling in PNS axon outgrowth and pathfinding. Molecular and Cellular Neurosciences. 40: 401-9. PMID 19041397 DOI: 10.1016/j.mcn.2008.10.009  1
2008 Gorelick DA, Watson W, Halpern ME. Androgen receptor gene expression in the developing and adult zebrafish brain. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 237: 2987-95. PMID 18816841 DOI: 10.1002/Dvdy.21700  1
2008 Halpern ME, Rhee J, Goll MG, Akitake CM, Parsons M, Leach SD. Gal4/UAS transgenic tools and their application to zebrafish. Zebrafish. 5: 97-110. PMID 18554173 DOI: 10.1089/Zeb.2008.0530  1
2008 Halpern ME, Hobin JA. Evolving into science advocates. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 237: 1215-7. PMID 18407547 DOI: 10.1002/dvdy.21548  1
2008 Snelson CD, Santhakumar K, Halpern ME, Gamse JT. Tbx2b is required for the development of the parapineal organ. Development (Cambridge, England). 135: 1693-702. PMID 18385257 DOI: 10.1242/Dev.016576  1
2007 Kuan YS, Gamse JT, Schreiber AM, Halpern ME. Selective asymmetry in a conserved forebrain to midbrain projection. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 308: 669-78. PMID 17592620 DOI: 10.1002/jez.b.21184  1
2007 Davison JM, Akitake CM, Goll MG, Rhee JM, Gosse N, Baier H, Halpern ME, Leach SD, Parsons MJ. Transactivation from Gal4-VP16 transgenic insertions for tissue-specific cell labeling and ablation in zebrafish. Developmental Biology. 304: 811-24. PMID 17335798 DOI: 10.1016/J.Ydbio.2007.01.033  1
2007 Kuan YS, Yu HH, Moens CB, Halpern ME. Neuropilin asymmetry mediates a left-right difference in habenular connectivity. Development (Cambridge, England). 134: 857-65. PMID 17251263 DOI: 10.1242/dev.02791  1
2005 Halpern ME, Güntürkün O, Hopkins WD, Rogers LJ. Lateralization of the vertebrate brain: taking the side of model systems. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 25: 10351-7. PMID 16280571 DOI: 10.1523/JNEUROSCI.3439-05.2005  1
2005 Gamse JT, Kuan YS, Macurak M, Brösamle C, Thisse B, Thisse C, Halpern ME. Directional asymmetry of the zebrafish epithalamus guides dorsoventral innervation of the midbrain target. Development (Cambridge, England). 132: 4869-81. PMID 16207761 DOI: 10.1242/dev.02046  1
2004 Halpern M. Preface. Mechanisms of Development. 121: 597. PMID 15210168 DOI: 10.1016/j.mod.2004.05.016  1
2003 Fisher S, Jagadeeswaran P, Halpern ME. Radiographic analysis of zebrafish skeletal defects. Developmental Biology. 264: 64-76. PMID 14623232 DOI: 10.1016/S0012-1606(03)00399-3  1
2003 Farber SA, De Rose RA, Olson ES, Halpern ME. The zebrafish annexin gene family. Genome Research. 13: 1082-96. PMID 12799347 DOI: 10.1101/gr.479603  1
2003 Halpern ME, Liang JO, Gamse JT. Leaning to the left: laterality in the zebrafish forebrain. Trends in Neurosciences. 26: 308-13. PMID 12798600 DOI: 10.1016/S0166-2236(03)00129-2  1
2003 Gamse JT, Thisse C, Thisse B, Halpern ME. The parapineal mediates left-right asymmetry in the zebrafish diencephalon. Development (Cambridge, England). 130: 1059-68. PMID 12571098 DOI: 10.1242/dev.00270  1
2002 Wright CV, Halpern ME. Specification of left-right asymmetry. Results and Problems in Cell Differentiation. 40: 96-116. PMID 12353488 DOI: 10.1007/978-3-540-46041-1_6  1
2002 Brösamle C, Halpern ME. Characterization of myelination in the developing zebrafish. Glia. 39: 47-57. PMID 12112375 DOI: 10.1002/glia.10088  1
2002 Gamse JT, Shen YC, Thisse C, Thisse B, Raymond PA, Halpern ME, Liang JO. Otx5 regulates genes that show circadian expression in the zebrafish pineal complex. Nature Genetics. 30: 117-21. PMID 11753388 DOI: 10.1038/ng793  1
2001 Etheridge LA, Wu T, Liang JO, Ekker SC, Halpern ME. Floor plate develops upon depletion of tiggy-winkle and sonic hedgehog. Genesis (New York, N.Y. : 2000). 30: 164-9. PMID 11477699 DOI: 10.1002/Gene.1056  1
2001 Farber SA, Pack M, Ho SY, Johnson ID, Wagner DS, Dosch R, Mullins MC, Hendrickson HS, Hendrickson EK, Halpern ME. Genetic analysis of digestive physiology using fluorescent phospholipid reporters. Science (New York, N.Y.). 292: 1385-8. PMID 11359013 DOI: 10.1126/science.1060418  1
2000 Halpern M, Seydoux G. Embryo emergent: elucidating the cell biology of development. The Santa Cruz Conference on Developmental Biology 2000. Embo Reports. 1: 469-72. PMID 11263487 DOI: 10.1093/Embo-Reports/Kvd115  1
2000 Liang JO, Etheridge A, Hantsoo L, Rubinstein AL, Nowak SJ, Izpisúa Belmonte JC, Halpern ME. Asymmetric nodal signaling in the zebrafish diencephalon positions the pineal organ. Development (Cambridge, England). 127: 5101-12. PMID 11060236  1
2000 Yelon D, Ticho B, Halpern ME, Ruvinsky I, Ho RK, Silver LM, Stainier DY. The bHLH transcription factor hand2 plays parallel roles in zebrafish heart and pectoral fin development. Development (Cambridge, England). 127: 2573-82. PMID 10821756  1
2000 Le Douarin NM, Halpern ME. Discussion point. Origin and specification of the neural tube floor plate: insights from the chick and zebrafish. Current Opinion in Neurobiology. 10: 23-30. PMID 10679443 DOI: 10.1016/S0959-4388(99)00062-8  1
2000 Rubinstein AL, Lee D, Luo R, Henion PD, Halpern ME. Genes dependent on zebrafish cyclops function identified by AFLP differential gene expression screen. Genesis (New York, N.Y. : 2000). 26: 86-97. PMID 10660676 DOI: 10.1002/(SICI)1526-968X(200001)26:1<86::AID-GENE11>3.0.CO;2-Q  1
1999 Fisher S, Halpern ME. Patterning the zebrafish axial skeleton requires early chordin function. Nature Genetics. 23: 442-6. PMID 10581032 DOI: 10.1038/70557  1
1999 Miller-Bertoglio V, Carmany-Rampey A, Fürthauer M, Gonzalez EM, Thisse C, Thisse B, Halpern ME, Solnica-Krezel L. Maternal and zygotic activity of the zebrafish ogon locus antagonizes BMP signaling. Developmental Biology. 214: 72-86. PMID 10491258 DOI: 10.1006/dbio.1999.9384  1
1999 Farber SA, Olson ES, Clark JD, Halpern ME. Characterization of Ca2+-dependent phospholipase A2 activity during zebrafish embryogenesis. The Journal of Biological Chemistry. 274: 19338-46. PMID 10383445 DOI: 10.1074/jbc.274.27.19338  1
1998 Sampath K, Rubinstein AL, Cheng AM, Liang JO, Fekany K, Solnica-Krezel L, Korzh V, Halpern ME, Wright CV. Induction of the zebrafish ventral brain and floorplate requires cyclops/nodal signalling. Nature. 395: 185-9. PMID 9744278 DOI: 10.1038/26020  1
1997 Miller-Bertoglio VE, Fisher S, Sánchez A, Mullins MC, Halpern ME. Differential regulation of chordin expression domains in mutant zebrafish. Developmental Biology. 192: 537-50. PMID 9441687 DOI: 10.1006/dbio.1997.8788  1
1997 Beattie CE, Hatta K, Halpern ME, Liu H, Eisen JS, Kimmel CB. Temporal separation in the specification of primary and secondary motoneurons in zebrafish. Developmental Biology. 187: 171-82. PMID 9242415 DOI: 10.1006/Dbio.1997.8604  1
1997 Halpern ME, Hatta K, Amacher SL, Talbot WS, Yan YL, Thisse B, Thisse C, Postlethwait JH, Kimmel CB. Genetic interactions in zebrafish midline development. Developmental Biology. 187: 154-70. PMID 9242414 DOI: 10.1006/Dbio.1997.8605  1
1997 Fisher S, Amacher SL, Halpern ME. Loss of cerebum function ventralizes the zebrafish embryo. Development (Cambridge, England). 124: 1301-11. PMID 9118801  1
1997 Halpern ME. Axial mesoderm and patterning of the zebrafish embryo1 American Zoologist. 37: 311-322. DOI: 10.1093/Icb/37.3.311  1
1997 Farber SA, Halpern ME. Developmental regulation of zebrafish annexins and cytosolic phospholipase A2 Faseb Journal. 11: A1349.  1
1995 Halpern ME, Thisse C, Ho RK, Thisse B, Riggleman B, Trevarrow B, Weinberg ES, Postlethwait JH, Kimmel CB. Cell-autonomous shift from axial to paraxial mesodermal development in zebrafish floating head mutants. Development (Cambridge, England). 121: 4257-64. PMID 8575325  1
1995 Talbot WS, Trevarrow B, Halpern ME, Melby AE, Farr G, Postlethwait JH, Jowett T, Kimmel CB, Kimelman D. A homeobox gene essential for zebrafish notochord development. Nature. 378: 150-7. PMID 7477317 DOI: 10.1038/378150A0  1
1994 Thisse C, Thisse B, Halpern ME, Postlethwait JH. Goosecoid expression in neurectoderm and mesendoderm is disrupted in zebrafish cyclops gastrulas. Developmental Biology. 164: 420-9. PMID 8045345 DOI: 10.1006/dbio.1994.1212  1
1994 Schulte-Merker S, van Eeden FJ, Halpern ME, Kimmel CB, Nüsslein-Volhard C. no tail (ntl) is the zebrafish homologue of the mouse T (Brachyury) gene. Development (Cambridge, England). 120: 1009-15. PMID 7600949  1
1993 Halpern ME, Ho RK, Walker C, Kimmel CB. Induction of muscle pioneers and floor plate is distinguished by the zebrafish no tail mutation. Cell. 75: 99-111. PMID 8402905 DOI: 10.1016/S0092-8674(05)80087-X  1
1993 Keshishian H, Chiba A, Chang TN, Halfon MS, Harkins EW, Jarecki J, Wang L, Anderson M, Cash S, Halpern ME. Cellular mechanisms governing synaptic development in Drosophila melanogaster. Journal of Neurobiology. 24: 757-87. PMID 8251016 DOI: 10.1002/Neu.480240606  1
1991 Halpern ME, Chiba A, Johansen J, Keshishian H. Growth cone behavior underlying the development of stereotypic synaptic connections in Drosophila embryos. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 11: 3227-38. PMID 1658247 DOI: 10.1523/Jneurosci.11-10-03227.1991  1
1989 Johansen J, Halpern ME, Johansen KM, Keshishian H. Stereotypic morphology of glutamatergic synapses on identified muscle cells of Drosophila larvae. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 9: 710-25. PMID 2563766 DOI: 10.1523/Jneurosci.09-02-00710.1989  1
1989 Johansen J, Halpern ME, Keshishian H. Axonal guidance and the development of muscle fiber-specific innervation in Drosophila embryos. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 9: 4318-32. PMID 2512376 DOI: 10.1523/Jneurosci.09-12-04318.1989  1
1988 Anderson MS, Halpern ME, Keshishian H. Identification of the neuropeptide transmitter proctolin in Drosophila larvae: characterization of muscle fiber-specific neuromuscular endings. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 8: 242-55. PMID 2892897 DOI: 10.1523/Jneurosci.08-01-00242.1988  1
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