Michael S. Barker, Ph.D.

Affiliations:

Ecology & Evolutionary Biology

University of Arizona, Tucson, AZ

Area:

Plant evolutionary genomics

Website:

http://barkerlab.net

Google:

"Michael Barker"

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Parents

R. James Hickey	grad student	2001-2003	Miami University
Gerald J. Gastony	grad student	2004-2009	Indiana University
(Paleopolyploidy and the evolution of plants.)
Loren H. Rieseberg	grad student	2004-2009	Indiana University
(Paleopolyploidy and the evolution of plants.)
Sarah (Sally) P. Otto	post-doc	2009-2010	UBC

Children

Geoffrey Finch	grad student	2019-	University of Arizona
Michael McKibben	grad student	2019-	University of Arizona
Qiuyu Jiang	grad student	2021-	University of Arizona
Seongyeon Kang	grad student	2022-	University of Arizona
Alex Stewart	grad student	2023-	University of Arizona
Hanghui Kong	grad student	2013-2014	University of Arizona
Elton Assis	grad student	2014-2015	University of Arizona
Stacy Jorgensen	grad student	2014-2016	University of Arizona
Rongpei Yu	grad student	2016-2017	University of Arizona
Anthony Baniaga	grad student	2012-2019	University of Arizona
Zheng Li	grad student	2013-2020	University of Arizona
Andrew Vizzerra	grad student	2020-2022	University of Arizona
Jay K. Goldberg	post-doc		University of Arizona
Justin Conover	post-doc	2022-	University of Arizona
Sylvia Kinosian	post-doc	2022-	University of Arizona
Nils Arrigo	post-doc	2010-2012	University of Lausanne
Rebecca Rundell	post-doc	2011-2012	SUNY ESF
Emily Sessa	post-doc	2012-2013	UF Gainesville
Patrick Edger	post-doc	2012-2015	University of Arizona (Plant Biology Tree)
Xinshuai Qi	post-doc	2014-2017	University of Arizona
Hannah Marx	post-doc	2016-2018	University of Arizona
Paul Blischak	post-doc	2018-2020	University of Arizona
Brittany L. Sutherland	post-doc	2018-2020	University of Arizona

Collaborators

BETA: Related publications

Publications

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Goldberg JK, Olcerst A, McKibben M, et al. (2024) A de novo long-read genome assembly of the sacred datura plant (Datura wrightii) reveals a role of tandem gene duplications in the evolution of herbivore-defense response. Bmc Genomics. 25: 15
Mabry ME, Abrahams RS, Al-Shehbaz IA, et al. (2023) Complementing model species with model clades. The Plant Cell
Sessa EB, Masalia RR, Arrigo N, et al. (2023) GOgetter: A pipeline for summarizing and visualizing GO slim annotations for plant genetic data. Applications in Plant Sciences. 11: e11536
Blischak PD, Sajan M, Barker MS, et al. (2023) Demographic History Inference and the Polyploid Continuum. Genetics
McKibben MTW, Barker MS. (2023) Applying Machine Learning to Classify the Origins of Gene Duplications. Methods in Molecular Biology (Clifton, N.J.). 2545: 91-119
Marchant DB, Chen G, Cai S, et al. (2022) Dynamic genome evolution in a model fern. Nature Plants
Heckenhauer J, Frandsen PB, Sproul JS, et al. (2022) Genome size evolution in the diverse insect order Trichoptera. Gigascience. 11
Jarvis DE, Maughan PJ, DeTemple J, et al. (2022) Chromosome-scale genome assembly of Gilia yorkii enables genetic mapping of floral traits in an inter-species cross. Genome Biology and Evolution
Wickell D, Kuo LY, Yang HP, et al. (2021) Underwater CAM photosynthesis elucidated by Isoetes genome. Nature Communications. 12: 6348
Bayer PE, Scheben A, Golicz AA, et al. (2021) Modelling of gene loss propensity in the pangenomes of three Brassica species suggests different mechanisms between polyploids and diploids. Plant Biotechnology Journal