Kambiz Nassirpour Alavian - Publications

Harvard Medical School, Boston, MA, United States 

41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Jonas E, Mnatsakanyan N, Alavian KN, Chen R. Mitochondrial (ATP Synthase) Permeability Transition Pore Biophysical Journal. 118. DOI: 10.1016/J.Bpj.2019.11.269  1
2019 Fang Y, Liu C, Lin J, Li X, Alavian KN, Yang Y, Niu Y. PhySpeTree: an automated pipeline for reconstructing phylogenetic species trees. Bmc Evolutionary Biology. 19: 219. PMID 31791235 DOI: 10.1186/s12862-019-1541-x  1
2019 Chen R, Park HA, Mnatsakanyan N, Niu Y, Licznerski P, Wu J, Miranda P, Graham M, Tang J, Boon AJW, Cossu G, Mandemakers W, Bonifati V, Smith PJS, Alavian KN, et al. Parkinson's disease protein DJ-1 regulates ATP synthase protein components to increase neuronal process outgrowth. Cell Death & Disease. 10: 469. PMID 31197129 DOI: 10.1038/S41419-019-1679-X  1
2019 Weinert M, Millet A, Jonas EA, Alavian KN. The mitochondrial metabolic function of is modulated by . Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. fj201802754R. PMID 31034784 DOI: 10.1096/fj.201802754R  1
2019 Mallach A, Weinert M, Arthur J, Gveric D, Tierney TS, Alavian KN. Post mortem examination of Parkinson's disease brains suggests decline in mitochondrial biomass, reversed by deep brain stimulation of subthalamic nucleus. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. fj201802628R. PMID 30862197 DOI: 10.1096/fj.201802628R  1
2017 Niu Y, Moghimyfiroozabad S, Safaie S, Yang Y, Jonas EA, Alavian KN. Phylogenetic Profiling of Mitochondrial Proteins and Integration Analysis of Bacterial Transcription Units Suggest Evolution of F1Fo ATP Synthase from Multiple Modules. Journal of Molecular Evolution. 85: 219-233. PMID 29177973 DOI: 10.1007/s00239-017-9819-3  1
2017 Niu Y, Liu C, Moghimyfiroozabad S, Yang Y, Alavian KN. PrePhyloPro: phylogenetic profile-based prediction of whole proteome linkages. Peerj. 5: e3712. PMID 28875072 DOI: 10.7717/peerj.3712  1
2017 Park HA, Licznerski P, Mnatsakanyan N, Niu Y, Sacchetti S, Wu J, Polster BM, Alavian KN, Jonas EA. Inhibition of Bcl-xL prevents pro-death actions of ΔN-Bcl-xL at the mitochondrial inner membrane during glutamate excitotoxicity. Cell Death and Differentiation. PMID 28777375 DOI: 10.1038/Cdd.2017.123  1
2016 Beutner G, Alavian KN, Jonas EA, Porter GA. Erratum to: The Mitochondrial Permeability Transition Pore and ATP Synthase. Handbook of Experimental Pharmacology. PMID 27913888 DOI: 10.1007/164_2016_87  1
2016 Mnatsakanyan N, Beutner G, Porter GA, Alavian KN, Jonas EA. Physiological roles of the mitochondrial permeability transition pore. Journal of Bioenergetics and Biomembranes. PMID 26868013 DOI: 10.1007/s10863-016-9652-1  1
2015 Licznerski P, Duric V, Banasr M, Alavian KN, Ota KT, Kang HJ, Jonas EA, Ursano R, Krystal JH, Duman RS. Decreased SGK1 Expression and Function Contributes to Behavioral Deficits Induced by Traumatic Stress. Plos Biology. 13: e1002282. PMID 26506154 DOI: 10.1371/Journal.Pbio.1002282  1
2015 Jonas EA, Porter GA, Beutner G, Mnatsakanyan N, Alavian KN. Cell death disguised: The mitochondrial permeability transition pore as the c-subunit of the F1FO ATP synthase. Pharmacological Research : the Official Journal of the Italian Pharmacological Society. PMID 25956324 DOI: 10.1016/j.phrs.2015.04.013  1
2015 Selvakumar T, Alavian KN, Tierney T. Analysis of gene expression changes in the rat hippocampus after deep brain stimulation of the anterior thalamic nucleus. Journal of Visualized Experiments : Jove. PMID 25867749 DOI: 10.3791/52457  1
2015 Cotroneo E, Ashek A, Wang L, Wharton J, Dubois O, Bozorgi S, Busbridge M, Alavian KN, Wilkins MR, Zhao L. Iron homeostasis and pulmonary hypertension: iron deficiency leads to pulmonary vascular remodeling in the rat. Circulation Research. 116: 1680-90. PMID 25767292 DOI: 10.1161/CIRCRESAHA.116.305265  1
2015 Weinert M, Selvakumar T, Tierney TS, Alavian KN. Isolation, culture and long-term maintenance of primary mesencephalic dopaminergic neurons from embryonic rodent brains. Journal of Visualized Experiments : Jove. PMID 25741798 DOI: 10.3791/52475  1
2015 Alavian KN, Dworetzky SI, Bonanni L, Zhang P, Sacchetti S, Li H, Signore AP, Smith PJ, Gribkoff VK, Jonas EA. The mitochondrial complex V-associated large-conductance inner membrane current is regulated by cyclosporine and dexpramipexole. Molecular Pharmacology. 87: 1-8. PMID 25332381 DOI: 10.1124/Mol.114.095661  1
2015 Park HA, Licznerski P, Alavian KN, Shanabrough M, Jonas EA. Bcl-xL is necessary for neurite outgrowth in hippocampal neurons. Antioxidants & Redox Signaling. 22: 93-108. PMID 24787232 DOI: 10.1089/Ars.2013.5570  1
2014 Jonas EA, Porter GA, Alavian KN. Bcl-xL in neuroprotection and plasticity. Frontiers in Physiology. 5: 355. PMID 25278904 DOI: 10.3389/fphys.2014.00355  1
2014 Alavian KN, Beutner G, Lazrove E, Sacchetti S, Park HA, Licznerski P, Li H, Nabili P, Hockensmith K, Graham M, Porter GA, Jonas EA. An uncoupling channel within the c-subunit ring of the F1FO ATP synthase is the mitochondrial permeability transition pore. Proceedings of the National Academy of Sciences of the United States of America. 111: 10580-5. PMID 24979777 DOI: 10.1073/Pnas.1401591111  1
2014 Alavian KN, Jeddi S, Naghipour SI, Nabili P, Licznerski P, Tierney TS. The lifelong maintenance of mesencephalic dopaminergic neurons by Nurr1 and engrailed. Journal of Biomedical Science. 21: 27. PMID 24685177 DOI: 10.1186/1423-0127-21-27  1
2014 Jonas E, Sacchetti S, Park H, Lazrove E, Beutner G, Porter GA, Alavian KN. The C-Subunit of the ATP Synthase Forms the Pore of the PTP Biophysical Journal. 106: 3. DOI: 10.1016/J.Bpj.2013.11.049  1
2013 Li H, Alavian KN, Lazrove E, Mehta N, Jones A, Zhang P, Licznerski P, Graham M, Uo T, Guo J, Rahner C, Duman RS, Morrison RS, Jonas EA. A Bcl-xL-Drp1 complex regulates synaptic vesicle membrane dynamics during endocytosis. Nature Cell Biology. 15: 773-85. PMID 23792689 DOI: 10.1038/Ncb2791  1
2013 Sacchetti S, Alavian KN, Lazrove E, Jonas EA. F1FO ATPase vesicle preparation and technique for performing patch clamp recordings of submitochondrial vesicle membranes. Journal of Visualized Experiments : Jove. e4394. PMID 23685483 DOI: 10.3791/4394  1
2013 Jonas EA, Lazrove E, Nabili P, Alavian KN. DJ1 regulates Neuronal Mitochondrial Bioenergetic Efficiency Biophysical Journal. 104. DOI: 10.1016/J.Bpj.2012.11.3628  1
2012 Gray JP, Alavian KN, Jonas EA, Heart EA. NAD kinase regulates the size of the NADPH pool and insulin secretion in pancreatic β-cells. American Journal of Physiology. Endocrinology and Metabolism. 303: E191-9. PMID 22550069 DOI: 10.1152/ajpendo.00465.2011  1
2012 Ofengeim D, Chen YB, Miyawaki T, Li H, Sacchetti S, Flannery RJ, Alavian KN, Pontarelli F, Roelofs BA, Hickman JA, Hardwick JM, Zukin RS, Jonas EA. N-terminally cleaved Bcl-xL mediates ischemia-induced neuronal death. Nature Neuroscience. 15: 574-80. PMID 22366758 DOI: 10.1038/Nn.3054  1
2012 Alavian KN, Dworetzky SI, Bonanni L, Zhang P, Sacchetti S, Mariggio MA, Onofrj M, Thomas A, Li H, Mangold JE, Signore AP, Demarco U, Demady DR, Nabili P, Lazrove E, et al. Effects of dexpramipexole on brain mitochondrial conductances and cellular bioenergetic efficiency. Brain Research. 1446: 1-11. PMID 22364637 DOI: 10.1016/J.Brainres.2012.01.046  1
2012 Alavian KN, Lazrove E, Nabili P, Li H, Jonas EA. The C-Subunit Ring of the F1FO ATP Synthase Constitutes a Leak Channel that Regulates Cellular Metabolic Efficiency by Counteracting the H+ Translocator Biophysical Journal. 102: 571. DOI: 10.1016/J.Bpj.2011.11.3110  1
2011 Chen YB, Aon MA, Hsu YT, Soane L, Teng X, McCaffery JM, Cheng WC, Qi B, Li H, Alavian KN, Dayhoff-Brannigan M, Zou S, Pineda FJ, O'Rourke B, Ko YH, et al. Bcl-xL regulates mitochondrial energetics by stabilizing the inner membrane potential. The Journal of Cell Biology. 195: 263-76. PMID 21987637 DOI: 10.1083/Jcb.201108059  1
2011 Alavian KN, Li H, Collis L, Bonanni L, Zeng L, Sacchetti S, Lazrove E, Nabili P, Flaherty B, Graham M, Chen Y, Messerli SM, Mariggio MA, Rahner C, McNay E, et al. Bcl-xL regulates metabolic efficiency of neurons through interaction with the mitochondrial F1FO ATP synthase. Nature Cell Biology. 13: 1224-33. PMID 21926988 DOI: 10.1038/Ncb2330  1
2011 Sanchez CE, Tierney TS, Gale JT, Alavian KN, Sahin A, Lee JS, Mulligan RC, Carter BS. Recombinant adeno-associated virus type 2 pseudotypes: comparing safety, specificity, and transduction efficiency in the primate striatum. Laboratory investigation. Journal of Neurosurgery. 114: 672-80. PMID 20950087 DOI: 10.3171/2010.8.Jns091583  1
2011 Alavian KN, Li H, Collis L, Bonanni L, Zeng L, Sacchetti S, Lazrove E, Nabili P, Flaherty B, Graham M, Chen Y, Messerli SM, Mariggio MA, Rahner C, McNay E, et al. Bcl-x L regulates metabolic efficiency of neurons through interaction with the mitochondrial F 1 F O ATP synthase Nature Cell Biology. 13: 1383. DOI: 10.1038/ncb2369  1
2010 Vahedi S, Rajabian M, Misaghian A, Grbec D, Simon HH, Alavian KN. Parkinson's disease candidate gene prioritization based on expression profile of midbrain dopaminergic neurons. Journal of Biomedical Science. 17: 66. PMID 20716345 DOI: 10.1186/1423-0127-17-66  1
2010 Chung CY, Licznerski P, Alavian KN, Simeone A, Lin Z, Martin E, Vance J, Isacson O. The transcription factor orthodenticle homeobox 2 influences axonal projections and vulnerability of midbrain dopaminergic neurons. Brain : a Journal of Neurology. 133: 2022-31. PMID 20573704 DOI: 10.1093/Brain/Awq142  1
2009 Simon HH, Alavian KN. Transcriptional regulation of their survival: the Engrailed homeobox genes. Advances in Experimental Medicine and Biology. 651: 66-72. PMID 19731551 DOI: 10.1007/978-1-4419-0322-8_6  1
2009 Pruszak J, Ludwig W, Blak A, Alavian K, Isacson O. CD15, CD24, and CD29 define a surface biomarker code for neural lineage differentiation of stem cells. Stem Cells (Dayton, Ohio). 27: 2928-40. PMID 19725119 DOI: 10.1002/stem.211  1
2009 Alavian KN, Sgadò P, Alberi L, Subramaniam S, Simon HH. Elevated P75NTR expression causes death of engrailed-deficient midbrain dopaminergic neurons by Erk1/2 suppression. Neural Development. 4: 11. PMID 19291307 DOI: 10.1186/1749-8104-4-11  1
2009 Alavian KN, Simon HH. Linkage of cDNA expression profiles of mesencephalic dopaminergic neurons to a genome-wide in situ hybridization database. Molecular Neurodegeneration. 4: 6. PMID 19178742 DOI: 10.1186/1750-1326-4-6  1
2008 Alavian KN, Scholz C, Simon HH. Transcriptional regulation of mesencephalic dopaminergic neurons: the full circle of life and death. Movement Disorders : Official Journal of the Movement Disorder Society. 23: 319-28. PMID 18044702 DOI: 10.1002/mds.21640  1
2006 Sgadò P, Albéri L, Gherbassi D, Galasso SL, Ramakers GM, Alavian KN, Smidt MP, Dyck RH, Simon HH. Slow progressive degeneration of nigral dopaminergic neurons in postnatal Engrailed mutant mice. Proceedings of the National Academy of Sciences of the United States of America. 103: 15242-7. PMID 17015829 DOI: 10.1073/pnas.0602116103  1
2004 Thuret S, Alavian KN, Gassmann M, Lloyd CK, Smits SM, Smidt MP, Klein R, Dyck RH, Simon HH. The neuregulin receptor, ErbB4, is not required for normal development and adult maintenance of the substantia nigra pars compacta. Journal of Neurochemistry. 91: 1302-11. PMID 15584907 DOI: 10.1111/j.1471-4159.2004.02809.x  1
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