| Year |
Citation |
Score |
| 2023 |
Sun J, Zhang C, Gao F, Stathopoulos A. Single-cell transcriptomics illuminates regulatory steps driving anterior-posterior patterning of Drosophila embryonic mesoderm. Cell Reports. 42: 113289. PMID 37858470 DOI: 10.1016/j.celrep.2023.113289 |
0.431 |
|
| 2022 |
Macabenta F, Sun HT, Stathopoulos A. BMP-gated cell-cycle progression drives anoikis during mesenchymal collective migration. Developmental Cell. PMID 35709766 DOI: 10.1016/j.devcel.2022.05.017 |
0.813 |
|
| 2022 |
Dunipace L, Newcomb S, Stathopoulos A. brinker levels regulated by a promoter proximal element support germ cell homeostasis. Development (Cambridge, England). PMID 35037688 DOI: 10.1242/dev.199890 |
0.764 |
|
| 2021 |
Stevens LM, Kim G, Koromila T, Steele JW, McGehee J, Stathopoulos A, Stein DS. Light-dependent N-end rule-mediated disruption of protein function in Saccharomyces cerevisiae and Drosophila melanogaster. Plos Genetics. 17: e1009544. PMID 33999957 DOI: 10.1371/journal.pgen.1009544 |
0.757 |
|
| 2021 |
Irizarry J, Stathopoulos A. Dynamic patterning by morphogens illuminated by cis-regulatory studies. Development (Cambridge, England). 148. PMID 33472851 DOI: 10.1242/dev.196113 |
0.779 |
|
| 2020 |
Sun J, Macabenta F, Akos Z, Stathopoulos A. Collective Migrations of Drosophila Embryonic Trunk and Caudal Mesoderm-Derived Muscle Precursor Cells. Genetics. 215: 297-322. PMID 33954510 DOI: 10.1534/genetics.120.303258 |
0.397 |
|
| 2020 |
Koromila T, Gao F, Iwasaki Y, He P, Pachter L, Gergen JP, Stathopoulos A. Odd-paired is a pioneer-like factor that coordinates with Zelda to control gene expression in embryos. Elife. 9. PMID 32701060 DOI: 10.7554/Elife.59610 |
0.502 |
|
| 2020 |
Stepanik V, Sun J, Stathopoulos A. FGF Pyramus Has a Transmembrane Domain and Cell-Autonomous Function in Polarity. Current Biology : Cb. PMID 32619487 DOI: 10.1016/J.Cub.2020.06.006 |
0.791 |
|
| 2020 |
Sun J, Macabenta F, Akos Z, Stathopoulos A. Collective Migrations of Embryonic Trunk and Caudal Mesoderm-Derived Muscle Precursor Cells. Genetics. 215: 297-322. PMID 32487692 DOI: 10.1534/Genetics.120.303258 |
0.808 |
|
| 2020 |
Irizarry J, McGehee J, Kim G, Stein D, Stathopoulos A. Twist-dependent ratchet functioning downstream from Dorsal revealed using a light-inducible degron. Genes & Development. PMID 32467225 DOI: 10.1101/Gad.338194.120 |
0.784 |
|
| 2020 |
Stathopoulos A, Newcomb S. Setting up for gastrulation: D. melanogaster. Current Topics in Developmental Biology. 136: 3-32. PMID 31959292 DOI: 10.1016/Bs.Ctdb.2019.11.004 |
0.78 |
|
| 2020 |
Koromila T, Gao F, Iwasaki Y, He P, Pachter L, Gergen JP, Stathopoulos A. Author response: Odd-paired is a pioneer-like factor that coordinates with Zelda to control gene expression in embryos Elife. DOI: 10.7554/Elife.59610.Sa2 |
0.419 |
|
| 2019 |
Dunipace L, Ákos Z, Stathopoulos A. Coacting enhancers can have complementary functions within gene regulatory networks and promote canalization. Plos Genetics. 15: e1008525. PMID 31830033 DOI: 10.1371/Journal.Pgen.1008525 |
0.48 |
|
| 2019 |
Macabenta F, Stathopoulos A. Sticking to a plan: adhesion and signaling control spatial organization of cells within migrating collectives. Current Opinion in Genetics & Development. 57: 39-46. PMID 31404788 DOI: 10.1016/J.Gde.2019.07.003 |
0.796 |
|
| 2019 |
Koromila T, Stathopoulos A. Distinct Roles of Broadly Expressed Repressors Support Dynamic Enhancer Action and Change in Time. Cell Reports. 28: 855-863.e5. PMID 31340149 DOI: 10.1016/J.Celrep.2019.06.063 |
0.489 |
|
| 2019 |
Macabenta F, Stathopoulos A. Migrating cells control morphogenesis of substratum serving as track to promote directional movement of the collective. Development (Cambridge, England). PMID 31239242 DOI: 10.1242/Dev.177295 |
0.814 |
|
| 2018 |
Sandler JE, Irizarry J, Stepanik V, Dunipace L, Amrhein H, Stathopoulos A. A Developmental Program Truncates Long Transcripts to Temporally Regulate Cell Signaling. Developmental Cell. 47: 773-784.e6. PMID 30562515 DOI: 10.1016/J.Devcel.2018.11.019 |
0.8 |
|
| 2018 |
Sun J, Stathopoulos A. FGF controls epithelial-mesenchymal transitions during gastrulation by regulating cell division and apicobasal polarity. Development (Cambridge, England). PMID 30190277 DOI: 10.1242/Dev.161927 |
0.462 |
|
| 2017 |
Koromila T, Stathopoulos A. Broadly expressed repressors integrate patterning across orthogonal axes in embryos. Proceedings of the National Academy of Sciences of the United States of America. PMID 28720706 DOI: 10.1073/Pnas.1703001114 |
0.484 |
|
| 2017 |
Bae YK, Macabenta F, Curtis HL, Stathopoulos A. Comparative analysis of gene expression profiles for several migrating cell types identifies cell migration regulators. Mechanisms of Development. PMID 28428068 DOI: 10.1016/J.Mod.2017.04.004 |
0.818 |
|
| 2016 |
Stepanik V, Dunipace L, Bae YK, Macabenta F, Sun J, Trisnadi N, Stathopoulos A. The migrations of Drosophila muscle founders and primordial germ cells are interdependent. Development (Cambridge, England). 143: 3206-15. PMID 27578182 DOI: 10.1242/Dev.134346 |
0.768 |
|
| 2016 |
Sandler JE, Stathopoulos A. Stepwise Progression of Embryonic Patterning. Trends in Genetics : Tig. PMID 27230753 DOI: 10.1016/J.Tig.2016.04.004 |
0.53 |
|
| 2016 |
Sandler JE, Stathopoulos A. Quantitative Single-Embryo Profile of Drosophila Genome Activation and the Dorsal-Ventral Patterning Network. Genetics. PMID 26896327 DOI: 10.1534/Genetics.116.186783 |
0.511 |
|
| 2015 |
Irizarry J, Stathopoulos A. FGF signaling supports Drosophila fertility by regulating development of ovarian muscle tissues. Developmental Biology. 404: 1-13. PMID 25958090 DOI: 10.1016/J.Ydbio.2015.04.023 |
0.793 |
|
| 2015 |
Trisnadi N, Stathopoulos A. Ectopic expression screen identifies genes affecting Drosophila mesoderm development including the HSPG Trol. G3 (Bethesda, Md.). 5: 301-13. PMID 25538103 DOI: 10.1534/G3.114.015891 |
0.532 |
|
| 2014 |
Ozdemir A, Ma L, White KP, Stathopoulos A. Su(H)-mediated repression positions gene boundaries along the dorsal-ventral axis of Drosophila embryos. Developmental Cell. 31: 100-13. PMID 25313963 DOI: 10.1016/J.Devcel.2014.08.005 |
0.478 |
|
| 2013 |
Stathopoulos A, Iber D. Studies of morphogens: keep calm and carry on. Development (Cambridge, England). 140: 4119-24. PMID 24086076 DOI: 10.1242/Dev.095141 |
0.393 |
|
| 2013 |
Dunipace L, Saunders A, Ashe H, Stathopoulos A. Autoregulatory feedback controls sequential action of cis-regulatory modules at the brinker locus Developmental Cell. 26: 536-543. PMID 24044892 DOI: 10.1016/J.Devcel.2013.08.010 |
0.678 |
|
| 2013 |
Garcia M, Nahmad M, Reeves GT, Stathopoulos A. Size-dependent regulation of dorsal-ventral patterning in the early Drosophila embryo. Developmental Biology. 381: 286-99. PMID 23800450 DOI: 10.1016/J.Ydbio.2013.06.020 |
0.742 |
|
| 2013 |
Jin H, Stojnic R, Adryan B, Ozdemir A, Stathopoulos A, Frasch M. Genome-wide screens for in vivo Tinman binding sites identify cardiac enhancers with diverse functional architectures. Plos Genetics. 9: e1003195. PMID 23326246 DOI: 10.1371/Journal.Pgen.1003195 |
0.63 |
|
| 2013 |
Trisnadi N, Altinok A, Stathopoulos A, Reeves GT. Image analysis and empirical modeling of gene and protein expression. Methods (San Diego, Calif.). 62: 68-78. PMID 23104159 DOI: 10.1016/J.Ymeth.2012.09.016 |
0.729 |
|
| 2012 |
Bae YK, Trisnadi N, Kadam S, Stathopoulos A. The role of FGF signaling in guiding coordinate movement of cell groups: guidance cue and cell adhesion regulator? Cell Adhesion & Migration. 6: 397-403. PMID 23076054 DOI: 10.4161/Cam.21103 |
0.492 |
|
| 2012 |
Reeves GT, Trisnadi N, Truong TV, Nahmad M, Katz S, Stathopoulos A. Dorsal-ventral gene expression in the Drosophila embryo reflects the dynamics and precision of the dorsal nuclear gradient. Developmental Cell. 22: 544-57. PMID 22342544 DOI: 10.1016/J.Devcel.2011.12.007 |
0.761 |
|
| 2012 |
Kadam S, Ghosh S, Stathopoulos A. Synchronous and symmetric migration of Drosophila caudal visceral mesoderm cells requires dual input by two FGF ligands. Development (Cambridge, England). 139: 699-708. PMID 22219352 DOI: 10.1242/Dev.068791 |
0.488 |
|
| 2011 |
Garcia M, Stathopoulos A. Lateral gene expression in Drosophila early embryos is supported by Grainyhead-mediated activation and tiers of dorsally-localized repression. Plos One. 6: e29172. PMID 22216201 DOI: 10.1371/Journal.Pone.0029172 |
0.476 |
|
| 2011 |
Ozdemir A, Stathopoulos A. Exciting times: bountiful data to facilitate studies of cis-regulatory control. Nature Methods. 8: 1016-7. PMID 22127218 DOI: 10.1038/Nmeth.1795 |
0.353 |
|
| 2011 |
Dunipace L, Ozdemir A, Stathopoulos A. Complex interactions between cis-regulatory modules in native conformation are critical for Drosophila snail expression. Development (Cambridge, England). 138: 4075-84. PMID 21813571 DOI: 10.1242/Dev.069146 |
0.457 |
|
| 2011 |
Ozdemir A, Fisher-Aylor KI, Pepke S, Samanta M, Dunipace L, McCue K, Zeng L, Ogawa N, Wold BJ, Stathopoulos A. High resolution mapping of Twist to DNA in Drosophila embryos: Efficient functional analysis and evolutionary conservation. Genome Research. 21: 566-77. PMID 21383317 DOI: 10.1101/Gr.104018.109 |
0.419 |
|
| 2011 |
Nahmad M, Reeves G, Stathopoulos A. Program/Abstract # 44Size-dependent regulation of dorsal-ventral patterning in the early Drosophila embryo Developmental Biology. 356. DOI: 10.1016/J.Ydbio.2011.05.061 |
0.712 |
|
| 2010 |
Tulin S, Stathopoulos A. Extending the family table: Insights from beyond vertebrates into the regulation of embryonic development by FGFs. Birth Defects Research. Part C, Embryo Today : Reviews. 90: 214-27. PMID 20860061 DOI: 10.1002/Bdrc.20182 |
0.791 |
|
| 2010 |
Nahmad M, Stathopoulos A. Establishing positional information through gradient dynamics: a lesson from the Hedgehog signaling pathway. Fly. 4: 273-7. PMID 20699656 DOI: 10.4161/Fly.4.4.12677 |
0.446 |
|
| 2010 |
Tulin S, Stathopoulos A. Analysis of Thisbe and Pyramus functional domains reveals evidence for cleavage of Drosophila FGFs. Bmc Developmental Biology. 10: 83. PMID 20687959 DOI: 10.1186/1471-213X-10-83 |
0.791 |
|
| 2010 |
McMahon A, Reeves GT, Supatto W, Stathopoulos A. Mesoderm migration in Drosophila is a multi-step process requiring FGF signaling and integrin activity. Development (Cambridge, England). 137: 2167-75. PMID 20530544 DOI: 10.1242/Dev.051573 |
0.734 |
|
| 2009 |
Reeves GT, Stathopoulos A. Graded dorsal and differential gene regulation in the Drosophila embryo. Cold Spring Harbor Perspectives in Biology. 1: a000836. PMID 20066095 DOI: 10.1101/Cshperspect.A000836 |
0.759 |
|
| 2009 |
Liberman LM, Reeves GT, Stathopoulos A. Quantitative imaging of the Dorsal nuclear gradient reveals limitations to threshold-dependent patterning in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 106: 22317-22. PMID 20018754 DOI: 10.1073/Pnas.0906227106 |
0.752 |
|
| 2009 |
Nahmad M, Stathopoulos A. Dynamic interpretation of hedgehog signaling in the Drosophila wing disc. Plos Biology. 7: e1000202. PMID 19787036 DOI: 10.1371/Journal.Pbio.1000202 |
0.491 |
|
| 2009 |
Supatto W, McMahon A, Fraser SE, Stathopoulos A. Quantitative imaging of collective cell migration during Drosophila gastrulation: multiphoton microscopy and computational analysis. Nature Protocols. 4: 1397-412. PMID 19745822 DOI: 10.1038/Nprot.2009.130 |
0.347 |
|
| 2009 |
Kadam S, McMahon A, Tzou P, Stathopoulos A. FGF ligands in Drosophila have distinct activities required to support cell migration and differentiation. Development (Cambridge, England). 136: 739-47. PMID 19158183 DOI: 10.1242/Dev.027904 |
0.44 |
|
| 2009 |
Liberman LM, Stathopoulos A. Design flexibility in cis-regulatory control of gene expression: synthetic and comparative evidence. Developmental Biology. 327: 578-89. PMID 19135437 DOI: 10.1016/j.ydbio.2008.12.020 |
0.419 |
|
| 2008 |
McMahon A, Supatto W, Fraser SE, Stathopoulos A. Dynamic analyses of Drosophila gastrulation provide insights into collective cell migration. Science (New York, N.Y.). 322: 1546-50. PMID 19056986 DOI: 10.1126/Science.1167094 |
0.473 |
|
| 2005 |
Stathopoulos A, Levine M. Genomic regulatory networks and animal development. Developmental Cell. 9: 449-62. PMID 16198288 DOI: 10.1016/J.Devcel.2005.09.005 |
0.539 |
|
| 2005 |
Stathopoulos A, Levine M. Localized repressors delineate the neurogenic ectoderm in the early Drosophila embryo. Developmental Biology. 280: 482-93. PMID 15882587 DOI: 10.1016/J.Ydbio.2005.02.003 |
0.606 |
|
| 2004 |
Stathopoulos A, Levine M. Whole-genome analysis of Drosophila gastrulation. Current Opinion in Genetics & Development. 14: 477-84. PMID 15380237 DOI: 10.1016/J.Gde.2004.07.004 |
0.593 |
|
| 2004 |
Markstein M, Zinzen R, Markstein P, Yee KP, Erives A, Stathopoulos A, Levine M. A regulatory code for neurogenic gene expression in the Drosophila embryo. Development (Cambridge, England). 131: 2387-94. PMID 15128669 DOI: 10.1242/Dev.01124 |
0.802 |
|
| 2004 |
Stathopoulos A, Tam B, Ronshaugen M, Frasch M, Levine M. pyramus and thisbe: FGF genes that pattern the mesoderm of Drosophila embryos. Genes & Development. 18: 687-99. PMID 15075295 DOI: 10.1101/Gad.1166404 |
0.827 |
|
| 2002 |
Stathopoulos A, Van Drenth M, Erives A, Markstein M, Levine M. Whole-genome analysis of dorsal-ventral patterning in the Drosophila embryo. Cell. 111: 687-701. PMID 12464180 DOI: 10.1016/S0092-8674(02)01087-5 |
0.812 |
|
| 2002 |
Stathopoulos A, Levine M. Whole-genome expression profiles identify gene batteries in Drosophila. Developmental Cell. 3: 464-5. PMID 12408796 DOI: 10.1016/S1534-5807(02)00300-3 |
0.537 |
|
| 2002 |
Calhoun VC, Stathopoulos A, Levine M. Promoter-proximal tethering elements regulate enhancer-promoter specificity in the Drosophila Antennapedia complex. Proceedings of the National Academy of Sciences of the United States of America. 99: 9243-7. PMID 12093913 DOI: 10.1073/Pnas.142291299 |
0.787 |
|
| 2002 |
Stathopoulos A, Levine M. Linear signaling in the Toll-Dorsal pathway of Drosophila: activated Pelle kinase specifies all threshold outputs of gene expression while the bHLH protein Twist specifies a subset. Development (Cambridge, England). 129: 3411-9. PMID 12091311 |
0.522 |
|
| 2002 |
Stathopoulos A, Levine M. Dorsal gradient networks in the Drosophila embryo. Developmental Biology. 246: 57-67. PMID 12027434 DOI: 10.1006/Dbio.2002.0652 |
0.624 |
|
| 1997 |
Stathopoulos AM, Cyert MS. Calcineurin acts through the CRZ1/TCN1-encoded transcription factor to regulate gene expression in yeast. Genes & Development. 11: 3432-44. PMID 9407035 DOI: 10.1101/Gad.11.24.3432 |
0.685 |
|
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