Ken Sugino, Ph.D. - Publications

Affiliations: 
2004 Brandeis University, Waltham, MA, United States 
Area:
Visual cortex

23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Sugino K, Clark E, Schulmann A, Shima Y, Wang L, Hunt DL, Hooks BM, Traenkner D, Chandrashekar J, Picard S, Lemire AL, Spruston N, Hantman AW, Nelson SB. Mapping the transcriptional diversity of genetically and anatomically defined cell populations in the mouse brain. Elife. 8. PMID 30977723 DOI: 10.7554/eLife.38619  1
2016 Steinmetz CC, Tatavarty V, Sugino K, Shima Y, Joseph A, Lin H, Rutlin M, Lambo M, Hempel CM, Okaty BW, Paradis S, Nelson SB, Turrigiano GG. Upregulation of μ3A Drives Homeostatic Plasticity by Rerouting AMPAR into the Recycling Endosomal Pathway. Cell Reports. PMID 27568566 DOI: 10.1016/j.celrep.2016.08.009  1
2016 Cembrowski MS, Wang L, Sugino K, Shields BC, Spruston N. Hipposeq: a comprehensive RNA-seq database of gene expression in hippocampal principal neurons. Elife. 5. PMID 27113915 DOI: 10.7554/eLife.14997  1
2016 Shima Y, Sugino K, Hempel C, Shima M, Taneja P, Bullis JB, Mehta S, Lois C, Nelson SB. A mammalian enhancer trap resource for discovering and manipulating neuronal cell types. Elife. 5. PMID 26999799 DOI: 10.7554/eLife.13503  1
2014 Sugino K, Hempel CM, Okaty BW, Arnson HA, Kato S, Dani VS, Nelson SB. Cell-type-specific repression by methyl-CpG-binding protein 2 is biased toward long genes. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 34: 12877-83. PMID 25232122 DOI: 10.1523/JNEUROSCI.2674-14.2014  1
2014 Tränkner D, Hahne N, Sugino K, Hoon MA, Zuker C. Population of sensory neurons essential for asthmatic hyperreactivity of inflamed airways. Proceedings of the National Academy of Sciences of the United States of America. 111: 11515-20. PMID 25049382 DOI: 10.1073/pnas.1411032111  1
2014 Grange P, Bohland JW, Okaty BW, Sugino K, Bokil H, Nelson SB, Ng L, Hawrylycz M, Mitra PP. Cell-type-based model explaining coexpression patterns of genes in the brain. Proceedings of the National Academy of Sciences of the United States of America. 111: 5397-402. PMID 24706869 DOI: 10.1073/pnas.1312098111  1
2013 Huang CC, Sugino K, Shima Y, Guo C, Bai S, Mensh BD, Nelson SB, Hantman AW. Convergence of pontine and proprioceptive streams onto multimodal cerebellar granule cells. Elife. 2: e00400. PMID 23467508 DOI: 10.7554/eLife.00400  1
2011 Boggio KJ, Obasuyi E, Sugino K, Nelson SB, Agar NY, Agar JN. Recent advances in single-cell MALDI mass spectrometry imaging and potential clinical impact. Expert Review of Proteomics. 8: 591-604. PMID 21999830 DOI: 10.1586/epr.11.53  1
2011 Taniguchi H, He M, Wu P, Kim S, Paik R, Sugino K, Kvitsiani D, Kvitsani D, Fu Y, Lu J, Lin Y, Miyoshi G, Shima Y, Fishell G, Nelson SB, et al. A resource of Cre driver lines for genetic targeting of GABAergic neurons in cerebral cortex. Neuron. 71: 995-1013. PMID 21943598 DOI: 10.1016/j.neuron.2011.07.026  1
2011 Okaty BW, Sugino K, Nelson SB. Cell type-specific transcriptomics in the brain. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 6939-43. PMID 21562254 DOI: 10.1523/JNEUROSCI.0626-11.2011  1
2011 Okaty BW, Sugino K, Nelson SB. A quantitative comparison of cell-type-specific microarray gene expression profiling methods in the mouse brain. Plos One. 6: e16493. PMID 21304595 DOI: 10.1371/journal.pone.0016493  1
2011 Taniguchi H, He M, Wu P, Kim S, Paik R, Sugino K, Kvitsiani D, Fu Y, Lu J, Lin Y, Miyoshi G, Shima Y, Fishell G, Nelson SB, Huang ZJ. A resource of cre driver lines for genetic targeting of GABAergic neurons in cerebral cortex Neuron. 72: 1091. DOI: 10.1016/j.neuron.2011.12.010  1
2010 Nagoshi E, Sugino K, Kula E, Okazaki E, Tachibana T, Nelson S, Rosbash M. Dissecting differential gene expression within the circadian neuronal circuit of Drosophila. Nature Neuroscience. 13: 60-8. PMID 19966839 DOI: 10.1038/nn.2451  1
2009 Kadener S, Menet JS, Sugino K, Horwich MD, Weissbein U, Nawathean P, Vagin VV, Zamore PD, Nelson SB, Rosbash M. A role for microRNAs in the Drosophila circadian clock. Genes & Development. 23: 2179-91. PMID 19696147 DOI: 10.1101/gad.1819509  1
2009 Okaty BW, Miller MN, Sugino K, Hempel CM, Nelson SB. Transcriptional and electrophysiological maturation of neocortical fast-spiking GABAergic interneurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 7040-52. PMID 19474331 DOI: 10.1523/JNEUROSCI.0105-09.2009  1
2009 Kadener S, Rodriguez J, Abruzzi KC, Khodor YL, Sugino K, Marr MT, Nelson S, Rosbash M. Genome-wide identification of targets of the drosha-pasha/DGCR8 complex. Rna (New York, N.Y.). 15: 537-45. PMID 19223442 DOI: 10.1261/rna.1319309  1
2007 Hempel CM, Sugino K, Nelson SB. A manual method for the purification of fluorescently labeled neurons from the mammalian brain. Nature Protocols. 2: 2924-9. PMID 18007629 DOI: 10.1038/nprot.2007.416  1
2006 Nelson SB, Hempel C, Sugino K. Probing the transcriptome of neuronal cell types. Current Opinion in Neurobiology. 16: 571-6. PMID 16962313 DOI: 10.1016/j.conb.2006.08.006  1
2006 Nelson SB, Sugino K, Hempel CM. The problem of neuronal cell types: a physiological genomics approach. Trends in Neurosciences. 29: 339-45. PMID 16714064 DOI: 10.1016/j.tins.2006.05.004  1
2006 Sugino K, Hempel CM, Miller MN, Hattox AM, Shapiro P, Wu C, Huang ZJ, Nelson SB. Molecular taxonomy of major neuronal classes in the adult mouse forebrain. Nature Neuroscience. 9: 99-107. PMID 16369481 DOI: 10.1038/nn1618  1
2003 Myme CI, Sugino K, Turrigiano GG, Nelson SB. The NMDA-to-AMPA ratio at synapses onto layer 2/3 pyramidal neurons is conserved across prefrontal and visual cortices. Journal of Neurophysiology. 90: 771-9. PMID 12672778 DOI: 10.1152/jn.00070.2003  1
2002 Hempel CM, Sugino K, Nelson SB. Multi-unit spike-triggered averaging: a method for probing the physiology of central synapses. Journal of Neuroscience Methods. 120: 121-9. PMID 12385762 DOI: 10.1016/S0165-0270(02)00190-5  1
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