James T. Neal, Ph.D. - Publications

Affiliations: 
2011 Biology University of Oregon, Eugene, OR, United States 

8/49 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Neal JT, Li X, Zhu J, Giangarra V, Grzeskowiak CL, Ju J, Liu IH, Chiou SH, Salahudeen AA, Smith AR, Deutsch BC, Liao L, Zemek AJ, Zhao F, Karlsson K, et al. Organoid Modeling of the Tumor Immune Microenvironment. Cell. 175: 1972-1988.e16. PMID 30550791 DOI: 10.1016/J.Cell.2018.11.021  0.303
2018 Salahudeen AA, Zhu J, Ju J, Batish A, Sutha K, Neal JT, Giangarra V, Montesclaros L, Sapida J, Sharifi O, Lee J, Zheng GX, Wagh DA, Coller JA, Neal JW, et al. Abstract 987: Organoid-based characterization of patient tumors and microenvironments at single cell resolution Cancer Research. 78: 987-987. DOI: 10.1158/1538-7445.Am2018-987  0.353
2014 Li X, Nadauld L, Ootani A, Corney DC, Pai RK, Gevaert O, Cantrell MA, Rack PG, Neal JT, Chan CWM, Yeung T, Gong X, Yuan J, Wilhelmy J, Robine S, et al. Oncogenic transformation of diverse gastrointestinal tissues in primary organoid culture Nature Medicine. 20: 769-777. PMID 24859528 DOI: 10.1038/Nm.3585  0.386
2013 Neal JT, Peterson TS, Kent ML, Guillemin K. H. pylori virulence factor CagA increases intestinal cell proliferation by Wnt pathway activation in a transgenic zebrafish model. Disease Models & Mechanisms. 6: 802-10. PMID 23471915 DOI: 10.1242/Dmm.011163  0.516
2013 Rosenbluh J, Nijhawan D, Cox AG, Li X, Neal JT, Schafer EJ, Zack TI, Wang X, Tsherniak A, Schinzel AC, Shao DD, Schumacher SE, Weir BA, Vazquez F, Cowley GS, et al. Erratum: β-catenin-driven cancers require a YAP1 transcriptional complex for survival and tumorigenesis (Cell (2012) 151 (1457-1473)) Cell. 153: 267-270. DOI: 10.1016/J.Cell.2013.03.007  0.462
2012 Rosenbluh J, Nijhawan D, Cox AG, Li X, Neal JT, Schafer EJ, Zack TI, Wang X, Tsherniak A, Schinzel AC, Shao DD, Schumacher SE, Weir BA, Vazquez F, Cowley GS, et al. β-Catenin-driven cancers require a YAP1 transcriptional complex for survival and tumorigenesis. Cell. 151: 1457-73. PMID 23245941 DOI: 10.1016/J.Cell.2012.11.026  0.449
2012 Reid DW, Muyskens JB, Neal JT, Gaddini GW, Cho LY, Wandler AM, Botham CM, Guillemin K. Identification of genetic modifiers of CagA-induced epithelial disruption in Drosophila. Frontiers in Cellular and Infection Microbiology. 2: 24. PMID 22919616 DOI: 10.3389/Fcimb.2012.00024  0.419
2011 Cheesman SE, Neal JT, Mittge E, Seredick BM, Guillemin K. Epithelial cell proliferation in the developing zebrafish intestine is regulated by the Wnt pathway and microbial signaling via Myd88. Proceedings of the National Academy of Sciences of the United States of America. 108: 4570-7. PMID 20921418 DOI: 10.1073/Pnas.1000072107  0.349
Low-probability matches (unlikely to be authored by this person)
2016 Neal JT, Kuo CJ. Organoids as Models for Neoplastic Transformation. Annual Review of Pathology. PMID 26907527 DOI: 10.1146/Annurev-Pathol-012615-044249  0.294
2014 Neal JT, Cantrell M, Rack P, Kuo CJ. Abstract LB-34: 3-Dimensional air-liquid interface organoid culture of primary human tumor biopsies Cancer Research. 74. DOI: 10.1158/1538-7445.Am2014-Lb-34  0.293
2020 Nayar U, Piccioni F, Yang X, Root D, Neal JT, Eli LD, Diala I, Lalani AS, Wagle N. Abstract 1914: Phenotypic characterization of a comprehensive set of HER2 missense mutants in ER+ breast cancer Cancer Research. 80: 1914-1914. DOI: 10.1158/1538-7445.Am2020-1914  0.282
2006 Chakrabarti L, Neal JT, Miles M, Martinez RA, Smith AC, Sopher BL, La Spada AR. The Purkinje cell degeneration 5J mutation is a single amino acid insertion that destabilizes Nna1 protein. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 17: 103-10. PMID 16465590 DOI: 10.1007/S00335-005-0096-X  0.269
2021 Klomp JE, Lee YS, Goodwin CM, Papke B, Klomp JA, Waters AM, Stalnecker CA, DeLiberty JM, Drizyte-Miller K, Yang R, Diehl JN, Yin HH, Pierobon M, Baldelli E, Ryan MB, ... ... Neal JT, et al. CHK1 protects oncogenic KRAS-expressing cells from DNA damage and is a target for pancreatic cancer treatment. Cell Reports. 37: 110060. PMID 34852220 DOI: 10.1016/j.celrep.2021.110060  0.257
2023 Ramezani M, Bauman J, Singh A, Weisbart E, Yong J, Lozada M, Way GP, Kavari SL, Diaz C, Haghighi M, Batista TM, Pérez-Schindler J, Claussnitzer M, Singh S, Cimini BA, ... ... Neal JT, et al. A genome-wide atlas of human cell morphology. Biorxiv : the Preprint Server For Biology. PMID 37609130 DOI: 10.1101/2023.08.06.552164  0.201
2004 Brady J, Neal J, Sadakar N, Gasque P. Human endosialin (tumor endothelial marker 1) is abundantly expressed in highly malignant and invasive brain tumors. Journal of Neuropathology and Experimental Neurology. 63: 1274-83. PMID 15624764  0.172
2022 Ursu O, Neal JT, Shea E, Thakore PI, Jerby-Arnon L, Nguyen L, Dionne D, Diaz C, Bauman J, Mosaad MM, Fagre C, Lo A, McSharry M, Giacomelli AO, Ly SH, et al. Massively parallel phenotyping of coding variants in cancer with Perturb-seq. Nature Biotechnology. PMID 35058622 DOI: 10.1038/s41587-021-01160-7  0.164
2022 Dietlein F, Wang AB, Fagre C, Tang A, Besselink NJM, Cuppen E, Li C, Sunyaev SR, Neal JT, Van Allen EM. Genome-wide analysis of somatic noncoding mutation patterns in cancer. Science (New York, N.Y.). 376: eabg5601. PMID 35389777 DOI: 10.1126/science.abg5601  0.147
2013 Neal JT. Column: Two-body blessing Nature. 501: 127. DOI: 10.1038/Nj7465-127A  0.146
2021 Hanna RE, Hegde M, Fagre CR, DeWeirdt PC, Sangree AK, Szegletes Z, Griffith A, Feeley MN, Sanson KR, Baidi Y, Koblan LW, Liu DR, Neal JT, Doench JG. Massively parallel assessment of human variants with base editor screens. Cell. 184: 1064-1080.e20. PMID 33606977 DOI: 10.1016/j.cell.2021.01.012  0.114
2014 de Kock L, Sabbaghian N, Plourde F, Srivastava A, Weber E, Bouron-Dal Soglio D, Hamel N, Choi JH, Park SH, Deal CL, Kelsey MM, Dishop MK, Esbenshade A, Kuttesch JF, Jacques TS, ... ... Neal J, et al. Pituitary blastoma: a pathognomonic feature of germ-line DICER1 mutations. Acta Neuropathologica. 128: 111-22. PMID 24839956 DOI: 10.1007/S00401-014-1285-Z  0.113
2022 Birceanu O, Ferreira P, Neal J, Sunga J, Anthony S, Davidson SM, Edwards SL, Wilson JM, Youson JH, Vijayan MM, Wilkie MP. Divergent Pathways of Ammonia and Urea Production and Excretion during the Life Cycle of the Sea Lamprey. Physiological and Biochemical Zoology : Pbz. 95: 551-567. PMID 36283107 DOI: 10.1086/721606  0.111
1995 Neal JT. Supai salt karst features: Holbrook Basin, Arizona Karst Geohazards: Engineering and Environmental Problems in Karst Terrane. Proc. 5th Conference, Gatlinburg 1995. 53-59.  0.086
2022 Ursu O, Neal JT, Shea E, Thakore PI, Jerby-Arnon L, Nguyen L, Dionne D, Diaz C, Bauman J, Mosaad MM, Fagre C, Lo A, McSharry M, Giacomelli AO, Ly SH, et al. Author Correction: Massively parallel phenotyping of coding variants in cancer with Perturb-seq. Nature Biotechnology. 40: 1691. PMID 36258042 DOI: 10.1038/s41587-022-01495-9  0.084
2014 Waite AJ, Bäumer D, East S, Neal J, Morris HR, Ansorge O, Blake DJ. Reduced C9orf72 protein levels in frontal cortex of amyotrophic lateral sclerosis and frontotemporal degeneration brain with the C9ORF72 hexanucleotide repeat expansion. Neurobiology of Aging. 35: 1779.e5-1779.e13. PMID 24559645 DOI: 10.1016/j.neurobiolaging.2014.01.016  0.066
2011 Pearson JP, Williams NM, Majounie E, Waite A, Stott J, Newsway V, Murray A, Hernandez D, Guerreiro R, Singleton AB, Neal J, Morris HR. Familial frontotemporal dementia with amyotrophic lateral sclerosis and a shared haplotype on chromosome 9p. Journal of Neurology. 258: 647-55. PMID 21072532 DOI: 10.1007/S00415-010-5815-X  0.059
2009 Wiegmann D, Suther T, Neal J, Parker SH, Sundt TM. A human factors analysis of cardiopulmonary bypass machines. The Journal of Extra-Corporeal Technology. 41: 57-63. PMID 19681301  0.057
1997 Neal JT, Magorian TR. Geologic site characterization (GSC) principles derived from storage and mining projects in salt, with application to environmental surety Environmental Geology. 29: 165-175. DOI: 10.1007/s002540050115  0.057
1997 Neal JT, Colpitts RM. Evaporite karst in the western part of the Holbrook Basin, Arizona The Engineering Geology and Hydrogeology of Karst Terranes. Proc. 6th Multidisciplinary Conference, Springfield, 1997. 107-115.  0.057
2023 Fowler DM, Adams DJ, Gloyn AL, Hahn WC, Marks DS, Muffley LA, Neal JT, Roth FP, Rubin AF, Starita LM, Hurles ME. An Atlas of Variant Effects to understand the genome at nucleotide resolution. Genome Biology. 24: 147. PMID 37394429 DOI: 10.1186/s13059-023-02986-x  0.054
1990 Neal JT, Tishk MN. The impaired dental practitioner: a dilemma requiring action. Missouri Dental Journal (Jefferson City, Mo.). 70: 20-1. PMID 2133913  0.053
1984 Sinnock S, Fernandez JA, Neal JT, Stephens HP, Hartway BL. METHOD FOR SCREENING THE NEVADA TEST SITE AND CONTIGUOUS AREAS FOR NUCLEAR WASTE REPOSITORY LOCATIONS Us Department of Energy, Technical Information Center, (Technical Report) Doe/Tic. 2: 3-22.  0.051
2011 Renton AE, Majounie E, Waite A, Simón-Sánchez J, Rollinson S, Gibbs JR, Schymick JC, Laaksovirta H, van Swieten JC, Myllykangas L, Kalimo H, Paetau A, Abramzon Y, Remes AM, Kaganovich A, ... ... Neal J, et al. A hexanucleotide repeat expansion in C9ORF72 is the cause of chromosome 9p21-linked ALS-FTD. Neuron. 72: 257-68. PMID 21944779 DOI: 10.1016/J.Neuron.2011.09.010  0.049
1997 Bauer SJ, Ehgartner BL, Neal JT. Geotechnical studies associated with decommissioning the strategic petroleum reserve facility at Weeks Island, Louisiana: a case study International Journal of Rock Mechanics and Mining Sciences & Geomechanics Abstracts. 34: 643. DOI: 10.1016/S1365-1609(97)00102-0  0.045
2022 Neal J, Hutchings PB, Phelps C, Williams D. Football and Dementia: Understanding the Link. Frontiers in Psychiatry. 13: 849876. PMID 35693952 DOI: 10.3389/fpsyt.2022.849876  0.043
2011 Heurich B, El Idrissi NB, Donev RM, Petri S, Claus P, Neal J, Morgan BP, Ramaglia V. Complement upregulation and activation on motor neurons and neuromuscular junction in the SOD1 G93A mouse model of familial amyotrophic lateral sclerosis. Journal of Neuroimmunology. 235: 104-9. PMID 21501881 DOI: 10.1016/j.jneuroim.2011.03.011  0.041
1995 Neal JT, Myers RE. Origin, diagnostics, and mitigation of a salt dissolution sinkhole at the US Strategic Petroleum Reserve storage site, Weeks Island, Louisiana Land Subsidence. Proc. International Symposium, the Hague, 1995. 187-195.  0.04
1997 Neal JT. Mine-induced sinkholes over the US Strategic Petroleum Reserve (SPR) storage facility at Weeks Island, Louisiana: geologic mitigation and environmental monitoring The Engineering Geology and Hydrogeology of Karst Terranes. Proc. 6th Multidisciplinary Conference, Springfield, 1997. 357-361.  0.04
1968 Neal JT, Langer AM, Kerr PF. Giant desiccation polygons of great basin playas Bulletin of the Geological Society of America. 79: 69-90. DOI: 10.1130/0016-7606(1968)79[69:GDPOGB]2.0.CO;2  0.039
2021 McAleese KE, Colloby SJ, Thomas AJ, Al-Sarraj S, Ansorge O, Neal J, Roncaroli F, Love S, Francis PT, Attems J. Concomitant neurodegenerative pathologies contribute to the transition from mild cognitive impairment to dementia. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. PMID 33663011 DOI: 10.1002/alz.12291  0.033
1995 Neal JT, Myers RE. Salt dissolution sinkhole at the Weeks Island, Louisiana, strategic petroleum reserve storage site Karst Geohazards: Engineering and Environmental Problems in Karst Terrane. Proc. 5th Conference, Gatlinburg 1995. 61-65.  0.028
1997 Neal JT, Colpitts RM. Richard Lake, an evaporite-karst depression in the Holbrook Basin, Arizona Carbonates and Evaporites. 12: 91-98.  0.026
2013 Garcia Pulido P, Neal J, Halpin S, Hamandi K. Multicentric oligodendroglioma: case report and review of the literature. Seizure. 22: 480-2. PMID 23528979 DOI: 10.1016/j.seizure.2013.02.018  0.018
2016 Skrobot OA, Attems J, Esiri M, Hortobágyi T, Ironside JW, Kalaria RN, King A, Lammie GA, Mann D, Neal J, Ben-Shlomo Y, Kehoe PG, Love S. Vascular cognitive impairment neuropathology guidelines (VCING): the contribution of cerebrovascular pathology to cognitive impairment. Brain : a Journal of Neurology. PMID 27591113 DOI: 10.1093/Brain/Aww214  0.018
2015 Saxena P, Neal J, Joyce LD, Greason KL, Schaff HV, Guru P, Shi WY, Burkhart H, Li Z, Oliver WC, Pike RB, Haile DT, Schears GJ. Extracorporeal Membrane Oxygenation Support in Postcardiotomy Elderly Patients: The Mayo Clinic Experience. The Annals of Thoracic Surgery. 99: 2053-60. PMID 25865760 DOI: 10.1016/j.athoracsur.2014.11.075  0.012
2022 Iyengar KP, Beale D, Neal J, Botchu R. Combined long head of biceps anchor avulsion with anterior dislocation of the shoulder: an unusual presenting injury. Bmj Case Reports. 15. PMID 36123008 DOI: 10.1136/bcr-2022-251457  0.01
2016 Skrobot OA, Attems J, Esiri M, Hortobágyi T, Ironside JW, Kalaria RN, King A, Lammie GA, Mann D, Neal J, Ben-Shlomo Y, Kehoe PG, Love S. Reply: Atherosclerosis and vascular cognitive impairment neuropathological guideline. Brain : a Journal of Neurology. PMID 28007988 DOI: 10.1093/Brain/Aww305  0.01
2002 Neal JT, Johnson KS. McCauley Sinks: A compound breccia pipe in evaporite karst, Holbrook Basin, Arizona, U.S.A Carbonates and Evaporites. 17: 98-106.  0.01
1998 Martinez JD, Johnson KS, Neal JT. Sinkholes in Evaporite Rocks American Scientist. 86: 38-51.  0.01
1966 Neal JT. Polygonal sandstone features in boundary Butte Anticline area, San Juan County, Utah: Discussion Bulletin of the Geological Society of America. 77: 1327-1330. DOI: 10.1130/0016-7606(1966)77[1327:PSFIBB]2.0.CO;2  0.01
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