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Saharon Rosset, Ph.D. - Publications

Affiliations: 
2003 Stanford University, Palo Alto, CA 
Area:
Statistics and Biostatistics (HRP)
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41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Hastie T, Montanari A, Rosset S, Tibshirani RJ. SURPRISES IN HIGH-DIMENSIONAL RIDGELESS LEAST SQUARES INTERPOLATION. Annals of Statistics. 50: 949-986. PMID 36120512 DOI: 10.1214/21-aos2133  0.46
2020 Abadi S, Avram O, Rosset S, Pupko T, Mayrose I. ModelTeller: model selection for optimal phylogenetic reconstruction using machine learning. Molecular Biology and Evolution. PMID 32585030 DOI: 10.1093/Molbev/Msaa154  0.332
2020 Fisher E, Schweiger R, Rosset S. Efficient Construction of Test Inversion Confidence Intervals Using Quantile Regression Journal of Computational and Graphical Statistics. 29: 140-148. DOI: 10.1080/10618600.2019.1647215  0.319
2020 Rabinowicz A, Rosset S. Cross-Validation for Correlated Data Journal of the American Statistical Association. 1-14. DOI: 10.1080/01621459.2020.1801451  0.337
2020 Rosset S, Tibshirani RJ. From Fixed-X to Random-X Regression: Bias-Variance Decompositions, Covariance Penalties, and Prediction Error Estimation Journal of the American Statistical Association. 115: 138-151. DOI: 10.1080/01621459.2018.1424632  0.323
2019 Tibshirani RJ, Rosset S. Excess Optimism: How Biased is the Apparent Error of an Estimator Tuned by SURE? Journal of the American Statistical Association. 114: 697-712. DOI: 10.1080/01621459.2018.1429276  0.308
2019 Painsky A, Rosset S. Lossless Compression of Random Forests Journal of Computer Science and Technology. 34: 494-506. DOI: 10.1007/S11390-019-1921-0  0.303
2018 Schweiger R, Fisher E, Weissbrod O, Rahmani E, Müller-Nurasyid M, Kunze S, Gieger C, Waldenberger M, Rosset S, Halperin E. Detecting heritable phenotypes without a model using fast permutation testing for heritability and set-tests. Nature Communications. 9: 4919. PMID 30464216 DOI: 10.1038/S41467-018-07276-W  0.316
2018 Levinstein Hallak K, Tzur S, Rosset S. Big data analysis of human mitochondrial DNA substitution models: a regression approach. Bmc Genomics. 19: 759. PMID 30340456 DOI: 10.1186/S12864-018-5123-X  0.314
2018 Weissbrod O, Flint J, Rosset S. Estimating SNP-Based Heritability and Genetic Correlation in Case-Control Studies Directly and with Summary Statistics. American Journal of Human Genetics. 103: 89-99. PMID 29979983 DOI: 10.1016/J.Ajhg.2018.06.002  0.34
2018 Schweiger R, Fisher E, Rahmani E, Shenhav L, Rosset S, Halperin E. Using Stochastic Approximation Techniques to Efficiently Construct Confidence Intervals for Heritability. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. PMID 29932739 DOI: 10.1089/Cmb.2018.0047  0.36
2018 Painsky A, Rosset S, Feder M. Linear Independent Component Analysis Over Finite Fields: Algorithms and Bounds Ieee Transactions On Signal Processing. 66: 5875-5886. DOI: 10.1109/Tsp.2018.2872006  0.321
2017 Schweiger R, Weissbrod O, Rahmani E, Müller-Nurasyid M, Kunze S, Gieger C, Waldenberger M, Rosset S, Halperin E. RL-SKAT: An Exact and Efficient Score Test for Heritability and Set Tests. Genetics. PMID 29025915 DOI: 10.1534/Genetics.117.300395  0.322
2017 Weissbrod O, Rahmani E, Schweiger R, Rosset S, Halperin E. Association testing of bisulfite-sequencing methylation data via a Laplace approximation. Bioinformatics (Oxford, England). 33: i325-i332. PMID 28881982 DOI: 10.1093/Bioinformatics/Btx248  0.354
2016 Painsky A, Rosset S. Cross-Validated Variable Selection in Tree-Based Methods Improves Predictive Performance. Ieee Transactions On Pattern Analysis and Machine Intelligence. PMID 28114007 DOI: 10.1109/Tpami.2016.2636831  0.34
2016 Weissbrod O, Geiger D, Rosset S. Multikernel linear mixed models for complex phenotype prediction. Genome Research. PMID 27302636 DOI: 10.1101/Gr.201996.115  0.35
2016 Schweiger R, Kaufman S, Laaksonen R, Kleber ME, März W, Eskin E, Rosset S, Halperin E. Fast and Accurate Construction of Confidence Intervals for Heritability. American Journal of Human Genetics. 98: 1181-92. PMID 27259052 DOI: 10.1016/J.Ajhg.2016.04.016  0.341
2016 Painsky A, Rosset S. Isotonic Modeling with Non-Differentiable Loss Functions with Application to Lasso Regularization. Ieee Transactions On Pattern Analysis and Machine Intelligence. 38: 308-21. PMID 26761736 DOI: 10.1109/Tpami.2015.2441063  0.345
2016 Painsky A, Rosset S, Feder M. Generalized Independent Component Analysis Over Finite Alphabets Ieee Transactions On Information Theory. 62: 1038-1053. DOI: 10.1109/Tit.2015.2510657  0.315
2014 Golan D, Lander ES, Rosset S. Measuring missing heritability: inferring the contribution of common variants. Proceedings of the National Academy of Sciences of the United States of America. 111: E5272-81. PMID 25422463 DOI: 10.1073/Pnas.1419064111  0.362
2014 Golan D, Rosset S. Effective genetic-risk prediction using mixed models. American Journal of Human Genetics. 95: 383-93. PMID 25279982 DOI: 10.1016/J.Ajhg.2014.09.007  0.344
2014 Kaufman S, Rosset S. Exploiting population samples to enhance genome-wide association studies of disease. Genetics. 197: 337-49. PMID 24614931 DOI: 10.1534/Genetics.114.162511  0.354
2014 Luss R, Rosset S. Generalized Isotonic Regression Journal of Computational and Graphical Statistics. 23: 192-210. DOI: 10.1080/10618600.2012.741550  0.34
2014 Painsky A, Rosset S. Optimal Set Cover Formulation for Exclusive Row Biclustering of Gene Expression Journal of Computer Science and Technology. 29: 423-435. DOI: 10.1007/S11390-014-1440-Y  0.323
2013 Behar DM, Metspalu M, Baran Y, Kopelman NM, Yunusbayev B, Gladstein A, Tzur S, Sahakyan H, Bahmanimehr A, Yepiskoposyan L, Tambets K, Khusnutdinova EK, Kushniarevich A, Balanovsky O, Balanovsky E, ... ... Rosset S, et al. No evidence from genome-wide data of a Khazar origin for the Ashkenazi Jews. Human Biology. 85: 859-900. PMID 25079123 DOI: 10.3378/027.085.0604  0.308
2013 Golan D, Rosset S. Statistical modeling of coverage in high-throughput data. Methods in Molecular Biology (Clifton, N.J.). 1038: 61-79. PMID 23872969 DOI: 10.1007/978-1-62703-514-9_4  0.34
2012 Wasser WG, Tzur S, Wolday D, Adu D, Baumstein D, Rosset S, Skorecki K. Population genetics of chronic kidney disease: the evolving story of APOL1. Journal of Nephrology. 25: 603-18. PMID 22878977 DOI: 10.5301/Jn.5000179  0.312
2012 Gymrek M, Golan D, Rosset S, Erlich Y. lobSTR: A short tandem repeat profiler for personal genomes. Genome Research. 22: 1154-62. PMID 22522390 DOI: 10.1101/Gr.135780.111  0.325
2012 Sarig O, Bercovici S, Zoller L, Goldberg I, Indelman M, Nahum S, Israeli S, Sagiv N, Martinez de Morentin H, Katz O, Baum S, Barzilai A, Trau H, Murrell DF, Bergman R, ... ... Rosset S, et al. Population-specific association between a polymorphic variant in ST18, encoding a pro-apoptotic molecule, and pemphigus vulgaris. The Journal of Investigative Dermatology. 132: 1798-805. PMID 22437316 DOI: 10.1038/Jid.2012.46  0.314
2012 Luss R, Rosset S, Shahar M. Efficient regularized isotonic regression with application to gene–gene interaction search The Annals of Applied Statistics. 6: 253-283. DOI: 10.1214/11-Aoas504  0.38
2012 Kaufman S, Rosset S, Perlich C, Stitelman O. Leakage in data mining: Formulation, detection, and avoidance Acm Transactions On Knowledge Discovery From Data. 6. DOI: 10.1145/2382577.2382579  0.325
2012 Hooker G, Rosset S. Prediction-based regularization using data augmented regression Statistics and Computing. 22: 237-249. DOI: 10.1007/S11222-010-9220-1  0.343
2011 Rosset S, Tzur S, Behar DM, Wasser WG, Skorecki K. The population genetics of chronic kidney disease: insights from the MYH9-APOL1 locus. Nature Reviews. Nephrology. 7: 313-26. PMID 21537348 DOI: 10.1038/Nrneph.2011.52  0.319
2009 Lozano AC, Abe N, Liu Y, Rosset S. Grouped graphical Granger modeling for gene expression regulatory networks discovery. Bioinformatics (Oxford, England). 25: i110-8. PMID 19477976 DOI: 10.1093/Bioinformatics/Btp199  0.345
2009 Hastie T, Rosset S, Zhu J, Zou H. Multi-class AdaBoost Statistics and Its Interface. 2: 349-360. DOI: 10.4310/Sii.2009.V2.N3.A8  0.581
2008 Rosset S, Wells RS, Soria-Hernanz DF, Tyler-Smith C, Royyuru AK, Behar DM. Maximum-likelihood estimation of site-specific mutation rates in human mitochondrial DNA from partial phylogenetic classification. Genetics. 180: 1511-24. PMID 18791242 DOI: 10.1534/Genetics.108.091116  0.324
2007 Behar DM, Rosset S, Blue-Smith J, Balanovsky O, Tzur S, Comas D, Mitchell RJ, Quintana-Murci L, Tyler-Smith C, Wells RS. The Genographic Project public participation mitochondrial DNA database. Plos Genetics. 3: e104. PMID 17604454 DOI: 10.1371/Journal.Pgen.0030104  0.314
2007 Rosset S. Efficient inference on known phylogenetic trees using Poisson regression. Bioinformatics (Oxford, England). 23: e142-7. PMID 17237083 DOI: 10.1093/Bioinformatics/Btl306  0.355
2007 Lawrence R, Perlich C, Rosset S, Arroyo J, Callahan M, Collins JM, Ershov A, Feinzig S, Khabibrakhmanov I, Mahatma S, Niemaszyk M, Weiss SM. Analytics-driven solutions for customer targeting and sales-force allocation Ibm Systems Journal. 46: 797-816. DOI: 10.1147/Sj.464.0797  0.307
2004 Efron B, Hastie T, Johnstone I, Tibshirani R, Ishwaran H, Knight K, Loubes JM, Massart P, Madigan D, Ridgeway G, Rosset S, Zhu JI, Stine RA, Turlach BA, Weisberg S. Least angle regression Annals of Statistics. 32: 407-499. DOI: 10.1214/009053604000000067  0.56
2004 Rosset S, Zhu J. Corrected proof of the result of 'A prediction error property of the Lasso estimator and its generalization' by Huang (2003) Australian New Zealand Journal of Statistics. 46: 505-510. DOI: 10.1111/J.1467-842X.2004.00347.X  0.329
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